Things to Test
Contents
1. Flatten plane from measure lines heck for reasonable results use flat or Z and colormap Flatten plane reates a new calculated plane such hat the intersections of the measure lines and the source height plane lie in XY plane Make 2 calculated planes with same name Should replace the old plane and any planes derived from the old plane should be removed Apply rulergrid Change spacing angle color opacity Move measure lines with toggles on Toggles off move lines when toggles turn on rulergrid should jump to line positions est Phantom button as toggle try it or feeling Pushing it once should do he same as holding it down Pushing it a second time should be like releasing it After using Phantom successfully hutdown nano unplug Phantom from PC restart nano Crash Error msg ry Tools Phantom Reset Phantom repeatedly After using Magellan successfully hutdown nano unplug Magellan afa restart nano Result Error dialog after Magellan Reconnect to Magellan repeatedly moving the puck o cause a failure Result Error dialog n a hen moving puck successful onnection when not moving puck Magellan buttons should all function a as labeled in the main window Main n a indow Magellan button images hould function as well Moving the plane with the Magellan hould be disabled while in touch n a mode User manual Compare all menus and windows to he documentation on2. do a short modification sharp freehand direct Z control freehand direct Z control ee ee FS harp sharp 3D slow line slow line make sure that for line slow line 3D low line all points are scanned and reported updatable queue turned of observe that for freehand eeling modify modes points will be kipped if the hand is moved too quickly for the server to keep up updatable queue turned on optimize now mode line and area Results O ooo d age a ee ollection Save a mod file and read into Kecdge Pd nano should ask for a streamfile name if you don t specify one when onnecting to a microscope Test with both command line and interface Select mode es Choose a new region hitconmit SSS Thermo interaction O oo o o and make sure proper SPM choices are available Quit a a after Nano is connected Result Nano a a warning dialog hile connected choose Analysis mode in Topo Result All nano ontrols that change SPM params are disabled and re enabled when hermo goes back in Aquire mode Connect nano to thermo Quit nano reconnect to the already running hermo hile saving stream file File Close hen open that stream file make sure it was saved and e Phantom modes Prana modes o Check modes Grab Light Check modes Scale Up Scale Down Scale about intersection of green line ith surface Correct scaling when z cale is not 1 ouch stored Tools Phantom
3. being recognized see can data coming in Command line args Open a stream ile from the command line Specify z cale time colormap colorplane heightplane Make sure to try heightplanes other than just opography Forward Save a screen shot in TIFF PNM PEG and PPM formats View with external program Save with and ithout screen text Save plane as a Topo file Load this ile into Topo software Also save a opo file of a partial scan load into opo software Passable Issue file appears blank in Topo until leveled Make sure you can replay a stream file or multiple devices afm and vi curve or example by specifying d ile lt filename gt div file lt filename gt vic on the command line A a a color map Drag scaling i e a and see map change Does colormap display correctly on new strips during streamfile replay live Desired result consistent olors for all new data strips even if data min max change Change scaling triangles during rapid replay Desired result no tri strips hould be lost ignored Apply contour lines Initial color OK Change spacing Change color Change width Apply colormap after contour and ontour after color map issue ontour turns off if colormap activated isualization settings ee ee different n a ma S ee Measure mode allows you to move measure lines check for reasonable results Measurements should not change if z scale is changed lt
4. hange spring constant Green aim line present in Grab Scale ouch Touch Stored not present in Measure Light Surface Viewwindow O ooo o Initial position OK resizable with graphics in reasonable places File I O Open Static File Topo file version 4 and version 5 If it s the first file height plane should switch automatically from empty height plane to loaded file Open Static File Device and treamfile controls disabled when iewing static file Open Static File PPM file Oriented orrectly Stream file replay all device controls hould be disabled Image and mod indows should display correct parameters even though you can t hange them Open same streamfile twice should rewind to the beginning make no Open and play VRPN 4 x stream file hrough to the end tubes1 nms to 377 seconds Open and play VRPN 5 x stream file hrough to the end polymer 8 16b nms to 3222 seconds During stream file replay test replay ontrols Check freeze and resume Check rewind Check Jump to time both before and after the current time should also work while replay is rozen Open stream file use Jump to time to jump past some modifications Go to Save Mod data and make sure the mod times in the list are correct they houldn t all be the time you started he jump tream file stream time should show as less than the time typed into jump o time box try rewind Make sure messages are
5. This is a list of features in the nanoManipulator software which should work before doing a release These should serve as a regression test before each release of the software All the features added and bugs fixed ince the last release Set up Topo code to do oscillating and ontact mode imaging Set the parameters Make sure nano displays initial mode and parameter as on topo Make image mode oscillating contact ransition with nM Change setpoint PID make sure they change in Topo oftware as well Make sure setpoint units are nA for contact and for phase oscillating for amplitude oscillating Quick and Full control panels should orrespond Changes to Quick immediately reflected in both nano and topo Changes to Full stay local until Accept is pressed then Quick and Thermo both change Multiple scan planes Test acquiring more data layers with Thermo Setup Acquire and Nano Setup Datasets Make sure data is always delivered to he correct plane in nano even when adding and removing data layers moving and destroying data windows in topo Note nano will not update hen scanning is stopped StaiStop Scan hintawviiosaming sn ithdraw while Scan Age charge on Haran nano eee make sure it tracks Grid resolution change on thermo and nano side make sure it tracks No egfaults or GL errors for small grid izes on Nano side Make sure updates to nano don t fall behind at low grid resolution Modifymodes _ l
6. e for a user in private space only one pointer should be visible for a user in shared space whose peer is private private space should have the state it was left in before shared was entered Go into shared state change some things and then return to private state Ensure that all variables changed in shared state have returned to their former values of private state Microscope sharing first user to connect should get the lock user with the lock should be able to do anything to the microscope user without the lock shouldn t be able to do anything to the microscope user with the lock should be able to give up and reacquire user without the lock shouldn t be able to acquire when it s held by another user who doesn t have the lock should be able to acquire when its owner gives it up Features not shared Guarded scan mode an imaging mode Direct Step controls a modification mode Keithley V I meter controls from the Tools menu Strip chart configuration Registration controls Cross section tool Phantom settings
7. hese is a separate excel preadsheet that lists which ombinations of mode stvle tool and ontrol are valid Make sure what nano does matches this spreadsheet Oscillating es ee harp freehand D ee others assumed same as contact mode Gotat O 0 SS S SoS sharp freehand Oooo Magellan and mainwin buttons Perform at least one manipulation with a off center scan region with a non ero scan angle Make sure modification appears in the right place Freehand Commit and cancel buttons on button box and mainwin Hold Phantom button then do ommit cancel harp line do a polyline Do polyline hen back out with cancel before you hit commit Then do a polyline and a make sure no old points are used in urrent line Commit and cancel buttons on box ang mainwin sharp const ine A harp slow line more than 2 points Follow with another slow line or line and make sure no old points are used in current line weep freehand Sweep angle fotominedby Phantom ponwet line even if scan is rotated Arcs at polyline vertices Cid determined by Phantom pen twist pi o line even if scan is rotated No arcs at polyline vertices unless someone ants this as a feature ewing freehand be careful about etting inter punch distance to be a reasonably large number relative to he scan region like 1 500 of the scan region width a aS orce curve sena e Can take a long fs ime for many points
8. line Note which eatures need documentation Other applications released vi curve client and server phantom server button box server registration server SEM server Thermo Topo AFM server afmsim Test Protocol for Collaborative nanoManipulator Hardware setup Two systems PC or SGI Phantom for each system Make sure both systems are synchronized using Dimension4 Features to test Connection to collaborating peer Shared space both pointers should be visible when both users are in shared space both pointers should be correctly labeled with their user s current mode both users should see the same surface rotation and translation changes of height plane rulergrid on and off same time in the streamfile within a few percent all variables text boxes and other visible elements of state should have the same value for both users see below for features not shared changes to any variable etc in the interface by one user should be immediately reflected in the other user s interface Switching from private to shared calculated planes declared by the other user should be acquired calculated planes declared while private should be acquired by the other user if they are in shared Data sources you cannot open close or otherwise change your data source once you begin collaborating a Static file stream file or live microscope can be used collaboratively Switching from shared to private only one pointer should be visibl
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