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        User Manual: AimPlex Multiplex Immunoassay
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1.    Standard 7  1 729  80 160   Blank 0 160    Note  If very low levels  less than 10 pg mL  of cytokines are expected in the samples  we recommend  adding 1 or even 2 more standard points  Standard 8  1 2187  and Standard 9  1 6561  in the assay for  better quantitation at low concentrations  Standard 1 may be omitted when assaying those samples     Note  Serial dilution factor may be different for custom assay panels  Refer to the  Standard Info Sheet   enclosed in the kit for details     9 Performing the assay    9 1  Prepare the plate template  Mark the standard  sample and blank wells  Standards and  samples should be run in duplicates or triplicates  If the whole plate will not be used  seal  the unused well with a plate seal     Important  Place the filter plate on top of the filter plate lid during the entire assay  process to prevent touching the plate bottom on any surface     9 2  Vortex working bead suspension for 15 second   9 3  Add 45 uL of capture bead working suspension to each well     Note  Save the remaining capture bead working suspension and store at 2 8  C with light  protection  It can be used for setting up acquisition parameters on the flow cytometer     9 4  Remove buffer in the wells by using the EZPrep Filter Plate Washer     14  Rev 1 3 11      7 L   Bioprocess e AimPlex   E Development Co  bier bueren tor Fo    9 5     9 6     9 7   9 8   9 9   9 10   9 11   9 12   9 13   9 14     9 15   9 16   9 17   9 18   9 19   9 20   9 21     9 22   9 23   9
2.   417   658 uL of ddH o    7 1 7  Add the appropriate volume  determined in Step 7 1 6  of ddH O to a test tube labeled with   Working dAb Solution      7 1 8  Add the appropriate volume  determined in Step 7 1 5  of 3x NR or Mouse Rat dAb Diluent   7 1 9  Add the appropriate volume  determined in Step 7 1 4   of each dAb stock into the  Working  dAb Solution   tube    7 1 10  Mix by gentle vortexing  The working dAb solution can be stored at 2 8   C for up to 24 hrs     12  Rev 1 3 11    Y Bioprocess   Ai e  SL 4 Development Co  O AimPlex    W    Multiplex Immunoas     7 2 Premixed Multiplex Kits    Transfer the entire content of 2x NR or Mouse Rat dAb diluent to the 2x Premixed Biotin dAb vial  Mix  by gentle vortexing  The working solution can be stored at 2 8   C for up to 24 hrs     8 Preparing Antigen Standards    8 1 Reconstitution of the lyophilized standards    8 1 1 Ifthereis only one standard vial in the kit  8 1 1 1  Centrifuge the antigen standard vial at 2 000x g for 10 sec   8 1 1 2  Add 250 uL of CCS  cell culture supernatant   SPB  serum plasma bodily fluid  or TL   Tissue cell lysate  standard diluent into the vial   Note  Reconstituted volume may be different for custom assay panels  Refer to the   Standard Info Sheet  enclosed in the kit for details     8 1 1 3  Vortex gently for 15 sec   8 1 1 4  Incubate on ice for 5 10 min   8 1 1 5  Vortex gently for 15 sec before Serial Dilution Preparation  Step 8 2     8 1 2 Ifthere are multiple standard vials in th
3.   L a Bioprocess e AimPlex   O Development Co  Aani immunoassays for Flow    User Manual    ye  AimPlex     d Multiplex Immunoassays for Flow       Non Magnetic Beads    PN  UM P20121001    For research use only  Not for use in diagnostic procedures     Rev 1 3 11    Multiplex Immun    L a Bioprocess e AimPlex   y e Development Co  2 passays for Flow       AimPlex   assay kits and any related reagents and documentation are provided    as is    without warranty of  any kind  Although we have tried our best to ensure accuracy of this user manual and any related  documentation  YSL Bioprocess Development Co  does not warrant  guarantee  or make any  representations regarding the use or the results of the use of AimPlex assay kits and related  documentation in terms of correctness  accuracy  reliability  or omissions  The entire risk as to the use   results  and performance of AimPlex assay kits and related documentation is assumed by the user  YSL  Bioprocess Development Co  assumes no liability of any kind  whether oral or written  expressed or  implied  for any direct  indirect  special  incidental  or consequential damages resulting from any defects  in its documentation  This user manual and related documentation are subject to change without notice     AimPlex is a trademark licensed to YSL Bioprocess Development Co     All other trademarks appearing in this user manual are owned by their respective owners     Please contact Customer Service at contact yslbio com with any q
4.  24   9 25   9 26   9 27   9 28   9 29     9 30   9 31     Rev 1 3 11    Gently tap the plate bottom onto several layers of paper towels to remove residual buffer  after removal of the buffer   Add 30 uL of CCS  SPB or TL Assay Buffer to each sample well     Note  Cell culture supernatant samples can be run without diluting in Assay Buffer if  very low levels  less than 20 pg mL  of cytokines are expected  If it is the case  skip this step  and add 45 uL of cell culture supernatant samples to each sample well in Step 9 7     Add 15 uL of samples to each sample well    Add 45 uL of standards to each standard well    Cover the plate with a plate seal    Incubate on the shaker  set at 700 rpm  for 60 min at room temperature  Protect from light   Remove the plate seal    Remove solutions in the wells by using the EZPrep Filter Plate Washer    Wash the wells three times with 100 uL 1x Wash Buffer using the EZPrep Filter Plate Washer   Gently tap the plate bottom onto several layers of paper towels to remove residual buffer  on the plate bottom after the last wash    Add 25 uL of biotinylated antibody working solution to each well    Cover the plate with a plate seal    Incubate on the shaker  set at 700 rpm  for 30 min at room temperature  Protect from light   Remove the plate seal    Remove solutions in the wells by using the EZPrep Filter Plate Washer    Wash the wells three times with 100 uL 1x Wash Buffer using the EZPrep Filter Plate Washer   Gently tap the plate bottom onto 
5.  7 of the 44m beads    25x Analyte Specific biotinylated detection Ab  e g  25x Biotin human IL 2 35 uL  dAb    Lyophilized Antigen Standard  1 vial       Each vial may contain one or multiple antigens  refer to lot specific Standard Info Sheet for details        3 1 2 Basic Kit   There are 2 species specific  non rodent  NR  and mouse rat  Basic Kits    3 1 2 1 NR  Non Rodent  Basic Kits   These Basic Kits are for human  non human primate and other non rodent species assays     Component Vol    32 Tests  Vol    96 Tests       3x NR Detection Ab Diluent 0 3 mL 0 85 mL       1x Streptavidin PE  SAPE  1 mt 3 mL    Rev 1 3 11        e  Y      Bioprocess       est AimPlex  e  Development Co  L   Multiplex immunoassays for Flow     W    10x Reading Buffer 1 5 mL 5mL    10x Wash Buffer 5mL 15 mL  PCR 8 tube Strip 2 each 2 each    Filter Plate and Lid 1 each 1 each    Plate Seals 3 sheets 6 sheets    User Manual 1 each 1 each       Packaging insert 1 each 1 each    3 1 2 2 Mouse Rat Basic Kits  These Basic Kits is for mouse and rat assays     Component Vol    32 Tests  Vol    96 Tests     3x Mouse Rat Detection Ab Diluent 0 3 mL 0 85 mL  1x Streptavidin PE  SAPE  1mL 3 mL  10x Reading Buffer 1 5 mL 5mL    10x Wash Buffer 5mL 15 mL  PCR 8 tube Strip 2 each 2 each    3 2 Premixed Multiplex Kits       Each Premixed Muliplex Kit consists of a Premixed Analyte Kit  a Basic Kit for premixed panels and a  sample type specific Diluent Kit  order separately  Refer to section 3 3 for availabl
6.  Troubleshooting    Issue  Low event count    Low assay signal or  sensitivity    High Background    Low Precision    Clogged filter plate       Rev 1 3 11    Possible cause  Bead aggregate    Bead settle on  the well bottom    Vacuum too  strong       AimPlex     Multiplex Immunoassays for Flow       Recommended actions    Vortex stock and working bead suspensions well  before pipetting    Shake plates at 700 rpm for 30 seconds prior to  acquisition or resuspend the beads in a well by  pipetting up and down 6 8 times with a P200  pipette prior to transferring to a sample tube for  acquisition    Adjust the vacuum pressure so that 100 uL of 1x  Wash Buffer in the wells can be clear in 3 5 second        Standard not  reconstituted  well   Incubation time  too short   Excess exposure  to light    Standard s  should be incubated on ice for 5min  after the addition of standard diluent     Follow recommended incubation time in each step     During incubation  cover the plate with aluminum  foil to minimize exposure of the beads to light        Well to well  contamination    Change pipette tips after every transfer  Remove  plate seal carefully and avoid contents from one well  to mix with another        Poor pipetting  precision  Contamination  from   adjacent wells    Use calibrated pipettes     Avoid well to well contamination during pipetting  and removal of plate seal        High lipid  content in the  serum  plasma or  bodily fluid  samples    Centrifuge the samples at 10 000
7.  one extra  well of Standard 1 for instrument setup purpose     16      L a Bioprocess e AimPlex     O Development Co  L Multiplex immunoassays for Flow       10 3 Setting up a display layout template    10 3 1  Perform start up and verification of fluidic stability and optical alignment by following  cytometer manufacturer s recommendations   10 3 2  Open a new protocol   10 3 3  Create the following plots and histograms   1  A dot plot with FS  X axis  and SS  Y axis  in linear display mode   2  2 histograms of  PE Cy5  in Log display mode   3  2 dot plots with PE  X axis  and  PE Cy5   Y axis  in Log display mode   4  If PE Cy7 or APC channel is available  create 2 histograms of  PE Cy5  in Log display  mode and 2 dot plots with PE  X axis  and  PE Cy7  or  APC   Y axis  in Log display mode   10 3 4  Set all compensation to zero   10 3 5  Both Areas and Heights of the FL parameters should be collected   10 3 6  Save the protocol     10 4 Running the setup beads  10 4 1  Run the Blank beads prepared in Step 10 2 1   1  Adjust FS and SS gains so that the bead populations are on scale  Figure 1      2  Create Gate 1 for the smaller  4 micron size  S4  beads and Gate 2 for the larger  5 micron  size  S5  beads  Figure 1         a  Hames       Figure 1          D 16384 32768 49152 65536  FS    3  Apply Gate 1 to one of the  PE Cy5  histograms and one of the PE  PE Cy5  dot plots    4  Apply Gate 2 to the other  PE Cy5  histogram and the other PE  PE Cy5  dot plot   5  Adjust  P
8.  x g for 10 min at 2   8   C  Collect the serum  plasma or bodily fluid  fraction        21    Y L    Bioprocess   gt  Development Co  v    14 Blank Plate L    ayout    ZIILOL 6 8L 9SHrEZ       
9. E Cy5  PMT voltage so that all bead populations are clearly separated on the  histograms and dot plots  Figure 2      17  Rev 1 3 11    SL a Bioprocess e AimPlex     y e  Development Co  C  W    Multiplex Immunoassays for Flow       In this example  S4 has 4 bead populations  S4P3  S4P7  S4P9 and S4P11  S4P3  Size 4  micron  Peak  3  is the dimmest and S4P11  Size 4 micron  Peak  11  is the brightest     6  Adjust PE PMT voltage so that the dimmest bead population is positioned within the first  decade on the PE axis of the plot  Figure 2                   c w    eg     10   teg       PE Cy5    Figure 2             7  Save the protocol     10 4 2  Run the Standard 1 beads prepared in Step 10 2 2   1  Verify all the bead populations on the PE axis are on scale  Figure 3    2  Adjust PE PMT voltage if needed  If adjustment is needed  make sure rerun the Standard 8  and make sure the dimmest bead population is still visible on the PE  PE Cy5  dot plots        PE Cy5    Figure 3          3  Apply proper  PE Cy5     PE color compensation so that the bead populations are in a  horizontal position  see Figure 4 as an example of proper color compensation setting      18  Rev 1 3 11    L a Bioprocess e AimPlex     y e Development Co  L  wie immunoassays for Flow          Figure 4             Figure 5          4  Save the protocol    Note  If PE Cy7 or APC fluorescence channel is available  carry out Steps 10 4 1 and 10 4 2  for the PE Cy7 or APC channel for the proper PMT voltage and 
10. NR or Mouse Rat dAb  Diluent is needed     7 1 1  Determine the number of analytes in the panel  e g  a 7 plex panel    7 1 2  Determine the number of wells in the experiment  We recommend adding an additional 2  wells to account for pipetting recovery  For example  if a total of 48 wells is needed in the  experiment  prepare enough for 50 wells    7 1 3  Determine the total volume of working dAb solution needed for the experiment  Each  tube well needs 25 uL of the working detection antibody solution  The total volume is  calculated by multiplying the number of wells  calculated in Step 7 1 2   by 25 uL  For  example  50 wells x 25 uL   1 250 uL total working detection antibody solution    7 1 4  Determine the volume needed for each 25x Biotinylated Detection Antibody stock  i e  1 0  uL needed for each well   Therefore  for example  a total of 50 wells needs 50 uL of each  25x detection antibody stock    7 1 5  Determine the volume of 3x NR or Mouse Rat dAb Diluent needed to prepare the working  dAb solution     ___ uL from Step 7 1 3  3    wLof 3x NR or Mouse Rat dAb Diluent    For example  a total of for 50 wells  1 250   3   417 uL of 3x NR or Mouse Rat dAb  Diluent    7 1 6  Calculate the ddH O volume by subtracting the volume for each capture bead stock and 3x  3x NR or Mouse Rat dAb Diluent     _____ ul from Step 7 13       uL from Step 7 1 4x   number of Plex  Step 7 1 1     ul from Step 7 1 5   uL of ddH O    For example  a 7 plex panel for 50 wells  1 250   50 x 7 
11. ad stock    6 1 5  Determine the volume of 1x Reading Buffer needed to prepare the working bead suspension   Calculate the 1x Reading Buffer volume by subtracting the volume for each capture bead  stock     uL from Step 6 1 3     ___ uL from Step 6 1 4x   number of Plex  Step 6 1 1     uL of 1x Reading Buffer    For example  a 7 plex panel for 50 wells  2 250   50 x 7   1900 uL of 1x Reading Buffer    6 1 6  Add the appropriate volume  determined in Step 6 1 5  of 1x Reading Buffer to a test tube  labeled with  Working Bead Suspension     6 1 7  Centrifuge each capture bead vial at 2 000x g for 10 sec    6 1 8  Vortex each capture bead vial for 15 second    6 1 9  Add the appropriate volume  determined in Step 6 1 4   of each capture bead stock into the   Working Bead Suspension  tube    6 1 10  Vortex gently to mix  If not used immediately  store the working bead suspension at 2 8  C  with light protection  It can be stored at 2 8   C for up to 1 week     6 2 Premixed Multiplex Kits    The antibody coupled beads are provided as premixed ready to use 1x suspension  No preparation is  needed     11  Rev 1 3 11      7 L a Bioprocess     AimPlex     O Development Co  CH wes immunoassays for Flow       7 Preparing Biotinylated Detection  dAb  Antibody Working Solution    7 1 Single Plex Kits    The Biotinylated Detection  dAb  Antibody stock provided with each kit is a 25x concentrated stock  1 uL  per test   Dilution of the stock biotinylated dAb stocks to working solution with 
12. color compensation  usually  zero  settings     11 Analyzing the samples    If the flow cytometer does not equipped with a 96 well plate loader  resuspend the beads in a well by  pipetting up and down 6 8 times then transfer to a test tube for acquisition  Acquire 100 events each  bead population of the larger beads  Gate 2   For example  if there are 3 bead populations in Gate 2    larger beads   acquire 3 x 100   300 events per sample  We have found that as few as 50 events for a    bead population is sufficient     Save the FCS files for data analysis  FCAP Array 3 0 is recommended for data analysis     19  Rev 1 3 11    Multiplex Immun    SL a Bioprocess     AimPlex   y    Development Co  2 passays for Flow       12 Technical hints    12 3 1  Set up the EZPrep Filter Plate Washer according to the instruction in the Product Insert     Adjust the vacuum pressure so that 100 uL of 1x Wash Buffer in the wells can be clear in 3 5    second     12 3 2  When working with samples and standards  change the pipette tips after every transfer and    avoid creating bubbles when pipetting     12 3 3  We recommend  whenever possible  using a multi channel pipette for reagent additions to    achieve optimal assay precision     12 3 4  When applying plate seal to the filter plate  do not use a rubber roller  Use finger to gently    press over the plate seal to seal the plate   12 3 5  Sample handling     a     Cell Culture Supernatant  Remove particles by centrifugation and assay immediat
13. e Diluent kits  for 32  or 96 tests    3 2 1 Premixed Analyte Kit    Component Vol    32 Tests  Vol    96 Tests       1x Premixed Ab conjugated beads 1 5 mL 5 mL    2x Premixed Biotin dAbs 0 45 mL 1 5 mL    2x NR or Mouse Rat dAb Diluent    depending on the assay panel  0 45 mL 1 5 mL   Lyophilized Antigen Standards    with Standard Info   Sheet s  1 or multiple vials 1 or multiple vials     Antigen standards are supplied as premixed but can be in a single vial or multiple vials depending on       the panels  Refer to Standard Info Sheet for details     Rev 1 3 11    e   e  Y S   e Bioprocess e Ke AimPlex  O eve opment oO  6 Multiplex immunoassays for Flow       3 2 2 Basic Kit for Premixed Panels    Component Vol   32 Tests  Vol   96 Tests       1x Streptavidin PE  SAPE  1 mt 3 mL  10x Reading Buffer 1 5 mL 5 mi    10x Wash Buffer 5 mL 15 mL    PCR 8 tube Strip 2 each 2 each    Filter Plate and Lid 1 each 1 each  Plate Seals 3 sheets 6 sheets    User Manual 1 each 1 each  Packaging insert 1 each 1 each       3 3 Diluent Kits    Diluent Kits are sample type specific  Please indicate the sample type of your assay panel when placing  an order     3 3 1 CCS  Cell culture supernatant  Diluent kit    This kit is for cell culture supernatant samples  It is universal for all species     Component Vol   96 Tests     CCS Standard Diluent 2 5 mL  CCS Assay Buffer 8 mL    3 3 2 NR  Non Rodent  SPB  Serum Plasma Bodily Fluid  Diluent kit       This kit is for serum  plasma and bodily flu
14. e kit  8 1 2 1  Centrifuge the antigen standard vials at 2 000x g for 10 sec   8 1 2 2  Add 250 uL of CCS  cell culture supernatant   SPB  serum plasma bodily fluid  or TL   Tissue cell lysate  standard diluent into the first vial     Note  Reconstituted volume may be different for custom assay panels  Refer to the   Standard Info Sheet  enclosed in the kit for details     8 1 2 3  Vortex gently for 15 sec    8 1 2 4  Incubate on ice for 5 min   8 1 2 5  Vortex gently for 15 sec   8 1 2 6  Transfer the entire content to the next vial   8 1 2 7  Vortex gently for 15 sec    8 1 2 8  Incubate on ice for 5 min   8 1 2 9  Vortex gently for 15 sec   8 1 2 10  If more than 2 standard vials in the kit  repeat Steps 8 1 2 6 to 8 1 2 9 for the rest of the  vials     13  Rev 1 3 11    Y L   Bioprocess se AimPlex    O Development Co  L Multiplex immunoassays for Flow       8 2 Serial dilution preparation    Prepare 3x serial dilutions  160 ul in total  enough for duplicated wells  according to Table 1  Mix each  addition by pipetting up and down 6 8 times  Change pipette tips after each addition to avoid  contamination from one concentration to the other  Keep the standards on ice until use     Table 1  Preparation of antigen Standard Curve    Standard Amount from Previous Standard Diluent  uL   Standard  pL    Standard 1  Undiluted  Prepared in Section 8 1  Standard 2  1 3  80 160   Standard 3  1 9  80 160   Standard 4  1 27  80 160   Standard 5  1 81  80 160   Standard 6  1 243  80 160
15. ed at 2   8   C for up to 3 months     5 2 1x Wash Buffer    Bring the 10x Wash Buffer to room temperature and vortex for 15 seconds  Mix 15 mL or 5 mL of the  10x Wash Buffer with 135 mL or 45 mL ddH 0  respectively  The 1x Wash Buffer can be stored at room  temperature for up to 3 months     10  Rev 1 3 11    Y SL   Bioprocess e AimPlex     O Development Co  CH wes immunoassays for Fiow       6 Preparing Antibody Coupled Bead Working Suspension    6 1 Single Plex Kits    The capture bead stock provided with each kit is a 45x concentrated stock  1 uL per test   Dilution of the  stock beads to working suspension with 1x Reading Buffer is needed     6 1 1  Determine the number of analytes in the panel  e g  a 7 plex panel    6 1 2  Determine the number of wells in the experiment  We recommend adding at least 2  additional wells to account for pipetting recovery  For example  if a total of 48 wells is  needed in the experiment  prepare enough for 50 wells    6 1 3  Determine the total volume of working bead suspension needed for the experiment  Each  tube well needs 45 uL of the working bead suspension  The total volume is calculated by  multiplying the number of wells  calculated in Step 6 1 2   by 45 uL  For example  50 wells x  45 uL   2 250 uL total working bead suspension    6 1 4  Determine the volume needed for each 45x Analyte Specific Ab Conjugated Beads  i e  1 0  uL needed for each well   Therefore  for example  a total of 50 wells needs 50 uL of each  45x capture be
16. ely  or aliquot and store samples at  lt   80  C  Avoid repeated freeze thaw cycles    Serum  If using serum separator tubes  allow samples to clot for 30 minutes at room  temperature  Centrifuge for 10 minutes at 1 000x g  Collect the serum fraction and  assay promptly or aliquot and store the samples at  80  C  Avoid multiple freeze thaw  cycles  If serum separator tubes are not being used  allow samples to clot overnight at  2 8  C  Centrifuge for 10 minutes at 1 000x g  Remove serum and assay promptly or  aliquot and store the samples at  80  C  Avoid multiple freeze thaw cycles    Plasma  Centrifuge samples at 1 000x g at 4   C for 10 min within 30 min of blood  collection  Collect the plasma fraction and assay promptly or aliquot and store the  samples at  80  C  Avoid multiple freeze thaw cycles    Thaw frozen samples on ice and mix well prior to adding to the assay wells    If there is a high lipid content in serum  plasma or bodily fluid samples  centrifuge at  10 000 x g for 10 min at 2 8   C  Collect the serum  plasma or bodily fluid fraction for  the assays    If samples contain high analyte concentrations and need dilution for the assays  use  Sample Dilution Buffer  Part  P830100  for sample dilution  The exact dilution must be  determined empirically     12 3 6  If 30 uL of Assay Buffer and 15 uL of sample are added to a well  dilution factor is 3 when    calculating the final concentration     Rev 1 3 11    20    Y SL    Bioprocess  e  Development Co   W    13
17. id  SPB  samples from human  non human primate and other  non rodent  NR  species     Component Vol   96 Tests     NR SPB Standard Diluent 2 5 mL  NR SPB Assay Buffer 8 mL       3 3 3 Mouse Rat SPB  Serum Plasma Bodily Fluid  Diluent kit    This kit is for mouse and rat serum  plasma and bodily fluid samples     Component Vol   96 Tests     Mouse Rat SPB Standard Diluent 2 5 mL  Mouse Rat SPB Assay Buffer 8 mL       Rev 1 3 11    YSJ    Bioprocess o     AimPlex     e  Development Co  d itncten keemonoasiaya tor Hie  W    3 3 4 TL  Tissue cell lysate  Diluent kit    This kit is for tissue and cell lysate samples  It is universal for all species     Component Vol   96 Tests     TL Standard Diluent 2 5 mL  TL Assay Buffer 8 mL       4 Required Equipment Not Supplied    e Barnstead Lab Line Titer Plate Shaker  Thermo Scientific  Waltham  MA  or equivalent   The shaker should have a 3mm orbit with ability to maintain 600 800 rpm    e AimPlex    EZPrep Filter Plate Washer  PN  VM1001     e Vacuum source for the filter plate washer  An economy vacuum pump  e g  Barnant Model  400 1901 or equivalent  is recommended    e Flow cytometer capable of detecting forward scatter  side scatter  PE and APC  or PE   Cy5      5 Preparing 1x Reading Buffer and 1x Wash Buffer    5 1 1x Reading Buffer    Bring the 10x Reading Buffer to room temperature and vortex for 15 seconds  Mix 5 mLor 1 5 mL of the  10x Reading Buffer with 45 mL or 13 5 mL ddH 0  respectively  The 1x Reading Buffer can be stor
18. nan an theeeasttsteeen Oi la ankete tees 10  5 2 DKW a SAB EE 10  6 Preparing Antibody Coupled Bead Working Suspenslon  11  6 1 KT WT EE 11  6 2 Premixed Multiplex Kits Yow  pete eta ak yabe ai aneyee so due van eee sos aa s oton Eza da Eed depan ses bien dp Ee 11  7 Preparing Biotinylated Detection  dAb  Antibody Working Solution    12  7 1 Sinple  EE 12  7 2 Premixed Multiplex Kits wiii keaktksaat ae ae sara sike es   ae ake dak Ge raai da ako spes a d   EES ad asse n site t  s sis EE 13  8 Preparing Antigen Standarde eee aa aaaaat aaa ae a aaa aaatestese se toaooooeossesesetooooooeoeoeseeseuoooooooosenenon 13  8 1 Reconstitution of the lyophilized standards            nnsneseeeensnssnsesenresnssssrsennrssssesrrennessssesrreesnssssenns 13    Rev 1 3 11      7 L a Bioprocess e AimPlex      O Development Co  CH wes immunoassays for Fiow       8 1 1 If there is only one standard Vial in the Kit             ccccccessececssssececsesaeceesesaeeeeseseeeeeseaeeeeseaaes 13  8 1 2 If there are multiple standard vials in the Kit    cccccsesssecccecessessaeceeeeseessesseaeeeeeesseeeees 13   8 2 Serial dilution preparation           ccccccccccecssssssssececececsesecesecececeseesesaeeeeeessesseseeaeeeseessesseseaeeeseeseeeeees 14   9   PErFOFMING  THE ASSAY Zeene REESEN EENS a n ae dan es manke 14  10 Setting Up FlOW CYt  M ETENS getesselt ageet is e pate ki ii n ae e eet a pale ea aa 16  10 1     Fluorescence CHAN NE IS  vie kanon bes kke dok man kana a EAR ESA EEN 16  10 2 Preparing in
19. on of the bead classification dye is at 700 nm  It can be detected on  PE Cy5   channels of most of the flow cytometers with blue  488 nm  excitation  It can also be detected on PE   Cy7 channels with blue  488 nm  excitation or APC channel with red  635 or 640nm  excitation if such a  florescence channel is available     The reporter dye of the AimPlex assays is PE and can be detected on the PE channel with blue  488 nm     excitation     10 2 Preparing instrument setup beads    10 2 1     10 2 2     Rev 1 3 11    Blank beads  Aliquot half  e g  75 uL if resuspension volume in Step 9 29 is 150 uL  of bead  suspension from one of Blank wells from Step 9 32 into a sample tube or a well of a 96 well  plate depending on the sample loading mechanism of a flow cytomter  Add 100 to 300 uL of  1x Reading Buffer to the tube well  Remaining capture bead working suspension from Step  9 3 can also be used for this purpose    Standard 1 beads  Aliquot half  e g  75 uL if resuspension volume in Step 9 29 is 150 uL   bead suspension from one of the Standard 1 wells from Step 9 32 into a sample tube ora  well of a 96 well plate depending on the sample loading mechanism of a flow cytomter    Add 100 to 300 uL of 1x Reading Buffer to the tube well     Note  Add 75 uL   150 uL of 1x Reading Buffer to the Blank and Standard 1 wells   Acquisition for both wells will be slower  less bead concentrations  during the sample  acquisition step  When running a panel the first time  we recommend running
20. ope of the  protein  followed by a streptavidin R phycoerythrin treatment  The fluorescent intensity of R   phycoerythrin on the beads is quantified on a flow cytometer  Concentrations of a protein of  interest in the samples can be obtained by comparing the fluorescent signals to those of a  standard curve generated from a serial dilution of a known concentration of the analyte     The assay procedure consists of a 60 min antigen and capture antibody conjugated bead  incubation step  a 30 min biotinylated detection incubation step and a 20 min streptavidin PE  incubation step     Assay Protocol Overview     Add Ab beads to    wells Total Assay time    2 hours    1  Remove  S Add standards and    samples to wells    1  1hour  RT  make N Add biotinylated    2  Wash  3X  antibodies to wells  1  30 min  RT  dile Se  2  Wash  3X     1  20 min  RT  shaking  2  Wash  2x   3  Add Reading Buffer                   Add streptavidin   PE        Read ona flow  cytometer       Data analyzed by Soft Flow   s FCAP Array v3    RT  room temperature    Rev 1 3 11      L a Bioprocess e AimPlex     O Development Co  CH wes immunoassays for Fiow       2 Available AimPlex Immunoassay Kit format  2 1 Single Plex Kits    All available AimPlex immunoassays are grouped as 12 24 analytes per group  Each analyte in a Group  has a unique bead region and can be multiplexed together in any combination  Analytes in different  groups may be multiplexed together but may have some cross reactivity because cros
21. opment for analytes not  currently available  We will work with you to design the panels and assays  Please contact us for pricing   lead time and details of those offerings     We also offer custom bulk packaging  usually in 5 plate size  Please contact us for details     Rev 1 3 11    Bioprocess  Ai    Y SL g Ben yen AimP lex     3 Supplied reagents and materials    3 1 Single Plex Kits    Each Single Plex Kit consists of 1 or more user selectable Analyte Kits  a Basic Kit and a sample matrix  specific Diluent Kit  refer to section 3 3 for available Diluent kits  for 96 tests  Some of the single plex  kits are available as 32 tests     3 1 1 Analyte Kit    Each 96 test Analyte Kit consists of the following components  If multiple analyte kits are ordered  all  the components are shipped in a single Analyte Kit box      Component    45x Analyte Specific Ab conjugated beads  e g  45x S4P7 human IL 2   S4   Size 4um beads  P7   Peak 7 of the 44m beads     25x Analyte Specific biotinylated detection Ab  e g  25x Biotin human IL 2 0 1 mL  dAb  Lyophilized Antigen Standard  1 vial       Each vial may contain one or multiple antigens  refer to lot specific Standard Info Sheet for details        Each 32 test Analyte Kit if available consists of the following components  If multiple analyte kits are  ordered  all the components are shipped in a single Analyte Kit box      Component   45x Analyte Specific Ab conjugated beads  e g  45x S4P7 human IL 2    S4   Size 4um beads  P7   Peak
22. s reactivity of all  the assays across different groups was not validated  We offer custom multiplex assay panel design and  development  Please contact us for details including pricing and lead time     Note  Bead set assignment may vary in a panel  Refer to packaging product inserts and kit labels for  details     Each Single Plex Kit consists of 1 or more user selectable Analyte Kits  a Basic Kit and a sample matrix  specific Diluent Kit  Each Analyte Kit contains analyte specific Ab conjugated beads  detection  antibody ies  and corresponding antigen standard s   The Basic Kit has species specific detection  antibody diluent  reading buffer  wash buffer  Streptavidin PE  SAPE   filter plate and plate seals  The  Diluent Kit contains sample type specific Standard Diluent and sample Assay Buffer  Some of the single   plex kits are available in both 96  and 32 test sizes     2 2 Premixed Multiplex Kits    Each Premixed Multiplex Kit has a pre defined multiplex panel with premixed antibody conjugated  beads  antigens and detection antibodies  Except the Reading Buffer  10x  and Wash Buffer  10x   all the  reagents are supplied as ready to use  Most of the premixed multiplex kits are available in both 96  and  32 test sizes     Note  Bead set assignment may vary in a panel  Refer to packaging product inserts and kit labels for  details     2 3 Custom panel and assay development and custom bulk packaging    We offer custom premixed multiplex panels as well as custom assay devel
23. several layers of paper towels to remove residual buffer  on the plate bottom after the last wash    Add 25 uL of streptavidin PE working solution to each well    Cover the plate with a plate seal    Incubate on the shaker  set at 700 rpm  for 20 min at room temperature  Protect from light   Remove the plate seal    Remove solutions in the wells by using the EZPrep Filter Plate Washer     Wash the wells twice with 100 uL 1x Wash Buffer    Gently tap the plate bottom onto several layers of paper towels to remove residual solution   Add 150 uL to 300 uL of 1x Reading Buffer to each well depending on the sample loading  mechanism of a flow cytomter to resuspend the beads    Cover the plate with a plate seal    Place the plate on the microtiter shaker and shake for 30 seconds at 700 rpm     Note  If the flow cytometer has no 96 well plate loader and more than 200 uL of 1x  Reading Buffer is needed to resuspend the beads  do not shake the plate  Resuspend the  beads in each well by pipetting up and down 6 8 times with a P200 pipette then transfer to  a test tube for acquisition     15      7 L   Bioprocess     AimPlex   E Development Co  chter kiarigis or Fie       9 32   9 33     Remove the plate seal   Read on a flow cytometer     Note  If the assayed plate is not read immediately  it can be stored at 2 8  C for up to 16 hr   The plate should be sealed with a plate seal and protected from light     10 Setting Up Flow cytometers    10 1 Fluorescence channels    The maximum emissi
24. strument setup DEAS te aaaaaooseesesesooooooooseesesseoeoooooosoesenaaoonoon 16  10 3 Setting up a display layout template            cccccccssscesssecsseceessececsseceseecsseecesaecesseeesseeceaeeeeaaeeesees 17  10 4  Running the setup Dead sivsesdscccicssscesetecaceg vanse ge onina dok elan pan Ea iaaea E EE 17  11 Analyzing the samples ue 19  12 UE nl Ru ne 20  13 leif aile  el NO kone e tike ket leaves ki e kn va n ou Nen n to ki e te n kaa a sane e an En n ki a ee ea aaa ete e a 21  14 Blank Plate  Lay OU    wk s   v   ai says kai aaa dw ea ia ti di n aa Fo kan plim  sann  a ame od a D   pa inn A den Yn 22  4    Rev 1 3 11    Y   Bioprocess Al    SL e  Development Co  2   AimPlex    kK4    1 How It Works    AimPlex multiplex assay technology utilizes multiple bead populations differentiated by size and  different levels of fluorescence intensity  With multiple sizes of beads and multiple levels of  fluorescence intensity in each bead size  the AimPlex technology can measure up to 24 analytes  simultaneously in a single reaction  The bead populations in the reaction are determined by a  flow cytometer equipped with a 488nm laser  The maximum emission of the bead classification  dye is at 700 nm     Similar to the principle of a sandwich ELISA  each bead population conjugated with a specific  capture antibody traps the protein of interest  such as a cytokine  in the sample  The amount of  the analyte captured is detected via a biotinylated antibody against a secondary epit
25. uestions or comments        Copyright 2012 YSL Bioprocess Development Co  All rights reserved     Rev 1 3 11      7 L a Bioprocess     AimPlex   E Development Co  attirer tor F  k    Contents  1      HOW e 5  2 Available AimPlex Immunoassay Kit format rete aetaatattsseaeaoaoooooossesesetooooooooeseseesenosooooonn 6  2 1 KINN WC 6  2 2 Premixed Multiplex Kifer ebe soon end  ks eege ee ere ege vi aaa e 6  2 3 Custom panel and assay development and custom bulk packaging          sssesssessnssesesssenrnssesssereene 6  3 Supplied reagents and materials  7  3 1 Sinell TE WEE H  3 1 1 Analyte EE 7  3 1 2 Baie KI E E disi E ke ke ai oke PO ke DA kan ees eee ees 7  3 2 Premixed Multiplex Kits          ccccccccccsssssssecececeesesecseseeeeecessesesaeeeeeeeceeseseeaeseeecsceeesaeaeeeeeeesseseaeaeeeesens 8  3 2 1 Premixed Analyt    it ccs ieren eng Ee Een Ee no ai de a ees 8  3 2 2 Basic Kit for Premixed Panels sis cc s cuiscecsscceesedeace akse ake vote caus REENEN skin da EES NEO 9  3 3 DIEM  dE 9  3 3 1 CCS  Cell culture supernatant  Diluent Kit    9  3 3 2 NR  Non Rodent  SPB  Serum Plasma Bodily Fluid  Diluent kt    9  3 3 3 Mouse Rat SPB  Serum Plasma Bodily Fluid  Diluent kp  9  3 3 4 TL  Tissue cell lysate  Diluent kt  10  4 Required Equipment  Not  Supplied  eegene deed ee ceeesdssanteeieesceesesasaveel seneedveesandiei e geen 10  5 Preparing 1x Reading Buffer and 1x Wash Butter  10  5 1 Tx Reading BUR tccsscets castasecesisn cs e swa odyo sisan an fri fose taka save pa age ed a
    
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