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1. CNPq Conselho Nacional de Desenvolvimento Cient fico e Tecnol gico National Council for Scientific and Technological Development CNS Conselho Nacional de Sa de National Health Council Brazil CSS Cascading Style Sheet IV Markup and Parser Table of contents DeCS Health Sciences Descriptors DTD Document Type Definition FAPESP Funda o de Amparo Pesquisa do Estado de S o Paulo The State of S o Paulo Research Foundation FAQ Frequently Asked Questions HTML HyperText Markup Language HTTP HyperText Transfer Protocol m ISBN International Standard Book Number ISI Institute for Scientific Information ISO International Organization for Standardization m ISSN International Standard Serial Number LILACS Latin American and Caribbean Health Sciences Literature MEDLINE Medical Literature Analysis and Retrieval System Online NLM National Library of Medicine m PAHO Pan American Health Organization PDF Portable Document Format SciELO Scientific Electronic Library Online m SeCS Serials in Health Sciences SGML Standard Generalized Markup Language URL Universal Resource Locator Markup and Parser Table of contents WHO World Health Organization XML eXtensible Markup Language VI How to use this manual This manual aims to helping users of markup and parser two of the SciELO methodology programs This manual is structured i
2. Journal title Title of article Name of file Initial Final hour Realtime Notes hour Order Pages Language Type Section Ref Order Pages Language Type Section Ref Order Pages Language Type Section Ref Order Pages Language Type Section Ref The spreadsheet should be filled out before initiating markup in order to get the data needed to complete the initial screen of the markup program Thus it is not necessary to consult the printed journal to begin markup of an article e Order order of the document that is being marked according to the journal summary e Pages initial and final pages of the article that is being marked e Language language of the text e Type if the document has tables graphs etc e Section code of the section in which the document is marked The section should have been previously registered in the Title Manager and selected for the issue e Ref total references of the article 68 Appendix J Automatic Marking Automata Concepts According to Wikipedia an automaton works as a mechanism that recognizes a certain language and is used to model a machine or a computer A fundamental concept to understand automata is the concept of state which applies to any system such as a television set for example A television set may be on or off which means there are two possible states for the system As the entry string characte
3. ocontrib oiserial stitle Am J Med stitle date dateiso 19890000 1989 date volid 86 volid pages1668 72 pages oiserial ocitat ocitat no 2 no ocontrib title language en Criteria for use of amphotericina B lipid complex injection in adults and children title ocontrib oiserial stitle Am J Health Sys Pharm stitle date dateiso 19960000 1996 date volid 53 volid issueno 15 issueno pages 2751 2 pages oiserial ocitat ocitat no 3 no ocontrib oauthor role nd surname Tollemar surname fname J fnamel oauthor oauthor role nd surname Ringden surname fname O fname oauthor title language en Lipid formulations of amphotericin B title subtitle Less toxicity but at what economic cost subtitle ocontrib oiserial stitle Drug Safety stitle date dateiso 19950000 1995 date volid 13 volid issueno 4 issueno pages 207 18 pages oiserial ocitat ocitat no 4 no ocontrib oauthor role nd surname Sugar surname fname AM fname oauthor title language en Empiric treatment of fungal infections in the neutropenic host title subtitle Review of the literature and guidelines for use subtitle ocontrib oiserial stitle Arch Intern Med stitle date dateiso 19900000 1990 date volid 150 volidI issueno 11 issueno pages 2258 64 pages oiserial ocitat ocitat no 5 no ocontrib loauthor role nd
4. Moojen surnane author Fiel wring the SGML Declara surname JRevarzolo surnane auth lBolsista PIBIC CHPq graduanda de FE AS CIELO BINASGMLPARS sat dci BEJ att id a02 orgnane UFRGS orgd edicina Veterin ria Faculdade de Veterin ria de UFRGS a Fie the DID aff id s03 orgname UFRGS org JC SCIELOVBIN SGMLPARS Vew3_1 did s j Veterin ria da UFRGS Caixa Postal 15005 zipcode 91501 9701 zipcode ci Document Type Name ea DE bibcom hist Recebido para public ecebido pare publica o ap s nod Y Add jorne Madusp To Document de abril de 2001 received hist Cancel hutor para correspond ncia F Add SGML Declaration To Document mail snapridna chiot ufrgs br ecursos financeiros report rsponsot orqneme CNPq orgnane csponsor bolsas rsponsor forqnemejFAFEPGS orgnane J processo contract 96 0322 4 contract rsponsor raponsor JPRONEX em irologia Veterin ria orgnane FINEP oroname contract 215 96 contract rsponsor report E SUBD abstract lenguege pt 0 objetivo deste trabalho foi analisar amostras de soro e de c lulas sanguineas de caprinos para detec o de anticorpos e DNA proviral do virus da artrite encefalite caprina CAEV respectivamente Utilizou se a t cnica de imunodifus o em gar ACID e a rea o em cadeia da polimerese PCR xj sal AGH ERMRO fis Ee e ue yue yea yue Tse Oe am To activate Parser just select Parse Documen
5. fname M fname oauthor oauthor role nd surname Dar surname fname M fname oauthor title language en Evidence for person to person transmission and efficacy of low dose immune serum globulin from na Indian source to prevent it title ocontrib oiserial sertitle Indian J ournal of Gastroenterology sertitle volid 11 volid pages 113 pages date dateiso 19920000 1992 date oiserial ocitat Monograph chapter NAKANO O SILVEIRA NETO S ZUCCHI R A Avaliacao de danos and identifica o pr tica das pragas pragas doalgodoeiro In Entomologia econ mica Piracicaba Esalg 1981 p 45 86 ocitat ocontrib oauthor role nd surname NAKANO surname fname O fname oauthor oauthor role nd sumame SILVEIRA NETO surname fname S fname oauthor oauthor role nd surname ZUCCHI surname fname R A fnamel oauthor title language pt Avaliac o de danos and identifica o pr tica das pragas title subtitlelpragas do algodoeiro subtitle ocontrib omonog In oauthor role nd previous previous oauthor title language pt Entomologia econ mica title city Piracicabal city pubname Esalq pubname date dateiso 19810000 1981 date p pages 45 86 pages omonog ocitat Complete monograph PRITCHARD A AND BAKER AND W A revision of the spider mite family Tetranychidae San Francisco Pacific Coast Entomological Socie
6. ncidod EID eid htm url viserial vcitat Paper in annals Kimura Shibasaki H editors Recent advances in clinical neurophysiology Proceedings of the 10th International Congress of EMG and Clinical Neurophysiology 1995 Oct 15 19 Kyoto J apan Amsterdam Elsevier 1996 vcitat vcontrib author role ed surname Kimura surname fname J fname author author role ed surname Shibasaki surname fname H fname author editors vtitle title language en Recent advances in clinical neurophysiology title vtitlel vcontrib vmonog vtitle title language en Proceedings title vtitlelof confgrp the no 10 no th confname International Congress of EMG and Clinical Neurophysiology confname date dateiso 199510 15 1995 Oct 15 19 date city Kyotol city country J apan country confgrp city Amsterdam city pubname Elsevier pubname date dateiso 19960000 1996 date vmonog vcitat Monograph chapter Phillips SJ Whisnant J P Hypertension and stroke In Laragh J H Brenner BM editors Hypertension pathophysiology diagnosis and management 2nd ed New York Raven Press 1995 P 465 78 vcitat vcontrib author role nd surname Phillips surname fname S fname author author role nd surname Whisnant surname fname P fname author vtitle title language en Hypertension 49 Markup and Parser Appendix F Examples of references marked according t
7. xmonog serie Part matter xcontrib xmonog serie In this model x is represented by the first letter of the standard used to mark the references Hence markup will automatically add the initial of the standard to the respective tag when marking the references using a certain standard Examples 1 VANCOUVER Standard Journal articles Part analytical matter vcontrib viserial 2 ISO 690 87 Standard Journal articles Part analytical matter icontrib iiserial 3 ABNT 6023 89 Standard Journal articles Part analytical matter acontrib aiserial 4 OTHER Standards Journal articles Part analytical matter ocontrib oiserial 47 Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards 1 Bibliographic references according to Vancouver standard vcitat Examples Article in a scientific journal Browell DA Lennard TW Immunologic status of the cancer patient and the effects of blood transfusion on antitumor responses Curr Opin Gen Surg 1993 325 33 vcitat vcontrib author role nd surname Browell surname fname DA fnamel author author role nd surname Lennard surname fname TWT fname author vtitle title language en Immunologic status of the cancer patient and the effects of blood transfusion on antitumor responses title vtitle vcontrib viserial vstitle stitle Curr Opin Gen Surg stitle vstitle date dateiso
8. 19930000 1993 date pages 325 33 pages viserial vcitat 48 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards Enzensberger W Fischer PA Metronome in Parkinson s disease letter Lancet 1996 347 1337 vcitat vcontrib author role nd surname Enzensberger surname fnameJW fname author author role nd surname Fischer sumamel fname PA fname author vtitle title language en Metronome in Parkinson s disease title tp letter tp vtitle vcontrib viserial vstitle stitle Lancet stitle vstitle date dateiso 19960000 1996 date volid 347 volid pages 13371 pages viserial vcitat Morse SS Factors in the emergence of infectious diseases Emerg Infect Dis serial online 1995 J an Mar cited 1996 J un 5 1 1 24 screens Available from URL http www cdc gov ncidod EID eid htm vcitat vcontrib author role nd surname Morse surname fname SS fname author vtitle title language en Factors in the emergence of infectious diseases title vtitle vcontrib viserial vstitle stitle Emerg Infect Dis stitle tp serial online tp J vstitle date dateiso 19950100 1995 J an Mar date cited cited dateiso 19960605 1996 Jun 5 cited volid 1 volid issueno 1 issueno location 24 screens location Available from URL url http www cdc gov
9. It identifies the beginning of a bibliographic reference in a bibliography e OTHER It assembles the elements of a bibliography structured according to the standards that were not adopted by FAPESP BIREME project It contains Ocitat It identifies the beginning of a bibliographic reference in a bibliography 16 Markup and Parser The bibliographic references are individually marked upon choice of the standard used in the article and indication of total references to be marked In order to identify each element of the reference it is necessary to be in the correct level of the hierarchic structure 3 2 2 4 Floating elements On the top right corner of the screen there is a tool bar with the buttons to identify the floating elements of the text that is the elements that may be marked in any structure level aff affiliation Identifies the institution the author is affiliated to It contains the attributes identifier id organization orgname organization division 1 orgdiv1 organization division 2 orgdiv2 and organization division 3 orgdiv3 used to identify the divisions of an organization based on the largest division It also contains the elements city city state state country country zipcode zipcode and e mail email ign ignore It indicates the elements of the text that have no bibliographic value This element is automatically inserted by the program SGML Parser The following elements are not
10. Parser Appendix B Article marked according to DTD Scielo 3 1 3 affid a03 orgname Hospital Cl nico de San Carlos orgdiv1 Servicio de Farmacia Servicio de Farmacia Hospital Cl nico de San Carlos city Madrid city aff Correspondencia Concepci n Prieto Yerro Servicio de Farmacolog a Cl nica Hospital Cl nico de San Carlos C Profesor Mart n Lagos s n 28040 Madrid Correo electr nico conchapy hotmail com RESUMEN bibcom abstract language es FUNDAMENTO La anfotericina B es el tratamiento de elecci n de las infecciones f ngicas sist micas pero su utilidad cl nica est limitada por su toxicidad Las formulaciones lip dicas parecen igualmente eficaces y m s seguras pero tienen un mayor coste El incremento del consumo y del gasto de estas formulaciones nos llevo a plantear un estudio para conocer su perfil de utilizaci n cuantitativo y cualitativo y evaluar la repercusi n econ mica de su uso inapropiado METODOS Se desarrollaron unas normas de uso de la anfotericina B y se evalu de forma retrospectiva la calidad de la prescripci n de la anfotericina B no convencional anfotericina B noC y la repercusi n econ mica de su uso incorrecto RESULTADOS En el 54 de los tratamientos se hizo una mala selecci n de anfotericina B en el 3 5 no estaba indicada la utilizaci n de anfotericina B El exceso de gasto derivado de la prescripci n incorrecta fue de 42 millones de pesetas un 35 del gasto to
11. T ign 2 f3 T ign f1 f38 T ign It is also necessary to indicate what should be ignored by the program spaces and characters In this example the automaton will ignore blank spaces in the journal s title sertitle sertitle s1 s2 s1 s1 T ign s1 s2 T ign The same procedure is adopted for the other types of bibliographic references How to use To begin the automatic marking it is necessary to select the bibliographic reference that will be marked and click on the marking icon 73 Markup and Parser Appendix J Automatic Marking Automata W Microsoft Word a04 20n2 SE 2H Moraes Mto ML Comparato E D S E Monteiro Orgs A crian a na contemporaneidade ea psican lise Vol I Familia e sociedade Di logos interdisciplinares pp 17 25 S o Paulo Casa do Psic logo Neumann E 1980 A crian a Estrutura e din mica da personalidade em esde o in cio de sue for s o Paulo Cultrix Resende umana do homem ra ns o Universit ria vr ES Resende YR 2001 Avalia o da intera o parental no desenvolvimento emocional o Resumo Em UEL org J Anais do Congresso iberoamericano de Psicolog a Clinica e E octat t Page 33 Sec 1 33 37 At 2cm In Col 1 REC TRK Ext OVR wen EX Asa 4 2 A OB Ea eed exe el xsl xe RS EST The screen will then show the option s to identify the reference It is up to the pers
12. and use the Parser c Save on TXT format and use the Parser after c es aquosas em tria subtitle titlegrp ftitle langu ze lita NaX O Ex without to save on TXT Format title language en Co zeolite titie s s solution on NaX rp tall w5 26 tat Ss DEVE I a E E A E y STi eer article piiend doctopic os languagespt ccodesbri 1 status 1 version 3 1 typestab order 01 seccodesnd sponsar nd stitle Arg Bras Med Vet Zootec volid 53 issuenos6 dateiso 20011200 fpage 635 ipege 640 asen 0102 0935 front ctatlegrp titie language prjbetec o de infec o pelo virus da artrite encefalite caprina imunoditus o em gar e rea o en cade a de polimerase com primers degenerados title 5 F091 title lenguageren Derection of caprine actthritis encepbalitis virus infection egar gel immunodiffusion and polymerase chain reaction with degenerated primers titieje80933 titiegrp euthgrp author role nd fnano J K fnane surname Putkoski surmane authorji author role nd rid a02 Creme R tname surname Verenice suenane author 2 author cole nd name JD fneme surnane Reiechek eurname suthor 5 author toleend tnameJA C ftnane surnane JVendelsteini surneme euthor author role nd tnamej fnane surnane Moojen surnaas authorJ3 author role nd fnamejA P fname surnane Ravarrolo surnane j author authgrp 3 1Bolsista PIBIC CMPg gre
13. automa o title acontrib Rio de J aneiro 1969 confgrp Trab Apres Ao no II no confname Congresso regional sobre Documenta o confnameland no IX no confname Reuni o da FID CLA confnamel date dateiso 19691128 28 a 29 nov 1969 date city Rio de J aneiro city confgrp acitat 4 Bibliographic references not using any of the previous standards OTHER ocitat Examples J ournal article NICKEL J L Temperature and humidity relationships of Tetranychus desertorum banks with special reference to distribution Hilgardia Berkeley v 30 n 2 p 41 100 1960 ocitat ocontrib oauthor role nd surname NICKEL surname fname L fname oauthor title language en Temperature and humidity relationships of Tetranychus desertorum banks with special reference to distribution title ocontrib oiserial sertitle Hilgardial sertitle city Berkeley city v volid 30 volid n issueno 2 issueno p pages 41 100 pages date dateiso 19600000 1960 date oiserial ocitat 18 Khuroo M Dar M Evidence for person to person transmission and efficacy of low dose immune serum globulin from na Indian source to prevent it Indian J ournal of Gastroenterology 11 113 1992 53 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards ocitat no 18 no ocontrib oauthor role nd surname Khuroo surname
14. casas acasos A a S S OG OD ads ances E a 35 Markup and Parser Table of contents General structure for article and COX as a O A A 35 General structure of articles in electronic jOUrNAIS ccce 36 Appendix B Article marked according to DTD Scielo 3 1 ccccsccceeecsceeeenseeeeeseeeenueees 37 Appendix C Text marked according to DTD SciELO 3 1 ccccccccceeensceeeesseeeeesseeeenaaees 41 Appendix D Types of DOCU ooo o a 43 Appendix E Guide to identify bibliographic references and their elements in Program Markup cierran ia AA A AA 46 Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER Standards ocioso a a da 48 Appendix G Examples of markup in affiliation aff ccccccseeeecsceeeeeseeeeeeeeeeenaueees 60 Appendix H What should be checked after marking an article ccccceseeeeeeseeeeeeseeeene 64 Appendix Spreadsheet for individual markup COntrol cccccscceeessceeeecseeeeeseeeeenaaeees 67 Appendix J Automatic Marking Automata sssssssssnnnsnnnnnnnsnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 69 III Abbreviations used AACR2 Anglo American Cataloguing Rules 2nd Edition ABNT Associac o Brasileira de Normas T cnicas Brazilian Association of Technical Standards ASCII American Standard Code for Information Interchange BIREME Latin American and Caribbean Center on Health Sciences Information BVS Biblioteca Virtual em Sa de see VHL CGI Common Gateway Interface
15. corresponding to different operating conditions for the system It 1s shown that closed loop stability is guaranteed by the feasibility of a linear matrix optimization problem iQjw ja front body back si Sel ta MOS mn as e a E pa ea Tf Asaj ADM ERRO gt 2rd E n E moda gy mico Ewo ay mico JORA 1233PM The first DTD hierarchical level may be seen in the bottom of the screen All the other bars with DTD elements are available in the same area and the buttons with arrows are used to go up and down in the hierarchy When the mouse arrowis placed on the button a wndow pop up is displayed describingthe function of each button in English Markup is performed by selecting the text with the mouse The first hierarchical level is represented by front body and back 14 Markup and Parser Markup 3 2 2 1 Front It identifies the beginning of the article where descriptive and or bibliographic information to identify the article is found such as e Titlegrp it assembles the title elements of a document It contains Title identifies the title Subtitle identifies the subtitle e Authgrp assembles the elements used to identify the individual or corporate authors of the article It contains Author it assembles the elements used to identify the individual authors who are responsible for the intellectual content of a document such as name surname and type of responsibility coordination organizat
16. document processed o Type check if there are illustrations in the document such as figures tables graphs etc Always take into account the illustration and not its legend that is in case it is written figure in the legend of a graph consider it a graph and not a figure e Titlegrp tag Example titlegrp title language en Tuberculosis related middle ear otitis tte subtiticla rare occurrence subtitle titlegrp 2 Check if the title was marked in the correct language In case of subtitle check if it was marked correctly In case of the full stop check if it was kept out of markup e Authgrp tag Example authgrp author role nd rid a01 fname Wellington da Silval fname surname Mendes surname author author role nd rid a01 fhame Antonio Augusto Moura dal fname sumame Silval surnamel author author role nd rid a01 fhame os de Ribamar fname surname Trov o surname author author role nd rid a01 fhame Ant nio Rafael dal fname surname Silva surnamel author and author role nd rid a01 fhame J ackson Mauricio Lopes fname surname Costal surnamel author authgrp Author tag check if the names and surnames of all authors were appropriately marked Affiliation tag check if all authors had their respective institutions marked e Abstract tag Example bibcom Resumo abstract language pt A ac o ovicida dos inseticidas tem sido
17. e Financing Mark as report only the responsible for financing the research reported in the article e Author identification In case of doubt in identification of the surname of authors of the article or in bibliographic references see AACR2 Examples of references marked using OCITAT J ournal article Bernardino ALF et al 2000 Molecular analysis in Brazilian cystic fibrosis patients reveals five novel mutations Genetic testing 4 69 74 ocitat ocontrib oauthor role nd surname Bermardino surname fname ALF fname oauthor et al et al et al date dateiso 20000000 2000 date title language en Molecular analysis in Brazilian cystic fibrosis patients reveals five novel mutations title ocontrib oiserial sertitle Genetic testing sertitle volid 4 volid pages 69 74 pages oiserial ocitat Bonnemann et al 1995 b sarcoglycan A3b mutations cause autosomal recessive muscular dystrophy with loss of the sarcoglycan complex Nature Genet 11 266 273 ocitat ocontrib oauthor role nd surname Bonnemann surname oauthor et al et al et al date dateiso 19950000 1995 date title language en b sarcoglycan A3b mutations cause autosomal recessive muscular dystrophy with loss of the sarcoglycan complex title ocontrib oiserial sertitle Nature Genet sertitle volid 11 volid pages 266 273 pages oiserial ocitat Complete monograph Araujo Ricardo de Benzaque
18. of the article can be found It contains bbibcom VANCOUV ISO690 ABNT6023 OTHER e Bbibcom it assembles the complementary elements to identify the article such as abstract and keywords etc It contains Abstract it identifies the abstract of the article Keygrp It assembles the elements for the thematic description of a document Confgrp it assembles the elements to identify an event such as conference seminar congress etc contained in annals and similar publications Report it gathers information about the project of which the article is a partial or final product Thesgrp it gathers the elements needed to identify a thesis or dissertation or the elements derived from a thesis or dissertation Hist it identifies the history of publishing an article in a journal comprising dates it was received accepted or revised Title it identifies the title Subtitle it identifies the subtitle e VANCOUV It assembles the elements of a bibliography structured in compliance with Vancouver standard It contains Vcitat It identifies the beginning of a bibliographic reference in a bibliography e S0690 It assembles the elements of a bibliography structured in compliance with ISO 690 87 standard It contains Icitiat It identifies the beginning of a bibliographic reference in a bibliography e ABNT6023 It assembles the elements of a bibliography structured according to NBR 6023 89 standard by ABNT It contains Acitat
19. pouco considerada nas atividades de controle dos transmissores da endemia chagasica No sentido de comparar o potencial ovicida de tr s piretr ides sint ticos lambdacialotrina alphacipermetrina and deltametrina utilizados no combate aos triatom neos os autores realizaram provas em laborat rio cujos resultados nas condi es adotadas foram favor veis a lambdacialotrina As 65 Markup and Parser Appendix H What should be checked after marking an article esp cies testadas foram Panstrongylus megistus and Triatoma sordida sendo esta ultima mais suscet vel aos piretr ides testados abstract 2 Check if the abstract languages were correctly marked Check if the word Abstract was kept out of markup 2 Check if the full stop was included in markup e Keygrp tag Example Keywords keygrp scheme nd keyword type m language pt Inseticida keyword keyword type m language pt Piretr ides keyword keyword type m language pt Triatom neos keyword keyword type m language pt Controle keyword keyword type m language pt Acao ovicida keyword keygrp Check if the language of keywords was correctly marked o In case of subkey check if they were appropriately marked Check if the term keyword was kept out of markup 66 Appendix Spreadsheet for individual markup control 67 Markup and Parser Appendix Spreadsheet for individual markup control Responsible for markup
20. with all their attributes automatically inserted in the beginning of the document ELKI fpage 11 Ipage 24 issn 0104 6632 ROBUST MPC FOR STABLE LINEAR SYSTEMS M A Rodrigues and D Odloak Department of Chemical Engineering University of S o Paulo CP 61548 05424 970 S o Paulo Brazil E mail odloak Musp br Received October 4 2001 Accepted December 27 2001 Abstract In this paper a new model predictive controller MPC which is robust for a class of model uncertainhes 15 developed Systems with stable dynamics and tme invanant model uncertainty are treated The development herein proposed is focused on real industrial systems where the controller is part of an on lme optimization scheme and works in the output trackmg mode In addition the system has a time varying number of degrees of freedom since some of the mampulated inputs may become constraned Moreover the number of controlled outputs may also vary dunng system operahon Consequently the actual system may show operating conditions with a number of controlled outputs larger than the number of available maripulated inputs The proposed controller uses a state space model which is aimed at the representation of the output predicted trajectory Based on this model a cost function is proposed whereby the output error is integrated along an infinite prediction honzon It is considered the case of multiple operating pomts where the controller stabilizes a set of models
21. 0 Florian polis SC Brasil Tel 55 48 249 9443 Fax 55 48 331 9542 61 Markup and Parser Appendix G Examples of markup in affiliation aff E mail kupek repensul ufsc br bbibcom hist Recebido para publica o em received dateiso 20001010 10 10 2000 received hist bbibcom Example 3 Alexandre M Valen a Antonio Egidio Nardi Isabella Nascimento Walter A Zin M rcio Versiani Y aboratory of Panic amp Respiration Institute of Psychiatry Federal University of Rio de J aneiro Rio de aneiro RJ Brazil UFRJ Laboratory of Respiration Physiology Carlos Chagas Filho Biophysics Institute UFRJ authgrp author role nd rid a01 fname Alexandre M fname surname Valenca surname author author role nd rid a0 1 fname Antonio Egidio fname surname Nardi surnamel authorl author role nd rid a01 fname Isabellal fname surname Nascimento surname author author role nd rid a02 fname Walter A fname surname Zin surnamel author1 author role nd rid a01 fhname M rciol fname surname Versiani surname author authgrp aff id a01 orgname Federal University of Rio de J aneiro orgdivi Institute of Psychiatry orgdiv2 Laboratory of Panic amp Respiration Laboratory of Panic amp Respiration Institute of Psychiatry Federal University of Rio de J aneiro city Rio de J aneiro city state R state country Brazil country af
22. 999 date city Pelotas city confgrp title language pt Anais title city Pelotas city pubname Sociedade Brasileira de Engenharia Agricola UFPel pubnamel date dateiso 19990000 1999 date othinfo 1 CD ROM othinfo omonog ocitat Dissertation or thesis RODRIGUES F A Fertiliza o silicatada na severidade da queima das bainhas Rhizoctonia solani Kuhn do arroz 2000 98 f Disserta o Mestrado Universidade Federal de Vi osa Vi osa ocitat omonog oauthor role nd surname RODRIGUES surname fname F A fname oauthor title language pt Fertiliza o silicatada na severidade da queima das bainhas Rhizoctonia solani Kuhn do arroz title date dateiso 20000000 2000 date extent 98 extent f thesis Disserta o degree Mestradol degree orgname Universidade Federal de Vicosal orgnamel city Vi osal city thesis omonog ocitat Paper presented in congress but not published MIRANDA NETO Antonio Garcia Terminologia cientifica and t cnica and barreiras a comunica o and automa o Rio de J aneiro 1969 Trab Apres Ao II Congresso regional sobre Documentac o and IX Reuni o da FID CLA 28 a 29 nov 1969 Rio deJ aneiro ocitat ocontrib oauthor role nd surname MIRANDA NETO surname fname Antonio Garcia fhame author title language pt Terminolog a cient fica and t cnica and barreiras comunica o and a aut
23. BIREME PAHO WHO Latin American and Caribbean Center on Health Sciences Information SciELO Methodology Markup and Parser Version 3 1 S o Paulo 2005 Copyright 2005 BIREME PAHO WHO Markup and Parser Permission is granted to copy distribute and or modify this document under the terms of the GNU Free Documentation License Version 1 2 or any later version published by the Free Software Foundation with no Invariant Sections no Front Cover Texts and no Back Cover Texts A copy of the license is included in the section entitled GNU Free Documentation License Card catalog BIREME PAHO WHO Brazil Markup and Parser BIREME org Sao Paulo BIREME PAHO WHO 2005 85 p 1 User manual 2 Information access 3 Information systems 4 Information management 5 Public health 6 Public Health services BIREME II Title Warning Any mention in this document to companies institutions persons or products are not an endorsement or recommendation given by BIREME PAHO WHO thus it does not mean a preference to a similar one cited or not BIREME PAHO WHO Latin American and Caribbean Center on Health Sciences Information Rua Botucatu 862 V Clementino This document was produced with the Documents Conformation Methodology NorDoc developed by BIREME Methodology document set The complete set consists of 9 documents SciELO Model Guide Secondary Pages Creati
24. Muller J lio Lopes Sequeira Ant nio de Castro Rodrigues Carlos Roberto Padovani Doctor of Veterinary Medicine School of Veterinary Medicine and Animal Science UNESP S o Paulo State University Botucatu Wacenciate Prnfecenr Nenartment nf Surmerv and Mrthanedire Sehonl nf Medicina om 4 Clicking on Markup and two options will be shown configuration and markup 3 2 1 Configuration Enables selection of the markup interface language English Spanish or Portuguese and informing the name of the individual in charge of the document be marked 11 Markup and Parser Markup W Microsoft Word aD4v20n3 i AR D xj Eile Edit View Insert Format Tools Table Window Help la x Dgnsrysnes ge PORE BOT Normal TimesNewRoman 12 BZ U E 332 E M nxnlaninal and hinmanhaninal cir or mf Markup Configuration E x abdi ental Markup Interface Language Markup R sible chro j id english ans sis Avali tesencontoscasessod de spanish ratos portuguese Clear Nereic z E iiller J lio L 0 Padov Doctor of Veterinary Medicine School of Veterinary Medicine and Animal Science UNESP S o Paulo State University Botucatu Uscenriato Professor Nenartment nf Surnere and Nrthanedice Srhnal of Medicine iQijiwi4 3 2 2 Markup DTD SciELO 3 1 allows initiating markup After clicking on Markup a button bar is displayed Markup begins by clicking
25. Plantas Medicinais do Brasil Universidade Federal do Paran Curitiba PR Brazil September 1992 75 ocitat no 4 no ocontrib oauthor role nd surname Santos surname fname JAR fnamel oauthor oauthor role nd surname Cruz surname fname AB fname oauthor oauthor role nd surname Maraschin surname fhame M fnamel oauthor oauthor role nd surname Queiroz surname fname FP fname oauthor oauthor role nd sumame Gorski surname fhame F fname oauthor oauthor role nd sumame Yunes surname fname RA fname oauthor oauthor role nd surname Calixto surname fname J B fnamel oauthor date dateiso 19920000 1992 date title language pt Produ o dos compostos ativos de Mandevilla velutina por cultura de tecidos in vitro title subtitle An lise qu mica and farmacol gica subtitle ocontrib In omonog title language pt Anais titleldo confgrp no XII no confname Simposio de Plantas Medicinais do Brasil confnamel sponsor Universidade Federal do Paran sponsor city Curitibal city state PR state country Brazil country date dateiso 19920900 September 1992 datel confgrp pages 75 pages omonog ocitat 6 Maraschin M amp Queiroz FP 1991 Curva de crescimento de callus de Mandevilla velutina Proced ncia Cerrado In Anais do III Encontro de Bot nicos PR SC Universidade Federal de Santa Catarina Florian
26. RELATO DE CASO 1gn front titiegrp title languagespr JEspondi lodiscite brucel sica titiel ign ign subtitiejrelato de aso subtitiej ign tqn t tle lanquegesenjbrucella spondylodiecitis titie ign Vigm lmbritlejcase eport subtitle titiegrp ign 1qn eurhgrp eurhor tole nd cid a01 Cname C sar Ribeiro Cname iqm Ferreira ign ign euthor colesnd cid 801 CnamejCeiso Ribeiro Enane 100 1qn surnane Ferreiral surname author ignjl 1gn author roleend tid 802 fname Thiago ade fnane 1gn 10n suenane JTatagiba surnene euthor ign 2 e 1qn author role nd cid 903 nane Jodo Tadeu Damsan Cname 1qn 19n surname Souto Filho furmane author ign 3 ign euthgrp ign ign bibcom ign Resumo ign abstract language pt A localiza o vertebral da brucelose apresenta cort ncia pouco frequente atualmente Por este motivo indispens vel a aten o para as modifica es eS l EnoTout fz 7 Dj AAPEEE o deei wie yera waco se SOR zam 35 Markup and Parser Appendix A General structure of articles in electronic journals article front titlegrp m title authgrp To author role rid m name corpauth m org bibcom m bib body back bbibcom m bib vancouv standard count m van is0690 standard count m iso abnt6023 standard count m a
27. and making it difficult to have errors in other words the program induces users to comply with the standards included in DTD structure However it is up to the operator to identify each element in the text and mark them up according to the structure available Markup and Parser Introduction After conclusion of markup the program Parser may be used to check the file marked and to identify possible markup errors according to DTD SciELO 3 1 structure 3 Markup In the program Markup version 3 1 each hierarchic level of the tree see Appendix 1 is represented by a button bar with its respective elements and tags enabling an easy navigation and controllingthe position of each element within the text The program allows only the correct insertion of one tag following the DTD tree or exclusion in case of error in text element identification The button bars that make interface with users are always available 3 1Requirements to initiate Markup e The files should be in HTML e Thefiles must have been previously checked to assure there are no differences between the electronic file in HTML and the article published in printed journal or other media e The base Title should be filled out with information about the issue to be marked total number of files existing sections journal ISO date etc e Title should be updated in the user s computer Copy the files en_ issue mds es_issue mds and pt_issue mds that are in direct
28. arity of the osseous structure and widenning of the proximal region of the fifth metatarsus black arrow inset retention of the constrast technetium 99m MDP is observed on the right foot during whole body scintigraphy REFER NCIAS BIBLIOGR FICAS 1 Borgia G Reynaud L Cerini R Ciampi R Schioppa O Dello Russo M Gentile I Piazza M A Case of paracoccidioidomycosis experience with long term therapy Infection 28 119 120 2000 2 Fulciniti F Troncone G Faxioli F Vetrani A Zeppa P Manco A Palombini L Osteomyelitis by Paracoccidioides brasiliensis South American Blastomycosis cytologic diagnosis on fine needle aspiration biopsy smears a case report Diagnostic Cytopathology 15 442 446 1996 3 Nogueira SA Guedes AL Wanke B Capella S Rodrigues K Abreu TF Morais JC Lambert J S Osteomyelitis caused by Paracoccidioides brasiliensis in a child from the metropolitan area of Rio de J aneiro Journal of Tropical Pediatrics 47 311 315 2001 1 affid a01 orgname Universidade Federal de Minas Gerais orgdiv1 Departamento de Cl nica M dica orgdiv2 Servi o de Doen as Infecciosas and Parasit rias Servi o de Doen as Infecciosas and Parasit rias do Departamento de Cl nica M dica da Universidade Federal de Minas Gerais citylBelo Horizonte city state MG state aff 2 aff id a02 orgname Universidade Federal de Minas Gerais orgdiv1 Faculdade de Medicina orgdiv2 Departamento de Anatomia Patol
29. bnt other standard count m_ other i float text titlegrp m title oe MEN author role rid y m name corpauth m org i float 36 Appendix B Article marked according to DTD Scielo 3 1 article pii nd doctopic oa language es ccode br1 1 status 1 version 3 1 type tab order 04 seccode RESP020 sponsor nd stitle Rev Esp Salud Publica volid 74 issueno 4 dateiso 20000800 fpage 00 Ipage 00 issn 1135 5727 front titlegrp title language es Utilizaci n de anfotericina B no convencional en el Hospital Cl nico de San Carlos title titlegrp authgrp author role nd rid a01 fhame Concepci n fname surname Prieto Yerro surname author 1 author role nd rid a02 fname Elisa fname surname P rez Cecilia surname author 2 author role nd rid a03 fname Maria Isabel fname surname Ambit Avilal sumamel author 3 y author role nd rid a02 fname uan J os fname surname Picazo de la Garzal surname author authgrp 2 1 aff id a01 orgname Hospital Cl nico de San Carlos orgdiv1 Servicio de Farmacolog a Cl nica Servicio de Farmacolog a Cl nica Hospital Cl nico de San Carlos city Madrid city aff 2 aff id a02 orgname Hospital Cl nico de San Carlos orgdiv1 Servicio de Microbiolog a Servicio de Microbiolog a Hospital Cl nico de San Carlos city JMadrid city aff 37 Markup and
30. city pubname Fac Filos Ci ncias and Letras pubname date dateiso 19910000 1961 date extent 666 extent p amonog acitat Dissertation or thesis 52 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards MACEDO Neusa Dias de Bibliografia de Oliveira Lima con estudo biogr fico and cronologia Washington DC 1967 Diss mestr Catholic University of America Dept of Library Science acitat amonog author role nd surname MACEDO surname fname Neusa Dias de fnamel author title language pt Bibliografia de Oliveira Lima con estudo biogr fico and cronologial title thesis city Washingtonl city state DC state date dateiso 19670000 196 71 date Diss degree mestr degree orgname Catholic University of Americal orgname orgdiv Dept of Library Sciencel orgdiv thesis amonog acitat Paper presented in congress but not published 1 MIRANDA NETO Antonio Garcia Terminologia cientifica and t cnica and barreiras a comunicac o and a automac o Rio deJ aneiro 1969 Trab Apres Ao II Congresso regional sobre Documenta o and IX Reuni o da FID CLA 28 a 29 nov 1969 Rio de J aneiro acitat no 1 no acontrib author role nd surname MIRANDA NETO surname fname Antonio Garcia fname author title language pt Terminologia cient fica and t cnica and barreiras a comunicac o and
31. d by fields For example in a file called customer base each customer is a record with several fields such as NAME CUSTOMER CODE TELEPHONE etc DeCS Server Application developed by Bireme using the IsisScript language to manage the database of health descriptors DeCS Descriptor Embodies a concept accepted in a controlled vocabulary like a thesaurus DTD SciELO Describes the article structure and other periodic texts of scientific identifying and defining of necessary form its structure and the bibliographical elements constituent the context 30 Markup and Parser Glossary where they appear its obligatoriness and its attributes The DTD is used for the description and computerized treatment of texts Editorial Committee Group of professionals and specialists of the publication area of a periodical whose objective is to establish the rules and editorial conventions and to evaluate the contributions received by the publication to guarantee a certain quality standard Electronic Format Any form of storage retrieval or presentation of information that may be transmitted on line or recorded in magnetic or optical media m Field See Database File In computing a set of data that may be saved into some type of storing device The data files are created by applications such as a text processor for example Glossary Vocabulary for specific or controlled use used in publications to clarify t
32. d procedures have not been followed For example If a text being marked has not been selected Ifthe value of a mandatory attribute has not been filled out When the user tries to incorrectly insert a tag in an inappropriate place not complying with the DTD structure Example of a mandatory attribute not filled out x ES Invalid Data dateiso Example of incorrectly inserted tag 22 Markup and Parser Program error messages Inserting Tag xi Q Error inserting the tag Example of attempt to insert a tag with no previous selection of the text to be marked Inserting Attribute x X Select the text to markup The description of the elements used by DTDs SciELO is provided in item 5 of DTD SciELO version 3 1 documentation available at lt http www scielo org dtd sumario pt htm gt 23 6 Parser Parser is a program that checks markup and shows possible mistakes related to DTD structure Upon conclusion of markup select save as TXT and use Parser now Parser will automatically open the marked file in Markup 24 Markup and Parser Parser Microsoft Word Eile Edt Yiew Insert Format Tools Table Window Help DESAY 2 AS o Ge BERA SA 1 Normal Verdana 10 B 7 y EFE EEEO 72 A article pii nd doctovic 0a lanauaae pt ccode br1 1 status 1 version 3 1 type ih Markup DTD Scielo 3 0 TXF Quim Nova volid 28 issL Finish Markup 01 issn 0100 4042 ffrontla G Save an TXT Format
33. development of health including its planning management promotion research education and care The agreement that supports BIREME is renewed every five years by the members of the National Advisory Committee of the institution PAHO Brazilian Ministry of Health Brazilian Ministry of Education and Culture Secretary of Health of the State of S o Paulo and Federal University of S o Paulo Unifesp The latter provides the physical infrastructure necessary for the establishment of the institution In 2004 the institution took on the responsibility of becoming a knowledge based institution Markup and Parser Preface 1 2The Virtual Health Library VHL With the rise and consolidation of the internet as the prevailing means of access to information and communication BIREME s technical cooperation model evolved as of 1998 to build and develop the Virtual Health Library VHL as a common space for the convergence of the cooperative work of producers intermediaries and users of information The VHL promotes the development of a network of sources of scientific and technical information with universal access on the internet For the first time there has been a real possibility of equal access to health information To BIREME the Virtual Health Library is a model for the management of information and knowledge which includes the cooperation and convergence between institutions systems networks and initiatives of producers inter
34. development of local capacities on sharing information resources on developing cooperative products and services on designing common methodologies has always been the foundation of BIREME s technical cooperation work It has been like this that the center established itself as an international model that fosters professional education Markup and Parser Preface with managerial and technical information with the adoption of information and communication paradigms that best meet local needs The main foundations that gave origin and which support the existence of BIREME are following Y access to scientific and technical health information is essential for the development of health v the need to develop the capacity of Latin American and Caribbean countries to operate their sources of scientific technical health information in a cooperative and efficient manner Y the need to foster the use and to respond to the demands for scientific technical health information from governments health systems educational and research institutions BIREME as a specialized center of the Pan American Health Organization PAHO World Health Organization WHO coordinates and conducts technical cooperation activities on the management of scientific information and knowledge with the aim of strengthening and expanding the flow of scientific health information in Brazil and in other Latin American and Caribbean countries as a key condition for the
35. duenda de Medicina Veterin ria eft 1d s02 orgnamer UFRGS orgdivie Faculdade de Veterin ria 2Greduande de Medicina Veterin ria Faculdade de Veterin ria de UFFGS af 3 aff 1d 803 orgnane UFRGS orgdivi Faculdade de Veterin ria 3Faculdade de Veterin ria da UFRGS Caixa Postal 15005 zipcade 91501 970 21peode city Porte Alegre city state JPS state aff bibcom hist Recebido pare publica o em 29 de agosto de 2000 Recebido para publica o ap s modifica es em received dateiso 20010417 717 de abril de 2001 received hist hitor para correspond ncia E mail enapr dna cbiot ufrgs br Recursos financeiros teport reponsor J orgnaae CNP q orgnane reponsor bolsas rsponsor orgnaae FAPERGS argnase processo contract 96 0322 4 contract rsponsor rsponsot JPRONEX em Virologia Veterin ria orgnane FIMEP orgnaxe contract 215 96 contract reponsor report sumo abstract language pt 0 objetivo deste trabalho foi analisar amostras de soro e de c lulas sangu neas de caprinos para detec o de anticorpos e DMA proviral do virus da artrite encefalite caprina CAEV respectivamente Utilizou se a t cnica de imunodifus o em gar AGED q ten o em cadeia de polinerase PCR OI IVC AR AR ra UT Tp PTE ei er gt gt PEE TDS NC N CTE rei Rom em ra zi O A EN 25 Markup and Parser Parser Before using Parser to verify markup check if configuration op
36. e predefined text etc Thematic area Specific set of information on the subject matter of a VHL which allows user topic based navigation Treatment Level Codified definition of the degree of depth applied to the document upon its bibliographic description URL Standard defined for the addressing of data contents via the TCP IP protocol Internet browsers use the URL to access Web pages Vancouver Group Was created in 1978 for the elaboration of articles including the norms for the bibliographical references and was supportted of the National Library 33 Markup and Parser Glossary XML Language created to allow the arrangement of data in a structured and hierarchical manner thus facilitating data communication between different systems and platforms 34 Appendix A General structure for article and text RE SGML Parser PASCIELO PROCVO credo renal 3 ada 03503 tet Ele Puse Conigsaton Heb NAMES SGMLPEF QUANTITY SOMLREF FEATURES MINIMIZE DATATAG NO OMITTAG YES RANK NO SHORTTAG YES LINK SIMPLE WO IMPLICIT NO EXPLICIT MO OTHER CONCUR MO SUBDOC MO FORMAL NO APPINFO NONE gt DOCTYPE article SYSTEM C 13CIELO1BIM IGMLPARS art3_1 dt4 gt article piiend doctopicece langusgespt ccode br1 1 statusel version 3 1 typerilus order 10 seccode RSENTIZO isponsocend stitles Rev Soc Bras Ned Trop volid 35 issuenos3 dateisos20070600 fpage 255 lpage 258 isen 0037 8682 ign J
37. e program center department Only institutional e mails should be marked personal e mails of researchers should not be marked In case the name of the institution is in full and accompanied by its acronym mark only the name in full Example 1 Solange G Garibaldi Anamarli Nucci 2MD PhD Department of Neurology Campinas University UNICAMP Campinas SP Brazil 60 Markup and Parser Appendix G Examples of markup in affiliation aff authgrp author role nd rid a01 fhame Solange G fname surname Garibaldi surname author author role nd rid a0 1 fname Anamarli fname surname Nucci surnamel author authgrp 2MD PhD aff id a01 orgname Campinas University orgdivi Department of Neurology Department of Neurology Campinas University UNICAMP cityJCampinas city state SP state country Brazil country aff Example 2 Andr Iwersen de Sao Thiago Emil Kupek2 Joaquim Alves Ferreira Neto and Paulo de Tarso S o Thiago 1 Departamento de Engenharia El trica do Centro Tecnol gico da Universidade Federal de Santa Catarina Florian polis SC 2 Departamento de Sa de P blica do Centro de Ci ncias de Sa de da Universidade Federal de Santa Catarina Florian polis SC 3 Funda o Nacional de Sa de do Minist rio da Sa de Bras lia DF Address to Prof Emil Kupek Dept de Sa de P blica CCS UFSC Campus Universit rio Trindade 88040 900 Florian pol
38. e title manager tgother indicates that the other standard is adopted by the journal Arq Bras Med Vet Zootec acitat abmvz amd tgabnt amd ABNT Arg Neuro Psiquiatr vcitat anp amd tgvanc amd ANCOUVE Bragantia ocitat brag amd tgother amd OTHE automata mds file with the list of some titles e Thefiles should always be in the amd format to enable the marking program to recognize them They may be opened and changed in a notepad e Filename rx amd The name of the file is its acronym in the SciELO collection There should be no special characters and or uppercase letters and or spaces 70 Markup and Parser N C SciELO Bin markup Appendix J Automatic Marking Automata File Edit View Favorites Tools Help Back gt gt QSearch A Folders SUS GE X 9 E Address CI CASciELOSBinmarkup Folders Local Disk C E SciELO 9 adm EDS Bin C codes _ ca config 9 convert ED db2sgml SA I SGMLPars a updissue aabc amd E abb amd abc amd abem amd E abmyz amd acb amd automata dl E automata mds babt amd E bjce amd e Thejournal s bibliographic references should follow a common standard accross all the articles It is important that the punctuation and spacing rules be followed If they are different from those established in the file that defines the structure of the program the program will be unable to recognize t
39. en unidades de cuidados intensivos La trascendencia cl nica de estas infecciones es a n mayor en los pacientes que se someten a trasplante de m dula sea u otros tipos de trasplantes en un estudio realizado en 1995 por la European Bone Marrow Transplantation European Organization for Research and Treatment of Cancer sobre las infecciones f ngicas invasoras en trasplantados de m dula sea en 19 centros europeos la incidencia de estas infecciones fue del 11 2 y la mortalidad por candidiasis fue del 58 por aspergillosis del 76 y por otras infecciones f ngicas del 54 coste sanitario derivado de la atenci n a los pacientes con infecciones f ngicas sist micas as como la gran morbilidad y mortalidad asociada se plantea el siguiente estudio con los objetivos de conocer la utilizaci n de la AB noC ABL y ABM desde un punto de vista cuantitativo y cualitativo y evaluar la repercusi n econ mica de su uso inapropiado en nuestro hospital SUJ ETOS Y METODO El estudio se ha realizado en el Hospital Cl nico Universitario de San Carlos entre julio de 1998 y septiembre de 1999 Es un centro con actividad docente que funciona como hospital terciario de referencia cuenta con 1 100 camas y Servicios de Hematolog a y Oncolog a en los que se realizan trasplantes aut logos de m dula sea Los datos se introdujeron en una base de datos de program ACCESS 97 y se analizaron con el program SPSS 8 0 de Windows Se realiz un an lisis descrip
40. f UFR J 2 aff id a02 orgname Federal University of Rio de J aneiro orgdiv1 Carlos Chagas Filho Biophysics Institute orgdiv2 Laboratory of Respiration Physiology ILaboratory of Respiration Physiology Carlos Chagas Filho Biophysics Institute UFRJ aff Example 4 Joel C de Castro Departamento de Geologia Aplicada I G C AND UNESP Campus de Rio Claro SP Rosemarie Rohn Departamento de Geologia Aplicada I G C AND UNESP Campus de Rio Claro SP Marilia R de Castro P s graduando I G USP S Paulo Carlos Eduardo V Toledo P s graduando I G C AND UNESP Rio Claro authgrp author role nd rid a01 fname oel C de fname surname Castro surname author aff id a01 orgname UNESP orgdiv1 1 G C AND orgdiv2 Departamento de Geologia Aplicada Departamento de Geologia Aplicada I G C AND UNESP Campus de city Rio Claro city state SP state aff 62 Markup and Parser Appendix G Examples of markup in affiliation aff author role nd rid a01 fname Rosemariel fname surname Rohn surname author Departamento de Geologia Aplicada 1 G C AND UNESP Campus de Rio Claro SP author role nd rid a02 fname Marilia R del fname surname Castro surname author P s graduando aff id a02 orgname USP orgdiv1 I G I G USP city S Paulo city aff author role nd rid a01 fname Carlos Eduardo V fname surname Toledo surname author authgr
41. ge en Cyclotron waves in plasma title subresp role tr Translated by fname AN fname surname Dellis surname subresp edited by subresp role ed fname SM fname surname Hamberger surnamel subresp edition 1 edition st ed city Oxford city pubname Pergamon Press pubname date dateiso 19810000 1981 date pages 206 pages p coltitle International series in natural philosophy l coltitle notes Translation of Ciklotronnye volny v plazmef notes ISBN isbn 0 08 021680 3 isbn imonog icitat 3 Bibliographic references accordingto ABNT 6023 89 standard acitat Examples Journal article 51 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards COELHO NETTO J os Teixeira A biblioteca como modelo de comunica o Revista Brasileira de Biblioteconomia and Documenta o S o Paulo v 1 n 1 2 p 29 32 jan jun 1978 acitat acontrib author role nd surname COELHO NETTO surname fname os Teixeiral fnamel author title language pt A biblioteca como modelo de comunicacao title acontrib aiserial sertitle Revista Brasileira de Biblioteconomia and Documenta o sertitle city Sao Paulo city v volid 1 volid n issueno 1 2 issueno p pages 29 32 pages date dateiso 19780100 jan jun 1978 date aiserial acitat Monograph chapter AZEVEDO Fernando de A escola and a litera
42. gica Departamento de Anatomia Patol gica da Faculdade de Medicina da Universidade Federal de Minas Gerais city Belo Horizontel city state MG state aff Endere o para correspond ncia Prof J os Roberto Lambertucci Dept de Cl nica M dica FM UFMG Av Alfredo Balena 190 30130 100 Belo Horizonte MG Brasil E mail lamber medicina ufmg br Recebido para publica o em 20 2 2002 text 42 Appendix D Types of Document abstract An accurate and summarized presentation of a paper free from interpretation or criticism accompanied by the bibliographic reference of the original paper announcement Public announcements or paid announcements usually printed on periodicals and journals attachment Some journals publish documents such as glossaries errata etc brief communication Includes brief reports on experiments papers or research projects underway case report Brief description of special cases which because of their rareness are of interest to the community comments A note with criticism or clarification written to discuss support or debate an article or other information previously published Comments may be in the form of an article a letter an editorial etc and may appear as comments editorial comments points of view etc 43 Markup and Parser Appendix D Types of Document editorial A statement of opinions beliefs and policies written by the editor of a journal usuall
43. he references Below is an example of the automaton of the Acta Botanica Brasilica journal abb amd The SciELO marking program will be able to recognize bibliographic references that are articles of journals contrib de oiserial and will insert the respective tags according to the separators of each new piece of data Reference Carlson R E Monem N N Arjmand O amp Shaw R H 1979 Leaf condutance and leaf water potential relationship for two soybeans cultivars grown under controlled irrigation Agronomy J ournal 71 321 325 The automaton works based on the concept of different states It is necessary to foresee all the states that may occur in the bibliographic reference for which it is possible to run the automaton These references may be articles of a periodical chapters of books or theses and dissertations etc Let s start from the general level ocitat down to the specific level indicating each one of the parts that composeit In the example ocontrib and oiserial 71 Markup and Parser Appendix J Automatic Marking Automata 01 02 NT ocontrib 02 03 NT oiserial In the example above there are three states 01 02 03 which the program will use 01 02 NT ocontrib means that from state 1 to 2 the ocontrib tag will be inserted in the reference the separator being the point and the space NT indicates that ocontrib is a non terminal element composed of other tags The
44. he 1950s PubMed includes links to full text articles and other related resources Quotation Excerpt originally written by a third person Quotations appear between inverted commas in a publication with a mention to the author Scientific production Collation gathering and analysis of all the literature on a certain theme or literature produced by a specific author for the purpose of analysis especially of a quantitative nature SGML Metalanguage standard of the ISO International Organization for Standardization used for the definition of languages of marking 32 Markup and Parser Glossary of electronic texts making possible the interchange and the distribution of documents in the most varied formats from one same source of data Style Element which defines the form of a character a set of characters or a paragraph for viewing or printing purposes See template Stylesheet File which contains the definition of the styles of a publication See also template m Technical Cooperation Exchange between developing countries or between developing countries and developed countries to enable cooperation in certain areas such as the exchange of specialists and faculty members development or transfer of technology exchange of information exchange of information and experiences to improve sanitary conditions Template File which contains the basic definition of the type of document that will be used with styl
45. he meaning of technical or restricted terms which are not widely used Guide Defines the processes needed for the production of a source of information or phases of a methodology Indexing Procedure to identify and describe the content of a document with terms that reflect the corresponding subject matters to allow the document to be retrieved later ISO Format of files Standard established by the ISO to allow the exchange of data between institutions networks and users 31 Markup and Parser Glossary LILACS Format A bibliographic description format established by BIREME based on the UNISIST Reference Manual for Machine readable Bibliographic Descriptions Manual Set of steps and operations whether automatic or manual required to provide users with instructions on a certain application program or methodology Methodology Set of rules and conventions used to standardize a process or the production of a source of information National Coordinating Center Institution that cooperates with the VHL and whose primary role is the coordination of a region s cooperating centers PDF File format developed by Adobe whose objective isto maintain the presentation format of a document designed for printing when this document is stored in digital media PubMed Service of the National Library of Medicine that includes over 15 million citations from MEDLINE and other life science journals for biomedical articles back to t
46. id 1 volid Revised by subresp role ot fname Wd fname surname Lang sumamel subresp city London city pubname Macmillan pubname date dateiso 19300000 1930 datel imonog icontrib Section section 12 section title language en Phylum Molluscal title p pages 663 782 pages icontrib icitat PRICE Derek de Solla A general theory of bibliometric and other cumulative advantage processes In GRIFFTTH Belver C Key papers in information science New York Knowledge Industry Publications 1980 p 177 191 icitat icontrib author role nd surname PRICE surname fname Derek de Solla fnamel author title language en A general theory of bibliometric and other cumulative advantage processes title icontrib In imonog author role nd surname GRIFFITHI surname fname Belver C fname author title language en Key papers in information sciencel title city New York city pubname Knowledge Industry Publications pubname date dateiso 19800000 1980 date p pages 177 191 pages imonog icitat Complete monograph LOMINADZE DG Cyclotron waves in plasma Translated by AN Dellis edited by SM Hamberger 1st ed Oxford Pergamon Press 1981 206 p International series in natural philosophy Translation of Ciklotronnye volny v plazme ISBN 0 08 021680 3 icitat imonog author role nd surname LOMINADZE surname fname DG fname author title langua
47. ion etc Corpauth it identifies the corporate author responsible for the intellectual or artistic content of the work e Bibcom it assembles the complementary elements to identiify the article the article such as abstract keywords etc It contains Abstract it identifies the abstract of the article Keygrp it assembles the elements for the thematic description of a document Confgrp it assembles the elements to identify an event such as conference seminar congress etc contained in annals and similar publications Report it gathers information about the project of which the article is a partial or final product Thesgrp it gathers the elements needed to identify a thesis or dissertation or the elements derived from a thesis or dissertation Hist it identifies the history of publishing an article in a journal comprising dates it was received accepted or revised Title it identifies the title Subtitle it identifies the subtitle 3 2 2 2 Body The second element of this hierarchic level to be identified is body which indicates the body of an article or text which may be composed of several sections such as introduction methodology description and conclusions as well as illustrations tables figures etc Markup and Parser Markup 3 2 2 3 Back The third element is back which the final elements of an article where complementary information such as abstract and bibliographic references
48. ional amphotericin B amphotericin B notC was evaluated retrospectively together with the financial repercussions of its inappropriate use RESULTS In 54 of the treatments studied a poor selection of amphotericin B was made in 3 5 the use of amphotericin B was not indicated The excess expenditure derived from the inappropriate use amounted to 42 million pesetas 35 of the total expenditure on medicines the expenditure due to unnecessary prescription was 1 720 327 pesetas CONCLUSIONS The retrospective evaluation has shown that there is a high percentage of treatments that do not conform with the recommendations contained in the prescription rules 38 Markup and Parser Appendix B Article marked according to DTD Scielo 3 1 The holding of information sessions would assist in achieving a more efficient selection of the amphotericin B notC this would improve prescription quality which might also deliver significant financial savings abstract Key Words keygrp scheme nd keyword type m language en Amphotericin Bl keyword keyword type m language en Fungal infections keyword keyword type m language en Study of the use of medicines keyword keygrp bibcom front body INTRODUCCION Las infecciones f ngicas sist micas graves son causa de importante morbilidad y mortalidad entre los pacientes inmunodeprimidos tratados con quimioterapia intensiva inmunosupresores enfermos de sida y entre los atendidos
49. is SC Brasil Tel 55 48 249 9443 Fax 55 48 331 9542 E mail kupek repensul ufsc br authgrp author role nd rid a01 fname Andr Iwersen de fname surname S o Thiago surname author author role nd rid a02 fhname Emil fname surname Kupek surname author 2 author role nd rid a03 fhame J oaquim Alves fname surname Ferreira Neto surname author and author role nd rid a02 fname Paulo de Tarso fname surname Sao Thiago surnamel author authgrp 1 aff id a01 orgname Universidade Federal de Santa Catarina orgdiv1 Centro Tecnol gico orgdiv2 Departamento de Engenharia El trica Departamento de Engenharia El trica do Centro Tecnol gico da Universidade Federal de Santa Catarina city Florian polisl city state SC state aff 2 aff id a02 orgname Universidade Federal de Santa Catarina orgdiv1 Centro de Ci ncias de Sa de orgdiv2 Departamento de Sa de P blica Departamento de Sa de P blica do Centro de Ci ncias de Sa de da Universidade Federal de Santa Catarina city Florian polis city state SC state aff 3 affid a03 orgname Minist rio da Sa de orgdiv1 Centro de Ci ncias de Sa de orgdiv2 Fundac o Nacional de Sa de Funda o Nacional de Sa de do Minist rio da Sa de city Bras lial city state DF state aff Address to Prof Emil Kupek Dept de Sa de P blica CCS UFSC Campus Universit rio Trindade 88040 90
50. ives and the production of statistical indicators of the scientific literature usage and impact The methodology includes also journal evaluation criteria based on international scientific communication standards SciELO full texts are enriched with dynamic hypertext links with national and international data bases as for example LILACS and MEDLINE The SciELO Model s second component is the application of the SciELO Methodology to operate web sites of collections of electronic journals The SciELO Model envisages the operation of national sites as well as thematic sites The pioneer application is the SciELO Brazil site lt http www scielo br gt Nowadays Chile lt http www scielo cl gt and Cuba lt http www scielo sld cu gt are also operating applications regularly Several other countries are evaluating and or being trained on the SciELO Methodology SciELO Public Health lt http www scielosp org gt a regional thematic library covering Public Health scientific journals from Latin America and Spain was launched in December 1999 A portal to integrate and provide access to the network of SciELO sites operates at lt http www scielo org gt The Model s third component is the actual development of partnerships among national and international scientific communication players authors editors scientific and technological institutions funding agencies universities libraries scientific and technological inf
51. mediaries and users in the operation of networks of local national regional and international information sources favoring open and universal access Today every country in Latin America and the Caribbean Region participates either directly or indirectly in the cooperative products and services offered by the VHL which includes over 1 000 institutions in more than 30 countries The VHL is simulated in a virtual space of the internet formed by a collection or network of health information sources in the Region Users of different levels and locations can interact and navigate in the space of one or many information sources regardless of where they are Information sources are generated updated stored and operated on the internet by producers integrators and intermediaries in a decentralized manner following common methodologies for their integration in the VHL The VHL organizes information in a structure that integrates and interconnects reference databases specialist directories events and institutions a catalogue of the information resources available on the internet collections of full texts with a highlight for the SciELO Scientific Electronic Library Online collection of scientific journals selective information dissemination services information sources to support education and decision making news discussion lists and support to virtual communities The space of the VHL is therefore a dynamic and Markup and Parser P
52. n the field should be filled out as 0 0 If the initial and final pages are the same the field should be completed repeating the same number separated by a hyphen for example 10 10 If the total number of pages is less than 10 do not include a O before for example 1 18 e Version identifies the DTD version used in the markup process The current version is 3 1 e Doctopic the type of document to be marked For example original article review etc e Language language of the text to be marked e Toccode indicates the titles that should appear in the electronic summary of the journal Qualified only for documents type text e title the section title and the article title will be displayed e sectitle only the section title will be displayed e Type indicates if the document has tables graphs etc or if it has no such material e Sponsor identifies the institution that finances or sponsors the journal In case of no financial sponsor select not defined nd e Ccode identifies the code of the center processing the article that is the institution responsible for marking up the journal Markup and Parser Markup e Seccode indicates the name of the section of an issue corresponding to the document to be marked After filling out the form and confirming data click on Continue In an HTML document as previously selected the initial article or text and final article or text tags will be shown
53. n de Guerra and Paz Casa Grande amp Senzala and a obra de Gilberto Freyre nos anos 30 Rio de J aneiro Editora 34 1994 ocitat omonog oauthor role nd surname Ara jo surname fname Ricardo de Benzaquen de fname oauthor title language pt Guerra and Paz title subtitle Casa Grande amp Senzala and a obra de Gilberto Freyre nos anos 30 subtitle city Rio deJ aneiro city pubname Editora 34 pubnamel date dateiso 19940000 1994 date omonog ocitat 56 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards Elvira Mea A inquisi o de Coimbra no Sec XVI A institui o os Homens and a Sociedade Porto 1997 ocitat omonog oauthor role nd fname Elvira fname surname Mea surname oauthor title language pt A inquisi o de Coimbra no Sec XVI title subtitle A institui o os Homens and a Sociedade subtitle city Porto city date dateiso 19970000 1997 date omonog ocitat Maria Margarida Sobral da Silva Neto Regime Senhorial and vida agr ria Mosteiro de Santa Cruz and a regi o de Coimbra 1700 1834 Coimbra 1991 ocitat omonog oauthor role nd fname Maria Margarida Sobral dal fname surname Silva Neto surname oauthor title language pt Regime Senhorial and vida agr rial title subtitle Mosteiro de Santa Cruz and a regi o de Coimbra 1700 1834 subtitle city Coimbral ci
54. n innecesaria de AB noC fue de 1 720 327 pesetas y el derivado de la prescripci n de AB noC para la profilaxis de la aspergillosis fue de alrededor de 3 millones de pesetas 7 sobre el total DISCUSION El uso de la AB noC ABL yABM se ha incrementado notablemente en los ltimos a os en nuestro hospital El desarrollo de las formulaciones de AB asociadas a l pidos AB en complejo lip dico y AB en complejo liposomal ha determinado adem s un cambio en el patr n de utilizaci n de AB y 39 Markup and Parser Appendix B Article marked according to DTD Scielo 3 1 una considerable variabilidad interpr ctica a la hora de seleccionar la AB En nuestro estudio se demuestra que globalmente y desde una perspectiva cl nica el uso de AB noC fue adecuado pero poco eficiente Los resultados de nuestro estudio indican que la calidad de la prescripci n de la AB noC no ha sido ptima La falta de unas normas de uso expl citas es probablemente una de las causas que explican las diferencias de criterio encontradas el desarrollo de las normas de utilizaci n de AB y su divulgaci n pueden contribuir a racionalizar la prescripci n y a reducir el coste innecesario body back other standard other count 6 BIBLIOGRAFIA ocitat no 1 no ocontrib ocorpaut orgname EORTC International Antimicrobial Therapy Cooperative Group orgname ocorpaut title language en Empirical antifungal therapy in granulocytopenic patients title
55. n topics as follows Introduction presents a brief explanation on the markup and parser programs and their functionalities Markup explains in detail with illustrations the procedures to use markup Program buttons describes the function of each button of the program Program s error message shows the program s most frequent error messages and explains why each on appears Parser demonstrates howto use the Parser program The manual also contains 10 attachments among them are markup examples description of types of documents and references individual control spreadsheets besides a guide on the automata VII 1 Preface 1 1About BIREME Year after year BIREME has been following its mission of being a center dedicated to scientific and technical health information for the region of Latin America and the Caribbean Founded in Brazil in 1967 under the name of Regional Medicine Library which the acronym BIREME comes from it has always met the growing demand for up to date scientific literature from the Brazilian health systems and the communities of healthcare researchers professionals and students Then in 1982 its name changed to Latin American and Caribbean Center on Health Sciences Information so as to better express its dedication to the strengthening and expansion of the flow of scientific and technical health information across the region but kept the acronym Networking based on decentralization on the
56. nection with an application such as the creation or edition of texts drawings animations layout etc E g text processor database manager Internet browser etc Backup Procedure used to duplicate one or more files and or directories in another storing device tape or disc thus producing a backup copy that may be restored in the event of accidental deletion or physical damage to the original data Bibliograhic Database Electronic version of a catalog or bibliographic index 29 Markup and Parser Glossary Bibliographic Description Description of a bibliographic item by using attributes such as author title edition size etc Browser Internet page navigator such as Internet Explorer and Netscape Navigator CDS ISIS MicrolSIS Software programs developed and maintained by UNESCO to treat bibliographic data m CGI The Common Gateway Interface is a standard for interfacing external applications with information servers such as HTTP or Web servers Controlled or structured vocabulary Colection of related terms organized according to a methodology in order to facilitate the access to the information previously indexed with those terms Cooperating Center Institution that participates in the VHL and or contributes bibliographic records to Bireme Database Collection of data that are structured to be easily accessed and handled It is formed by units called records whose attributes are represente
57. no ocontrib oauthor role nd surname Porter surname fname NRI fname oauthor date dateiso 19830000 11983 datel title language en Euglobulin clot lysis timel title ocontrib omonog ocorpaut orgname European Concerted Action of Thrombosis and Disabilities orgname ocorpaut title language en Assay Procedures title coltitleJECAT Manual coltitle No volid 2 volid omonog ocitat 57 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards 8 Lee HJ amp Kang HS 1999 Sequence analysis of 42B11 fosmid clone of Zymomonas mobilis ZM4 EMBL GenBank database protein accession No AAD53895 at lt hhtp www ncbi nlm nih gov gt ocitat no 8 no omonog l oauthor role nd surname Lee surname fhame H fname oauthor amp oauthor role nd surname Kang surname fname HS fname oauthor date dateiso 19990000 1999 date title language en Sequence analysis of 42B11 fosmid clone of Zymomonas mobilis ZM4 title othinfoJEMBL GenBank database protein accession No AAD53895 at lt hhtp www ncbi nlm nih gov gt othinfo omonog ocitat Complete annals 4 Santos AR Cruz AB Maraschin M Queiroz FP Gorski F Yunes RA amp Calixto J B 1992 Produ o dos compostos ativos de Mandevilla velutina por cultura de tecidos in vitro An lise qu mica and farmacol gica In Anais do XII Simp sio de
58. ntific and technical serials title icontrib iiserial sertitle Special Libraries sertitle date dateiso 19770700 J uly Aug 1977 date vol volid 68 volid no issueno 7 8 issueno p pages 241 251 pages iiserial icitat WEAVER William The collectors command performances Photography by Robert Emmett Bright Architectural Digest December 1985 vol 42 no 12 p 126 133 icitat icontrib author role nd surname WEAVERI surname fname William fname author title language en The collectors title subtitle command performances subtitle Photography by subresp role ot fname Robert Emmett fname surname Bright surname subresp icontrib iiserial sertitle Architectural Digest sertitle date dateiso 19851200 December 1985 date vol volid 42 volid no issueno 12 issueno p pages 126 133 pages iiserial icitat Monograph chapter 50 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards PARKER TJ and HASWELL WD A text book of zoology 5th ed vol 1 Revised by Wd Lang London Macmillan 1930 Section 12 Phylum Mollusca p 663 782 icitat imonog author role nd surname PARKER surname fname T fnamel author and author role nd surname HASWELL surname fname WD fname authorl title language en A text book of zoologyl title edition 5 edition th ed vol vol
59. o VANCOUVER ISO ABNT and OTHER standards and strokel title vtitle vcontrib In vmonog lauthor role ed surname Laragh surname fname H fname author author role ed surname Brenner surname fname BM fname author editors vtitle title language en Hypertension title subtitle pathophysiology diagnosis and management subtitle vtitle edition 2 edition nd ed city New York city pubname Raven Press pubname date 1995 date P pages 465 78 pages vmonog vcitat Complete monograph Institute of Medicine US Looking at the future of the Medicaid program Washington The Institute 1992 vcitat vmonog corpauth orgdiv Institute of Medicine orgdiv orgnameJUS orgname corpauth vtitle title language en Looking at the future of the Medicaid program title vtitle city Washington city pubname The Institute pubname date 1992 date vmonog vcitat 2 Bibliographic references according to ISO 690 87 standard icitat Examples J ournal article LARSON J ulian R and TANNEHILL Robert S Problems in accessing scientific and technical serials Special Libraries J uly Aug 1977 vol 68 no 7 8 p 241 251 icitat icontrib author role nd surname LARSON surname fname ulian R fnamel authorland author role nd surname TANNEHILL surnamel fhame Robert S fnamel author title language en Problems in accessing scie
60. omac o title ocontrib Rio deJ aneiro 1969 confgrp Trab Apres Ao no II no confname Congresso regional sobre Documenta o confname and no IX no confname Reuni o da FID CLA confname date dateiso 19691128 28 a 29 nov 1969 date city Rio deJ aneiro city confgrp ocitat 5 Recomendations for markup and more examples e Punctuation The full stop of the abstract should be inserted within the tag abstract language The full stop should be within x citat The full stop of a title in the bibliographic reference should not be marked however and are part of the title and should be marked The expression et al is marked with no dot et al Jet al et al e Titles and subtitles Numeration and indications of parts should be marked within the subtitle Spermatozoa quality of cryopreserved canine semen II Effect of cooling procedures 59 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards titlegrp title language en Spermatozoa quality of cryopreserved canine semenl title subtitle II Effect of cooling procedures subtitle titlegrp e Abbreviations follwing names of the city are entered as state Examples Bras lia D F city Brasilia city state D F state Washington D C city Washington city state D C state e Acknowledgments should be marked within back whenever possible
61. on the button indicating the document type e Article it specifies the texts that are scientific articles It has keywords abstract and bibliographic references It is considered a scientific production in bibliometrics e Text it specifies the texts that are part of ajournal but not scientific articles such as editorial interview obituary reviews etc When the document type has been selected text or article the screen belowis shown and should be filled out with the following fields Markup and Parser Markup Markup DTD Scielo 3 0 q x Config Fields pii order pages D2 85 89 Acta Cir Bras v 19 n 5 y chile version doctopic E original article Acta Cir Bras I toccode __ wolid issueno r supplvol supplno A EN is Hl English Y 19 5 es sponsor dateiso issn status LE a hace ine ie s Not definido 20041000 0102 8650 1 O figure O graphic JE ccode fbpe bireme v OK seccode Original Articles v Cancel e Config Fields the name of the journal volume and number to be marked e Order the order of the document to be marked according to the summary of the journal e Pages initial and final page of the text or article according to the printed version If the page numbers are unknow
62. on and Update File Preparation Procedures Installing PC Programs Code Manager and Title Manager Markup and Parser Converter Local Site SciELO Processing Procedures CONAURWNER Table of contents Methodology document Set sssssssssssssnunnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnuuunnnnnnnnnnnnnnn nnana l Abbreviations used aii a IV How to use this Manuals as vil 44 0 E span addons ada s Di snes si Seia TE 1 LI ABOU BREMEN ESA AS EVE pg E TIE 1 1 2 The Virtual Health Library WHr 3 1 3 About the SciELO Methodology o a da 4 2 Introduction sssssssssnnnnnnnnnnnnnnnnnnnnuuunnnnnnnnnnnnnnnnnnnnnnnnnunnnnnnnnnnnnnn nnana 7 3 Markup O aora a ina a ASUS ae a nd da aa A 9 3 1 Requirements to initiate Markup 0oooocccccccccconnnncrnnn naco nana c carr 9 3 2 Using ENE Markup Program zaa2s salute A A A 2 10 3 2 1 CON QUEALION ASA DAA E 11 3 2 2 Markup DTD SciELO 3 1 allows initiating markup ssccecccseceeeerrrrererre 12 A A a AA A A A E AAA EAA E E KA ADE R E 15 A E VEE E E E E 15 LL A E E E E 16 3 2 2 4 OBM CMNT A A E eee a 17 4 Program buttons assa iris arde es A AA and 18 4 1 EMM A AA A A 18 4 2 Change tag A NE 19 4 3 Delete the LAO a rita NN nic 19 dd Automatic Marku Poenos e nE EEE EEEE ado 19 4 5 PGI aa EEE e A E e q E et 20 4 6 SAVE ir att A 21 5 Program A 22 6 a AO NO 24 7 BibIOGPAPNIC FETEFENCES foie cac inician siri anais dead rapa da nd 28 8 A asia scans ais ada is a a Ree a a 29 AppendbeA
63. on in charge of marking the references to confirm the tags that will be inserted during this process as shown below 74 Markup and Parser Appendix J Automatic Marking Automata Microsoft Word a04 20n2 els i gt 0a xilo ocitat 1 7 OAUTHOR ae SURNAME Sobrenome a Monteiro FNAME Nome El A M DATE Data 2001 TITLE Titulo Awancos no estudo da conjugalidade Os casais de dupla carreira OISERIAL Publica o Seriada ocitat ocontrib oauthor surname JMonteiro surname fame 4 M fname foauthor date 2001 date title Avan os no estudo da conjugalidade Os casais de dupla carreira ftitle focontrib oiserial sertitle Psicologia Ci ncia e Profissio sertitle volid 21 volid issueno 3 issueno pages 10 19 pages foiserial focitat a lt lt gt gt Markup Cancel ade nO Be md meffi 21 E el el de 1355 oO 4 Below is what the reference looks like after having been marked by the automaton E 3 a aff ign table figgrp locitatllocontriblloauthor role nd surname Monteirol surname fame A m fname oauthor date dateiso 20010000 2001 fdate title language pt Avan os no estudo da conjugalidade title subtitleJos casais de dupla carreira subtitle ocontrib oiserial sertitle Psicologia Ci ncia e Profiss o sertitle valid 22 volid issueno 3 issueno pages 10 19 pages foiserial foci
64. ormation centers etc aiming at the dissemination improvement and sustainability of the SciELO Model The operation of the SciELO Markup and Parser Preface network is highly based on national infrastructures which contributes to guarantee its future sustainability The successful development of the proposed SciELO network of Latin America and Caribbean scientific journals in the next years will contribute to make locally generated scientific information readily available which will ultimately contribute to increase the usage of scientific and technical information on decision making process at different levels 2 Introduction The program Markup is an interface created to enable text markup according to DTD SciELO 3 1 structure based on regulation ISO 8879 1986 SGML Standard Generalized Markup Language and ISO 12083 1994 Electronic Manuscript Preparation and Markup The program environment was tailored for exclusive use by module markup using MS WORD97 or MS WORD 2000 or MS WORD XP in English together with VBA Visual Basic for Application tools Basically its use requires handling the mouse to select texts to be marked up together with user interaction screens and tool bars buttons that represent the DTD Document Type Definition structure levels with its tags Thus the program provides automatic tag insertion classifying the texts based on their functionality according to DTD assuring logical integrity of markup
65. ory CA scielo Bin markup in the computer where you find Title to the same computer structure where markup will be performed Markup and Parser Markup 3 2Using the Markup program To open the program use menu Start in Windows Programs SciELO Markup J 5 Norton Antivirus 5 Online Services 2 Real 2 Code Manage A te tai E one LA WeZip gt DB2SGML g Help La Wise Instalher gt amp Markup q Run Le Ws_ttp gt amp SGML Parser intemnet Explorer 2 Title Manager uy Suspend E Microsoft Access 4 Uninstall KE Microsoft Binder Sei UpDate RP Sha Dom BE Microsoft Excel dla We Microsoft NetMeeting When Markup is selected the program uploads MS Word97 together with the template start dot creating the environment for application A tool bar buttons is displayed on the lower part of the screen Before initiating markup open a file in HTML format and click on Markup 10 Markup and Parser Markup Microsoft Word a04v20n3 Pk 2 5 xj F Ele Edt View Insert Format Tools Table Window Help ale xi Os SRY vaso POGGI Nema gt TmesNewRoman 12 BZD EE MMSE EE O F Morphological and biomechanical study of abdominal aorta of rats submitted to experimental chronic alcoholism Avaliac o morfol gica e biomec nica da aorta abdominal de ratos submetidos ao alcoolismo cr nico experimental Nereide Freire Cerqueira Winston Bonetti Yoshida S rgio Swain
66. p P s graduando I G C AND UNESP Rio Claro 63 Appendix H What should be checked after marking an article e Article or Text Tag Example of Text tag text pii nd doctopic le language en ccode br1 1 status 1 version 3 1 type nd order 13 seccode RSBMT150 sponsor nd stitle Rev Soc Bras Med Trop volid 35 issueno 3 dateiso 20020600 fpage 267 lpage 268 issn 0037 8682 toccode 1 LETTER TO THE EDITOR Example of Article tag article pii nd doctopic oa language pt ccode br1 1 status 1 version 3 1 type ilus map order 05 seccode RSBMT010 sponsor nd stitle Rev Soc Bras Med Trop volid 35 issueno 3 dateiso 20020600 fpage 227 Ipage 231 issn 0037 8682 ARTICLE Order check if the order the article appears in the summary is the same indicated in the tag article Pages check if the article pagination contains the initial and final pages If the page number page is smaller than 10 do not include a O before for example 1 18 Ifthe page numbers are unknown fill out as 0 0 If the initial and final pages are the same the field should be completed repeating the same number separated by a hyphen for example 10 10 If the page number is less than 10 do not include a O before for example 1 18 64 Markup and Parser Appendix H What should be checked after marking an article Doctopic check if the type of document original article letter editorial review article etc selected corresponds to the
67. polis SC Brazil October 1991 33 ocitat no 6 no ocontrib oauthor role nd sumame Maraschin surname fnamelM fnamel oauthor oauthor role nd sumame Queiroz surname fname FP fnamel oauthor date dateiso 19910000 1991 date title language pt Curva de crescimento de callus de Mandevilla velutina Proced ncia Cerrado title ocontrib In omonog title language pt Anais titleldo confgrp no ITI no confname Encontro de Bot nicos PR SC confnamel sponsor Universidade Federal de Santa Catarina sponsor city Florian polis city state SC state 58 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards country Brazil country date dateiso 19911000 October 1991 date confgrp pages133 pages omonog ocitat 59 Appendix G Examples of markup in affiliation aff Affiliation identification Mark the affiliation of students residents in memoriam researchers with scholarship visiting professors etc provided they belong to an institution The information on researchers with scholarship Master s degree and Ph D students should only be marked if followed by name of School University or Department In case of more than one institution and if it is not possible to distinguish which author is affiliated to which institution do not mark Mark as affiliation section laboratory servic
68. punctuation is used to indicate the separation and the are used for the character or set of characters that delimits where the tag should be inserted 02 03 NT oiserial after the indication of the part ocontrib this indicates the whole oiserial Now from state 2 02 to state 3 03 tags will be inserted within the main tag ocontrib ocl oc6 ocl oc1 NT oauthor ocl oc2 NT oauthor amp ocl oc3 NT oauthor amp oc2 0c3 NT oauthor amp oc3 0c4 T date o0c4 0c5 T title oc5 0c6 T subtitle 0c4 0c6 T title In the part relatingto the contribution there are six possible states This journal is different in that there are separators between authors amp or for the name of the article which are always between inverted commas in addition to the letter T which indicates a terminal element that is that no other tag will be inserted within it In the case of authors there will be the larger tag oauthor and those contained within it surname and fname oauthor oal 0a3 oal oa2 T surname oa2 0a3 NT fname oa2 0a3 NT fname amp oa2 0a3 NT fname amp 72 Markup and Parser Appendix J Automatic Marking Automata oiserial oil 015 oil oi2 NT sertitle 0i2 0i3 T volid oi3 014 T issueno 0i2 0i4 T volid 0i4 0i5 T pages fname f1 13 f1 3 T ign f1 f38 T ign amp f1 f2
69. reface decentralized network of information sources based on which it is possible to retrieve and extract information and knowledge to support health decision making processes The Virtual Health Library can be visualized as a distributed base of scientific and technical health knowledge that is saved organized and stored in electronic format in the countries of the Region universally accessible on the internet and compatible with international databases 1 3About the SciELO Methodology The access to adequate and up to date scientific and technical information is essential for the economic and social development specially to support decision making process in planning formulation and implementation of public policies and to support professional development and practice The results of scientific research are mainly communicated and validated through publication in scientific journals This is valid for developed and developing countries However scientific journals from developing countries face several distribution and dissemination barriers which limits the access and usage of locally generated scientific information SciELO Scientific Electronic Library Online is a model for cooperative electronic publishing of scientific journals on the Internet Especially conceived to meet the scientific communication needs of developing countries particularly Latin America and the Caribbean countries it provides an efficient way to assure unive
70. rs are read the machine s control shifts from one state to the other according to the set of transition rules specified for the automaton An automaton has been implemented for SciELO specifically to identify bibliographic references automatically How is this carried out e Firstly it is essential that the bibliographic references of scientific articles fully comply with the journal s standards e Secondly it is necessary to update or create entry files in the system The files located in C SciELO Bin markup used for this purpose are e automata mds This file includes the list of titles that may be marked in an automatic fashion 69 Markup and Parser Appendix J Automatic Marking Automata e sigla da revista amd acronym of journal amd This file includes the rules that enable the identification of states When creating or updating files prior to the automatic marking note that e The file with the list of journals that have automata is automata mds This file includes the following data abbreviated title of journal the standard used sigla da revista amd acronym of journal amd especificac o do arquivo da norma amd specification of the file of the standard amd E g Acta Bot Bras ocitat abb amd tgother amd Acta Bot Bras abbreviated title of magazine according to the title manager ocitat indicates that the ocitat tag is used in the bibliogrphic reference abb amd acronym of journal according to th
71. rsal visibility and accessibility to their scientific literature contributing to overcome the phenomena known as lost science In addition the SciELO model comprises integrated procedures for the measurement of usage and impact of scientific journals SciELO Model is product of a partnership among FAPESP the State of S o Paulo Science Foundation lt http www fapesp br gt BIREME the Latin America and Caribbean Center on Health Sciences Information lt http www bireme br gt as well as national and international institutions related to scientific communication Markup and Parser Preface and editors A pilot project involving 10 Brazilian journals from different subject areas was successfully carried out from March 1997 to May 1998 aimed at the development and evaluation of an adequate methodology for electronic publishing on the Internet From J une 1998 the project begins to operate regularly incorporating progressively new journal titles and expanding its operation to other countries Since 2002 the Project is also supported by CNPq Conselho Nacional de Desenvolvimento Cient fico e Tecnol gico lt http www cnpg br gt The SciELO Model comprises three components The model s first component is the SciELO Methodology which enables the electronic publication of complete editions of scientific journals the organization of searchable bibliographical and full text databases the preservation of electronic arch
72. so deal with a scientific paper the current status of a certain scientific investigation and its developments update Article containing up to date information of interest to the medical science or science in general 44 Markup and Parser O m Appendix D Types of Document If the first time you use the Markup an error message appears indicating that the Microsoft Word executable file has not been found check where it is installed in your equipment Replace the default address c program files microsoft offica office winword exe for the correct one in your installation Before using the Word XP for marking you will have to reduce the macro security level Select the option low under Tools gt Macro gt Security gt Security Level in your Word software 45 Appendix E Guide to identify bibliographic references and their elements in Program Markup Journal articles Part analytical matter xcontrib xiserial Book chapters Analytical matter in xcontrib xomonog Matter analytical xmonog xcontrib Books Matter xmonog Papers in congresses Part matter annals xcontrib xmonog confgrp Part matter not published xcontrib xconfgrp Projects Part matter xcontrib xmonog report 46 Markup and Parser Appendix E Guide to identify bibliographic references and their elements in Program Markup Matter xmonog report 6 Series monographs Matter
73. surname author and author role nd rid a02 fhname Frederico Henriquel fname surname Melo surname author authgrp A 20 years old man cameto the outpatient clinic infectious disease branch with a 6 month hystory of ulceration on the right foot He also complained of local pain and uneasy gait He did not smoke denied alcohol abuse the use of illicit drugs diabetes mellitus the use of chronic prescribed drugs or the presence of immunosupressive diseases On 3 occasions he was seen by different physicians and was treated with oral antibiotics and local creams without improvement During clinical examination he appeared healthy A shallow ulceration with clearly defined borders on the right foot was described Figure A note the yellowish and dry aspect of the base of the ulcer which is surrounded by reddish well defined limits Physical examination did not reveal significant alterations except for the presence of an indurated spleen palpable 4 cm below the left costal margin Abdominal ultrasound confirmed the increased size of the spleen without any singularity normal liver texture was described and no intra abdominal lymph nodes were 41 Markup and Parser Appendix C Text marked according to DTD SciELO 3 1 reported Chest x ray resulted normal Stool examination revealed the presence of viable eggs of Schistosoma mansoni The x ray of the right foot showed alterations compatible with osteomyelitis Figure B note the irregul
74. surname Hemenz surname fname J W fname oauthor oauthor role nd surname Walsh surname fname T fname oauthor title language en Lipid formulations of amphotericin B title subtitle recent progress and future directions subtitle ocontrib oiserial stitle Clin Inf Dis stitle date dateiso 19960000 1996 date volid 22 volid issueno 2 issueno pages 133 44 pages oiserial ocitat ocitat no 6 no ocontrib oauthor role nd surname Graybill surname fname J R fname oauthor title language en Lipid formulations for amphotericin B title subtitle Does the emperor need new clothes subtitle ocontrib oiserial stitle Ann Intern Med stitle date dateiso 19960000 1996 date volid 124 volid issueno 10 issueno pages 921 3 pages oiserial ocitat other back article 40 Appendix C Text marked according to DTD SciELO 3 1 text pii nd doctopic cr language pt ccode br1 1 status 1 version 3 1 type ilus order 15 seccode RSBMT260 sponsor nd stitle Rev Soc Bras Med Trop volid 35 issueno 3 dateiso 20020600 fpage 271 lpage 272 issn 0037 8682 toccode 1 IMAGENS EM DIP titlegrp title language n Osteomyelitis by Paracoccidioides brasiliensis ic authgrp author role nd rid a01 fname J os Roberto fname surname Lambertucci surname author author role nd rid a01 fname ean S vio fname surname Botelho
75. t in menu Parser and the system will perform verification A message appears on the screen in case of no errors Therefore the use of Parser is concluded and you can exit the program If there are errors Parser will indicate the DTD line and the type of error that has occurred In this case it is necessary to go back to program Markup and check if markup is correct An example of error where the tag AUTHOR was not correctly inserted 26 Markup and Parser SGML Parser N No Errors Detected Parser 27 7 Bibliographic references PACKER Abel Laerte SciELO metodolog a para la preparaci n almacenamiento diseminaci n y evaluaci n de revistas cient ficas electr nicas In Congreso Regional de Informaci n en Ciencias de la Salud 4 online San J os 1998 Available from internet lt http www bireme br cgi bin crics4w textO id crics4 mr3 co3 gt PACKER Abel Laerte et al SciELO uma metodologia para publicac o eletr nica Ci ncia da Informac o online 1998 v 27 n 2 cited 2005 Set 21 Available from http www scielo br scielo php script sci arttext amp pid S0100 19651998000200002 amp tIng enSdng en amp nrm iso ISSN 0100 1965 28 8 Glossary Affiliation Institution to which the author belongs or to which he she is subordinated Analytical Part of a document such as the article of a periodical or the chapter of a book Application Program used to execute tasks in con
76. tal en medicamentos el gasto por prescripci n innecesaria fue de 1 720 327 pesetas CONCLUSIONES La evaluaci n retrospectiva ha mostrado que existe un elevado porcentaje de tratamientos que no se adecuan a lo recomendado en las normas de prescripci n La puesta en marcha de intervenciones informativas permitir a realizar una selecci n m s eficiente de la anfotericina B noC mejorando la calidad de la prescripci n lo que podr a suponer un importante ahorro econ mico abstract Palabras clave keygrp scheme nd keyword type m language es Anfotericina B keyword keyword type m language es Infecciones f ngicas keyword keyword type m language es Estudio de utilizaci n de medicamentos keyword keygrp ABSTRACT title language en Utilisation of non conventional amphotericin B in the San Carlos Clinical Hospital title abstract language en BACKGROUND Amphotericin B is the treatment of choice for systemic fungal infections however its clinical usefulness is limited by its toxicity The lipid formulations appear to be equally effective and safer but are more costly The increase in the consumption of and expenditure on these formulas led us to undertake a study in order to identify their profile of use quantitative and qualitative and to assess the financial repercussions when used inappropriately METHODS A set of rules were developed for the use of amphotericin B and the quality of the prescription of non convent
77. tat If the structure does not match the description given in the files mentioned before the program will showthe following message 75 Markup and Parser Appendix J Automatic Marking Automata it Microsoft Word a04w20n2 411 08 e Assuntos Comunit rios p 46 Bauru UNESP imo Em VEL i S le 4 S Re Ss Marca o Autom tica X N o foi possivel reconhecer a estrutura da refer ncia Souza RM 1994 Tese de Doutorado sua familia This B 1987 O Yizzotto M M 1994 Psicodin mica da paternidade um estudo sobre homens que esperam o nascimento de seu filho Tese de Doutorado Universidade Estadual de Campinas Campinas other s oauthor ocorpaut et al title subtitle date pages Page 34 Sec 1 si at Ln Col 1 Rec TAK xro OVR it FA ox Pstart H e 2 O 2 o E ella Bar E a a RE 13 07 The structure of the reference cannot be recognized If the journal doesn t have an automaton the following message will be shown Marca o Autom tica El x Esta revista n o possui marca o autom tica No automatic marking available for this journal 76
78. this button The program will ask you to confirm deletion 4 4 Automatic Markup In order to activate automatic markup the operator should select the bibliographic reference with the cursor and click on the button The program will Markup and Parser Program buttons display the markup option and the operator should select the most appropriate option It is necessary to develop a specific automata for the standard used by the journal to use this option This tool enables automatic acknowledgement of the elements of a bibliographic reference focitat ino 4tino ERRAR language en M dateiso 19990 ocitat no 5 no role nd sumam ootat lino J5L no J ocontrib oauthor surname Bas go sumame fname De Mame L osuthor lloauthor surname Koch sumame fname M4 frame Jl oauthor tttie Formas de do c ncer gauchal stitle ign onto Es este andy ae Naste Soldate voi O 8 void pages 64 71 pages oiseral octat ocitat noJ no language en M detec o precoce i de Janeirof cityHo 007 1999 date f thesis omonag focitat E ocitat no 8 no ocontrib loauthor role nd sumame Bergl surname fname TW mame oauthor title 4 5Help not available yet 20 Markup and Parser Program buttons 4 6Save a It saves the file being marked 21 3 Program error messages To avoid errors and guide the users during markup the program shows some messages if the previously describe
79. tions are correct using the menu Configuration The options Add ignore markup to document and Add SGML declaration to document should be selected If the document is an article File Containing the DTD C SCIELO BIN SGMLPARS article3 1 dtd and Document Type Name article should be selected In case of a text follow the procedure described above changing article 3 Ldtd for text 3 Ldtd and Document Type Name for text according to the image below e MADEL PROC acredito R GI a Fie Pane Coigusto Hels article piiend doctopic 0a language pt ccode bri i status version 3 1 type tab order 01 seccode nd sponsor nd stitle Arq Bras Med Vet Zootec volad 53 issueno 6 dateiso 20011200 fpage 635 Ipages640 issn 0102 0935 front titlegrp title language pt Detecc o da infec o pelo v rus da artrite encefalite caprina imunodifus o en gar e rea o em cadeia da polimerase com primers degenerados title lt 091 title lenguage en Detection of caprine arthritis encephalitis virus infection agar gel immunodiffusion and polymerase chain reaction with degenerated primers titie lt 093 titlegrp autherp surhor role nd framejI K fneme surnane Putkoski surmeme suthorj1 author role nd tide a02 fnene R fname surname JWerenice surname author 2 author role nd frane D fname surname JReischak surnane autho surname Wendelstein surnane au surname
80. tivo de las variables de inter s Adem s se cuantific el gasto derivado de la prescripci n de la AB noC as como la repercusi n econ mica del exceso de gasto producido como consecuencia del uso incorrecto de la AB Se consider incorrecta cualquier indicaci n no reconocida como tal en la literatura biom dica o no incluida en las Normas de Uso consensuadas y cualquier tratamiento en el que se prescribi una AB estando recomendada otra por ej la ABM estando recomendada la ABL o la ABC RESULTADOS Evaluaci n cualitativa y cuantitativa de la prescripci n de AB noC El an lisis descriptivo muestra que se prescribieron un total de 245 tratamientos con AB noC en el 53 se utiliz ABL y en el 47 ABM Del total 184 tratamientos el 75 fueron prescritos por los Servicios de Hematolog a y Oncolog a tabla 2 En la tabla 5 se muestra el exceso de gasto derivado de la prescripci n incorrecta de AB noC casi 42 millones y medio de pesetas que representan un 35 del gasto total en esta medicaci n 120 millones en el periodo de estudio El 88 del exceso de gasto 37 millones se debe a la selecci n inadecuada de ABM en pacientes que podr an haber sido manejados con ABL o ABC y el 12 5 millones a la selecci n de ABL en pacientes que no requer an ninguna anfotericina aqu incluimos el debatido uso profil ctico en pacientes neutrop nicos o que podr an haber sido manejados con ABC El exceso de gasto producido por la prescripci
81. tura no Brasil In COUTINHO Afr nio org A literatura no Brasil Rio deJ aneiro Ed Sul Americana 1955 V 1 t 1 p 20 53 acitat acontrib author role nd surname AZEVEDO surname fname Fernando de fname author title language pt A escola and a literatura no Brasil title acontrib In amonog author role org surname COUTINHO surname fname Afranio fname author org title language pt A literatura no Brasil title city Rio de J aneiro city pubname Ed Sul Americanal pubname date dateiso 19550000 1955 date V volid 1 volid t tome 1 tomel p pages 120 53 pages amonog acitat Complete monograph BANCO NACIONAL DE HABITA O Plano Nacional de Habita o Rio de Janeiro 1996 2v acitat amonogl corpauth orgname BANCO NACIONAL DE HABITA O orgnamel corpauth title language pt Plano Nacional de Habita o title city Rio deJ aneiro city date dateiso 19960000 1996 date extent 2v extent amonog acitat Complete annals CONGRESSO BRASILEIRO DE CR TICA AND HIST RIA LITER RIA 2 jul ago 1961 S o Paulo Anais S o Paulo Fac Filos Ci ncias and Letras 1961 666p acitat amonog confgrp confname CONGRESSO BRASILEIRO DE CRITICA AND HISTORIA LITERARIA confname no 2 no date dateiso 19610 700 jul ago 1961 date city S o Paulo city confgrp title language pt Anais title city S o Paulo
82. ty date dateiso 19910000 19911 date omonog ocitat Levy Ren Dominique oye Tous gaux Dela Startification aux Repr senations Zurique Editions Seismo ocitat omonog oauthor role nd surname Levy surname fhame Rendl fnhame oauthor oauthor role nd fname Dominiquel fname surnamel oyel surname oauthor title language fr Tous Egaux title subtitle De la Startification aux Repr senations subtitle city Zuriquel city Editions pubname Seismo pubname omonog ocitat 5 Bkaily G Orleans PD Calixto J B amp Yunes RA 1998 Patent No CG 70857 228 Specific steady state R type Ca channel blockers and used thereof Canada September 1998 ocitat no 5 no omonog oauthor role nd surname Bkaily surname fname G fname oauthor oauthor role nd surname Orleans surname fname PD fname oauthor oauthor role nd surname Calixto surname fname B fname oauthor amp oauthor role nd surname Yunes surname fhame RA fname oauthor 1998 title language en Patent No CG 70857 228 title subtitle Specific steady state R type Ca2 channel blockers and used thereof subtitle country Canadal country date dateiso 19980900 September 1998 date omonog ocitat 27 Porter NR 1983 Euglobulin clot lysis time European Concerted Action of Thrombosis and Disabilities Assay Procedures ECAT Manual No 2 ocitat no 27
83. ty 1955 p 405 406 Memoirs Series 2 ocitat omonog oauthor role nd surname PRITCHARD surname fname A AND fnamel oauthor oauthor role nd surname BAKER surname fname AND W fname oauthor title language en A revision of the spider mite family Tetranychidae title city San Franciscof city pubname Pacific Coast Entomological Society pubname date dateiso 19550000 1955 date p pages 405 406 pages coltitle Memoirs Series coltitle volid 2 volid omonog ocitat Complete annals COELHO AND F OLIVEIRA F C VASCONCELOS L F L Comparac o de m todos de obtenc o de imagens digitais de ra zes In CONGRESSO BRASILEIRO DE ENGENHARIA AGR COLA 28 1999 Pelotas Anais Pelotas Sociedade Brasileira de Engenharia Agr cola UFPel 1999 1 CD ROM ocitat ocontrib oauthor role nd surname COELHO surname fname AND F fname oauthor oauthor role nd surname OLIVEIRA surname fname F C fname oauthor oauthor role nd surname VASCONCELOS surname fnamelL F L fnamel oauthor title language pt Comparac o de m todos de obten o de 54 Markup and Parser Appendix F Examples of references marked according to VANCOUVER ISO ABNT and OTHER standards imagens digitais de raizes title ocontrib In omonog confgrp confhame CONGRESSO BRASILEIRO DE ENGENHARIA AGR COLA confname no 28 no date dateiso 19990000 1
84. used in the 3 1 version of the DTD table table it contains the attribute number no to identify the number of the table in the text as well as the elements title model m title and legend legend figgrp figure group it has the attributes number no to identify the number of the figure in the text and it comprises the elements title model m title figure reference figref and legend legend Markup 17 4 Program buttons On thetop left corner of the screen there are six program buttons ISTO They are 4 1Exit markup Upon conclusion of markup or to exit the program at any time click on this button and the following screen will be displayed 18 Markup and Parser Program buttons Markup DTD Scielo 3 0 S x m Finish Markup PAP Save on TXT format and use the Parser r Save on TXT format and use the Parser after Exit without to save on TXT format E Choose one of the options Save the file as TXT and use Parser Save as TXT and use Parser later or Exit and do not save as TXT The first option automatically activates Parser which will check markup 4 2 Change tag attribute y To use this option select the tag that has the attributes to be changed and click on the button shown above The screen with the attributes will automatically open in order to make the appropriate alterations 4 3Delete the tag T To use this button select the initial tag to be deleted and activate
85. y about issues of scientific relevance which are of interest to the scientific community or to society interview A talk with an individual about his her background and other personal and professional information his her opinion on specific issues raised by the interviewer etc letters Communication between people or institutions and organizations through the exchange of letters methodology Identifies the methods or procedures and includes a description Of a research project selection criteria the description of the groups investigated the methods relating to each stage of the research teams procedures medication used etc ethics and statistical analysis note Reports on the partial or preliminary results of an empirical research project original article Includes new research clinical or surgical experiments or other original contribution point of view The author s opinion on specific aspects of a certain issue especially the controversial ones Whenever possible the point of view should be based on the author s experience as expressed in the available literature review An article based on material previously published on a theme It may be extensive as regards the complexity and the timeframe during which the material has been investigated review Critical analysis of books and other monographs technical report A report that details a research project or the solution to a scientific problem It may al

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