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        MIRSI Operator`s Guide - Harvard-Smithsonian Center for Astrophysics
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1.                    4 da                                          a a            HEN    EJ AE 4 d       0                                                1                   233                                            ICH   2 M                                                    uc                                                                      E        A            22                 IE              E          5  pi           18    rn Ground  SESESECESESESE E EN       DEWAR SIDE   ITT Cannon 4 Amphenol   32 pin connector 4 pin connector  MS3116F18 32S 97 3101A 14S     2P  w  stress relief  97 3057 1007       1 foot 4 conductor  16 gauge cable  w braided shield  ALPHA    MIRSI Operator   s Guide    Peripheral components    4 Amphenol   4 pin connector  97 3106   145   25   w  stress relief  97 3057 1007    PIN OUT       20 ft 4 conductor  16 gauge cable  w  braided shield  ALPHA    4 Harting PHYTRON BOX  8 pin connectors   Han D7 pin male   insert   Hoods 09 20 003 042   0   Strain Relief  Olflex   Cable       X11W N    MOTOR 1    MOTOR 2    MOTOR 3    MOTOR 4    8     ground    MIRSI Operator s Guide    20     2 twisted pair  28 Gauge  braided shield    1 ft      twisted pair  20 Gauge   braided shield       DEWAR SIDE  ITT Cannon   26 pin connector  MS3116F16 26S    Amphenol   6 pin connector  97 3101 A 14S   6P   w  stress relief  97 3057 1007  PIN OUT        Amphenol   18 pin miniature  connector            14 18       A    1 ft  8 twisted pair    28 Gauge  braided s
2.               BER AUGE                      EU as 23    3 9 2 Operation of temperature controller epi             Hahn 24    3 9 3 Operation of temperature                                          SS 24  39 4 Temperature LOR IT rl e 24                           T                                                                     25  SAD Secondary                                            do datos 25  3 102  Balan E                          de 25  4  OPERATING MIRS sarao iii dan Sri ARTIS EH IN OR NURSE PENSA           kishia 26  5  OBSERVING  AA O 28  5 1 Telescope interface    IRTE                     noU Xe be ERE e Polo reru pha                          28  5 1 1 Sending commands to the Telescope Control System          28  2 12  C HODBIBE iii doo cte                                        EE MED UEM    IU 28  5 1 3                                                                      aR 29  Sul dC OU QUOD                                                       CE EAR 29  a Wists islet ie  Bleeker a                                        29  5 1 6 Standard stars    euet a ein 30  5 1 7 Telescope offsets  and dither mosaic procedures    nn                              Ra 30  82              A A 30  MIRSLOBSERVING                           aros 31  MIRSI SETUP u a rc        AN e Ural 32  MIRSECRYOGEN LOG         34  LOS END OF RUN TASKS ep 35  APPENDIN A MEME 36                                                   22552256    ponet EIS en              ANE aou 37  MIRSI NIGHTLY O
3.             gt   LP              5 3  AR 3    en al              gt  Uu     gt  gt   zo                        pr     f  aya  dH                      5  AM 3  AL 5  AL 5  AK 3       5  AI 5       5  AH 3  AGS  AG 3  AE 3  BG  1  BF  1                     a m  SEN BIS Biro als e   jaj          5                  Sjo    9 9     gt   gt  gt  WW Siw  gt  gt          Bu  a    26  27  28  29  30  31  34  35  36  37  38    BE  3                 eS EN   aJo          oo  ar                         P   gt                              a    INS     alo         Ss 8  OJO                wojo w          OJO O            R    EE             gt         ala        PIL  gt     zg zZ                   gt          gt   gt   gt   ojo I      co        TE                      NYO       68    96 Pin  backplain  29B    power supply  Alcopian   Out    14  18  22   Takt1 3  amp   Takt4  grounds    power supply  Alcopian  wire wrapped to  amp  25       p  5 out  17 Takt1 3    4 Takt1 3    21 Taktt 3    8 Takt1 3    25 Takt1 3    12 Takt1 3    17 Takt4    4   Takt4    2C    MIRSI Operator s Guide    Chop driver board    Leach Box Chop and Nod  Fiber Optic Output Board         ul     31 from 96 Pin 78  15  pl OUTle e   cz  6 297              con 2  Agilent        Agilent Transmitter         U     HEBR 1414T                HEBR 1414T       C28 from 96 Pin 111085       OUT E  10      ES col N su     A25 from 96 Pin      Status      A28 from 95 Pin    AS from 95 Pin    MIRSI Operator s Guide    BNC chop box  
4.         13  Case 7     4                                                                                  esas 13    2 5 Suggested shipping crate labels and orientation markers                                1         eere                                           13  3 1 Unpacking and inspection iocus cre                                         3 2 Host Conipuler T                                                     18    3 3 System Check oo      PRENNE LD       MIOS          a s A doe Sah ad    19                                      19    3 4 Dewar evacuation using vacuum                                     2           sese ense essa seen ease esa sees so sees osse es                                          19    3 5 600100   2                                                                                                                                    20                              e AAA      20  3 32 He cold WA              20    3 6 MOUN                                                                        20    3  Camera  Electronicos                                                                                                       UL  Sv d Blectromiesselupe ra a                                             UE dut 21  3 7 2 Source Follower  Gain 1  amp  erre eee                              stre het                          22    3 8  Motor Control Syste REA    3 9 Temperature Controls  extr OR DNI RIS E avt RR RI 20              ore DUNT                      
5.       CHOP LOW   Idle frames  m    The frame and chop parameters can be set from the host program using the following manual DSP  commands    SNC   Set number of coadds for the exposure    SET   Set exposure time  i e  the frame time in integer number of expose clock cycles     In grab mode  the total on source time is determined by N coadd x Frame time  The total acquistion time  is determined by     coadd x  Frame  time   Global reset   Post reset delay   Readout  time      SCC   Set chop command  0   grab mode  1   chop mode     SFC    Set frames per chop  number of frames on source per chop cycle    SCW   Set chop wait  number of idle frames clocked between chop levels    SNL   Set nod level  0   beam A  1   beam B   sets DSP nod bit to desired level  not used at IRTF      From this scheme  the total amount of time to acquire the exposure can be calculated  Since the frames are  readout out in integer numbers  the exact value of acquisition time and chop parameters will be the sum of  integer frame times  expose and idle   The mirsi host program makes these calculations when the user  enters the observing parameters     portable program  mpars c  is available in  home camera  This  program can be compiled using the UNIX command gcc     mpars mpars c  Afterwards  type mpars to  see the usage options     The programs first compute the number of frames per chop        SFC   l     SCW x Idle _ frame  time    Total _ frame _ time  2 Chop _ frequency     where Total_frame_time 
6.   Agilent Receiver    HFBR 2616T  r5 y     5 V            Be    05    0574451 RT  5 v    390  o  Agilent Receiver N  Red RA            261 6   390   5 V C Green  R9 45v  390        7451400    BNC Chopk 1    
7.   Frame_time   Global_reset   Post reset_delay   Readout_time  The total  acquistion time is then   2   N _coadd x SFCxTotal frame time   SCW x Idle _ frame time     Total   acquisition time    SFC       and the total on source time is still N_coadd x Frame  time     The controller has only modes for grab and chop  The host program has the controller treat a nod set like  two separate exposures  Thus  when in nod mode  the acquistion time is double the grab or chop    MIRSI Operator s Guide  acquisition time  The host program then writes a nod set as a single FITS file with up to 3 FITS  extensions     MIRSI Operator s Guide    SYSTEM TAPE BACKUP    To backup the MIRSI host PC  use a 12 GB 4mm DAT tape  20 GB is too large   There is a backup script  to assist with the system tape backup procedure in  home root backup  The directories to be backed up  include  home   opt  and  mirsil  If space permits  also backup  mirsi2  To run the script       Log in as root      Type cd  home root backup      Is to see the date of last backup      Check the MIRSI lab notebook for that date to see which tape  A or B  was used  and insert the alternate  tape  if funding allows  a better scheme is to use a new tape for each backup date     e Edit the backup script to include  mirsil and or  mirsi2 depending      data backup status and space  available  Edit the e mail address in the script where the notification message is sent        Type   backup      The backup script will start and automa
8.  1    small  10    medium      or large  60        custom dither pattern of an arbitrary number of steps can be created in a file with 2 columns of offset  e g   example off  Note the last two rows are 0 0 0 0      5 0 0 0    5 0 5 0   0 0 10 0   0 0    5 0   5 0 5 0   10 0 0 0   0 0 0 0   0 0 0 0    and subsequently uploaded by the host software  The directory for offset files is currently   home camera Offsets     Automated mosaic patterns are available as 2x2  3x3  or 4x4 field patterns  The current default field of   view is 60   There is an option to load a custom mosaic file analogous to a custom dither file     Once the observing parameters and dither and or mosaic patterns are specified  simply click Expose to  start the sequence  then sit back  relax and enjoy the show     5 2 Log sheets    The following sheets were created to assist in the planning  execution  and documentation of MIRSI  observations and cryogen usage  The Observing Plan sheet is optional  but please use the setup  observing  log  and cryogen log sheets whenever observing with MIRSI     30    Site   Date     Latitude     MIRSI OBSERVING PLAN    Longitude        Local  time    UT  time    Sidereal  time    Observer    Object  name    Type     epoch       DEC    Airmass       15 00       15 30       16 00       16 30       17 00       17 30       18 00       18 30       19 00       19 30       20 00       20 30       21 00       21 30       22 00       22 30       23 00       23 30       00 00       0
9.  inserted where the PEM stud goes through the  bracket  with the flat part flush along the top of the bracket  Secure the PEM studs with 14 20 lock nuts    e Attach the upper bipods to the mount plate using the 72 20 bolts and lock washers      Use a mechanical lift to bring the mount plate and bipods up to the MIM interface  Bolt the mount plate  to the MIM using the asymmetrical bolt hole pattern with 12 20 bolts and lock washers  The directional  orientation should be marked on the plate  if not  refer to drawings for correct orientation      Use the mechanical lift to raise the dewar up to the lower bipods  Be sure the small mount block is  attached and pinned to the dewar between the fill ports  Attach the dewar to the bipods using 12 20 bolts  and lock washers     3 7 Camera Electronics    WARNING  Always use anti static mats and grounding straps whenever    touching the electronics box or dewar connectors and cables        3 7   Electronics setup  The electronics should be set up using the following procedure     e After unpacking  open the Leach electronics box and reseat all boards and connectors      Connect the Leach power supply to the Leach electronics box      Connect the electronics box to the host PC using a dual fiber optic cable      Connect the chop signal from the electronics box to the chop drive box using a fiber optic cable  At  IRTF  the nod signal is left open  the host program sends nod commands to the telescope control system  over the network      
10.  issues a Camera Power On  command  The best value for VDETGRV was determined to be where the signal to noise peaks as     function of VDETGRV  The bias voltage across the detectors is VGATE HIGH     VDETGRV   V  thresh  where V  thresh is a diode threshold across the gate  about 1 3 V     PROBLEM  Sometimes the software does not set the values and instead does nothing  If when you  expose  you observe sky levels of  10 000 counts no matter what frame time is set  reapply the Set  Detector Voltages     12  From the Session menu  open the Target  amp  Observer Info window  Select the site and enter the  observer and target object information    13  From the Display menu  select the desired display mode  difference  pattern remove  coad  tile   single     14  In the main window  click Expose to start an exposure  Note  DO NOT Abort during an exposure   only between multiple exposures  If display image is selected  then when the exposure is finished   mirsi will automatically display the image in the ds9 window  in the selected display mode  For  multiple exposures  mirsi will automatically display each image after acquisition     27    5  OBSERVING WITH MIRSI    5 1 Telescope interface at IRTF    5 1 1 Sending commands to the Telescope Control System    The MIRSI host software can send commands directly to the IRTF telescope control system over the  network  The IRTF program tcsio is used for this task  tesio is installed on the host PC in the directory   usr local bin     Some
11.  sample commands with tcsio are     tcsio ABEAM Nod to beam A   tcsio BBEAM Nod to beam B     tcsio ra offset  asec  dec offset  asec  OFFSET Send arcsecond offsets to the  telescope     tcsio 0 0 0 0 0 1       The nod beams are by the telescope control system  For more information  see the telescope operator or  other IRTF staff member     5 1 2 Chopping    The chop throw is set by IRTF staff  At IRTF  chop rates should be tuned to avoid resonance frequencies  of the secondary mirror  8     9 Hz or so   The IRTF chopper should be set to Ext  External  when using  MIRSI     Larger chop throws require large chop waits     When in chop mode  the MIRSI electronics generate a binary chop signal bit from the Leach timing board   pin named H4  otherwise known as STATUSO   This chop signal is buffered on a separate chop drive  board and converted to an optical signal by an LED source  The optical signal is carried outside the Leach  box by fiber optic cable to an independently powered chop driver box  The chop driver box converts the  optical signal into a TTL signal with BNC output  A BNC cable should be used at the IRTF to carry the  signal from the driver box to the chop bit input of the telescope control system     When chop mode is selected in the MIRSI host program  the timing software will automatically control  the beam switching using the chop bit  Chop rates are limited by the speed of the array readout  The host  program will convert the desired chop parameters into integ
12. 0 30       01 00       01 30       02 00       02 30       03 00       03 30       04 00       04 30       05 00       05 30       06 00       06 30       07 00       07 30          08 00                                  MIRSI SETUP    Date      Data directory  Site Gain     e ADU Readout noise    e  Pixel scale     pix    FOV  x    Chop wait ms  Nodwait 5                       0    ADU          File   Time      Frame Chop Sky level  ADU  Overhead Ratio  total Comments  No    UT  um  time  ms    freq  Hz     Blank subtract  time   on source time        22       4 9       7 8  8 7       9 8       N band       10 3 MLOF       11 6       12 282       12 5       18 5       20 9       25 9       CVF short       CVF mid       CVF long       Grism 7 14          Grism 18 26                               MIRSI OBSERVING LOG Page           Date UT EEE 2  Data directory _ _            File Time   Object    Frame   Exp  Mode   Chop Offset Airmass   Comments   No  UT um   time Time            freq file  off  Purpose  Focus  FWHM  dither  throw    ms   s  N CN    Hz  weather  etc                                                                                               MIRSI CRYOGEN LOG    DATE TIME TIME MIRSI MIRSI Storage Dewar Storage Dewar Liters  mo day year   Cryogen Begin Fill End Fill Level Before Level After Level Before Level After Used Comments       AO                           ISS            AAA    15     10     17   18   10     20     21   22   23     24   29   26   27   2
13. 8   29   30   31     32     E EA IDEE    MIRSI Operator s Guide    6  END OF RUN TASKS    Here is a check list for necessary tasks at the end of an observing run  Mostly  the shutdown procedure is  simply the reverse of the setup procedure  It will take three people about two hours to complete these  tasks     In the host software  deselect the Camera Power on    Home the all three filter wheels    Exit the host software    Backup all data onto tape and or a remote machine    Install the dessicant trap    Power down the Leach power supply    Power down the motor control box  temperature controller  and temperature monitor   Don wrist strap    Remove clocks cable from the dewar    Install a grounding cap on the dewar s 61 pin clock signals connector       Remove the signal cable from JFET box     Remove the JFET box from the dewar    Install a grounding cap on the dewar s 46 pin readout signals connector    Disconnect all cables from the Leach box and insert the 37 pin shorting plug in the 37 pin readout  signals connector on the Leach box    Disconnect the fiber optic cables for the Leach electronics and the chop nod driver box  Coil and safely  set aside the fiber optic cables    Disconnect the temperature controller cable  temperature monitor cable  home switch cable  and motor  drive cables and pigtails on both sides  Set all cables aside    Insert grounding plugs into the 26 pin housekeeping and motor drive connectors on the dewar   Disconnect all power cords from the per
14. BSERVING CHECK 1    18                                                                                                     38  Cieneral Star Up A O           38  O    ME ER aiu EE t          Aa    a 38  MIRSI TROUBLESHOOTING                                                                                                                                    39  TIMING SCHEME CONCEPT  EXPOSURE PARAMETERS  AND IMAGE ACQUISITION TIME                           Lr                             42  SYSTEM TAPE BACKUP nieta idad                             45  WIRING DIAGRAMS nadal cus EUM OS            46  Electronics Box to boards wiring unse                          lo ii 40  CONTROLLER BOX            30 0 5  0  3 5      o          47  JEET  cutrenp A                                     Lt O              48  Peripheral components    dans                      49  Chop driver board                                                        55  BING CHO py BOX ue                                                       eee    56    1  INTRODUCTION    1 1 MIRSI overview        purpose of this manual    MIRSI is a mid infrared spectrometer and imager that has been designed for operation at the NASA  Infrared Telescope Facility  IRTF   on Mauna Kea  Hawaii  Its sensitivity at mid infrared wavelengths  and multiple capabilities make it a state of the art tool for the study of star formation processes in the  Milky Way  planetary nebulae  young stellar objects  circumstellar dust  and solar system ob
15. COL  37 VSUB  wired    Vdd1  Vdd2   amp  Vdd3  38 VCAP   39 VOFFSET  40 VEN2TOI    10 CLOCK GROUND  26 DCBIAS GROUND    12 ROWSTRT   13 RRESTRT   14  RCLKI   15 RCLK2   16 ROWEN   17 RSTROW  28 CLCOL  29 VGGCL  30 SH   31 SHPCHG  32 CLOUT  33 VGATE  45 VGG1   46 COLSTRT  47 CCLK1  48 P2TOI   49 CCLK2  50 P1TO2    42 OUTPUT BIAS   11 CLOCK SHIELD  27 CLOCK SHIELD  44 CLOCK SHIELD    DB 9 Male  1 amp 2    4 amp 5  6 9    CLOCK DRIVER BOARDS  DB 37 Female  CLOCK DRIVER  0 CLOCK DRIVER  1       0   3       gt                33   not attached    22  notattached  22  notattached    35  not attached    22   25     MIRSI Operator s Guide    JFET current source box       41        female JFET Current 38        female to Signals cable  from dewar Source Box sigaals cable 38        male 27        female  B W    20  x                     8      1  d  gt               2  B D 0       22  t  2    E           23  Free d E Il  E     A     lta  LL 2 2    acLI TTL      zu                               i 5                                   x   mmis  SEE RC                                                     cmm   gt                               A a   gt   uL             ne                   ES   LIJOLT UT s   6                                                    m                                  T i 9        Vin                                               j 30                                                             t  SLT Ton Y s a  A AA        5  5 th is s   5  ELI JI LL                 
16. Connect the 37 pin readout signal cable to the Leach box and secure      Connect the 50 pin clocks cable to the Leach box and secure      Connect the readout cable to the JFET box      Remove the 41 pin grounding connector from the dewar      Connect the JFET box to the dewar        Remove the 61 pin grounding connector from the dewar      Connect the clocks cable to the dewar     21    3 7 2 Source Follower Gain test    If running the detector chip for the first time since shipping  the MIRSI observing team should perform the  source follower gain  SFG  test  The SFG test measures the response of the readout system from the pixels  to the host PC by manipulating an artificial signal      the pixels  The detectors are    turned off  during this  measurement  which allows the measurement to be made when the detector is at room temperature as well  as LHe temperature      WARNING  This test should only be performed by a trained MIRSI team  member  No guest observer should ever change the array voltages without    explicit guidance from a team member          Boot the host software       Load the timing file  home camera software SOURCE clkvrstuc tim lod       Take a few images and note the overall level of counts      From the Setup menu  open the Bias and Clock Voltages window and select the one on the Clock  Voltages LOW column for VRSTUC  Enter    2 5 and press Update Selected        Take a few more images  The counts should increase by several thousand  depending on the des
17. MIRSI Operator s Guide    9 LHe cooled work surface suddenly heats up to above 7 K  A sudden increase in the temperature of  the work surface may indicate one of the following problems     LHe reservoir is depleted   refill    Motor currents have been left on  To turn them off  immediately press the INIT button in the host  program    Vacuum leak in the dewar  Other symptoms of a vacuum leak include condensation and frost present  on the exterior of the dewar  If the latter symptom is present  blow out the cryogens and put the dewar  on the vacuum pump    Stage heater 18 running     MIRSI Operator s Guide    TIMING SCHEME CONCEPT  EXPOSURE PARAMETERS   AND IMAGE ACQUISITION TIME    This section of the Appendix contains concept diagrams for the MIRSI global detector timing scheme and  the calculation of total exposure time for a given set of frame parameters  MIRSI   s timing scheme  incorporates aspects of both Raytheon timing schemes  Integrate then read  and Integrate while read  The  beauty of the CRC 774 Readout Integrated Circuit  ROIC  is that it can be operated in several different  Ways  depending on the needs of the user  The timing scheme for MIRSI currently consists of a             destructive  readout  NDR   This entails a global reset of the array  all pixels addressed and set to their  reset value   followed by integration  VGATE toggled to its high value   During integration  the  multiplexer is clocked  rows and pixels addressed in the usual sequence   but th
18. Version  2004 01 22    Operator s Guide       Joseph D  Adams  amp  Marc Kassis    Boston University  Institute for Astrophysical Research    Lynne K  Deutsch  amp  Joseph L  Hora    Harvard Smithsonian Center for Astrophysics    Table of Contents    1 1 MIRSI overview and purpose of this manual                              eee e eese eee ee                    seen ease eo                     sese es             4  1 2 MIRSI personnel contact info                            ss  e  eeeeeeeeeeeeeeeeee                                                                D  1 3 Engineering vendor contactsS                      ss ssseseseeeeeeeeee e                                                                               2  PREPARING MIRSI FOR AN OBSERVING                                                                   8  21 IRTF contact                                                       2 Cryopgens at IRTE                                                                     2 3  Timescale  guidelines                                                                                                           2 4 Packing inventory and weight distribution                                                                                                          Y  Case  gt   185 IDS En et Nene ER m Ed enti      tt Need 10           2160165  ET 10             3   1201  86055                                                       Sn bn vitis 10  Case ERR 11  Case   TSO rmn 12  Case 0    
19. ats the inside  of the dewar and boils off precious LHe and observing time  Turn the    motor currents off by immediately executing the INIT command from  the host software  see  4         3 9 Temperature Control    3 9 1 Setup    MIRSI currently contains four silicon diode temperature sensors made by Lakeshore Cryogenics  one on  the rear of the cold finger which cools the detector  one on the upper rear of the detector fanout board near  the MDM connections  one on the interior lip of the 77 K shield near the back plate  where the optics box    23    can be opened   and one similarly on the interior of the floating shield  These sensors provide precision  temperature measurements  To read these sensors  the set up steps are the following       Connect the Lakeshore 321 temperature controller cables from the  housekeeping  color coded pigtailed  cable to the controller s 6 pin sensor input and dual BNC jack for the heater output current  The LOW  side of the BNC connector is marked      Connect the Lakeshore 208 temperature monitor s 25 pin input to the pigtailed cable using the  temperature monitor cable      Connect the pigtail to the dewar s 26 pin connector  As usual  all cables should be stress relieved       nstall power cables on the controller monitor to standard power outlet        If disconnected  connect the 25 pin serial port A on the host PC to a null modem on the DATAPROBE  input port      Connect the 8 line gray serial line between the controller s serial I O 
20. ched and the cold shutter is open during vacuum  pumpout  Bring the camera into the prep room  the room containing the vacuum pump and cryogens    Open the other crates and inspect the contents for damage    Unpack the temperature monitor  temperature controller  and associated cables  Connect them to the  dewar and ensure the temperature sensors are reading appropriate values  Begin recording temperatures   If time permits  unpack the host computer  Check for loose parts  and adjust if necessary  Boot the host  computer and connect to the network    Again  if time really permits  connect the serial interface to the host computer and to the temperature  monitors controller  Boot the host software and begin the temperature log  Otherwise  temperatures can  be recorded manually in the MIRSI lab notebook    Connect the dewar vacuum valve to the vacuum pump  Begin pump out    Check that the  L shaped  mount electronics support bracket interface plate is attached to the dewar   optics box face     Attach the electronics support bracket to its interface plate    Attach the Leach electronics box to the electronics support bracket    Open Leach box and reseat all boards and connectors       When the dewar reaches sufficiently low pressure  10  to 10  Torr   first close the dewar valve  then    turn the pump off  After the pump winds down  vent the pump line and disconnect the pump line from  the dear valve  Attach the NW 40 safety cap to mouth of the dewar valve    Close the cold shu
21. cking requires      Open the CPU case  and ensure that the boards  wires  connectors  drives are secured  Be sure that there  are no loose screws floating in any of the computer device cases      Open the Leach electronics box  Gently reseat all boards and connectors  even if they visually appear  secure     3 2 Host Computer    Unpack the host PC computer  Before power up  please open the CPU case and look for loose boards   cables  wires  or free floating screws  etc  Also  inspect the monitor for possible damage  These quick  checks will help to prevent irreparable damage to the computer if something became amiss during  shipping     Once the host PC is booted  connect it to the network by doing the following  or just run the script  described below        Log in as root      Make copies of  then edit the files    etc hostname hme0   etc defaultrouter   etc nodename   etc inet hosts   usr local rsi license license dat  to accommodate the new network information  which should be available from the observatory     A script called setupnet scr is found in  home root  This script will copy pre existing files for a given  network setup with suffix as hostname  For example    setupnet scr insguesta   will copy the network files used at IRTF  for hostname insguesta    etc hostname hme0 insguesta  etc  to   etc hostname hme0  etc  Currently  network files exist for host names mirsi  BU   insguesta  IRTE   and  mlof5  Mt  Lemmon   These names        be used as input arguments for t
22. d Chop Driver Box  if they are not  operating    5  Start the software       Login as camera  e Synchronize the UT time with the telescope if they are not within your tolerances by typing  xclock  digital Cupdate 1  amp  and correct using the UNIX date command as root   e From an open shell tool or xterm  start the image display program using the command  ds9  amp   then start the camera host software with the command  mirsi  This starts the MIRSI user interface and image display software   6  Ifthe power on the stepper motor electronics is cycled or being turned on for the first time  follow  these instructions       Power on the stepper motor electronics       Immediately initialize the motors       Open the  Observing Commands  Observing Parameters  window under the  Session pull down menu      Press the INIT button near the bottom of the window   REASON  When the motors electronics are turned on  the motor currents are active  The motor  currents add 3 W inside the dewar and will evaporate 16 L of He in a few hours    7  Start or continue the temperature log by opening the Temperature Control window under the  Session menu  Select Active    8  From the Setup menu  open the Observing Setup to setup the electronics for the observing session   A pop up window will request you to check the temperatures  After the YES button is selected  the  mirsi shell window should report a done for each of the selected tasks in the Controller window  If  the shell reports that errors have 
23. e pixels are not reset in  order to keep the photo charge integrating  After an integer number of clock cycles have occurred  1 e   the  frame time   VGATE is toggled to its low value to halt the integration  In the subsequent clock cycle  the  rows are addressed in sequence as usual  but the pixels are reset and read out with A D conversion and  coadding processes  After a specified number of these frames  coadds   the image is transmitted from  memory on the coadder boards to the host PC     Between exposures  the multiplexer is clocked continuously without integration using an idle clock cycle   global reset  followed by row clocking and pixel reset without integration and A D conversion   In chop  mode    these idle frames are taken between chop levels  while the secondary mirror moves between its alternate  beams    The chop high and chop low image buffers are stored in separate memory buffers in the coadder boards     SRAM memory and transmitted to the host PC as a single  large image     The characteristic times are  drawings not to time scale      Expose frame            gt  lt _ gt  lt                    5 On    Global reset Delay Expose clock Expose Clock Expose clock Expose clock Readout w pixel  reset  amp  A D  1 124 ms 0 041 ms 4 028 ms 4 028 ms 4 028 ms 4 028 ms 18 13 ms  Idle frame        nn  gt   Global reset Idle clock cycle    eo Te  4 63 ms total    MIRSI Operator s Guide       Chopping pattern     CHOP HIGH   Expose frames    CHOP WAIT   Idle frames HH   
24. er frame readouts  and display the updated  results accordingly when the Apply button is pressed     28    5 1 3 Nodding    Nod throws        set by the IRTF staff     At the IRTF  telescope nod is controlled over the network using the tcsio program  see  5 1 1   The host  software automatically uses this command between exposures to nod the telescope  The nod beams are  defined using the telescope control system  The commands tesio ABEAM and  080 BBEAM nod the  telescope to the respective beam     Note the chop driver box has a nod bit that is directly analogous to the chop bit  The host software sends a  command to the timing board to set or clear the nod bit before an exposure  This nod signal is used at Mt   Lemmon  but not at the IRTF     5 1 4 Collimation    To collimate the optical beam  first close the mirror covers and open the hatch so that the secondary mirror  sees the mirror covers  and the camera is looking at the secondary  Fine tune the dewar s pointing by  slowly loosening the bolts on the bipods to tip tilt the dewar  When the signal is maximum  measure the  gaps between the dewar and the bottom surface of the bipods using calipers or a micrometer  Create shim  spacers by peeling away layers on the bipod feet shaped shims until the shims are the correct thickness   Disconnect the dewar from the bipods  place the shims between the bipods and the dewar  then bolt the  dewar back to the bipods     Next  point the telescope at a bright star and defocus the star 
25. eration profiles for motor motion  and sends the  pulses to the SINCOS drives  Here are the steps to set up the motor control system       Briefly open the motor control box and inspect for loose boards and wires    e If disconnected  connect the MIRSI host computer serial port A to the DATAPROBE breakout box   There should be a null modem on the DATAPROBE master port        Connect DATAPROBE 25 pin output A to a null modem  A   then the null modem to the OMS control  board 9 pin input connector  located in the Phytron motor control box        Plug the four motor drive cable connectors into the Harting connectors at the rear of the motor control  box  Currently  the fourth connector is attached to a spare cable      Connect the motor drive cable pigtail output to the 32 pin connector on one of the dewar s feet  next to  the vacuum valve       Connect the four motor control cables to the dewar at the pigtail  The connectors should be color coded   Ensure that the cable is stress relieved        Plug the home switch temperature sensor pigtail cable into the 46 pin connector on the dewar      Connect the home switch cable from the 25 pin output on the rear of the motor control box to the  appropriate color coded pigtail connector      Ensure that the motor control box power switch is off  and then connect the power connector to a  standard power outlet     WARNING  Note when the motor control box is initially powered on   the motor currents are by default on  and this rapidly he
26. eset and timing file download   Press the white reset button a few times  If that is unsuccessful  recycle power on the Leach box a couple  of times  Eventually  these tricks will work     3 Absence of photo signal in an exposure  If the multiplexer is reading out correctly  source follower  gain test is successful   but there is no photo signal in an exposure  check for one or more of the  following steps      Detectors have been turned on  must occur every time array is powered on         Cold shutter is open      Aperture wheel is sitting at the imaging or a slit position      Both filter wheels are sitting on a filter and long wavelength blocker open position  1      no AI blank is  in the optical path      Frame time is sufficiently large enough for given filter     4 Certain channels exhibit radically different zero levels than the other channels  Usually this occurs  at the beginning of the night  when the electronics are first powered up  Try the following  which work  best after the electronics have been powered on for 5   10 minutes      Power down the array by deselecting    Camera power on       Power on the array by selecting    Camera power on      If that doesn t work  try        Power down the array by deselecting    Camera power on       Power down the Leach box      Wait 10 seconds  then power the Leach box back up      From software  follow the usual steps to reset the controller and power up the array        If that doesn t work  try       Power down the a
27. he setupnet scr script     After setting up the network files    reboot   as root  There may be some long pauses during boot  but once the machine is fully booted  it should have  network access  When MIRSI returns to the BU lab  run    18     home root setupnet scr mirsi as root     3 3 System Check    Ideally  once the host computer is running and is on the network  the operability of the electronics  array   and filter wheels should be verified  Doing so allows any problems to be identified and corrected before  the dewar is cold     3 3   Electronics    After the Leach electronics boards are reseated  check the operability of the electronics by connecting the  37 pin grounding plug to the box  Leave the 50 pin clocks connector open  don t short   This will produce  a  zero  signal  Follow the instructions for connecting the electronics to the host PC described in  3 7 1   and for taking images described in  4  but load the timing file   home camera software SOURCE zerolevel tim lod   The electronics should cooperate with the  commands given by the host computer  Take a few images  the level should be around 65 000 counts or so   this corresponds to  zero  level due to an internal sign flip in the signal      3 3 2 Array    Next  remove the 37 pin grounding plug from the Leach box and connect the Leach box to the dewar as  described in  3 6  Be sure the Camera Power On is deselected in the software  or better still  that the  electronics are powered off   Do the source fol
28. het extenders   incl  7 16    socket   cryo glove pairs  2    inflatable bladders  2    cable ties   dewar window baffle    Cables   tape drive to PC   PC to video monitor   fiber optic cable pair  100     2   packed in cardboard box  fiber optic cable pair  30     E  spare fiber optic cable pair  3     motor drive   signal   clocks   home switch   temp  monitor   temp  controller   ethernet   serial     PC A port  25 pin  to DATAPROBE input null modem   serial   gray   DATAPROBE output null modem to motor box  9 pin    serial   gray   DATAPROBE output null modem to temp  controller  8 pin modular   serial   brown   DATAPROBE output null modem to temp  monitor  8 pin modular   temp  and home switch cable pigtail   motor cable pigtail   BNC cable for chop signal out  25      9 pin male to female extension cable  for extender board   37 pin male to female extension cable  i    99    11    Case 5     180 lbs     Mount   bipods  3    bipod feet shims  6   electronics support bracket       12 20 bolts  nuts    1 20 flat  amp  lock washers  14 28 bolts   14 flat washers   14 20 lock nuts   3 8 16 bolts  nuts   3 8 flat  amp  lock washers  mount block screws  amp  pins  14 20 nylon brushings    YA nylon spacers    Documentation  MIRSI Operating Manual  MIRSI log sheets    MIRSI lab notebooks  MIRSI minutes  amp   correspondence   Raytheon array test data  Raytheon CRC 774 manual  IRLABS dewar manual    cooldown data for new  dewar   Phytron motor  amp  box  manuals   MIRSI Leach con
29. hield          MIRSI Operator s Guide         Amphenol LakeShore 321  4 pin connector monitor  97 3106   145  Sensor mating  65     connector   20 ft  2 twisted  w  stress relief dir      106 233    28 Gauge    97 3057 1007   braided shield     106 009   2 Amphenol E high clear  18 pin miniature F low black  connector    6E 14 18S     n        20 ft  8 twisted pair  28 Gauge  braided shield    Hmom            K  J    anv    321 temperature  controller    6 pin connector   only five are  used in our  application    Heater banana  plug connector    LakeShore  208 monitor  36 pin  connector    currently only  2 lines are  necessary                             RIO             Zzaom       MIRSI Operator s Guide    20 ft  8 twisted pair  28 Gauge  braided shield    36  ground  18  ground       MIRSI Operator s Guide    Amphenol Amphenol  8 pin miniature 8 pin miniature  connector    connector          25 Pin Male D Sub  w  hood and strain  relief    20 ft  8 conductor  20 gauge  shielded      ft  8 conductor    20 gauge  shielded       1  Phytr  on    Box  25 pin femail  D sub  connector    X home  Digital  Ground    Y home       DG    DG    DG     5 VDC     5 VDC     5 VDC     5 VDC    MIRSI Operator   s Guide    Wiring diagram on the OMS board     ONC VME board      68 Pin osts  1 BG  3  BF  3  BE  1  BE 5  BD 3  BC 3       5       5                                       o  ls            AX NIS   gt       Slo  gt          gt          AW 3    AU 5     gt    lt             a       
30. ignated  range of the A D converters  usually 0      5 V  set in the timing source code  Note the response is  usually best at LHe temperatures       Now  update VRSTUC  LOW  to  3  Take a few images  The counts should increase by a similar  amount  i e   there should be linear response with changing VRSTUC LOW      The SFG can be calculated using the following formula     SFG   AV ou AVin    Where        Naau AD_RANGE    65535 x LEACH GAIN  and       is the change      VRSTUC   VRSTUC HIGH   VRSTUC LOW  or 2V   VRSTUC LOW   The AD RANGE is typically 5 V  and  the LEACH GAIN is 2  The SFG is specified at roughly 0 6  Thus  a change in VRSTUC of 0 5 V should  produce a signal swing of about Naa    13 000 counts  If the AD RANGE is 10 V  the swing will be about  6 000 counts         If the SFG test is successful  turn the camera power off  If the camera is cold  4 K   follow the  instructions for operating the camera in observing mode  will require loading a different timing file      22    3 8 Motor Control System    MIRSI contains three cryogenic stepper motors  fabricated by Phytron  to turn the filter and aperture  wheels  The components used to drive the motors are housed in the Phytron motor control box  This box  contains three SINCOS current drivers  that turn the motors   which are controlled by an Oregon Micro  Systems  OMS   intelligent  control board  The OMS board communicates with the host PC over an RS   232 serial line  computes the position  velocity  and accel
31. ill port  keeping the tube as far down as possible  without obstructing the venting gas      The temperature of the cold surface should start dropping within a minute or two  Once liquid starts to  collect in the reservoir  the venting plume should decrease noticeably  and the temperature should drop  rapidly to below 10 K      The pressure in the LHe storage dewar should be kept at 1    3 psi  If the pressure drops below this level   pressurize it by cycling warm He gas into the storage dewar using the inflatable bladder or cylinder of  GHe      The reservoir will fill up in 30 40 minutes  liquid will begin to shoot out of the fill port     remove the fill  line immediately  depressurize the storage dewar  and remove the fill line      Measure the LHe level in the storage dewar  and record results in the MIRSI cryo log       The hold time for this initial fill should be 12   18 hours  Once the LHe transfer is completed  top off the  LN   reservoir        Attach the flow meter to the LHe fill port and mount to the dewar appropriately  Attach the boil off hose  to the     fill port     3 6 Mount    20        Attach the interface plate for the electronics support bracket before shipping MIRSI    e Attach the electronics support bracket to its interface plate on the dewar using 14 28 hex head bolts and     flat washers      Attach the Leach electronics box to the electronics support bracket  Use 2 nylon spacers on each PEM  stud against the box surface  Insert a nylon bushing is
32. ing          Box 6084 75 Coromar Drive  Santa Barbara       93160 Bldg  B2  MS 8    Mr  Robert  Bob  Mills  Sr  Focal Plane Engineer  Raytheon Electronic Systems  Infrared Operations    PH   805 708 5084 Goleta  CA 93117 3090  FAX  8 5 683 2462 PH   805 562 4064  jwock  earthlink net FAX  805 562 2127    remills   west raytheon com          Mount Design and Fabrication    Mount design  amp  bipod fabrication Mount fabrication   Mr  John Polizotti Mr  Robert  Bob  Vere  Project Manager  Harvard Smithsonian Center for Astrophysics Boston University Scientific Instrument Facility  60 Garden Street 3 Cummington Street    Cambridge  MA 02138 Boston  MA 02215  jpolizotti   cfa harvard edu PH   617 353 2614 or 617 353 5056  PH  617 495 7466 FAX  617 353 6021   vere  bu edu          2  PREPARING MIRSI FOR AN OBSERVING RUN    2 1 IRTF contact info    Hilo office  Institute for Astronomy   IRTF Manoa office  Institute for Astronomy     IRTF  640     Aohoku Place   209 2680 Woodlawn Drive   Hilo  HI 96720 Honolulu  HI 96822   808 932 2300 808 988 3893   FAX  808 933 0737 FAX  808 988 3893   Summit  808 974 4209    FAX  808 974 4212    Shipping  Attn  George Koenig  Hilo address     koenig  irtf ifa hawaii edu  808 974 4209    Instrument interface   and cryogen coordination  Lars Bergknut  summit   bergknut  ifa hawaii edu  808 974 4210    Administration  Karen Hughes  Manoa   Hughes   irtf ifa hawaii edu  808 956 6795    Observing Requirements Form  http   irtfweb ifa hawaii edu userSup
33. ipheral components    Disconnect the serial lines and connectors between the host PC and the DATAPROBE box  and between  the DATAPROBE box and the peripheral components    Dismount the Leach power supply  chop drive box  temperature monitor  temperature controller  motor  control box  and DATAPROBE box    Dismount the dewar    Dismount the Leach box from the electronics support L bracket    Unscrew the electronics support L bracket from the dewar  Leave the interface plate attached to the  dewar    Remove the flow meter and hoses  and blow out remaining cryogens in the dewar    Unbolt the mounting plate from the telescope and remove    Remove bipods from the mounting plate    Halt the host PC    Disassemble the host PC  monitor  tape drive  keyboard  and mouse    Pack the crates with care    Label the crates under the same airbill    Notify George Koenig that MIRSI is ready to be shipped  The IRTF staff will haul the cases down to the  IfA Hilo office    After George confirms MIRSI is in Hilo  contact Fedex and have them come and pick up the shipment at  the IfA Hilo Office     MIRSI Operator s Guide    APPENDIX    This appendix contains check lists for MIRSI setup  nightly tasks  a troubleshooting guide  and wiring  diagrams for major electrical additions and or  rebuilding  jobs            12   13     14   15   10   17   18   10   20   21     22   23   24     25     MIRSI Operator s Guide    CHECK LIST FOR MIRSI SETUP    Unpack the camera  Be sure the dessicant trap is atta
34. ithsonian Center for Astrophysics  60 Garden Street  Cambridge  MA 02138    P I  Lynne Deutsch Co I Joe Hora   Ideutsch  cfa harvard edu jhora  cfa harvard edu  PH  617 384 8209 PH  617 496 7548  FAX  617 495 7490 FAX  617 495 7490          Also  John Polizotti is the mechanical engineer who designed the MIRSI telescope interface mounting  hardware    jpolizotti Ocfa harvard edu   PH  617 495 7466       Boston University Institute for Astrophysical Research  725 Commonwealth Avenue  Boston  MA 02215    Postdoc Joe Adams Grad student Marc Kassis  jdadams O bu edu mkassis  bu ast bu edu  PH  617 353 0285 PH  617 353 0285  FAX  617 353 5704 FAX  617 353 5704    Also  Fiscal Administrator Kim Paci has handled MIRSI fiscal accounts  kpaci bu edu   PH  617 358 0603   FAX  617 353 5704       1 3 Engineering vendor contacts    Dewar Cryostat Design and Fabrication    Infrared Laboratories  Inc   1808 East 17  Street  Tucson  AZ 85719 6505  http   www irlabs com  irlabs  irlabs com       Elliot Solheid  Project Manager  esolheid  irlabs com  PH   520 622 7074  FAX  520 623 0765       Kirby Hnat  Sr  Cryogenics Engineer  khnat irlabs com   PH   520 622 7074   FAX  520 623 0765       Electronics Box       Dr  Robert  Bob  Leach  Astronomical Research Cameras  Inc   Dept  of Astronomy  MS 1221   San Diego State University   San Diego  CA 92182   PH   619 594 1406   FAX  619 594 7454   leach   mintaka sdsu edu    Detector Issues       Dr  Steve Solomon  Raytheon Consultant  Acumen Consult
35. jects     MIRSI   s capabilities span broad and narrow band imaging  2 26 um   imaging at a selectable wavelength  with a circular variable filter  CVF   7     14 um   and grism spectroscopy  10 and 20 um   The camera  operates within a vacuum chamber  on a plate that is cooled to liquid helium temperatures using a 2 stage  cryostat  The first stage is cooled using liquid nitrogen  For technical specifications of the instrument and  its capabilities  see Deutsch et al  in Astronomical Telescopes and Instrumentation  2002  SPIE  in press    or view the AAS poster by Deutsch et al   2001   both papers are available on the MIRSI web site at    http   mirador bu edu mirsi      The primary purpose of this manual is to document the steps required to operate MIRSI in the lab and at  the telescope  As a visiting instrument at the IRTF  MIRSI requires transport to and from the Mauna Kea  summit  so the current contact information and packing lists that should help facilitate the shipping ordeal  have been included  A brief troubleshooting guide documents a few bugs in MIRSI that are persistent and  not necessarily understood  but usually predictable and easy to fix     For a discussion of the principles of mid infrared observing  and for lists of IR standard stars for flux  calibration and other references  see the MIRAC3 User s Manual  W  Hoffmann  amp  J  Hora 1999   online  at   http   cfa www harvard edu  jhora mirac mrcman pdf        1 2 MIRSI personnel contact info    Harvard Sm
36. lly this means the signal is  disconnected before it reaches the A D converter  the A D converter outputs a railed value for an open  input   Try powering down the electronics  and then reseat the signal cable connectors  If the disconnected  signal is persistent  it must be found by checking the connectivity of the signal chain from the detector  pins to the A Ds  Only a MIRSI team member should perform this procedure  since it can put the array   and the rest of the electronics  at risk     7 Host software freezes  The best way to solve this problem is prevention  Overloading the mirsi  program with commands while the program is performing a task can lead to paralysis of the program  If  the program does freeze up  try the following in sequential order until one works       Press the reset button on the PCI card  white button on the PC near fiber optic connectors  a few times      Power down the Leach box  If this is successful at freeing the program  exit the program  and then  power everything up in the usual order         f both of the above are unsuccessful  power down the Leach box  then power down the PC  Obviously   this poses a risk to both the array and the PC file systems     8 Slow LHe fill and or condensation and frost on transfer line  The LHe transfer lines are prone to loss  of vacuum in their insulating jackets  Pump out the transfer line for a few minutes  If the problem persists  after pump out  such behavior has been known   use another transfer line     
37. lower gain  SFG  test  83 7 2  to be sure the array  multiplexer is working  The SFG will be slightly lower when the array is warm     3 4 Dewar evacuation using vacuum pump    The procedure for pumping the dewar down to high vacuum is also described in the IRLabs Boston  University manual  MIRSI uses a turbo molecular pump  backed by a conventional mechanical pump       Open the cold shutter    e Connect the dewar vacuum valve to the vacuum pump  In the lab  you can use the NW40 NW25 tee  connector to adapt the Edwards vacuum gauge to the  typically  NW40 pump line  Connect the gauge  forward of the turbo pump    e Leaving the dewar valve closed  begin pumping and evacuate the vacuum line  usually until the turbo  pump is running nearly full speed        Slowly open the dewar valve  There may be a slight hissing due to evacuation of gas in the dewar   depending on whether the dewar was initially under vacuum  Very slowly continue to open the valve in  small steps  When hissing stops  usually after several minutes  open the valve fully  and continue  pumping overnight  or least several hours if the dewar was initially under a good vacuum        When the dewar reaches sufficiently low pressure  10  to 10  Torr   first close the dewar valve  then  turn the pump off  After the pump winds down  vent the pump line and disconnect the pump line from  the dewar valve        Attach the NW 40 safety cap blank to the mouth of the dewar valve     19        Close the cold shutter  then di
38. n   ended   small bread board   bread board wire    MIRAC User s Manual  mount drawings  wiring diagrams        JFET box   clock  amp  signal cables  temp   amp  motor cable  motor control boards  chop driver board  electronics box  amp    connectors  dewar connectors    Case 6     90 Ibs     mount plate  packed with foam    Case 7     40 Ibs     LHe transfer lines  2     foil tape  duct tape  packing tape    Extra dewar hardware  8 32 cap screws  17    4 40 cap screws   2 56 cap screws   4 40 flat head screws          316 178      plastic washers for fill ports    NW25 vacuum connector to evacuation valve    wire wrap wire   coax wire  26 AWG  spool  red black wire  26AWG   spools   assorted resistors and caps  spare J500 JFETS    anti static wrist straps w clips  gender benders  9   amp  25 pin  extra null modems   plastic mil spec connector  covers   fiber optic connector covers    2 5 Suggested shipping crate labels and orientation markers    Here are some labels that have been attached to the MIRSI shipping crates     13    CASE I    CASE 2       CASE 4    CASE 5       CASE 7    CASE 8                               7    THIS SIDE UP          3  SETTING UP MIRSI    3 1 Unpacking and inspection    MIRSI should be unpacked and inspected upon the observing team s arrival  Open the crates  and look for  any possible damage  Lay components out neatly on the tables in the visiting instrument room  If there is  any damage  notify the present senior person     In particular  unpa
39. occurred  try running the Observing Setup a couple of times  See  the troubleshooting guide for tricks to make it work if the problem persists     REASON  The electronics will sometimes boot in an unusual state which requires time for the  DSPs to reset     9  Open the Observing Parameters window     e Click on the Observing button   e Select Home All Wheels    26        Press the Move button  The Move button should morph into Stop  When the wheels have  reached their home positions  the Move button will appear again  Once the wheels are homed   they do not need to be homed again unless the motor control box loses power or the wheel  position becomes incorrect for some reason        Choose an initial filter and Press the Move button to rotate the wheels    10  From the Observing Parameters window        Select        before Power On        Select Camera Power On        Select appropriate observing parameters and press the Apply button    11  Poweron the detector  Select Set Detector Voltages from the Setup menu  Answer Yes to the   warning if the camera is cold  4 K     This option sets the correct voltages from the the Bias and Clock Voltages window     WARNING  Do not apply these voltages when the camera is warm   gt  15K   Doing so    will induce large currents through the detectors  and could damage them                       VCASUC  3 5  VDETGRV 15              4 0   HIGH   VGATE Sus   LOW              Note  These voltages require reapplication after each time the camera
40. ole pattern and orientation direction       Verify which IRTF cables will be available to link the camera system in the dome to the control room   such as fiber optic cable  150  length  w  ST connectors   BNC cable  and serial cable  150   length    Expect to bring these cables to IRTF in any case as backups       1 months ahead of run      Determine cryogen quantities that will be used  Fill out Observing Requirements Form      Check that a Gaspro account exists to pay for cryogens    e Notify Lars of the cryogen plan so that he can obtain the LN  for the run and anticipate LHe delivery by  Gaspro       10 days ahead of run      Order LHe from Gaspro for delivery  presumably for delivery on the Wednesday before initial  cooldown       Pack MIRSI cases and determine their weights  should be similar to previous weights in the past   Label  cases and attach a copy of the airbill on each case        Ship MIRSI to the IfA office in Hilo  Attn  George Koenig   NOTE  The Fedex heavyweight division  does not deliver to Hilo  only Honolulu  Alternate carriers  e g  Aloha Airlines Cargo  are available to  deliver shipments from Honolulu to Hilo  Allow several days for the IRTF staff to bring the MIRSI  equipment up to the visiting instrument room on the summit       few days ahead of run        Plan to arrive at Hale Pohaku a few days in advance of the run in order to become acclimated to the  altitude and to unpack  pre cool  and setup MIRSI on the telescope  The camera setup proced
41. or currents off by pressing the INIT button in the host software   7 Restart Temperature Log if inactive   8 Update UT date labelled data directories  if necessary   9 Set UT date     run xclock    digital  update 1 and update using UNIX date command as root   10  Select Observing Setup  Power on   Set detector voltages in this order   11  Take a few images  If a few channels are bad  see the Troubleshooting Guide     Shutdown      Camera power off from host software    2 Leach box power supply off    3 Leave MIRSI program up and keep temperature log active    4  Attach dessicant trap     window cover    5 Close cold shutter    6 Measure LHe level in storage dewar  amp  determine the time for the next fill   7 Fill the dewar cryogen reservoirs as necessary    8  Measure storage LHe level again  record results in cryo log    9 Backup data onto tape and or remote machine     MIRSI Operator s Guide    MIRSI TROUBLESHOOTING GUIDE    The MIRSI system sometimes exhibits a few strange problems that require on the fly adjustments to the  system  The  solutions  to some of the problems are often superstitious in nature  less than 100   guarantee that they will work  but seem to have worked in the past for some known or unknown reason     1 No power on indicating LED lights illuminated on the rear of the Leach box and PCI board   Power down the Leach box  and reseat the Leach power cable connectors at both ends     2 Host software issues fail warnings during application of controller r
42. port ORF html    LHe orders and delivery  Gaspro Hilo Mailing address  P O  Box 30707  Honolulu  HI 96820 0707    2 2 Cryogens at IRTF    The MIRSI team is responsible for obtaining the appropriate amount of cryogens at the IRTF summit  The  expected amount of cryogen use should be determined well in advance of the run and entered into the  Observing Requirements Form  In addition  contact Lars Bergknut directly and let him know of MIRSI   s  cryogens plan     IRTF will provide LN5  but the MIRSI team must specify the amount  The MIRSI team is responsible for  ordering and scheduling the delivery of LHe to the summit  Place LHe orders directly with Gaspro Hilo   808 935 3341  at least 10 days in advance  because LHe is obtained from the mainland  and have them    deliver it to the          on the summit of Mauna Kea  Currently  Gaspro delivers to the summit on  Wednesdays  The IRTF staff can pickup LHe on other days  but Gaspro delivery is usually preferred   Also  expect to receive only 8096 of the nominal LHe quantity due to boil off during transport  The storage  boil off rate on the mountain is approximately 2 liters per day     Note Fiscal Administrator Kim Paci  BU  has set up a BU account with Gaspro  If another account will be  used to pay for cryogens  it will have to be created     2 3 Timescale guidelines      3 months ahead of run    Contact Lars Bergknut to      Discuss the instrument interface  Lars may request a drawing of the MIRSI mount plate with the bolt  h
43. port to a null modem  C  attached  to output port C on the DATAPROBE breakout box      Connect the 8 line brown serial line between the controller s serial I O port to a null modem  B   attached to output port B on the DATAPROBE breakout box      Power on the controller and monitor and verify that the sensors are reading the expected temperatures     3 0 2 Operation of temperature controller    A Lakeshore temperature controller reads the temperature of the sensor on the rear of the cold finger  The  controller also has a 2 pin current output  which is connected to a heater  resistor  on the rear of the cold  finger  The controller allows closed loop temperature control using the sensor and the heater  or can  simply be used as an open loop temperature sensor  To use the closed loop mode  select Set Point  enter  the desired temperature  and press Enter  Then press Heater Low or Heater High  For open loop mode   press Heater Off  MIRSI currently operates in the open loop mode  so the heater power is usually off  See  the Lakeshore 321 User s Manual for further information     3 9 3 Operation of temperature monitor    A sensor temperature reading is selected by manually cycling through the eight available channels on the  monitor using the CHANNEL button  Currently  the channels utilized are    1 Detector fanout board  rear side   2 77 K shield   3 Floating shield   See the Lakeshore 208 User   s Manual for further information     3 9 4 Temperature log    The host software con
44. rray by deselecting    Camera power on        From a shell tool or xterm  type cd  home camera software SOURCE choptest custom      Using your favorite text editor  edit the file waveforms asm by changing the parameters OFF O     15   e g   the channel offsets should read something like     OFF 0 DC   0c0000  OFF 1 DC   0c4100  OFF 2 DC   0c8200  OFF 3 DC   0cc300    OFF 4 DC   1c0400    MIRSI Operator s Guide    OFF 5 DC   1c4500   OFF 6 DC   1c8600   OFF 7 DC   1cc700   OFF 8 DC   2c0800   OFF 9 DC   2c4900   OFF 10 DC   2c8A00   OFF 11 DC   2ccB00   OFF 12 DC  3c0C00   OFF_13 DC   3c4D00   OFF 14 DC   3c8E00   OFF 15 DC   3ccF00      Save the file  then from the window  type tim  The timing file should compile        Reset the controller and and download the new timing file  Follow the usual steps to power  up the array       Restore the offset levels in waveforms asm to the usual values  last three digits of OFF 0     etc  are usually 500   Power down  reset  reload  and power up again   There is no guarantee that these tricks will work at all     5 Chop and or nod differenced images exhibit a noise pattern that affects faint signals  The bad news  is the noise is persistent and difficult to remove for extended sources over the whole array  The good news  is for point sources  the noise can be filtered by e g  subtracting the median level of the set of pixels that  are in the same location in every channel     6 One or more channels reads a railed ADU value of 65535  Usua
45. sengage the pivot shaft     3 5 Cooldown    The procedure for cooling the dewar is also described in the IRLabs manual for the Boston University  dewar  When observing  fill MIRSI with LN  once per day at the end of the night  Fill with LHe every 36  hours  if possible  otherwise fill with LHe at the end of each night     3 5   Pre cool    e First  connect the LN   storage dewar to the LN   reservoir using a latex type hose and the IRLabs fill  tube  Be sure the reservoir can vent gas without obstruction  Then slowly begin LN  flow into the  reservoir  Once liquid begins collecting  it should take 15     20 minutes to fill the reservoir  assuming the  storage dewar pressure is at the nominal 22 psi  a smaller storage dewar at lower pressure will take  longer     e Repeat for the LHe reservoir using LN    This reservoir takes 30     60 minutes to fill    e After a few hours  top off the LN   reservoir  Attach boil off hoses to prevent ice plugs from forming in  the fill port necks  Allow the dewar to cool to 77 K overnight  or if pressed for time  at least 6 hours     3 5 2 LHe cooldown        When pre cool is completed  measure the level of LHe in the storage dewar        Pump out the LHe transfer line if it has not been pumped out recently       Blow out the LN  in the LHe reservoir      Insert gradually a LHe transfer line into the storage dewar  After a few minutes  liquid should be visible  exiting the transfer line      Immediately insert the transfer line into the LHe f
46. tains a program that automatically cycles  reads  and records all temperatures at  regular intervals  To start this program       Boot the host software    24        From the Session menu open the Temperature Control window       Select Active      The program will automatically create a temperature log for that date  or append to an existing one  in  the ASCII file  home camera TemperatureLogs log YYYYMMDD  Alternatively     log file name can  be manually entered     3 10 Telescope    At IRTF  the day crew will prepare the telescope at the beginning of the run for observations with MIRSI     3 10 1 Secondary mirror  The appropriate secondary mirror  chopping secondary    35  should be installed and cleaned by the day    crew  MIRSI should not be mounted on the telescope during this procedure  to save cryogens   unless  necessary     3 10 2 Balance    Once MIRSI is cold and mounted with all components and cables secured on the telescope  the telescope  should be weight balanced by the day crew     25    4  OPERATING MIRSI    This procedure contains the steps for taking an exposure once the dewar has been pumped out  cooled  down  and has reached a stable operating temperature     1    Open the cold shutter      Remove the window cover    3   Turnon the Leach power supply  Two green LED lights in the rear of the Leach box should indicate  that the power is on  If no LED lights are on  see the Troubleshooting Guide    4  Power on the Utility Electronics  Temperature monitors an
47. tically backup the desired directories  save and gzip the backup  file names in a file called  home root backup backup  YYMMDD gz  notify the user by e mail when  completed  rewind  and eject the tape        Make a note in the MIRSI lab notebook that the system was backed up onto tape  identify tape by A B   date  or whatever      MIRSI Operator s Guide    Electronics Box to boards wiring Co Adder Clock Driver  1  Controller box bd 0 bd 1 bd 2 bd 3  Top Plate              DB 9  Male         gt      DB 37 M gt   20 Output  1 2   1 Coax shield  1 1   21 Output  2 7   2 Coax shield  2 6   22 Output  3 9   3 Coax shield  3 8   23 Output  4 4   4 Coax shield  4 3   24 Output  5 2   5 Coax shield  5 1   25 Output  6 7   6 Coax shield  6 6   26 Output  7 9   7 Coax shield  7 8   27 Output  8 4   8 Coax shield  8 3   28 Output  9 2   9 Coax shield  9 1   29 Output  10 7   10 Coax shield  10 6   30 Output  11 9   11 Coax shield  11 8   31 Output  12 4   12 Coax shield  12 3   32 Output  13 2   13 Coax shield  13 1   33 Output  14 T   14 Coax shield  14 6   34 Output  15 9   15 Coax shield  15 8   35 Output  16 4   16 Coax shield  16 3   36  amp  37 Grounds 55 5 5   18 Offsets channels 9 16 36  not      19 Offsets channels 9 16 37  attached    MIRSI Operator s Guide    CONTROLLER BOX  DB 50 Female     IMUX   2 VGG2   3 VGG3   4 VGG4   5 VDETGRV   6 VDETGRNG   7 VNEG   8 VCASUC   18 VRSTUC  19 VSHPCHG  20 VSH   21 VDDD   22 VDD4   23 VSSD   24 VSS1   25 VSS2   34 VPW   35 VCLOUT  36 VCL
48. to a    doughnut    or ring shape as seen by the  camera  Have the telescope operator adjust the tilt of the secondary mirror until the ring appears uniform  in brightness     5 1 5 Target lists    Target information is gathered by the host program and entered into the image FITS headers  Currently   the host program does not yet send coordinates to the telescope control system  The host program can  upload a file containing a list of targets or coordinates  This feature speeds up the process of updated the  target information into the FITS header  A target file requires the form   Object          RA DEC Epoch   e g   note the underscore in the name string      Orion nebula 05 05 50  05 30 29 2000  To load the target list  first from the Session menu select Target  amp  Observer Info  and then load the file     Alternatively  an observer can enter the target information manually  and optionally add the target to the  current list     29    5 1 6 Standard stars    For point source flux calibration  the MIRSI team typically uses bright targets from a list of mid infrared  standard stars in the MIRAC3 User s Manual  W  Hoffmann  amp  J  Hora 1999      5 1 7 Telescope offsets and dither mosaic procedures    Telescope offsets can be sent from the MIRSI host software to the telescope control system  Under the  Session menu  open the Offset Commands window  Manually enter the offsets  in arcsec  and press the  Send button     To load an automated  4 step dither pattern  choose tiny 
49. troller  Leach board schematics  A D  FIFO data sheets  Lakeshore 208  amp  321  manuals   OMS control board manual    Voodoo software manual  FITS manual    Tools   hex key sets  2    hex ball driver set   long 9 64    hex ball driver       jewelry screw  amp  socket  drivers set   wire cutters  Ig   amp  sm    needle nose pliers  Ig   amp  sm    adjustable wrench   calipers   tape measure   electric drill   wire stripping tool   wire strippers    crimping tool  exacto knife  amp  blades  razor    retaining ring pliers  phillips  amp  flat head drill bit  set   drill bit set   long  amp  short tweezers   wire wrap stripping tool    IC extraction tool  dental tools    mechanical fingers    Miscellaneous  small flashlight  latex gloves    Kim wipes    Polystyrene calibration cards  wood screws    12     Vacuum  amp  Cryo   vac  gauge  optional    vac  gauge meter  optional   8 line cable for meter   optional    ambient temp  sensor  wire  amp   pins   NWA0 25 tee connector  NW40 to 25 cone adapter  NWAO to 25 straight adapter  NW23 to nozzle adapter  NW25 clamps  4    NW40 clamps  2    NW25 blanks  4    NW40 blank  1 on dewar  1  extra    NW25 40 plastic covers  NW25 40 O rings  2 4 each   pipe thread to thin nozzle  adapter   pipe thread to wide nozzle  adapters   teflon tape    transfer line O ring fittings  hose clamps    extra latex tubing    Electrical    electrical tape    DMM   DMM wires   DMM leads needle tipped  DMM leads aligator tipped    DMM wires  socket   amp  pi
50. tter  then disengage the pivot shaft    During pump out and or pre cool  the day crew can install the appropriate secondary mirror for MIRSI   chopping secondary     Begin pre cooling with LN    Allow for pre cooling overnight if possible    After pre cool  blow the LN   out of the LHe reservoir  Immediately begin LHe fill    Attach the mount bipod legs to the mount telescope interface plate    Attach the mount telescope interface plate to the MIM    Attach the dewar to the mount bipods  assuming LHe fill is completed     Attach the flow meter to the LHe fill port and mount to the dewar appropriately    Mount the leach power supply box onto the MIM    Rack mount the peripheral components onto the MIM  motor control box  temperature  monitors controller  chop drive box    Connect power and signal cables to all components  Stress relieve the cables    Connect fiber optic cables to the camera electronics  and the chop drive box  Stress relieve carefully   Set up the MIRSI host computer and connect to the network  if not done already  Boot the host software  and verify that the temperature  filter wheel motors  and camera electronics are functioning properly   Balance the telescope     MIRSI Operator s Guide  MIRSI NIGHTLY OBSERVING CHECK LISTS    General Startup      Be sure camera and cables will be free of obstruction during telescope motion  2 Open cold shutter   3 Turn on Leach box power   4 Remove dessicant trap   5 Start host software  if not already running    6 Check mot
51. ure should  be coordinated through Lars so that MIRSI does not interfere with other IRTF projects     2 4 Packing inventory and weight distribution    This has been a typical configuration for the MIRSI equipment  Of course  the location of small   miscellaneous items will have to be adjusted to the distribution of available space  Weights will vary  accordingly     Case 1     185 Ibs     dewar w NW40        on vacuum valve and grounding caps on all mil spec connectors  snout   rear electronics support bracket interface plate  bolted to dewar   window cover    Case 2     160 Ibs     SUN CPU case   motor control box   Leach power supply   Leach electronics box w 50 pin open connector and 37 pin grounding connectors attached  temperature controller   chop drive box   chop drive power cable    Case 3     120 lbs     computer monitor   temperature monitor   keyboard   mouse   DATAPROBE box   DATAPROBE box power cable  null modems  4 or more    extra 8 line serial cable spool  4mm data storage tapes   lt   12 GB     10    Case 4     80 lbs     JFET box  packed with foam   power cables   9 or more   suggest label w  green tape as MIRSI ID tag   latex hosing  small and large diameter   small stainless steel Funnel with fill tube  25 pin serial cables  25  length   2    flow meter     packed in bubble wrap  cryo gauge        IRLabs fill tube w  vent port          extender board  packed in cardboard box  portable socket set    small socket ratchet   socket driver   long and short ratc
    
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