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        Mouse iPS Cell Lines (Matched Sets)
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1.  50 times before differentiation   B  Culture Conditions for MEF Feeder Cells  1  Required media and reagents    Reagent Information    MEF Medium DMEM containing 10  FBS  2 mM glutamine   1x10  M nonessential amino acids and 50 U  and 50 ug ml penicillin and streptomycin     2x Cold 20  DMSO and 80  FBS  Freezing  Media    Mitomycin C 1 mg ml  solution       2  Gelatin treatment of plates for MEF feeder cells    1  Add enough sterile  autoclaved 0 1  gelatin to cover the bottom of the wells   Approximate amounts  10cm plate     5 ml   6 well     1 5 ml  well   24 well     0 5 ml  well   96 well     100 ul  well    888 266 5066  Toll Free  650 968 2200  outside US  Page 3    System Biosciences  SBI  User Manual  2  Incubate the gelatin coated dishes for at least 15 min at 37  C   3  Aspirate excess gelatin solution before use     3  Thawing MEF cells  To insure the highest level of viability  be sure to warm medium to 37  C before using it on the cells  Cells should be  plated at a minimum cell density of 10  cells  cm        1  Remove the vial from liquid nitrogen and thaw quickly in a 37  C water bath     2  Remove the vial from the water bath as soon as the cells are half thawed  and sterilize the tube by spraying  with 70  ethanol     3  Transfer the cells with 10 ml of MEF medium to a 15 mL conical tube and pellet the cells by centrifugation at  200 g for 5 min     4  Discard the supernatant and resuspend the cells with 10 ml fresh MEF medium and plate the cells at seed 
2.  cell culture  The methods for culture are nearly identical to mES cell  culture  although more careful maintenance will be required     The MEF cells provided in the iPSC kit are meant to be used as source cells only and not as feeder cells for  culturing iPS cells  MEF cells for feeder cells can be obtained from Applied Stemcell  Inc   http   www appliedstemcell com      Page 2 ver  3 112113 www systembio com    iPS Cell Lines Cat    SC201A 1    I  Mouse iPS Cells    A  Description   Mouse induced pluripotent stem cells  iIPSCs  Cat  SC201A iPSC  were generated by transducing genetically  unmodified mouse embryonic fibroblasts with viruses individually encoding the four murine transcription factors   Oct4  Sox2  KIf4  and c Myc  that have been shown to induce the reprogramming of somatic cells to a pluripotent  state  The cells were derived using morphological selection criteria and without the use of fluorescent markers or  drug selection  When cultured under standard mouse ES cell culture conditions  the morphology of SBI mouse iPSCs  are identical to that of mouse ES cells  The cells also express the pluripotency markers SSEA 1 and Nanog  and  demonstrate strong endogenous AP activity     Mouse iPS cells should be grown on a feeder cell layer  Appropriate feeder cells for mouse iPS cells are mouse  embryonic fibroblasts  MEFs  available from Applied Stemcell  Inc  htto  Avww appliedstemcell com       Mouse iPS cells from SBI are provided at passage 10 and can be passaged
3.  density of 10   cells  cm      5  Incubate at 37  C with 5  COs  until the cells reach 80 90  confluency     6  Change medium twice a week or when pH decreases   4  Passaging MEF cells    Cells should be split when they reach confluency  We recommend splitting the cells based on 0 5x10  cells  cm        1  Discard the medium and wash the cells once with PBS    2  Aspirate PBS  and add 2 ml per T75 flask of 0 25  trypsin EDTA  and incubate for 2 min    3  Add 5 ml of MEF medium  and break up the cell clumps by gently pipetting up and down several times   4  Transfer cells into a conical tube and centrifuge at 200 g for 5 min    5  Discard the supernatant and resuspend the cell pellet in 10 ml MEF medium    6  Count the number of cells  plate cells at 0 5x10  cells  cm  and incubate at 37  C with 5  COs     5  Freezing MEF cells  1  Follow steps 1 4 from the Passaging MEF cells protocol  above    2  Discard the supernatant  and resuspend the pellet in MEF medium   3  Count the number of cells and adjust the cell suspension to 4 x 10   cells  ml   4  Add equal volume of cold 2X Freezing Media to the cell suspension   5  Aliquot 1 ml of suspension into each cryovial  2 x 10   cells  vial    6  Place the vials in a cell freezing container and keep itat  80  C overnight     7  Transfer the vials to a liquid nitrogen tank for long term storage     Page 4 ver  3 112113 www systembio com    iPS Cell Lines Cat    SC201A 1    6  Mitomycin C treatment of MEF  Mitomycin C acts to halt th
4. 1  5  Add 2 ml of mouse ES medium  and suspend the cells by pipetting up and down to single cell suspension   6  Transfer the cell suspension to a 15 ml conical tube and spin the cells at 200 g for 5 min     7  Add 2 ml of ES medium to the plate and suspend the cells by pipetting up and down to single cell  suspension     8  Distribute  0 2 ml of the mouse iPS cell suspension to each well of the 6 well plate  Right after plating iPS  cells  gently swirl the plate back and forth and side to side and incubate at 37  C with 5  CO2 until the cells  reach 80  confluency     888 266 5066  Toll Free  650 968 2200  outside US  Page 7    System Biosciences  SBI  User Manual    9     The ES media must be changed every day and mouse iPS cells subcultured  1 10 every 2 3 days  Track the  passage number of the iPS cells     3  Freezing mouse iPS cells    D    Grow cells to the exponential phase in a 6 well plate    Aspirate the medium  and wash the cells twice with 2 ml of PBS    Add 0 5 ml 0 25  trypsin EDTA and incubated for 2 min at 37  C    Add 2 ml of mouse ES medium  and suspend the cells by pipetting up and down to single cell suspension     Transfer the cell suspension to a 15 ml conical tube  count the number of cells and spin the cells at 200 g for  5 min     Discard the supernatant  and resuspend the cells with mouse ES medium to the concentration of 1x10   cells  per ml     Add equal volume of 2x freezing medium and aliquot it at 0 5 ml per vial   Put the vials in a cell freez
5. SSBI    System Biosciences       Mouse iPS Cell Lines   Matched Sets     Cat   SC201A 1       User Manual    Store kit at  80  C on receipt    A limited use label license covers this  product  By use of this product  you  accept the terms and conditions outlined  in the Licensing and Warranty Statement  contained in this user manual      ver  3   112113     iPS Cell Lines Cat    SC201A 1    Contents   l     MOUSCIPS  Celsia aeea a 3  A DOSCIIPLION enesis tirai iniiai aioa a aa eaaa 3  B  Culture Conditions for MEF Feeder Cells                 cceseeeerees 4  C  Growth Conditions for Mouse iPS Cells saec 8  D  Validation of Mouse iPS CellS              cccccsseeeeeeeeeeeeeteeseeeees 8   Il  PREPETON COS sian te sacecgencenide ne tuts bbecevsdeethesdectescceantd duchies aiai 11   III  Technical Support          ceeeeeeeeeeceeeeeeeeeeeeeeeeeeeeseaeeeeeeeeaes 12   IV  Licensing and Warranty Statement    13    888 266 5066  Toll Free  650 968 2200  outside US  Page 1    System Biosciences  SBI  User Manual    List of Components  Each iPS cell line set comes as one vial of MEF derived mouse iPS cells and one vial of MEF at 2 x 10   cells each     Mouse iPS Cell Line Set    See   MEF  amp  iPS cells     2x10 5 cells each       The product is shipped on dry ice and should be immediately stored in the gas phase of liquid nitrogen     In general  iPS cells are challenging to culture and should only be operated by researchers experienced in the  intricacies of mouse embryonic stem  MES 
6. e division of MEF cells so that they can be used to condition the medium for human iPS  cells  MEF cells should be at confluence when treated with mitomycin C     1  Add 6 ml of fresh MEF medium contain 50 ul of mitomycin C solution  1 mg  ml  to one T75 flask of confluent  MEF cells  and swirl it briefly  The final concentration of mitomycin C is 8 ug  ml     2  Incubate at 37  C for at least 3 hrs   3  Aspirate the mitomycin C containing medium off the cells and wash the cells twice with 10 ml PBS     4  Aspirate PBS and add 1 ml of 0 25  trypsin EDTA  swirl to cover the entire surface  and incubate for 2 min  at room temperature     5  Add 5 ml MEF medium and break up the cells to a single cell suspension by pipetting up and down  Count  the number of cells     6  Seed the cells on gelatin coated dishes  3 x 10   cells per 100 mm dish  or 5 x 10   cells per well of a 6 well  plate      7  Cells should be ready to use by the next day     888 266 5066  Toll Free  650 968 2200  outside US  Page 5    System Biosciences  SBI  User Manual    C  Growth Conditions for mouse iPS cells    1  Required Media and Reagents    Reagent Information    Mouse ES DMEM containing 15  FBS  2 mM   Medium glutamine  0 1M nonessential amino acids   0 1 mM 2 mercaptoethanol  10   U ml LIF   50 U and 50 ug  ml Penicillin and  Streptomycin    2x Cold 20  DMSO and 80  FBS  Freezing Media    Trypsin EDTA GIBCO       1  Thawing Mouse iPS cells  To insure the highest level of viability  be sure to warm m
7. edium to 37  C before using it on the cells     6     Remove the vial from liquid nitrogen and thaw quickly in a 37  C water bath     Remove the vial from the water bath as soon as the cells are half thawed  and sterilize by spraying with 70   ethanol     Transfer the cells with 10 ml of mouse ES medium to a 15 mL conical tube and pellet the cells by  centrifugation at 200 g for 5 min     While centrifuging  remove MEF medium from the feeder cell plates  and wash the wells twice with DMEM   Then add 1 ml of mouse ES Medium     Discard the supernatant from the mouse iPS cells  and resuspend cells with 1 ml fresh mouse ES medium   Plate the cells on MEF feeder cells in a 6 well plate     Incubate at 37  C with 5  CO  until the cells reach 80  confluency  The ES media must be changed every  day     2  Maintenance of mouse iPS cells  It is important not to keep mouse iPS cells in culture for long period of time without passaging  to maintain the  pluripotency     1     Aspirate the medium and wash the cells twice with 1 ml PBS   Remove PBS completely and add 0 5 ml of 0 25  trypsin EDTA solution  and incubate at 37  C for 2 min     While incubating  remove a 6 well plate of feeder cells  mitomycin C treated MEFs   Aspirate the medium  and add 2 ml of mouse ES medium to each well     Remove the plate containing mouse iPS cells from the incubator and swirl to dislodge the cells from the  bottom of the plate     Page 6 ver  3 112113 www systembio com    iPS Cell Lines Cat    SC201A 
8. hould be used in accordance with the NIH guidelines developed for stem cell research     888 266 5066  Toll Free  650 968 2200  outside US  Page 9    System Biosciences  SBI  User Manual    SBI has pending patent applications related to the Product  For information concerning licenses for commercial use   contact SBI     Purchase of the product does not grant any rights or license for use other than those explicitly listed in this Licensing  and Warranty Statement  Use of the Product for any use other than described expressly herein may be covered by  patents or subject to rights other than those mentioned  SBI disclaims any and all responsibility for injury or damage  which may be caused by the failure of the buyer or any other person to use the Product in accordance with the terms  and conditions outlined herein     Limited Warranty   SBI warrants that the Product meets the specifications described in this manual  If it is proven to the satisfaction of  SBI that the Product fails to meet these specifications  SBI will replace the Product or provide the purchaser with a  refund  This limited warranty shall not extend to anyone other than the original purchaser of the Product  Notice of  nonconforming products must be made to SBI within 30 days of receipt of the Product     SBI   s liability is expressly limited to replacement of Product or a refund limited to the actual purchase price  SBs  liability does not extend to any damages arising from use or improper use of the Prod
9. ing container  and store them at  80  C overnight     Transfer the vials to a liquid nitrogen tank for long term storage     Validation of mouse iPS cells    SSEA 4 1 Nanog          r  ig       AlkPhos Terat       ie    omas    Stem cell markers for SSEA 1 and Nanog were determined by immunocytochemistry using primary antibodies for  SSEA1  Millipore  and Nanog  Abcam  followed by Alexa Fluor fluorescent labeled secondary antibodies  Invitrogen    Detection of Alkaline Phosphatase activity was performed using the AP Detection Kit  Millipore   Teratoma assays  were performed by subcutaneous injection of 1x10   iPS cells into the dorsal flank of SCID mice  Teratomas were  visualized 4 weeks later with hematoxylin and eosin staining     Page 8 ver  3 112113 www systembio com    iPS Cell Lines Cat    SC201A 1    ll  References  Rossant  J  2007  Stem cells  The magic brew  Nature 448  260 262     Takahashi  K  and Yamanaka  S  2006  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast  cultures by defined factors  Cell 126  663 676     Takahashi K  et al  2007  Induction of pluripotent stem cells from adult human fibroblasts by defined factors  Cell   131  861 72     Park  IH et al  2008  Reprogramming of human somatic cells to pluripotency with defined factors  Nature  451 141 6     Baker  Monya 2007  Adult cells reprogrammed to pluripotency  without tumors  Nature Reports Stem Cells  2007     12 11     Nakagawa  M et al  2008  Generation of induced plur
10. ipotent stem cells without Myc from mouse and human  fibroblasts  Nature Biotechnology  26  101   106     Okita  K  et al  2007  Generation of germline competent induced pluripotent stem cells  Nature  448 313   7    Yu  J  et al  2007  Induced Pluripotent Stem Cell Lines Derived from Human Somatic Cells  Science 318  1917   1920     lll  Technical Support    For more information about SBI products or to download manuals in PDF format  please visit our website     http   www systembio com    For additional information or technical assistance  please call or email us at     tech systembio com  650 968 2200    IV  Licensing and Warranty Statement    Limited Use License   Use of the human and mouse iPS cells  i e   the    Product     is subject to the following terms and conditions  If the  terms and conditions are not acceptable  return all components of the Product to System Biosciences  SBI  within 7  calendar days  Purchase and use of any part of the Product constitutes acceptance of the above terms     The purchaser of the Product is granted a limited license to use the Product under the following terms and  conditions     e The Product shall be used by the purchaser for internal research purposes only  The Product is expressly  not designed  intended  or warranted for use in humans or for therapeutic or diagnostic use    e The Product may not be resold  modified for resale  or used to manufacture commercial products without  prior written consent of SBI    e This Product s
11. uct  or losses associated with  the use of additional materials or reagents  This limited warranty is the sole and exclusive warranty  SBI does not  provide any other warranties of any kind  expressed or implied  including the merchantability or fitness of the Product  for a particular purpose     SBI is committed to providing our customers with high quality products  If you should have any questions or  concerns about any SBI products  please contact us at  888  266 5066        2013 System Biosciences  SBI      Page 10 ver  3 112113 www systembio com    
    
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