Appendix C – Analytical Methods and Information
Contents
1. Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 57 amp hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools Create Population Account Management gt Welcome admin Step 2 of 3 Confirm Name gt Logout Population Name Sullivan s Gulch Chinook User Name John S Doe TETARA Explanation John Doe s population Using the Analytical Tools Portion of this Web Site i gt Cancel Continue Figure 17 Confirm submitted data amp hatchery reform Home About Reviews Summary Conclusions Analytical Toots Reports Links Contact Us Analytical Tools Create Population Account Management gt Welcome admin Step 3 of 3 Success gt Logout You ve created population Sullivan s Gulch Chinook with Id 5006 Documentation Click here to return to the main population management page gt Using the Analytical Tools Portion of this Web Site Figure 18 Confirmation page View Population Modification History The View History table lists modification actions for all populations Users may view the table without logging in To access the View History Table click the link on the Population Management Tools main page Figure 15 A page similar to that shown in Figure 19 will load Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Gui2. 3 Click Upload 4 Use the same procedure to upload any of the four global datasets eo HRP Habitiat Pattern Upload tr lt http hatcheryreform us mfs tools admin habitat pattern upload form show action Ww v Gz l Googls Most Visited Getting Started Latest Headlines A hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools Habitat Pattern Dataset Upload Account Management Upload your Habitat Pattem dataset gt Welcome admin gt Logout CAUTION this uploaded dataset will completely replace the existing Habitat Pattern dataset in the system This update should only be made to replace information for an existing habitat pattern or to add a new habitat pattern data to be used with a hatchery population scenario Habitat Pattern Dataset in xml format Browse Upload Warning Clicking upload button will replace Habitat Pattern Data Home About Reviews Summary Tools Reports Links Contact Photos by Mary Edwards Photography Joseph Oregon 2008 Hatchery Reform Project Figure 12 Select global dataset to upload A confirmation page with a unique dataset ID will appear after a successful upload The dataset ID is referenced by the AHA scenarios to ensure scenarios are based on the current global datasets The significance of referencing a correct dataset ID is discussed in the following section Columbia River Hatchery Refo
3. gt Download Global Data Download just the latest global Habitat Pattern Harvest Pattern Hydro Pattern and Stray Matrix data for use in updating your AHA session with the latest information Administrative Tasks administrators only gt Upload Global Habitat Pattern Dataset Upload globa Habitat Pattern data Upload Global Harvest Pattern Dataset Upload global Harvest Pattern data Upload Global Hydro Pattern Dataset Upload global Hydro Pattern data Upload Global Stray Matrix Dataset Upload global Stray Matrix data Upload Hatchery Population Scenario Data Upload Hatchery Population Scenarios contained within a rol file Figure 2 Getting Started Wizard Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 43 Getting Started gt Step 1 of 3 Choose Species Select the species from the box on the left Figure 3 then click Continue to proceed to Step 2 of 3 ane Population Reports Download 4 lt ali im ej Cx A Ce _ http hatcheryreform us mfs tools aha rollup_download_select_species_action hatchery reform Summary Concdiusions Anabytical Tools Reports Links Cortact Us Analytical Tools AHA Account Management Getting Started Step 1 of 3 Choose Species Login Chinook MBI Continue Home About Reviews Summary Tools Reports Links Contact Photos by Mary Edwana Photagmphy Joseph Orgon 2008 Hatch
4. paea a J000 basii H recaia hai while hatcheries play a legitimate pole in reeling hate and Cre ees fice Pacis MATAA Ha d i ie Raha yen ware b reed of Cortana reece That OREO kua KO aaa Cabrel Trae Hunters Bppn Revie Grow HSR haa severed B maie ibe anc federal hanchery progres be Puget Gourd aed Coed Wasia and bn Pa Cobani Frair Gimn Por the HSR a Report fo Congress on Diiu Ha Biia Piy iem clink erg For Pa HARG Pd Babi i Ribbit can Giuni Aias Diiin Hiker Aiii cii pari AD otras pana Pur irae Hanohery Reio Prose eciecieag ther HSR iia gi wa nenom from Ba Pph Baung Dadia Waahingion Maries aw aai Bom Ba ipai pigi Gi Pir webaip Hore About Rasieeg Guerery Boots Reporte Linke Coni 7008 Marages For Roce Figure 9 Login link ADtounL Managerment Pte LO nes ocala mi auth legin_form_show action i Del Mac Screenshot kuzama wal in kanzi Aa hatchery reform Herren Abarat Pury irri Summary Concho Anahiticni Thats Report Hatchery Reform Lo gin Account Management Paza Bili Your birri A paian Loge Lemerre Mrama pasma p f Login Hama Aboud Riamisws Sarreneery Toots aparta Links Contaci 2008 Maresieg For Suess Figure 10 Enter username and password Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 50 Under the heading Administrative Tasks administrators only there are 5 links which may be used to upload files
5. Figure 5 Fully configured 6 pack Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 46 gt gt Step 3 of 3 Download Through a link on the Download page the user can access the configured AHA dataset 6 pack package Figure 6 The package contains the following e Scenarios specified on the Configure 6 pack page in a hatchery population file e Four global datasets e The AHA application e Supporting documentation Population Reports Download a http 127 0 0 1 8080 mfs tools aha rollup_download_offer_files action Ly v et ey Google Q Most Visited Getting Started Latest Headlines 2 YA hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools AHA Account Management Getting Started Step 3 of 3 Download Login You re now ready to download You ll find the download link below for everything you need to get started with a offline AHA session The zip file contains the AHA tool and all necessary datasets global data is contained in the global folder A user guide and additional documentation of the AHA analytical methods is contained in a doc folder If you already have the latest version of the AHA tool or the latest global datasets you will not need to extract them from the zip file However be sure to check that those files are the most recent versions available compare the datestamp in each filename
6. For Success Figure 1 Hatchery Reform Website Home Page Using the AHA v 13 Tools Tasks for All Users Links on the AHA Tools Page allow all users to download files required to begin a new AHA session or update global data for an existing AHA session For administrators the tools page provides links to upload the latest global datasets and AHA scenarios contained in a hatchery population file Getting Started Wizard The Getting Started link allows AHA users to download a complete file package in zip format Figure 2 The package contains current versions of the datasets listed in Table 1 the AHA application and the supporting documentation needed to start an AHA session The process is completed in 3 Steps Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 42 Tools AHA 00 lt gt 2 wA X ft E http hatcheryreform us mfs tools aha welcome_show action W v E Glz Google Most Visited Getting Started Latest Headlines A amp hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools AHA Account Management gt Login Wizards nomen Getting Started Begin an offline AHA session by configuring an AHA hatchery population dataset of 6 scenarios 6 Pack and then downloading that 6 Pack and all other resources necessary to run AHA including global data the AHA tool and the user guide
7. Pattern Data ty nyoro patterns 2009 02 18 nyd Download the latest global Stray Matrix dataset w stray matrix 2009 02 18 smx Once the global datasets are downloaded to your computer you can load them into your AHA session by opening the offline AHA tool and from the AHA application menu go to File gt Open to launch the file dialog screen The file dialog screen will ask you to locate each of the global datasets on your local system Complete instructions are provided in the Section 2 2 4 Running AHA A Quick Start Primer in 5 Easy Steps of the AHA user guide Figure 8 Select global data file to download Using the AHA Tools Tasks for Administrative Users This section outlines the procedure for uploading datasets to the central database These activities are for administrators only Administrators must have login credentials to use the upload tools gt ote that uploading any dataset will replace the existing dataset in the system Logging In Any website page gt Account Management gt Login On any of the website pages click on the Login button below the Accounts Management heading Figure 9 The Login page appears Enter your name and password in the provided boxes and click on Login Figure 10 Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 49 Welcome to Hatchery Reform Account Management Vicora Gi Fa vied cet ha Piit Niel Hasha Mai Proa Tha LIS ia ceed F Lai
8. selected the HSRG Sol scenario This scenario represents a specific scenario in the database Slot 4 The user has selected a working scenario based on the HSRG Hab Scenario Slot 5 The user has selected a working scenario based on the Current Scenario Slot 1 Slot 6 This is always the Historic scenario The user may not select another scenario After each slot is filled the user clicks the button marked Continue on the lower left of the panel to proceed to Step 3 of 3 v vY Population Reports Download GLB A a http hatcheryreform us mfs tools aha rollup download show configuration form action yy Cr Google Most Visited Getting Started Latest Headlines A YA hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools AHA Account Management Getting Started Step 2 of 3 Configure 6 Pack gt Login Select a scenario from the list or select a working scenario where alternatives can be developed and base it on an existing scenario This will build a dataset with the same information in more than one slot Configure Your AHA 6 Pack Current No Hat HSRG Sol Working 1 based on HSRG Hab fy Working 2 based on Current Historic Reset Continue Home About Reviews Summary Tools Reports Links Contact Photos by Mary Edwards Photography Joseph Oregon 2008 Hatchery Reform Project
9. the list or select a working scenario where alternatives can be developed and base it on an existing scenario This will build a dataset with the same information in more than one slot Configure Your AHA 6 Pack Current No Hat we HSRG Sol 4 Working 1 based on Please Choose 44 Working 2 4 Please Choose Historic z a Historic No Hat HSRG Sol Reset CHSRG Hab Current HSRG Hab_2 Home About Reviews Summary Tools Reports Links Contact Photos by Mary Edwards Photography Joseph Oregon 2008 Hatchery Reform Project Figure 4 Select four of six scenarios to download Selecting a generic scenario will produce a second column to the right of the first column From the dropdown menu the user is prompted to select the base scenario This base scenario defines the starting conditions for the user when working with the editable scenario Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 45 gt Note that all slots must be filled and that entries must be unigue Here is an example of producing a scenario 6 pack The user has made the following selections for the selectable slots shown in Figure 5 Slot 1 This is always the Current scenario The user may not select another scenario Slot 2 No Hat scenario was selected by user This scenario represents a specific scenario in the database Slot 3 The user has
10. their name in this field This information is necessary to identify to person posting the data as Hatchery Reform website login accounts may have several individual users e Explanation The user should enter a brief description of the new population in this field The description may contain up to 1024 characters Once the fields are complete click Continue Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 56 YA hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools Create Population Account Management gt Login Step 1 of 3 Population Name only admin tasks require login Population Name Sullivan s Gulch Chinook Documentation Change History Using the Analytical Tools All population related actions are tracked and recorded IN ADDITION to your action above please enter Portion of this Web Site information about yourself and your reason for this action Your Full Name John S Doe Explanation John Doe s population Cancel Continue required fields Figure 16 Step 1 of 3 enter required data In the second step the user is prompted to confirm that the submitted data are correct This is shown in Figure 17 If the information is correct click Continue and a page indicating success will load Figure 18 Note that a unique identifier is generated for the new population
11. to the remote database e Upload Global Habitat Pattern Dataset e Upload Global Harvest Pattern Dataset e Upload Global Hydro Pattern Dataset e Upload Stray Matrix Dataset e Upload Hatchery Scenario Data AHA Wizards Getting Started Begin a new AHA session by configuring an AHA 6 Pack and then downloading that 6 Pack and all other resources necessary for a new AHA session Download Global Data Download the latest global Habitat Pattern Harvest Pattern Hydro Pattern and Stray Matrix data for use in updating your current AHA session ators only Upload global Habitat Pattern data Upload Global Harvest Pattern Dataset Upload global Harvest Pattern data gt Upload Global Hydro Pattern Dataset Upload global Hydro Pattern data Upload Global Stray Matrix Dataset Upload global Stray Matrix data Upload Hatchery Scenario Data Upload Hatchery ar ortama within a rol file Figure 11 Administrative Tasks links The first four links allow the user to upload global datasets the last link allows the user to upload an AHA hatchery population file Note that uploading a global dataset will replace the current dataset in the central database Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 51 Upload Global Data To upload global datasets 1 Select type dataset to upload A page similar to Figure 12 will load 2 Browse to the location of global dataset
12. 2 Information management Information management consists of storing and retrieving information used in the analysis from the project web site ww hatcheryreform us and running analyses with the offline All H Analyzer AHA application The nezt two sections describe the online web site application and how to run the offline AHA application 2 1 Web Site User Guide This user s guide explains how to use the All H Analyzer AHA v 13 data management tools accessible from the Hatchery Reform website www hatcheryreform us The website tools allow hatchery managers agency personnel planners and members of the public to obtain the offline AHA application and datasets necessary to review and update an AHA analysis The AHA tool is used to evaluate management strategies for salmon and steelhead populations in the Pacific Northwest This guide does not address in detail use of the AHA tool That information may be found in Section 2 2 of this User s Guide 2 1 1 Background The AHA tool has been used by the HSRG to organize information and evaluate the effects of hatchery operations harvest mainstem passage survival hydropower and habitat conditions on populations of salmon and steelhead in the Columbia Basin as well as to develop recommendations to better achieve goals identified by managers The Columbia River Hatchery Reform System wide Report details the results of the HSRG review of all salmonid hatcheries and hatchery programs in
13. 23 renames the Sullivan s Gulch population from Chinook to Coho Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 59 YA hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools Account Management Population Management i Welcome admin Rename or Disable an Existing Population Logout ID Population Name 2 Asotin Summer Steelhead A run Disable Grande Ronde_Lookingglass Creek Spring Chinook Disable Documentation Grande Ronde_Catherine Creek Spring Chinook Disable Using the Analytical Tools Portion of this Web Site 7 Grande Ronde_Lostine Spring Chinook Disable Grande Ronde_Upper Grande RondeSpring Chinook Disable 8 Grande Ronde_Lower Grande Ronde Summer Steelhead Disable 8A Grande Ronde_Cottonwood Creek Summer Steelhead Wallowa Lyons Ferry Disable Hatchery 10 Grande Ronde_Wallowa Summer Steelhead Disable 9 Imnaha Spring Summer Chinook Disable 24 Imnaha Summer Steelhead Disable Snake Hells Canyon Fall Chinook Disable Figure 20 Step 1 rename population YA hatchery reform Home About Reviews Summary Conclusions Analytical Toots Reports Links Contact Us Analytical Tools Account Management Rename Population gt Welcome admin Step 1 of 3 Rename Population gt Logout Population Name Sullivan s Gulch Chinook Documentation Change History Using the Analy
14. 6
15. arvest data File Hydro Pattern Dataset File Global hydroelectric operation data The hatchery population dataset contains data from all Columbia basin populations and hatchery programs for the selected species The dataset contains a s1x scenario 6 pack The first scenario of the 6 pack is always the current condition and the sixth scenario is always the historic condition The user has options to load the open slots with scenario information available from the web Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 40 site Population Hatchery datasets are discussed further in the nezt section of this guide The global datasets contain data that describe the following e Stray Matrix Assumed stray rates of hatchery adult populations e Habitat Productivity capacity inputs e Harvest Harvest rates e Hydro Mainstem passage and ocean survival of juveniles and adults 2 1 6 Step by Step Guide to the Hatchery Reform Website Data Tools Note Users do not need to login to download Data Sets the AHA tool or supporting documentation Users must have login credentials to upload datasets to the central database Accessing the Tools Page Home gt Analytical Tools gt AHA v 13 On the Home page click the Analytical Tools tab then select AHA v 13 from the dropdown menu This will bring the user to the AN H Analyzer Tools Page which provides access to the central database to all
16. d additional data synchronization is required using the offline AHA tool To access the population tools select the Population Management link from the Analytical Tools tab Analytical Tools gt Population Management A page similar to that shown in Figure 15 will load Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 55 YA hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools Account Management Population Management gt Login Tools only admin tasks require login Create Population Create a population entry i Documentation View Population Modification History View the population modification history Using the Analytical Tools Rename or Disable an Existing Population Portion of this Web Site Rename or Disable an Existing Population Figure 15 Population Management main page Create Population To create a new population click the Create Population link from the Population Management main page The user will be prompted to login if they haven t already done so A page similar to that shown in Figure 16 will load The user is required to provide the following information e Population Name Enter the name of the new population The mythical salmon population Sullivan s Gulch Chinook is shown as an example in Figure 2 e User Name The user is required to enter
17. de Page 58 amp hatchery reform Summary Conclusions Analytical Tools Analytical Tools View History Click here to return to the main population management page Date Type Account ID Name Full Name Explanation Jul 7 2009 1 35 21 AD Chinook Figure 19 Population Modification History page The table has seven columns Reports Account Management Welcome admin gt Logout Documentation gt Using the Analytical Tools Portion of this Web Site e Date The date and time the modification was made e Type The type of modification Possible values are CREATE RENAME and DISABLE e Account The login account used to access the Hatchery Reform website tools e ID The unique identifier assigned to the modification event e Name The population name e Full Name The person responsible for the modification e Explanation Explanatory notes Modify an Existing Population To view enabled populations in the Hatchery Reform database click on the Rename or Disable an Existing Population link found on the Population Management main page Figure 15 A page similar to that shown in Figure 20 will load Users with login credentials are permitted to edit the population name or disable the population entirely To rename an existing population click on the Rename link in the Action column next to the population to be modified The example shown in Figures 21 through
18. ery Reform Project Figure 3 Select species Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 44 gt Step 20f3 Configure 6 pack The six scenarios contained in a hatchery population file are referred to as a 6 pack Four scenarios are selected by the user from dropdown menus associated with slots 2 through 5 As mentioned previously slot 1 is always the current condition and slot 6 1s always the historic condition The choices associated with slots 2 through 5 are either specifically or generically named scenarios Figure 4 Scenarios with an assigned name e g HSRG Sol indicate a scenario with specific assumptions representing an analytical solution The user may also download a working scenario with inputs for one of the scenarios e g multiple copies of the current scenario A user can edit inputs for any scenario in a dataset however most users may want to retain the information for a particular scenario and create a new scenario to evaluate different strategies gee Population Reports Download cn tr BN http hatcheryreform us mfs tools aha rollup_download_show_configuration_form action Most Visited Getting Started Latest Headlines A YA hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools AHA Account Management Getting Started Step 2 of 3 Configure 6 Pack Login Select a scenario from
19. ery operations AHA estimates reflect a measure of hatchery influence on natural populations that is a function of both the percent hatchery origin spawners in the natural escapement and the percent of natural origin broodstock incorporated into the hatchery program Appendix C System wide Report The purpose of the AHA tool is to allow managers to explore the implications of alternative ways of balancing hatcheries harvest habitat and hydrosystem constraints This tool is not used to make decisions nor 1s it used to judge the correctness of management policies Rather it illustrates the implications of alternative ways of balancing the four Hs so that informed decisions can be made AHA should not be viewed as a new tool to predict habitat harvest or hydroelectric system effects on salmonid populations it really is a platform for integration of existing analyses It is a relatively simple aid to regional decision making which can rapidly explore the potential impacts of a variety of detailed scenarios relating to one or more Hs 2 1 5 Data Sets The AHA tool uses the file types shown in Table 6 Table 6 AHA application file types File Type Contents Hatchery Population Data rol text Data for multiple scenarios for a hatchery program natural population Stray Matrix File Global data that describes stray rates of hatchery adults Habitat Pattern Dataset File Global habitat data Harvest Pattern Dataset Global h
20. in the file 5 Re save the hatchery population dataset to be uploaded Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 54 6 Upload the hatchery population file following steps 1 5 Upload Hatchery Scenario Data Method 2 Ifthe scenarios are based on global datasets newer than those currently in the central database the user should first update the global datasets in the central database and synchronize the scenario file following the procedure outlined below 1 Upload the new global datasets used in the AHA session 2 Download those same global datasets from the website A new pattern ID will be generated indicating the global datasets originated from the central database 3 Load the downloaded global datasets into the user s current AHA session 4 Resave the hatchery population dataset to be uploaded 5 Follow steps 1 5 Upload Hatchery Scenario Data Population Management Tools This section discusses the population management tools accessible from the Hatchery Reform website All users are able to view population data Users with login credentials are permitted to add and modify populations The population management tools allow users to add new populations view and edit existing populations and disable but not delete populations In addition users may view a population modification history table Users should be aware that once a population is added or modifie
21. le Ifthe Disable links are grayed out additional steps are required as population cannot be disabled until all datasets that reference it are first edited To delete references to the population the user must edit each file that references that population using the offline AHA tool These files will include one or more of the pattern datasets as well as a population hatchery data file formerly called a rollup file Once the population references are deleted the files must be uploaded using the HRP website upload tools After a successful upload the disable link become active and the population can then be disabled Note that disabling a population removes it from the table on the main page but does not delete it from the underlying data tables Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 61 3 References Budy P and H Schaller 2007 Evaluating tributary restoration potential for pacific salmon recovery Ecological Applications 17 4 1068 1086 NMES National Marine Fisheries Service 2008 Endangered Species Act Section 7 Consultation Biological Opinion and Magnuson Stevens Fishery Conservation and Management Act Consultation on remand for operation of the Federal Columbia River Power System and 19 Bureau of Reclamation Projects in the Columbia Basin NMFS Portland Oregon Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 10
22. on your local system to the datestamps in the filenames contained in the zip file Download your configured AHA 6 Pack Package wy aha 6 pack Chinook 2009 02 19 1144 zip Figure 6 Click link to download zip file Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 47 Download Global Data Wizard Tools gt Download Global Datasets gt choose data sets Choosing this link allows the user to download the current global data sets Downloading the current global datasets allows the user to update an existing AHA session From the main Tools page select Download Global Datasets Figure 7 The new page will have links for Stray Matrix Habitat Patterns Harvest Patterns and Hydro Patterns Figure 8 Click on any of the links to download the current global data set to your hard drive gt ote that the filenames are date stamped allowing the user to determine if global datasets used in their AHA session are outdated 000 Tools AHA lt D x a x http 127 0 0 1 8080 mfs tools aha welcome_show action Most Visited Getting Started Latest Headlines A 8 hatchery reform Home About Reviews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools AHA Account Management gt Login Wizards ogin Getting Started Begin a new AHA session by configuring an AHA 6 Pack and then downloading that 6 Pack and all other resources necessary for a ne
23. or error_show action Most Visited Getting Started Latest Headlines 2 YA hatchery reform Hatchery Reform Error An Error Occurred Error parsing Rollup File Your Dataset references a global Stray Matrix Dataset with an ID of 111217 This Dataset does not currently exist in the system Please ensure the referenced global Dataset is present and then retry your upload Figure 14 Error message caused by unsynchronized global dataset IDs Synchronizing Global Dataset IDs As mentioned previously an upload error is generated if pattern dataset IDs in the hatchery population file do not match the respective IDs in each of the current global datasets The user must synchronize the pattern IDs in the hatchery population file with the current pattern datasets using one of the two methods outlined below Method 1 Ifthe scenarios are intended to be based on the global datasets currently in the central database the user should update the local global datasets on their computer and synchronize the hatchery population file following this procedure 1 Download the current global datasets from the hatchery reform website 2 Open a new offline AHA session Load the downloaded datasets into the AHA tool This procedure is discussed in detail in the AHA User s Manual Section 2 2 4 Appendix D of the System Wide Report 4 Reload the hatchery population file into AHA The AHA tool will automatically update the patterns IDs
24. ow the user to download AHA datasets Figure 1 Credentialed users administrators may download and upload datasets Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 41 Welcome Wy LIG Mac Screenshot 8 hatchery reform Home About Reviews Summary Conclusions Analytical Tools Links Contact Us orn wT Hatchery Reform Welcome to Hatchery Reform Account Management Welcome to the website for the Pacific Northwest Hatchery Reform Project The US Congress established the Login project in 2000 because it recognized that while hatcheries play a legitimate role in meeting harvest and conservation goals for Pacific Northwest salmon and steelhead the hatchery system was in need of comprehensive reform The project s independent scientific review panel the Hatchery Scientific Review Group HSRG has reviewed all state tribal and federal hatchery programs in Puget Sound and Coastal Washington and in the Columbia River Basin For the HSRG s Report to Congress on Columbia River Basin Hatchery Reform click here For the HSRG s full System Wide Report on Columbia River Basin Hatchery Reform click here All other products from the Hatchery Reform Project including the HSRG s principles tools and recommendations from the Puget Sound Coasta l Washington Review are available from the Reports page of this website Home About Reviews Summary Tools Reports Links Contact 08 Managing
25. rm Project Final Systemwide Report Appendix D User Guide Page 52 Upload Hatchery Population Scenario Data To upload hatchery population scenario data l NEPA 4B NEPA 5B Cur wy Hab No Hat HSRG Sol HSRG Hab CoManage No Hat w Hab NEPA 1A From the Analytical Tools page click the Upload Hatchery Scenario link Browse to the scenario 6 pack file Click Upload If the global dataset IDs in the hatchery population file match those of the global datasets the user is then prompted to specify which scenarios in the dataset to upload Figure 13 Note If the global dataset IDs in the hatchery population file do not match the current global dataset IDs an error message similar to that shown in Figure 14 will be displayed Synchronization of dataset IDs is discussed in the next section After selecting scenarios to upload click Upload A confirmation page will appear indicating a successful upload None None None 2009 02 17 10 51 00 2009 02 17 14 56 54 2009 02 17 10 30 56 None None Figure 13 Select scenarios to upload Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Replace Existing Scenario L Replace Existing Scenario Ey lqnore do not upload gnore do not upload Replace Existing Scenario Page 53 0O HRP Error Page lt v on x A af http hatcheryreform us mfs err
26. the U S portion of the Columbia River Basin It contains a description of principles and recommendations advocated by the HSRG and a discussion of how to analyze a hatchery program to determine the best solution for achieving conservation and harvest goals This Hatchery Reform Project website is one of the recommendations that grew out of the HSRG review 2 1 2 Who may use the hatchery reform website Portions of the hatchery reform website including population data files global datasets the AHA tool and supporting documentation are available to all users Uploading new population datasets and global datasets is restricted to users with administrative privileges 2 1 3 How to get help with the website Users may obtain help with the site by contacting the Hatchery Reform webmaster 2 1 4 The AHA Tool The All H Analyzer tool AHA v 13 is a stand alone Microsoft Excel based desktop application which can be downloaded for free on this website The Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 39 All H Analyzer refers to the four Hs which comprise the main influences on salmonid populations in the Columbia River Basin habitat harvest hatcheries and passage through hydroelectric dams The tool contains calculations and summary graphics of salmon fisheries characteristics based on e Habitat patterns e Harvest patterns e Hydroelectric dam operation patterns e Hatch
27. tical Tools All population related actions are tracked and recorded IN ADDITION to your action above please enter Portion of this Web Site information about yourself and your reason for this action Your Full Name John S Doe Explanation Coho not Chinook Cancel Continue required fields Figure 21 Step 1 rename population Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 60 YA hatchery reform About Reviews Analytical Tools Rename Population Step 2 of 3 Confirm Rename Population Name Sullivan s Gulch Chinook User Name John S Doe Explanation Coho not Chinook Cancel Continue Figure 22 Step 2 confirm edits YA hatchery reform Home About Reviews Analytical Tools Rename Population Step 3 of 3 Population Update Successful Click here to return to the main population management page Figure 23 Step 3 confirmation page Summary Conclusions Analytical Toots Reports Links Contact Us Account Management Welcome admin Logout Documentation Using the Analytical Tools Portion of this Web Site Summary Conclusions Analytical Toots Links Contact Us Account Management Welcome admin Logout Documentation Using the Analytical Tools Portion of this Web Site To disable a population click the Disable link next to the population name in the main page tab
28. w AHA session Download Global Data Download the latest global Habitat Pattern Harvest Pattern Hydro Pattern and Stray Matrix data for use in updating your current AHA session Administrative Tasks administrators only Upload Global Habitat Pattern Dataset Upload global Habitat Pattern data Upload Global Harvest Pattern Dataset Upload global Harvest Pattern data Upload Global Hydro Pattern Dataset Upload global Hydro Pattern data Upload Global Stray Matrix Dataset Upload global Stray Matrix data Figure 7 Global Data Download Wizard Columbia River Hatchery Reform Project Final Systemwide Report Appendix D User Guide Page 48 0 AHA GLobal Data Download lt m e x GA http 127 0 0 1 8080 mfs tools aha update global data show action wy SG Most Visited gt Getting Started Latest Headlines A YA hatchery reform Home About Revlews Summary Conclusions Analytical Tools Reports Links Contact Us Analytical Tools AHA Global Data Download Account Management Download each of the global datasets below to your local system Load each of those datasets into your AHA Login Roll Up session using the AHA Roll Up Tool Download the latest global Habitat Pattern Data wy habitat patterns 2009 02 19 hab Download the latest global Harvest Pattern Data 4 harvest patterns 2009 02 18 hrv Dowload the latest global Hydro
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