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1.                                                                                                                                                                                                                                                                                                                                                                                                                                                                       IRAFNAME     1981115   520      INSTRUME    MIRAC3  Mid IR Array Camera      INSTRUMENT                   713 31 34 74      START TIME OF OBSERVATION  UT                    713 32 22 14      END TIME OF OBSERVATION  UT   OBJECT      uy aurigae      DATE OBS     15 11 98      DATE OF OBSERVATION  UT   DD MM YY  TELESCOP   IRTF    RA   7 294999999829   01   RIGHT ASCENSION  DEGREES    DEC   3 078666666396e 01   DECLINATION  DEGREES    EQUINOX   1 950000000000e 03   EQUINOX FOR RA AND DEC  LAMBDA   1 030000021274e 05   WAVELENGTH  METERS    FILTER1   3 000000000000e 00   POSITION OF FILTER WHEEL 1  FILTER2   1 000000000000e 00   POSITION OF FILTER WHEEL 2  FILTER3   1 000000000000e 00   POSITION OF FILTER WHEEL 3  OBSERVAT     Mauna Kea      LOCATION OF OBSERVATION  SOFTVER   7 150000095367e 00   VERSION NUMBER FOR MIRAC SOFTWARE  CHOPFREQ  2 89723849296     00   CHOP FREQUENCY  HZ    FRAMETIM  1 966079883277e 02   FRAME TIME  SEC    ITIME x 8 493465423584e 00   INTEGRATION TIME  SEC  IN EACH BEAM  NODWAITT  3 000000000000e 00   BEAM
2.                                                                                                                                                                                                                                                                                                                                    FRPERCOI  8   FRAMES PER COIMAGE   CHOPWTFR  0   CHOPPER WAIT FRAMES   CHOPWAIT  1 529173278809e 01   CHOP WAIT TIME  MSEC    NUMCHOPS  0   NUMBER OF CHOP CYCLES   SKYFLUX   2 351335205078e 03   SKY FLUX  AVG CNTS OFF SRC   SKYRMS   1 729015469551   00   RMS OF LAST 5 SKY FLUXES   SKYDIF   3 094238281250e 00   DIFFERENCE FROM LAST SKY FLUX                   1 745402693748e 00   AMBIENT TEMP  C                2   1 446844005585e 01   TEMP INSIDE CAMERA ELEC   C   ERTEMP3   2 673849105835e 01   TEMP OF A D COMPONENT  C   AIRMASS   1 128493309021   00   AIRMASS OF OBSERVATION  RAOFFSET  0 000000000000e 00   RA OFFSET  ARCSEC    DEOFFSET  0 000000000000   00   DEC OFFSET  ARCSEC    FILEDIR    e Nd981115    BAKUPDIR     4  d981115          15      5  9132   FILTER   1 STEP POS   FW2STPOS  0   FILTER   2 STEP POS   FW3STPOS  0   FILTER W3 STEP POS   PUPILPOS  2   PUPIL POSITION   2     35  COMMENT THE ORIENTST SHOWS THE ORIGINAL ORIENTATION OF THE DATA  ORIENTST   ULNYY    DBLREAD   0   DOUBLE READ FLAG  O FALSE  WAITCYCL  14   CHOPPER WAIT CYCLES   BURSTCYC  17   BURST DELAY CYCLES   SUBROWST  0   SUBARRAY ROW STAR   SUBROWND  3   SUBARRAY ROW END   SUBCOLST  0   
3.                                                                                                                   1               p Color of Arcsec Grid    FWHM Display Mode FWHM displ A  Black  Small display limit 0 B  Blue  Large display limit 5 C  Green  Number for running AVG 5               Display On Off On     Red           Magenta      Brown                   Display Mode            LtGray      DkGray  FWHM Display J  LtBlue  Sum of Source K  LtGreen  Peak Value    LtCyan  Display Sky Flux M  LtRed      N  LtMagenta  O  Yellow                   Arcsec Grid       White  Arcsec Grid lines On    Grid Spacing  arcsec  5    Color of Arcsec Grid Black      12 2 2 DISP  Load  MOS Display              Current     Data Format MIRAC     Auto Gain  Mask  FField   gt      Load display buffer    F Mod 3  Accumulate  Mosaic  Spectra                    Format       Current      Noise  MIRAC    Processed  FITS    Operation  ASCII    Replay                J L    F Mask Array     p  Auto Gain  Mask  FField    Edit Mask  Save Mask image o bad1106 msk  Mask Auto o hilll4 msk Read Mask image   o bad1106 msk  Gain Auto OFF Output bad pixel list  FField Auto OFF Import pad           RISE     i   Disregard low points using map  Dynamic  Masking QET Cutoff high points using map  Edit Mask Array mio Mask Reset  Clear masked pixels                       154 MIRAC User s Manual             F S Set  C Clear  M Move  E Exit                                        Mosaic functions         5 p Select
4.                                  61  Figure 9 2 Pull down Menu for Next Observing                                                65  Figure 9 3 Sky Modulation in the Chop Data Taking Mode                            69  Figure 9 4 Sky Modulation in the Chop Nod Data Taking Mode                        69  Figure 9 5 Sky Modulation with source in all four Chop Nod Beams                     70  Figure 11 1 Grayscale Display Mode                                              84  Figure 11 2 Contour Display Mode                                                85  Figure 11 3 The Slice Display Mode                                              86  Figure 11 4 Histogram Display   i  eR               RENE EXE MSN M DAR 87  Figure 11 5 Radial Plot of Simulated Star with Gaussian Fit to Profile                    88  Figure 12 1 Scope Utility Display  sss Seer a A REIR EAR ARA EA SA 93  Figure A3 1 Plot of MIRAC3 N band filter and atmospheric transmission                 115  Figure A3 2 Plot of MIRAC3 Q band filter and atmospheric transmission                 116  Figure A3 3 CVF Calibration July 9  1994 and May 24  1995                         118  Figure   14 1 Cryostat Vacuum                                                          180  Figure AT4 2 Cryostat Cooldown 2  cede eges he oe ee                             181  Figure   14 3 MIRAC Control Room Layout                                      184  Figure Al4 4 MIRAC PC Connector Positions                                     185  Fi
5.                      145    A12 1 OBS  Command Line Menus                                       145    5 23 99 Contents       AI2 2  DISP  Command Line Menus                                       152     12 3 UTIL  Command Line                                                158     12 4 PRN  Command Line Menus                                       162  Appendix 13  Shipping Procedures and Shipping Inventory                           163  A131 Shipping Procedures  y s Sm qoc ks Ra ats         SIA RR        RUN 163   A13 2 Shipping Crate List                               164   A13 3 Shipping Labels for          and UKIRT                                165   A13 4 Shipping Inventory and Packing                                     166  Appendix 14  Hardware Preparation and                                               179    14 1 Observatory Preparation Requirements                                179   ATT2  Unpaeking   e bi tcv                                            ev      179           Cryostat Preparations        pcr RYE S ER RR REY p 179  A14 3 1 Protection of Detector and                                          179     14 3 2 Cryostat Vacuum                                                  179   A14 3 3 Liquid Nitrogen Cool                                         180     14 3 4 Liquid Helium Cool                                           181     14 3 5 Topping Off Liquid Helium Reservoir                         182     14 3 6 Cryogen Transfer at the Telescope         
6.                    182   A14 3 7 Measuring Cryogen                                           182     14 3 8 Cryogen Capacity  Hold Time  and Consumption                 182   A14 4 Control Room Setup 5 qed teeter                  EA 183     14 5 Camera Installation at Telescope                                    185   A14 6 Cabling and Connections                                          187     14 7 Temperature Monitor and Controller                                 192     14 8 Setting the LN  Shield shutter  Pupil Stop  and Magnification               194     14 9 TV Relay Optics Pupil Setting                                      195               Telescope Balance                        eee See               196    14 11 Dichroic Alignment                                             196  A14 11 1 Dichroic Alignment using Pupil Imaging Lens                   196     14 11 2 Dichroic Alignment using Sky Dome Contrast                  197     14 12 Setting the Telescope Chopper Parameters                            198    14 13 Checking the Telescope Collimation                                 199    14 14 Setting the Telescope Nod Parameters                               200  Appendix 15  MIRAC Cryogen      Instructions                                    203  Appendix 16  Checking and Trouble Shooting                                     205  A16 1 Software or Digital Logic Lockup in PC  DSP  or Camera                205    16 2              Power Supply                      
7.                    9   Zid Telescopeand Sky Emissivity                                gutture 11   3  Observing Run Arrangements                                                 13  3 1 Observing Proposals                                           58      13   3 2 Observatory                                                                   14   3 2 1 Kitt Peak Arrangements                                       14   3 2 2 Mt Hopkins Arrangements                                     14   3 2 3 Hawaii Mauna Kea Arrangements                                14            Requirements List    eos              Sees OVE he eed See eee EV 15   3 4 Cryogenics COS                      S 19           17   4  Software Preparation       ed pn RACK Daa          DEMARIS Shae acea erre de oss 19  4 1 Object Lists and Air Mass Charts                                       19   4 2 Offset and Command Files                                            19   4 3 Establishing an Individual Guest Account                                 20   5  Start and End of Run Setup and Shutdown Check Lists                              21  5 1 Preparation of MIRAC after Shipping or Storage                           21   5 2 Start of Run Setup Tasks  a 53 toos fu eset tor sut see i pa a v bl ct ao 21   5 3 End of Run Shutdown Tasks i    cede ade ee Dba pede epee ee P Au ers 26   5 3 1 Initial Control Room End of Run Tasks                           26   5 3 2 Telescope Chamber End of Run Tasks                          
8.                   104   A1 3 Obtaining a Gain        co esu      cules ees                               105     1 4 Calibration of IR                                                            105  Appendix 2 Standard Mid IR Stars                                              107  A2 1 Standard Star Tables                                              107   A2 2 Notes on Standard Stars                                      herded du 111  Appendix 3     MIRAG Filters cue d                       Eris RETI AP dog eh es 115          PIOS               en ME E 115   29 2 CVF CAlDEaDOD             Sete    Xu                 Sco tbe hl aoe 116  Appendix 4  The OBSLIST Program                                            119  Appendix 5  The AIRMASS                                                          123  Appendix  Mantal Eog    511 ls       E Lowest era E Lees 125  Appendix 7  The mrc2fts Program                                              131  Appendix 8  Atmospheric Extinction and the aircor Program                          133  A8 1 Infrared Atmospheric Extinction                                      133   48 2 The aircor Program  2 252499 ERREUR                EEG 134  Appendix 9  MIRAC Image and Header File                                            135  Appendix 10  Reduction of MIRAC Data using                                        137  Appendix 11  Files Necessary for MIRAC Program                                 143  Appendix 12  Command Line Menus                       
9.                 218  Table A17 6 Array Resistance Temperature Sensor Calibration                         218     Table ANT  7 Clock IMputs 2             doo sut                     san Lacu beat  dpa      2 9  Table A17 8 Filter Wheel S witches  4    uns ox Sas eon             Pee d has oes 219  Table A17 9 Temperature Control                                              220  Table A1710 Preamp                         ERE XS REESE Mor                Sr tae 220  Table A17 11 Digital and Signal Ground Shorting Connectors                         220  Table A18 1 Power Supply Voltage and                                                221  Table A18 2 Power Supply Ratings                                             222    Table A18 3 Power Supply Power Dissipation                                     222    5 23 99 1  Organization of MIRAC Manual 1    1  Organization of MIRAC User   s Manual    The MIRAC User   s Manual provides information and check lists for shipping  setup  preparation   observation  data reduction and maintenance  The filled circle       indicates chapters most useful to  review before an observing run  This manual and other information about MIRAC can be obtained  from the MIRAC home page on the World Wide Web  Section 2 1      Subject Chapters Appendices  Organization of the manual and performance of MIRAC    1 2   Preparation for an observing run e 3 4    Al   A4  Setting up and shutting down for a run and for a night of observing 5 6   Observing with the ca
10.                 228  Appendix 21  Tape                                                                235   A21 1 Backing up Data with NovaTar on MIRAC PC DAT Drive                235     21 2 Backing up Data with NovaBack on MIRAC PC DAT Drive               235   A21 3 Backing up Data on a Unix                                               236   A21 3 1 Basic Unix Tar               8                                 236  A21 3 2 Steward Observatory Tar                                         237  Appendix 22  Weather and Tau Information from the Web                            239   A22 1 Arizona Weather Information                                       239   A222  Mt Graham Tau Meter Data                                        239   A22 3 Mauna Kea Weather Information from University of Hawaii                239   A22 4 Mauna Kea Weather Information from the Gemini Home Page             239   A22 5 UKIRT Weather Information for Mauna                                  239   A22 6 CSO Tau Meter Data for Mauna Kea                                 239  Appendix 23  Observatory Addresses and Telephone Numbers                         241  Appendix 24  MIRAC Addresses and Telephone Numbers                            243    5 23 99 Contents vii    List of Figures  Figure 2 1 Relative spectral quantum efficiency of the Boeing Si As BIB detector            4  Figure 2 2 Drawing of MIR AC3 cryostat    oi cen vic b eve ge REIR ORE ER r   5  Figure 9 1 The MIRAC Main Screen  OBS Command    
11.          UNDA 89  quit 31  35  56  80  100  145  152  158  162    229  R A         19  74  96  120  136  196  200                2                         ceret 89  157  replay    61  64  72  75  80  154    row 50  82  83  85  86  102  136  147  148   151  159  207 209    RS 232          67  72  73  191  192  200  SIN          Ne  Sh 104  105  133  scope   12  93  94  144  158  161  194  197    199    setup 1  14 16  19  21  22  28  30  31  33  36   49  84  88  89  93  116  117  125    127  154 157  161  170  179  183    188  223  228   shell 32  42  44  96  119  123  150  158  231  shift     81 91  95  104  118  207  210  220  shipping 1  13  15  17  21  30  163 166  177    shorthand notation          60  65  80  81  simulate data                    59  94  sky emission                      103  SHEE a                   79  85  86  88  155  smooth       ee         97  159  226    source 6  9 11  19  32  34  39  40  42  43  47   49  50  54  55  61 63  66  68 71  74    76  78 82  87  95  97  99  101 107    113  114  116 120  122  123  125    133  136  143 145  147  152 154    159  173  181  198 200  207  208    210  228 230  239   source list              34  119  120  123  standard star   9  40  42  43  46  50  55  56   105 107  111  114  119  123  133    201   step 47 49  74  75  82  90  99  116 118  136   195  196  198  200  201  206   Steward Observatory 1  3  4  10  11  13  14   17  21  22  31  49  119  121  123    164  165  200  237  239  241  243   subtract           70
12.        Value displayed 10 000     IB  Min Value displayed 0 000          Auto gray max level On         Auto gray min level On                  Printer Setup           4         5  1       Printer         Select Printer PostScript Previous page   Resolution Max resolution A  PostScript   gt   Orientation of plot Landscape     PostScript   CMYK   gt   Horizontal size 8 000     BostScript   Color   gt   Vertical size 7 000 D  Raw Image   gt   Destination Disk File E oshiba P321   gt   Filename for Output MRCGRAPH F  Toshiba P321SL   gt           Toshiba P341   gt        Toshiba P341SL   gt   I  Toshiba P351   gt   p      Resolution       J  Toshiba P3515L   gt     Next page   A  60 x 72 dpi       B  72 x 72 dpi     C  120 x 72 dpi     D  240 x 72 dpi                                                            5 22 99   12 2  DISP  Command Line Menus 157      Orientation of plot      F           Portrait      Landscape    p  IL                Nowhere  LPT1   LPT2   LPT3   COM1   COM2   COM3   COM4   Disk File                                                       For Other Plot Modes           Setup Same as DISP  Begin Contour Parameters Plot Params Edit  Redraw    Values   Level   Hardco    Graph print   Output    ASCII file   Fit   Exit       158    MIRAC User s Manual    A12 3 UTIL  Command Line Menus    UTIL  Functi Arith Macro Temp Scope Camera OBS DISP PRN Quit    A12 3 1 UTIL  Functi             F Function       System Info   Output ASCII files  FITS file output  Gain Map c
13.      Turn on camera electronics switch  Additional green LED lights should come on immediately   In 1 3 seconds  a relay should click  the red LED light should come on  the green LEDs  SHOULD NOT DIM  and the fans in the power supply should come on  The DetTemp on the  Monitor status display should rise and stabilize at 5 3 K  If any of the green lights dim  turn  off the electronics power and begin trouble shooting           The orange LED lights  Command Link on the PC panel and Data Link on the camera connector  panel  should come on  indicating that the fiber optic communications are operating     ol    34    13     14     15     16     17     MIRAC User   s Manual    The temperature monitor switch must be on for the camera electronics switch to cause the  camera power to turn on  Ifthe AC power to the camera is interrupted and restored  the camera  power will not come on until the camera electronics switch is recycled off and on     Initialize Camera    Obs  Init IO init yes   Obs  Init Camera init yes  NOTE  If the filter controller is not connected or powered  this will result      a long timeout  when the program tries to command the filter motor to a quiescent state  Instead use  UTIL  Camera Init     The I O init command initializes flags in the PC DSP interface  The Camera Init command  sends a master reset and all the camera parameters to the camera electronics  If the camera  parameters are later changed using the OBS  HEADER menu  the changed parameters are  aut
14.      te ooi oe 205   A16 3 Fiber Optic Command and Data                                          205         Biases and Clocks      oh wd o ror term S er teer a Ra e RU 205     16 5 Running the Camera without the                                             206      16 6 Running with the Array at Room Temperature                          207         MIRAC User s Manual    Alo  7 Array Operation  lt  lt                            REIR R RE LAE EA RR LU 207  Appendix 17  Cryostat Inputs and Outputs                                        213  Appendix 18  Power Supply Voltage  Current  and Power                            221  Appendix 19  Cryostat Disassembly and Assembly                                  223     19 1 Basic cryostat disassembly                                         223   A19 2 Removing the optics and filter wheel assembly                          224   A19 3 Removal of detector stage assembly                                  225     19 4 Removal filter wheels and filters                                     225   A19 5 Removing the upper section of LN2 radiation shield                      225   A19 6 Removing the upper section of LHe radiation shield                      225     19 7 Reassembling Cryostat 52 52        3G mE UOS exce ea ae be pe des 226  Appendix 20  VMS  DOS  UNIX Command Reference                              227   A20 1 Command Cross Reference Guide                                   227   A20 2 SunOS Quick Reference                           
15.     1 8   1 4     8 4   1 3   1 9   3 45   3 2     4 8   4 3   1 7   1 8     0 82     0 2   4 8     2 12     3 08     1 34     1 23     1 35     3 16     2 51    801    Tenue A 5195  D VITIA    Alpha Aql   Alpha Ari   Alpha Aur    Alpha Boo    Alpha Car    Alpha CMa    Alpha CMi  Alpha Her    Alpha Hya      Alpha Lyr      Alpha Ori    Alpha Sco    Alpha Tau      Beta And      Beta Gem      Beta Peg    Epsilon Mus  Eta Sgr    Gamma          Gamma Cru    Gamma Dra  IRC 10216  Lambda Vel  Mu Cep    Mu UMa  Sigma Lib    MIRAC  MIRAC  MIRAC  MIRAC  Cohen  Hanner  MIRAC  MIRAC  Cohen  MIRAC  MIRAC  MIRAC  Cohen  MIRAC  Cohen  MIRAC  MIRAC  MIRAC  Cohen  Hanner  MIRAC  Cohen  Hanner  MIRAC  Cohen  Hanner  MIRAC  Cohen  Hanner  MIRAC  MIRAC  MIRAC  Hanner  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC       RA    19 48  02 04  05 12  14 13    06 22  06 42    07 36  17 12  09 25    18 35    05 52  16 26  04 33    01 06    07 42    23 01    12 15  18 14  19 43    12 28  17 55  09 45  09 06  21 42  10 19  15 01     8 44   23 13   45 56   19 26     52 40   16 38     05 21   14 26   08 26     38 44     07 23   26 19   16 24     35 21     28 08     27 48     67 41   36 46   10 29     56 50   5 1 30   13 31   43 14   58 33   41 45   25 05    2 2    0 22   0 64   1 78   3   3 04     1 31   1 35   1 37   0 65   3 48   1 21   1 22     4   3 7   2 8   2 9     1 83   1 89     1 09   1 12     2 22   2 29     1 42   1 55   0 52     3 16   1 3  0 6  1 56   1 65   0 86   1 41    Table   2 2 Standa
16.     2  One and two airmass  With the dome and mirror covers open and tracking off  obtain 10 grab  mode images at a 2 sec integration time with the telescope at the zenith and at 2 airmass  elevation  30 degrees      3  Off source frames  Use off source frames from a normal set of observations  chop  chop nod   or nod  which cover a reasonably large change in sky flux  Use one set for high and another for the  low flux observations     In each case  save the gain map in the observing directory  using the Save command from the OBS        DISP  menus  Use    file name that identifies the filter and date  i e   O 1171008 GAN  The header  will be the same as one of the GRAB observations used to make the map  and the Comment field will  contain a record of the images used to make the map     10 3 Preparing a Flat Field    The flat field image is subtracted from the data image to remove any gradients in the background   In normal observing mode when the telescope is chopping and nodding  the telescope beamswitching  takes care of background gradients  so a flat field is not necessary  The flat field is useful  however   when grabbing images  The flat field is subtracted from the on source grab  producing an image of  the source without background  This mode is useful when trying to acquire an object or focusing   since the image rate can be much faster than if the telescope is chopped and nodded     The best way to obtain a flat field image is to move the telescope beam off the sou
17.     Figure A16 7 shows the signal processor timing  Each signal processor board servers two channels  with separate amplifiers and A D s and shared digital coadder and coadder memory  Each FSTCLK  transition advances the array multiplexer one block to a new set of pixels  At the last memory write  of a coadd sequence the data is directed to a FIFO memory and the coadder memory locations are  zeroed  The A D convert and coadder memory write are triggered at the trailing edge of the timing  pulse  The analog signal in the figure represents the transition from one pixel to the next with a time  constant of the array output source follower and cable capacitance plus any additional selectable  filtering on the board  The track and hold hold and A D convert begin toward the end of the pixel  sample time  The two A D outputs are then sequentially selected and coadded into the coadder  memory  The shading shows the timing path for processing one pixel     Figure 16 8 shows the timing of the array read in burst mode with chopping  The chopper external  reference signal is derived from the camera timing as shown  The array is read continuously during    5 22 99    the chop cycle       this  example  the read time is  1 092 msec and the chop  frequency 10 Hz  Each box  in all but the last line of the  figure represents    single  read of the full array     At the first read coadd  the  array is reset        the  coadder output for each  channel written to a  separate FIFO memory  For  t
18.    26 19   14 26   5 1 30   36 46   38 44     10 29     8 44   58 33     27 48    2 2     1 83   1 89     0 64   2 8   2 9     1 78     1 31   1 35   1 37   0 65   1 09   1 12    1 56   1 21   1 22   0 6   0 86   1 42   3 16   3   3 04     1 41   3 7   3 48   1 3   1 55     0 52    0 22   1 65   2 29   2 22    3 8     2 05   2 02     0 71   3   3 05     1 86   4 5   1 43   1 4   1 36   0 68   1 2   1 22    1 75   1 3   1 36   3 5   0 95   1 6   3 33   3 12   3 15     1 46   4 2   3 73   1 4   1 7     0 76    0 2   2 3   2 47   2 45    4 8     1 8   1 78     0 6   2 8   2 77     1 92   4 16   1 44   1 36   1 36   0 68   1 12   1 09    1 41   1 16   1 12   4 4   0 7   1 3   3 05   2 96   2 93     1 4   3 9   3 4   1 2   1 4     0 62    0 2   2 1   2 2   2 2    Wavelength  um    Magnitudes    7 9    2     0 78   2 95     1 9    4 75   1 45   1 37     0 68   1 22    1 65   1 24     72   0 87   1 5   3 14   3 08     1 6   4 4   3 8   1 3   1 57     0 7     2 7     2 45    8 8     2   1 96   1 98   0 78   2 98   2 95   2 97   1 9   4 75   1 45   1 38   1 35   0 68   1 22   1 21   1 23  1 65   1 24   1 25   7 2   0 93   1 5   3 36   3 16   3 12   3 14   1 6   4 4   3 85   1 3   1 61     0 7   0 73     3 3    2 37   2 45   2 44    9 8     2 05     2 07   0 75   3     3 06   1 9   5 1   1 5   1 39     0 7   1 19     1 24  1 73   1 31     7 6    0 95   1 73   3 37   3 13     3 18   1 6   4 5   3 88   1 44   1 7     0 78     0 8     4 2     2 51   2 5    10 3     2 07     2 1   0 75   3
19.    40  61  72  75 77  79  80  93  99    101  144   flip25  48  82  83  96  98  127  152  159  201   focus    16  17  26  40  47 49  56  127  129    167  184  188  195  196  198 200    frequency mode                     86            REA 57  100  131  227  function                           42  66    gain          40  50  60  61  68  76 78  95  99   101  103  105  131  140  141  159  gain matrix                        61  gaussian        25  48  62  85  88  89  152  GRAB 40  50  60  63  66  68  70 72  75  76   91  117  132  135  140  146  150     194  197  grayscale      21  50  61  62  82  84  88  98  hardcopy                    87  89  91    hardware21  42  57  59  62  66  71  132  148   174  179  206   header 19  21  23  24  31 34  39  40  42 44   48  59  62  65 68  71  73  74  76  80    82  93 96  101  117  125  133 135    138 140  144 146  152  154  155    161  194  197  200  201  206  208     228  header                    44  59  101  135  helium             3  13  16  17  181 183  help oua Seb ees 67  94  137  143  227  histogram 522222222222    75  85 87  hold time                 126  182  183  ignore                                  94  increment                 74  116  147    integration  9  35  39  40  44  45  48  56  61   65  70  71  74  76  77  95  101 105    117  135  200  201  207  208  210    211   interpolation                       85    5 22 99    IRoattdy voveo tee aa ERR 135  201  IRAF        95  96  99  100  137  139 141           3  4  6  9 11  13  15
20.    9600              8 bits    Fh Fh    Of                                                                                                                                                                            146 MIRAC User   s Manual  A12 1 2 OBS  Mode               Observe                              or 777771  Chop or Grab Chop  Chop    Nod Two beams      Step        Off  How many Obs per Run 2  Fast Data mode Off  Continuous coimaging Off  Ask for offsets Off  Read Offsets every Run Off r Nod 1  Offset file name o tinid off      Beep  Deutsch Mode         loft    Do all offsets in 1 Run On  Two beams    Use Command file for run Off           Beams    The Command file name Off  Mode FlipFlopChop Off  A12 1 3 OBS  Header  p   Header Information                                  Parameters           Observing Parameters   gt  Int Time  per beam sec  5 068  Source Information   gt  Frame Time  ms  17 4763  Filter Settings   gt  Read Time  ms  1 0923  Hardware Settings   gt          1   1     1 1 psec  Telescope  amp  Site   gt  Chop Frequency 8 803  Data Files   gt  Total Frames      1 beam 291  i    Burst Mode On  Sample Mode Single  How Many Frames Coimage 3  Nod and Chop parameters   gt            Sample Mode          Level of Flux Medium      Max  Frames Coimage 4096   Single   Chop wait reads 2   Double   Burst wait cycles 7  L                         Time  ms   2             Pixel Time        3  A  1 0923     1 1 psec  B  2 1845 B  2 1 usec  Cs 4 3691 Ca 4 3 psec  
21.    Infrared secondary  if it in not at telescope     MIRAC TRAVELING KIT  Taken with personal baggage   05 22 99     Shipping folder with instructions and shipping labels  Shipping inventory  Plastic case with   Jackknife or scissors   Sharpie   Pens  MIRAC Users Manual Master Copy  Current Observing proposals  Current Logistics  Airmass lists  Object lists    178 MIRAC User s Manual    5 22 99   14  Hardware Preparation and Setup 179    Appendix 14  Hardware Preparation and Setup    A14 1 Observatory Preparation Requirements    The observatory preparation requirements are given in Section 3 3     A14 2 Unpacking    Unpacking should be carried out according to the instructions in Section A13 4     A14 3 Cryostat Preparation  A14 3 1 Protection of Detector and Cryostat    At all times when the cryostat is not connected to the camera electronics  the connector caps with  conducting foam should be on the cryostat signal and clock connectors  When these caps or  cables are installed or removed  care must be taken to keep hands in contact with the cryostat case  to prevent static electricity discharge to the connectors     The cryostat window cover should be on the cryostat at all times when not observing  The LN   shutter  magnification  and pupil actuators should be withdrawn from the cryostat when  transporting it       14 3 2 Cryostat Vacuum Pumpdown    For vacuum pumping  open the LN2 shutter and set the pupil slide to the largest  f 15   CCW  extreme position  pupil opening 
22.    The pupil imaging lens can also be used with a star in the center of the field to observe the  uniformity of the illumination of the telescope aperture by the star     A14 11 2 Dichroic Alignment using Sky Dome Contrast  The pupil and magnification should be properly set as described in Section A14 8     The alignment procedure depends on the contrast between the cold sky and the warm mirror  cover or dome shutters at mid infrared wavelengths  If the camera beam is correctly aimed at the  secondary  the camera will view the sky via the secondary and full primary aperture  If the beam  is totally off the secondary  the camera will view the sky directly     Set the wavelength to 11 7      and the frame time to maintain linear operation for dome  temperature flux  Use the MIRAC menu    UTIL  Scope with the following settings  First display column  Second display column 128  Offset for second display 0  Make Scope Header 2 Obs Header    UTIL  Scope Edit Scope Header Observing Parameters  Int Time 2    UTIL  Scope Change Display Parameters Display size  limits    Max x 128  Min x 0  Max y 2000    Min y  2000    198 MIRAC User s Manual    Auto x off  Auto y off    Change Max  Min y as required for adequate sensitivity   The steps are     Step 1  Set the telescope to the zenith or some other direction to avoid daytime sun  It is  most convenient if the slit is oriented N S or E W  Open the telescope shutter  wind  screens  and mirror cover  Watch the scope display as a wind scree
23.    bias shield             Case  system ground   Clock reference          Signal Return Connected  Signal Return   to coax  Dewar Case  shield inside                       CO            7  7  1  2  3  4  2  6       5 22 99   18  Power Supply Voltage Current and Power    Appendix 18  Power Supply Voltage  Current  and Power    Table A18 1 Power Supply Voltage and Current    Switch Power  Pos Supply    Preamp    Preamp     Bias     Bias     Clock   A D   Signal Proc    Signal Proc    Digital   Temp Monitor    Temp Monitor                                             Shunt resistance 10 4 milliQ     Circuit     V      15   15   15   15  4 9   5 2   15   15   5   15   15    Backpln     V     19    9  19   19 1  12 0   8 6  19 5   19 2  7 5  19   19 1    Supply     V     20 8   20 5  20 3   21 3  12 0   10 7  21 2   20 9  11 9  20 2   20 2    Test   V     19 0   19 2  19 1   19 2  11 9   9 8  20 4   20 3  10 3  19 1   19 2    Shunt   mV     1 9   1 5      4  1 0   9 8  19 4   17 4  97 8      5    221    Current   Amp     18    14  058    038  096    94  1 9   1 7  9 4  077    048    222    Switch  Pos                                             Power  Supply    Preamp    Preamp     Bias     Bias     Clock   A D   Signal Proc    Signal Proc    Digital   Temp Monitor    Temp Monitor      Table A18 3 Power Supply Power Dissipation    Switch Power    MIRAC User   s Manual    Power One  Model    HAA24 0 6  HAA24 0 6    HB12 1 7  HB12 1 7  HN24 3 6  HN24 3 6  HE12 10 2  HAA24 0 6    Regu
24.    gt  Die   cl gt  imarith mask117   mask117 mask117   cl   wfits mask117 mask117 fts   File 1  mask117   gt  mask117 fts 1 5 AIRMASS Size   32 x 20  pixtype short bitpix 16 blkfac fixed scaling none  2 Header 1 Data logical  2880 byte  records written   cl   wfits gainll7 gainll7 fts   File 1          117     gainll7 fts 1 5 AIRMASS Size   32 x 20  pixtype real bitpix  32 blkfac fixed scaling none  2 Header 1 Data logical  2880 byte  records written   cl    mrc2fts c921210a   r 200 216  e 4  g gainll7 fts  m mask117 fts   Reading mask file mask117 fts   Reading gain file gainll7 fts   Reading c921210a 200   writing   921210a 200    Reading    c92    1210a 201   writing   921210a 201      o O N            1                        12    513        20     21  122    23     24    R      R  R    R                            cl              E  N  2  R          2            2                          f    c  c  i  i    NTFNANOQOQA      5 22 99 A10  Reduction of MIRAC Data using IRAF    eading c921210a 216   writing   921210a 216  1 gt   aircor  921210    0 2  r 200 218   eading   921210a 200   writing   921210a 200  eading   921210a 201   writing   921210a 201    eading   921210a 216   writing   921210a 216  l gt  rfits   92  2   oldirafnamet  RAF filename  a                              ile    0001 ALPHA TAU Size   130 x 84  File  a0001 restored to IRAF File  1921210   200   ile    0002 ALPHA TAU Size   130 x 84  File    0002 restored to IRAF File  1921210   201   1 gt  15 192   
25.   0 30667 Avg  0 0025 Num  16384  Background RMS  0 30096 Avg  0 0009 Num  16107  Source Sum  26 5 Num  277  lt  39   5     Flux  3488 5 RMS  0 01 DIF   0 0     Limits  A D  lt  5415  1320 gt  LinMax  4190 FullW  7508 FrameErrors   Flux MaxMin    3585  339225 BLIP  1 04 Lev  Medium OutOfRange  lt   OBS   4 02 97 14 12 03 c970402a 010 Simulated Star IDLE 0 00 0 02 O 16  DISP  4 02 97 14 11 49 21 Data not saved Simulated Star Mode  Current       Figure 9 2 Pull down Menu for Next Observing Parameters     Most parameters that are set in the submenus are not changed until exiting the menu  This allows the  user the option to cancel changes made  Some things cannot be canceled  such as overwriting files  and moving filters  but most parameters can  Some functions in submenus  such as the image display  buffer loading  automatically return to the top line menu after executing  Other functions  such as  altering header parameters  changing display options  etc   must be exited manually  Pressing the  PageUp key moves up one submenu level  so if the current submenu level is 2  pressing PageUp twice  will return to the top line menu  The ESC key will immediately return to the top line menu from any  submenu level  Both of these methods save any changes made in the submenus made since leaving  the top line menu  The Alt F1 key will also exit to the top line menu  but it ignores all  cancel able   changes made since entering the submenu from the top line     In the following description
26.   26   5 4 Complete Shut Down and Packing                                      30   6  Nightly Startup and Shutdown Check   45 8                                      31  6 1  Nightly               31   6 2 Nightly Shutdown Tasks                                              35   7  Observing Procedures and Check Lists                                          39    ii MIRAC User   s Manual  7 1 Check List for each Setof                                                            39  7 2 Check List for    Nights Observations                                    40  7 3 Wavelengths  Frame Times  Frame Filter Link Files and Filter Change Times      40  TA Macto AldS i25            citac eeru        AP LO        a E Us 42     Command Filesi        set          ea Res aE E ind vu tette oa E 43  7 6  Offset Piles  slice ad esos State oed oo e ELS            E a                 46  TT HOCUS Sel                         Sood sas Cobb eade atl             47  7 8 Acquisition of Star and Focus                                          48  7 9 Final Telescope Focusing                                             49  1 10  Autosuiding          5  2                        49  TIN  Autoguiding at UKIRT 256                     SEEN eae        49  TAZ  Observing TIMES 4                                         EQ RE 49  1 13  Calculatng Image Seale         Sees ue tee eae        50  T I4 Printing Images          her                    wea oe eel        50  8  Short Form Instructions for Running MIRAC
27.   40  44  46  48   55  56  60  66  74  82  101 104  120    122  135  136  151  153  194  195    198  200  201   arithmetic          4  69  70  97  159  229  array 3  4  7 9  11  25  40  46  47  61 63  71   74  75  77 85  87  94 98  101 105    135  136  152  153  183  193  198    201  206 211  213 215  217 219    arrow keys ves ves v 21  31  64  75  ASCII output                  95  158  auto functions                      93  autoscaling                        84    background   3  7 11  41  62  63  66  68  70   76 78  80  85  89  101  103  104  117   195  230  232  backing                      36  235 237  balance      ot es Bh      196  bias8  73  125  135  148  151  168  175  176   192  205  207  208  210  213 216  218   220 222                 epu wed 7  8  60  63  125 152  BOR        ens 22 31  100  236  BOROBS                  21 22 100  CMMIRAC      23  59  119  123  145  162    245    Index    cables26 28  30  37  164  169 171  175  176   179  187  188  191  192  196  224    225   calibration19  49  50  94  105  107  116  118   125  143  193  218   cancel icu            65  67  151  162  catalog 19  23  32  34  39  40  54  107  114   119 123  127  143  144  177   centroid                  62  81  87  154  chop 6  9 11  21  23  24  31 33  35  39  40   42  43  47 50  55  56  60 63  66  68    72  75  76  79  95  97  99  101 104    117  125  127  129  131  132  135    136  145 147  150  191  198 200    211  214   chopper 4  9  11  15  16  29  34  35  49  68   71  72  101 
28.   77  81  97  105  140  tape 1  26  28  31  36  57  99  164  169  170   172 174  199  224  225  227  233    235 238   telescope 3  4  6  9 16  19  21  22  24  26 31   33 37  44  46 50  55  59  62  68  70    72 74  76 78  83  99  101 105  119    123  125 127  149  151  167  172    177  182 186  188 191  194 201    203  236  237  239  241  242   telescope control 14  15  19  24  31  33  34   68  72  73  119  123  151  183  191    199 201   telnet    ice pw Mak aren        RIS 227  temperature 8  11  27  31  33 35  54  56  61   94  95  101  103  115 118  143  168    169  176  181  182  191 194  197    207  208  214 216  218  220  224     225  239  time                                    104  ultra fast data                       96  UT          22  32  123 125  127 129  135    UTIL 34  42  50  71  72  75  76  82  83  93   95  102  117  131  145  152  158 162     5 22 99 Index 249    170    197  201   vacuum 14  16  29  125  126  172  179 181   194  223  226   World Wide Web              1  3  239    
29.   888  e LLLI TIL LLL  EL tall TT    Sooo         1                        R             eee           21    ostat Inputs and Outputs      17  Cry    5 22 99       L   j               J       M       m      M             M              M                 M      M             n              1 Output       9 2  wf af af wf af af sf sf af af of sf sf af 4  4  of v    X       l       5  5l      3l    5  3  5  5  5l 3l 3  amp 8   amp g S            amp   5  2  o  6  6  6  6  5  2  5  2  5  5  5              02  s     gt        gt    gt    gt      gt    gt    gt    gt      gt    gt                   al          f  wl        ol ol Sf           9  Sf          5        d    el el   af    amp l Al ayo gt 4  6  8 5 o5    R  al     3   3   2      2  2     2  2  2  5   5  5  5  5       5      5           Sf Of OF OF Of OF OF OF OF      SG  5f Ss    f 5           S            4 Sig          Table   17                      218 MIRAC User s Manual    Table A17 5 Grounds and Array Temperature Sensor            No Panel Cryost NOM Name Voltage Function Cable  Conn Conn Ohms                      mm          Sig A            Sig Ret Package flr    go ee rs                                                                             nu       Sig a e  g Cryo Case    Dig E  F  H  0     Cryo case  26 27 28 14 31    LH            Notes       pins 9  43  51  58         68 should be very low impedance to ground to minimize noise     Combined resistance less than 10 Ohms     Table A17 6 Array Resistance T
30.   Alpha Sco  Alpha Tau    Beta And    Beta Gem    Beta Peg    Epsilon Mus  Eta Sgr  Gamma Aql    Gamma Cru  Gamma Dra  IRC 10216  Lambda Vel  Mu Cep   Mu UMa  Sigma Lib    MIRAC  MIRAC  MIRAC  MIRAC  Cohen  Hanner  MIRAC  MIRAC  Cohen  MIRAC  MIRAC  MIRAC  Cohen  MIRAC  Cohen  MIRAC  MIRAC  MIRAC  Cohen  Hanner  MIRAC  Cohen  Hanner  MIRAC  Cohen  Hanner  MIRAC  Cohen  Hanner  MIRAC  MIRAC  MIRAC  Hanner  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC       19 48  02 04  05 12  14 13    06 22  06 42    07 36  17 12  09 25    18 35    05 52  16 26  04 33    01 06    07 42    23 01    12 15  18 14  19 43    12 28  17 55  09 45  09 06  21 42  10 19  15 01     8 44   23 13   45 56   19 26     52 40   16 38     05 21   14 26   08 26     38 44     07 23   26 19   16 24     35 21     28 08     27 48     67 41   36 46   10 29     56 50   51 30   13 31    43 14   58 33   41 45    25 05    2    505  1114  3184  9793   10161    2065  2143  2182  1124  15238  1883  1901  618  618  24600  18661  8146  8932    3334  3523    1686  1734    4775  5093    2285  2576  998    11348  2046  356  147  2824  1364  2264    Table A2 3 Standard Stars with Flux Density      Alphabetical Order    2 3 8    203  468  1351  4310  4431    909  884  852  456  7560  806  852  243  243  15364  11655  3859  4041    1609  1565    735  749    2325  2369    1063  1165  490    5230  884  6116  48 6  2025  584  934    Wavelength  um    Janskys    4 8 7 9 8 8 9 8 103  131 608 495 402 36 5  274 125 101 801 728  925 35
31.   File    0002 1 0 AIRMASS Size   32 x 20  File    0002 restored to IRAF File  1921210a 220       File    0080 1 0 AIRMASS Size   32 x 20  File  a0080 restored to IRAF File  i921210a 298    138       aaaaaaa  VVVVV VY    Dec 10    copy f   copy f   edit aml  edit am2  l gt  imcombine  aml aml 117 combine average       B95    combine      0     blank    MIRAC User   s Manual    del f92      ls 192  2   imh  gt  flistl  listl aml   listl am2                 7                    average    Images    1921210a 219 imh  1921210a 220 imh       1921210a 228 imh       Output image   aml 117  ncombine   10  cl gt  imcombine  am2 am2_117 combine average    Dec 10    blank    i  combine    0    8                 8                                      Images    1921210a 279 imh  1921210a 280 imh    1921210a 288 imh                                           Output image   am2_117  ncombine   10   cl   imarith am2 117   aml 117         117   cl   imstat         117                                  STDDEV MIN MAX           117 640 T8  25 01  16 28 251 7   cl   displ         117 22 251   frame to be written into  1 4   2     21    Oe 2   Zooks   cl gt  imarith         117   187 0         117   cl   imarith 1 0           117         117        gt  imstat         117                                  STDDEV MIN MAX           117 640 195 0 1337  0 08704 1 346   cl   imarith gainll7   0 5         117 pixtype short   cl   displ mask117 22 5 21  2   frame to be written into  1 4   2     212   2   Be
32.   IL J StDevTable  Header Page  Values  XHex Values  MCAD format                            5 22 99   13  Shipping Procedures and Shipping Inventory 163    Appendix 13  Shipping Procedures and Shipping Inventory  A13 1 Shipping Procedures    Shipping is with the SAO or other institution contract shipper  currently Federal Express   We  use a  third party charge  to a FedEx account  For SAO  the approval for this and the account  number is obtained from Leslie Feldman at SAO  617 495 7428  email feldman cfa harvard edu    It is best to ship Monday allowing 5 working days for the shipment  Three working days are  normally required  The crates should be transported to and from the Federal Express facility by  UA or observatory personnel to avoid damage from local truckers     Airbill Instructions     1  From   address and phone number of shipper  below   Internal Billing Reference   Obtain from party paying for the shipment   3  To   address and phone number of destination  below     also  address of destination Fed Ex office to be held at  below   Check Hold Weekday  Hold Saturday   4    Check FedEx 2Day   Ab  Nothing checked   5  Check Other Package   6  Nothing checked   7 Payment  Check Third Party  Fed Ex Account No   Obtain from party paying for the shipment   Credit card number  leave blank  8 Items total 790 165  Each item is within standard Fedex weight and size limit     Confirm number of items  and hold destination at Fedex depot     Federal Express Information and Tr
33.   Take three sets of data   1  Radiation source through the polystyrene  OBS  Next Object Name CVF Cal w  Polystyrene  OBS  Header Filter Init Filters   First wheel CVF Start   Run   2  Radiation source direct  Slide the sample out of the beam   OBS  Next Object Name Hot source direct  OBS  Header Filter First wheel CFV Start  Run   3  Room temperature radiation  Place cardboard between radiation source and mask   OBS  Next Object Name Room temperature  OBS  Header Filter First wheel CFV Start  Run    OBS  Next Save off    This gives three sets of 200 files  one without the sample  one with the hot source  and one of the  room temperature background      4  Reduction of data  Create three ASCII files of the mean flux for each of the sets of files above  The following will    create an ASCII file with a line for each input image with obs   wavelength  and skyflux   UTIL  Functi Output ASCII files Skyflux Output file name      WITHPOLY TXT     118 MIRAC User s Manual    Data file string     file range   Begin output    Import these three files into a spreadsheet such as Excel along with the reference Beckman  Spectrophotometer scans of the polystyrene sample  The polystyrene absorption is the source with  polystyrene minus the room temperature card divided by the source direct  Previous examples with  Supercalc    cal files  and Excel    xls files  are in      MIRAC PC in the directory c  cvf  The  calibration process is to determine a scale and shift correction to the waveleng
34.   Telescope nod ETHERNET  IRTF   UKIRT RS232   UKIRT   SO RS232  S O  90 inch   Telescope offset  Same as above   Nod beam control  MIRAC generated nod off  IRTF  S O   on  UKIRT with MIRAC nod   Guiding no guiding  RTF  UKIRT with no  guiding   main beam  UKIRT guided w  MIRAC nod   or both beams     d    RA nod vector  set for UKIRT   Dec nod vector d     Offset control parameters    Command tel  offsets on   Mode of offsets absolute   Offset delay  ms  2000  UKIRT with guiding 5000  w o guiding 4000   Anti bklsh offsets off   RA Abklsh 0   Dec Abklsh 0   Abklsh delay 0   Tel  offset mode No guiding  w o guiding     Guided offset  IRTF  UKIRT w  guiding    Other Nod and chop parameters are covered in Section 6 1  Nightly startup tasks Item 9   16  Check display settings    NOTE  The macro F6  Dispparm  can be used to make all the following settings   Disp  Init    5 22 99 5  Start and End of Run Setup and Shutdown Check Lists 25             of Display Array  Stats and Fit  Stats On  Fit Gaussian  Region Full Map  Invert Off  Auto Range Settings  Autorange mode MinMax  Noise min factor  2  Max Noise factor 5  Orientation  for camera window  North East  Horizontal flip on off  Vertical flip on on  Transpose off on  Direction on  North up  East left  Magnified image on  Width Display  FWHM Display on  Small Display Limit 0  Large Disp Limit 5  Number for running ave 5  Arcsec Grid Display  Arcsec grid lines On  Grid spacing 5  Color         Screen Mode Heat SVGA  Force B W Mod
35.   Weather and Tau Information from the Web    A22 1 Arizona Weather Information    Weather information and satellite images for Arizona observatory sites can be obtained from   Steward Observatory  http   www as arizona edu   Steward Observatory  Facilities  Telescope Schedules  Observers Home Page    Observing Information  Weather    A22 2 Mt Graham Tau Meter Data    A variety of weather information  satellite photos  and submm transmission can be obtained from  Steward Observatory  http   www as arizona edu   Specific Projects  Sub millimeter Telescope Observatory  Local Weather   Atmospheric Conditions at the SMTO    A22 3 Mauna Kea Weather Information from University of Hawaii    The best source for images of Hawaiian weather is   IR GOES images  http   lumahai soest hawaii edu gifs hawaii_ir  gif  Visible light images  http   lumahai soest hawati edu gifs hawaii_vis  gif  These are updated hourly and show a few hundred miles around the islands     A22 4 Mauna Kea Weather Information from the Gemini Home Page    The Gemini WWW home page gives access to daily photos of the Gemini construction site   UKIRT current conditions  and many weather satellite pictures   http   www gemini edu  Construction and Operations   Photo gallery   Daily Construction Pictures from Mauna  Kea  Current conditions    A22 5 UKIRT Weather Information for Mauna Kea    The current temperature  windspeed  wind direction  pressure  and humidity at the UKIRT dome  can be retrieved from the World Wide 
36.   ee gow a Be 81  11 1 6 Multiple Image                                                 82  11 1 7 Processed Images                                           83   1 1 8  NOIE      ata dite dee E             RR E E E E A FAR RR E ERE VE 83  11 2 2Display Mod  s            RO eA RO          ae BR    83  DI 2D Grayscale                                   STE 84  11 2 2 Contour  4 12922 9 s                                 ESAE TEE 84                       yy                                                                                      85  NE sicui PC  86  L1  2 3 Hist  gtam en uc        da orsa RV ga a UP TIU an Ea oa SA Ea 86  11 2 6  Radial Plot so sasi orient                                          SER 87  11 2 7 Plot Command Line Options                                   88  LES          Sep                            a IUS                   se n d 88        TO Redraw      qu eue a SCR urat coo Rag di Rios ur    89       Fit essct                             89  L2 7E                                                    EE EUR ed ee d 90  T2 ae        ee             a ee ee 90      56 EAFOOODy ten 66 270                   Hcet esee Eee Ee utes 91  11 277 O  tpUt oos          e              edo                  91   12  Utiles es Sou      ple Se toa                                          Coe AVR So eet oe      93  12 1 SS COpe DIS play          Sedo rd edoceri elk Sana deor Gear kha nt Sosa UR 93  12 2 Temperature and Heater Monitor                                      
37.   proper orientation in any of the display modes other than the main image display screen  such as in  the Contour  Grayscale  etc   the image must be flipped here  Contrary to the flip options in  DISP  INIT  these options change the position of the data in the array  rather than just choosing  which direction to plot the data  so if the current image is saved  it will be saved in the flipped mode   If the directions are set such that N is at the top and E is at the left  the same flips necessary in  DISP  INIT must be performed on the image  For example  if using MOSAIC to create an image   and the X flip is necessary to display the data with N at top and E on the left  then the X flip must  be performed on the image to correctly orient the image     Transpose   This exchanges rows and columns     5 22 99 13  Post Processing Images 99    13  Post Processing Images    Much of the simple data reduction can be performed on the MIRAC computer  but usually the final  reduction will be done on a VAX  or on a Sun using IRAF  The advantages are the increased  computing power  disk and tape storage space  and the capabilities of the image processing software  that has been written for these computers     13 1 Converting files to FITS format    The files must first be put into a format that these processing programs can easily read  This is done  by converting to FITS format  either after transferring to another computer or by converting them  on the PC before transferring     13 1 1
38.   such as  int5      Example of Command file   JUPMAIN CMD    FILTER CVF 13 30  EM FRAME33   EM INTI   RUN  FILTER CVF 10 74  PAUSE 5   RUN  FILTER CVF 8 57  PAUSE 5   EM FRAME70  RUN  FILTER CVF 7 85  PAUSE 5   EM       5   RUN   RUN   RUN   FILTER 17 4Q0  PAUSE 5   EM INTI   EM FRAME 7  RUN   RUN   FILTER 17 801  PAUSE 5   RUN   RUN   FILTER 20 6Q3  PAUSE 5   EM       5   EM FRAMES  RUN   RUN   END       46 MIRAC User s Manual    7 6 Offset Files    Offset files are text files created and edited with any text editor such as DOS edit  Each line contains  RA and Dec offset in arcsec  The MIRAC pixel scale and field size are given in Table 2 1  Offset  files in the observing directory can be listed from the DOS prompt with  dir   off   and displayed or edited with type or edit  When Obs  Next ReadOffsets is      and Run is executed   the telescope is successively moved to each offset position followed by  How Many  observations  at that position  Generally the last offset is zero in order to facilitate checking pointing and tracking   Examples of offset files are             5         for measuring focal plane scale at IRTF and 90 inch with four points in corners of array  ending at center   1414   1414   14  14  14  14  00    UKIRT5 OFF  for measuring focal plane scale at UKIRT with four points in corners of array  ending at center   11 11   11 11   11  11  11  11  00    MMTS5 OFF  for measuring focal plane scale at        f 15 with four points in corners of array  ending at 
39.   the location of a function will be described by its position in the MIRAC  menus  The position is specified by giving the name of the top line command menu  followed by the  submenu under it  For example  to indicate the location of the command to set the integration time  is located in the OBS command line  Header command  submenu Observation parameters  This is  indicated by the following shorthand notation  OBS  Header Observing Parameters  The top line  menu is given followed by a colon  and the submenus indicated by slashes  The OBS  Next menu is  illustrated in Figure 9 2 with typical settings  Note  when camera parameters are changed  the  program pauses after Run is executed before starting a new observation     66 MIRAC User s Manual    The Alt M key and Function keys are used to control the definition and execution of macros  This  is described in Section 7 4     9 6 Selecting Display Modes and Options    The display mode is set in DISP  Load Mode  The desired mode for displaying current observations  as they are being made is current  Other modes are discussed in Chapter 11     Display options are set in DISP  Init  Statistics options are selected in DISP  Init Stats and Fit  Parameters  Fit Function provides for enabling and choosing a source fit function  Object Detection  Sigma gives the threshold in noise sigma for automatic detection of a signal above the mean  background  The mean background and background noise sigma are determined iteratively from the  pi
40.   two captive screws with a 3 16 ball driver     5  Mount the camera electronics on the cryostat  The electronics should first be inspected  for loose screws  properly seated circuit boards  and any other sign of a problem   The electronics mates to the dewar with a self aligning bracket  Insert and tighten  the two knurled head captive screws on the bottom  Insert and tighten two 8 32 x  3 4 screws on top with a 5 32 allen wrench     6  Use tubing with quick disconnect fitting to run dry air from east side of telescope  mounting flange to cryostat window  S O  2 3 m telescope   Air dryer power and  control valve are in room on east side of observing floor        L    MOUNTING FLANGE GUIDER IESU  BOX                            si       CAMERA  ELECTRONICS                      ji                                                                                                   CONTROLLER                          FILTER  0                                                    WEDGED SLIDE    20 Inches       Figure A14 5 MIRAC Camera Mounted on Telescope    5 22 99    TEMPERATURE  SENSOR   HEATER    FILTER  CONTROLLER    5 252      14  Hardware Preparation and Setup    a SIGNAL                        CHOPPER           POWER DETECTOR  RAME             NITOR       BIAS                                                DATA COMMAND  TEMPERATURE  MONITOR FIBER OPTIC       12 5  gt                 POWER                      O    POWER GND  LOCAL                                        Remote
41.  01     3 08   1 9   5 2   1 5   1 39     0 7   1 19     1 25  1 74   1 3     7 6    0 96   1 72   3 38   3 15     3 19   1 6   4 5   3 93   1 45   1 7     0 78     0 82     4 3     2 51   2 53    N     2 05     3 02     1 35     1 22     1 31     3 14     2 44    11 7     2 18   2 11   2 15   0 76   3 05   3 07   3 12   1 9   5 5   1 45   1 39   1 35   0 7   1 22   1 22   1 26  1 78   1 26   1 35   7 6   1 1   1 66   3 44   3 21   3 16   3 2   1 6   4 7   4 1   1 5   1 75  0  0   0 8   0 84  0   4 2   2 49   2 51   2 55    12 5     2 18     2 16   0 77   3 07     3 12   1 9   5 5   1 53   1 35     0 73   1 19     1 27  1 8   1 4     8   1 1   1 59   3 45   3 23     3 2   1 6   4 7   4 16   1 5   1 79     0 8    0 84   0 05   4 04     2 51   2 55    13 5     2 1     0 78   3 07     1 9   5 5   1 53   1 31     0 73   1 19    1 8   1 4     8   1 1   1 59   3 45   3 23     1 6   4 8   4 3   1 7   1 79     0 82     0 1   4 1    17 4     2 1     0 83   3 08     1 9    5 75   1 32   1 41     0 7   1 21    1 8   1 5     8 4   1 3   1 9   3 45   3 2     2    4 8   4 3   1 7   1 8     0 82     0 2   4 7    17 8     0 83   3 08     1 9    5 75   1 32   1 41     0 7   1 21    1 8   1 4     8 4   1 3   1 9   3 45   3 2     4 8   4 3   1 7   1 8     0 82     0 2   4 7     0 83   3 08     1 9    5 75   1 32   1 41     0 7   1 21    1 8   1 4     8 4   1 3   1 9   3 45   3 2     4 8   4 3   1 7   1 8     0 82     0 2   4 7    20 6     0 83   3 08     1 9    5 75   1 32   1 41     0 7   1 21
42.  05     1 22     2 44     5 5   4 7   3 05   3 07   3 12   2 18   2 11   2 15   1 22   1 22   1 26   2 51   2 49   2 55   1 66   1 75   0 8   0 84   3 44   1 5   7 6  1 78   4 2   1 1   1 6    12 5     0 05   0 77   1 9    3 23     3 2   1 53   1 35     0 73   4 16   1 4    0     5 5   4 7   3 07     3 12   2 18     2 16   1 19     1 27   2 51     2 55   1 59   1 79   0 8   0 84   3 45   1 5   8   1 8   4 04   1 1   1 6    13 5     0 1   0 78   1 9   3 23     1 53   1 31     0 73   4 3   1 4     5 5   4 8   3 07     1 19     2 6     1 59   1 79   0 82     3 45   1 7   8  1 8   4 1   1 1   1 6    17 4     0 2   0 83   1 9   3 2     1 32   1 41     0 7   43   1 5     5 75   4 8   3 08     1 21     1 9   1 8   0 82     3 45   1 7   8 4   1 8   4 7   1 3   2    17 8     0 2   0 83   1 9   3 2     1 32   1 41     0 7   4 3   1 4     5 75   4 8   3 08     1 21     1 9   1 8   0 82     3 45   1 7   8 4  1 8   4 7   1 3    18     0 2   0 83   1 9   3 2     1 32   1 41     0 7   4 3   1 4     5 75   4 8   3 08     1 21     1 9   1 8   0 82     3 45   1 7   8 4  1 8   4 7   1 3    20 6     0 2   0 83   1 9   3 2     1 32   1 41     0 7   4 3   1 4     5 75   4 8   3 08     1 21     1 9   1 8   0 82     3 45   1 7   8 4   1 8   4 8   1 3   2     3 16     1 34     1 35     3 08     2 12     1 23     2 51    66   4 57    sms                                601    Alpha Aql  Alpha Ari   Alpha Aur  Alpha Boo    Alpha Car  Alpha CMa    Alpha CMi  Alpha Her  Alpha Hya    Alpha Lyr    Alpha Ori
43.  1 NOD WAIT IME  SEC   NODOFFWT  3 000000000000e 00   NOD WAI TIME FOR BEAM 2  MAGNIFIC  4 382812380791e 01   MAGNIFICATION SETTING  DETBIAS   2 000000000000   00   DETECTOR BIAS VOLTS   HEATERV   1 427913784981   00   HEATER VOLTAGE   DE MP   5 370593547821e 00   DETECTOR TEMP   K                      432   TOTAL COADDS  IN EACH BEAM    ELESCLE  1 870000004768e 00   PIXEL SCALE  ARCSEC MM    INITX   1   X START PIXEL   INITY   1   Y START PIXEL   ENDX   128   X END PIXE   ENDY   128   Y END PIXEL   OFFSET1    0 000000000000   00   X OFFSET  PIXELS    OFFSET2    0 000000000000e 00   Y OFFSET  PIXELS    ARRAYXSZ  128   X ARRAY SIZE   ARRAYYSZ  128   Y ARRAY SIZE   MASKFILE     0 1lab1020 msk      OBSMODE   3   OBSERVING MODE   CHOP NOD  FILENAME   c981115a 520    SAMPMODE  O   0   SINGLE SAMPLE MODE  DELAYCYC  0   DELAY CYCLES   CLOCKRAT  0   CLOCK FREQUENCY  15 6 2 N HZ   COPERCHP  1   COIMAGES PER CHOP CYCLE                                  136                                                                                                                                                                                              MIRAC User s Manual                                                                                                                                                                                                                                                                                                                                            
44.  103  104  136  147  183    191  197 200  210   COCK Sy eck e Eo 205  206  209  210                    Bel aede 141  210  211  column   50  82  83  85  86  93 95  97  101   121  132  133  135  147  154  155    159  161  197  199  207 209   command file     35  39  42 45  56  117  146   150   constant       9  74  89  97  148  159  210  contour 79  83 85  89  90  98  155  157  161  conversion  94  96  99  100  107  131  136   158  208   cryogen   13 15  17  31  125  180  182  183   185  196  203   cryostat   3 5  11  14  16  17  24  26 29  31   37  116  118  125  126  164  168 170   172 176  179 183  185  186  191    192  194 196  203  206  213  214    223 226   current observation   44  53  64  71  79  80   150   CURRENT HDR   31  33  35  59  144  145            6 7  10  41 43  45  59  67  106  116   118  146  147  149  150  236  237   data file directory         32  79  144  159  data format               33  79  96  153    246 MIRAC User s Manual    datel9  22  31  32  35  60  64  76  77  81  95   125 129  135  144  227  229  235            xEWSRREXSEREEAG 19  124  136  200  default directory          45  59  79  143  default display                   83  97    detector4  7 9  11  26  31  33  54  60  61  63   75 78  94  95  101  103  104  135    148  173  175  176  179 182  193    194  196  207  208  213 216  224    225   dichroic   26  49  93  94  125  127  196 199  directory   19  21 23  25  32  36  42  45  46   50  53  54  56  59  60  67  75 77  79    93  95  96  101  11
45.  17  19  20  22 24   31  32  34  40  41  46 49  54  72  73    104  112  119 121  126  143  144    147 149  164 167  170  179  182    186  188 190  194 196  198 201    203  223  236  242    JUSTY                             82  97  229  Kitt Peak            11  14  124  149  241  laser printer                 21  119  191    Leve  23  24  31  33  39  40  54  62  65  66   68  72  75 78  80  85  89  90 94  117    125  126  147  152  155 157  166    168  174  177  182  183  191  197    199  200  208  214  230   LHe 14  15  28  29  115  125  126  168  169   172  176  177  180 183  203  220    223 226   linear 3 7  8  10  40  41  56  62  63  70  76   78  88  89  117  136  148  197  207    208  214   Ln2    15  16  28  29  53  57  126  136  168   169  172  179 183  193  194  197    203  220  223 226   log file    56  57  73  97  145  158  159  237  macro 23  24  32  33  40  42  43  50  59  144   158  160  233  237   magnification 4  6  10  24  41  59  67  74  78   125  127  135  148  172  179  180    194 197  201  223   mask 6  22  23  33  40  59  61  72  75 77  79   80  93  99  116  117  127  132  137    138  141  144  153  174  201  224   mask file              127  132  138  141  menu   19  21  22  31  34  39  40  42 45  53   54  59  62  64 68  74  77  79 81  83    84  88  89  93  94  96  101  160  196    197  200  201  235  236   MIRAC program   19  21  31 33  35  53  59   64  67  68  73  96  101  119  125    143  170  181  200  201   mode 4 9  10  23 25  33  35  39  41 43  45  
46.  3  which are multiplexed to 16 output MOSFET source followers by fast  column   and a slow  row  shift registers  and switching MOSFETS  Current from a detector pixel is integrated  on the capacitor  Cwr  and read out through a source follower The capacitor is reset through a reset  MOSFET  The detector input node is isolated from the integration capacitor by a direct injection  MOSFET  which allows a large linear output voltage swing across the integration capacitor without  affecting detector bias     208 MIRAC User s Manual    SELECT  Row 16      VRST VACC   VDD             HL  D  as    DETSUB     r r r          SELECT COL 1   SELECTCOL64            RESET    COL 1          VDI       SIGNAL    OUT  CUR       16 ea      R                    CUR_S VSOU             Figure A16 3 Boeing HF 16 Si As array unit cell     The array signals at the source follower outputs are in the range 4 4 to 2 1 V from reset to full well   The preamp shifts the voltage to center it in the A D range and applies a gain of 4  At this gain the  range of the A D is less than the range of the array output  Four voltage offsets  commanded by  OBS  Header Flux Level Low  Medium  High  and Variable  provide for covering from below zero  flux to medium flux  from low flux through the linear range  and from above medium flux through  saturation  respectively  within the     2 5 V      2048 A D range  The same commands control a  software offset which shifts the digital output for each range so that on the P
47.  48 50  59 61  64  66 74  76  78 87    89 91  93 95  98  100 102  104  117    120  122  129  131  132  135  136     247    143 146  150 155  161  162  194  199  200   208 210  214  229   mosaic    60  64  75  81  98  101  143  154   motor controller             67  170  176                                 50  77  81 97   nitrogen      15 17  136  173  180 183  193   nod 4  6  9 11  24  32 35  39  40  42  43  47    50  55  56  60 63  66  68 73  75  76    79  95  97  99  101 104  117  125    127  129  131  135  146  147  150    151  191  200  201   noise 3  7 11  25  41  47  62  63  66  75  77    78  80  83  97  101  103 105  125    129  144  152  154  208  218   object 19  23  33 35  39  40  42  43  47  50    55  56  64  66  74  76  77  80  103    117  119 123  125  129  133 135    147  172  177   object list                 A ERA es 120   OBS 19  21  23  24  31 35  39 46  48  59 62    65 68  71  73  74  76  82  93  94  101    102  117  119  129  135  144 146    150 152  155  158  161  162  164    183  191  194  196  197  200  201    206  208  241   observation   1  9  11  42 44  49  53  60  62    64  65  67  68  71 75  T1  79 81  95    101 105  131 133  135  136  150   OBSLIST      19 119  120  122  143  144   offset file      39  40  44  56  117  150  151   Offsets   9  23  24  35  39  42 44  50  62  73    74  77  80  81  83  105  125  141    146  151  200  201  208  220   offsetting modes                    74   on source          49  50  68  70  76  105   operation 42  50 
48.  603   6 8   W2      CVF  7 7   14 5 um  W1  P  Home all wheels W2                         A12 1 5 OBS  Wait                  observation with Current   Abort observing and coimaging   Stop continuous coimaging   L            12 1 6 OBS  Save                                        Save Options   Save All Off  Current image save   Next file number ili  Data file dir  d  d941229  Backup data Dir  i  d941229  Make FITS file of current obs                         Grab   Chop  Chop Nod  Nod 2beam  Nod 4beam             C  H EQ Hl El O OQ 0        print  savefits  findstar  stdparm  objparmn  dispparm  None defined   None defined   None defined   savrdrun                5 22 99   12 1  OBS  Command Line Menus 151    A12 1 7 OBS  Telesc                                        A  RA Offset 0 000  B  Dec Offset 0 000  C  Offset  Row 0 000  D  Offset  Col 0 000  Load Next Offset from File  Reset Offset file   Telescope Control  gt             Telescope Control       4  A  Tele  NOD Ethernet  B  Tele  OFFSET Ethernet  Nod Beam Control   gt   Position Commands   gt   Guide  amp  Track commands   gt   Offset control params   gt   Define current pos  as zero                   SO RS232  PLUSPULS  NEGPULSE  LEVEL      U                              ANUAL  Ethernet  KIRT RS232                               Move to next   Move to referenc   Move to current plus offset  RA offset   DEC offset   Move to offset  0 0    Motion CANCEL   Clear Diff                   TaI W                       Guide 
49.  64  73  75  79  80  82  83    94  100  102  154  193  197  206    207  214   orientation 25  29  61  66  78  83  89  96  98    125  127  132  136  157  199  201   Output    8  68  72  91  93 96  99  117 124    131  132  137 139  141  156 159    162  191  194  201  207  208  210    211  214  229 233  235                                             64   Page BS ar ma                                  gt     65    248 MIRAC User s Manual    PC3  4  19  21 23  26  31  33  34  36  44  55   57  59  60  64  67  71 73  94  95  99    100  102  118  119  122 124  131    133  136  143  170  175  183 185    188  191  199  200  205  208  211     235  237  performance                   1  3 94  personnel vo                                   163  PHONE  ics              163 165  227  243  plate scale    1      as 74  201    plot 23  59  61  62  83 90  93  98  115  116   137  144  155 157  161  179  181   power cable             28  191  192  205  power supply6  31  33  37  54  56  164  169   175  176  181  188  191  192  205    221 222   POWER UD a usa humus            26  33  print 19  25  42  44  50  51  66  88  91  120   121  144  150  157  160  162  227    228  230  232  233    printers          25  42  59  101  143  162  PRINTERS DAT              143  162  prn  nib 28 65 ose eme RES 21  143  processed map   oos ove                   79  PS Eu oiu SO ERG Rar eA    105    pupil   4  49  127  136  147  148  167  170   172  179  180  194 197  200  223                       ood bnc         
50.  8 252          Figure A14 6 Camera Electronics Connector Positions      14 6 Cabling and Connections    187    22 75       If the camera has been shipped and there is any indication of rough treatment of cables  these  should first be checked for damage by visual inspection of the connectors and by testing with a  resistance meter for continuity and shorts  This is especially true of the power and camera clock    cables     188 MIRAC User   s Manual    Laying Out the Cable       The cables from the control room to the telescope are laced together to make a single cable bundle  120 feet long  Each end has a protective sheath for the connectors  The power connectors are  plugged into dummy mating connectors for additional protection  The cable bundle is coiled in  the cable crate   3  with the camera end at the bottom with 12 feet free for access without  removing the entire cable from the crate during lab testing  The cable bundle is loaded into and  removed from the crate using dolly with swiveling casters so that the crate forms a reel which is  rotated allowing the cable to be removed without kinking  During the reeling  the excess twelve  feet  camera end  of cable is wrapped 3 4 turn around the outside of the crate hung from the crate  latches  It is essential to take extreme care not to damage the cables or connectors while loading  and removing the cable     The cable should be removed from the crate in the telescope chamber  The control room end   which comes out of t
51.  Camera Power Supply    The camera power supply voltages and currents are given in Appendix 18 and on the power  supply panel  When turning on the power supply it is a good idea to watch all the green indicator  lights come on and to note that none of them dim when the delay relay closure connects the  camera to the supplies     The supply voltages and currents can be monitored using the three banana jacks on the power  supply panel  The two left hand jacks used with a millivolt meter give the current  The middle  and right jack give the voltage  The voltages and currents should be checked if there is any  indication of a problem     The power supply relay and voltages can be checked without the camera and with or without the  power cable by inserting the dummy mating connector either at the power supply or at the camera  end of the power cable  This should be done if there is a suspicion of a power supply or power  cable problem     A16 3 Fiber Optic Command and Data Link    When the command and data links are properly operating  the data link LED lignt at the MIRAC  PC and the command link LED at the camera will both be on steadily  If either of these are off or  are intermittent  the fiber optic cable should be checked for damage and the ends cleaned with a  Q tip and alcohol       16 4 Biases and Clocks    The biases can be monitored with the bias monitor board plugged into the socket at the edge of  the bias box in the camera electronics or at the digital connector using
52.  Converting using a unix computer    The most commonly used way to reduce MIRAC files is to transfer them to a Unix computer and  convert them to FITS format using the C program mrc2fts described in Appendix 7  This program  can combine the chop nod images  apply a mask and a gain map  and expand the format  Then these  files can be further converted for processing with IRAF as described in Appendix 10     13 1 2 Using the MIRAC3 program to convert to FITS    The conversion process is described above in Section 12 5  This process reads in the data files from  the PC  does the necessary subtracting of off source frames  masking  subtracts the flat field  and  multiplies by the gain map if selected  The images can be expanded by powers of 2 for later  registration to the nearest subpixel  This process is less commonly used since it is more efficient to  transfer the smaller MIRAC3 formatted files and expand them on the workstation to be used for most  of the data reduction  Also  the PC program is slower in performing this step compared to most  workstations     13 2 Transferring files    Using PC NFS  the transfer of the data is simple  Assuming that one is using the MIRAC3 program  to convert the files  and has mounted a disk drive on a remote computer  and that drive has been  designated as       one simply sets the output file name in the FITS utility as I F920313A  for example   Then the FITS files are written directly to the remote drive in the proper format     If the MI
53.  Offset  Select Offset source Header Header  Calculation mode None User Input  Offset file name File  Expansion factor 1 Calculate  Enter data file string Headr File          E          Sou    rce o       Data file string al a10             Force Zero Averag Off  Verify every offset Off    Calculation  Radius of centroid region 2  Use flat expand Off None   Begin Mosaic Shift peak       Centroid                                           mode       Ji                Operation Mode             F Performing operation                          Enter the operation below      d  d940805 c940805b 228 b229   2            LL              REPLAY Setup             Frame number 0  Input files al a10    Pause after each image Off  Begin display                               Noise Display  Enter the column to display   1    Enter the files al al0     l                      i    5 22 99   12 2  DISP  Command Line Menus 155    A12 2 3 DISP  Header    Same Menus as OBS  Header    A12 2 4 DISP  Begin        Display Image  iL    WIL Displ                 Map Plot mode Contour   Slice direction Column   Contour Parameters   gt    Gray Plot Params Edit   gt                                                          directio 77     Row     Column        J  p     Contour Parameters              Num contour levels 12     Auto contour levels Off     Enter contour levels     Plot params edit        L al             1     Params Edit          Display Size Limits Style   gt   Labels of plot   gt   Contour 
54.  Plots  Figure A3 1 gives plots of the MIRAC3 N Band filters and atmospheric transmission     Figure A3 2 gives plots of the MIRAC3 Q band filters and atmospheric transmission  The filters  marked M are made by the University of Reading  The filter characteristics are taken from the  Michelle contract specifications for 25 K temperature  The filters marked Q are made by the British  firm FK Optical  US representative  ORT  The measurements are taken from FK Optical  measurements at room temperature corrected for LHe temperature by multiplying by 1 029  The  atmospheric transmission data comes from Glenn Orton     Figure A3 1 Plot of              N band filter and atmospheric transmission    116 MIRAC User s Manual                0 8 1  0 7    0 6   c          E  5 0 5 b      0 2     L         S 0 4       M E        0 3 4 o   0 2      0 1 L  0  14       Wavelength  microns     Figure 3 2 Plot of MIRAC3 Q band filter and atmospheric transmission    A3 2 CVF Calibration    The CVF wavelength calibration requires determining a scale  wavelength increment per filter  wheel stepper motor step  and an offset relative to the home position of the filter wheel  The first  should be very stable  The second can change if the CVF is removed from the filter wheel  the  home switch cam on the filter wheel adjusted  or the home switches support post moved     The two parameters can be determined by scanning the CVF looking through a calibrated  polystyrene sample sold by Beckman for this pur
55.  RUN command     The case of the commands is irrelevant  all commands are converted to uppercase before executing        commands are issued immediately after reading it from the file except for the RUN and WAIT  commands  those commands cause the program to wait until the current observation or series of  observations are complete before executing the next line of the command file     While the command file is executing  the program will respond to user input during the  wait  period  while an integration is going on  Caution should be used  however  that one does not do something  that will disrupt the command file execution  For example  if one did an OBS  Next Dos Shell  the  program could not complete the observation  Also  all commands in the command file must execute  from the OBS  main menu  so if one happened to be somewhere in the program where it couldnt  reach the main menu easily  the commands would not be executed properly  The safest approach is  to avoid doing anything while the command file is executing     It is possible to hold or stop a command file execution  One way it can happen automatically is if an  unexpected error is encountered  such as an invalid command in the command file  or if some file is  not found  etc  The program displays a warning message with the error  then stops command file  execution  The user can also manually halt or hold execution of the command file  If an observation  is in progress  the user can use the OBS  Wait Hold command
56.  Refres Clear Save OBS UTIL PRN Quit  Obs  Mode   Grab Log Sav  On Off               0 50 Filtr 1  8 8 pn  Chop    Hz5   4 92  amp AMBTemp  189 37 Off Dec   0 50 Filtr 2  Open  FrTime ms   4 369 LN2Temp  312 51 EleTenp  189 37 Filtr 3  Open  IntTimecs   0 28 DetTemp  297 890 A DTemp  189 37 Wavelth  8 80             3500 4500 i112   Section Full Map i    T    Data   Max 2033 75  lt  12  36  Dmin     1202 63  lt  5 121   Fit   Max  0 00  lt  0 00  0 00 gt  FWHM  0 00  ChiSa  0 000  Total RMS  356 41735 Avg  2 7779 Num  16384  Background RMS  356 41735 Avg  2 7779 Num  16384  Source Sum  0 0 Num      lt  05  Sky Flux  3370 8 RMS  1 24 DIF   0 7  Limits  A D  lt  5415  1320  FrameErrors  o  Flux MaxMin     5402  2165  BLIP  99 00 Lev  Medium  OutOfRange     3  0 gt   OBS  5 14 99 15 47 28   990514   007 UY AUR IDLE 0 00 0 00 0710000  DISP  5 14 99 14 18 10 45 d  test9905 c990514a 005 UY AUR Mode  Replay    Figure A16 2 The MIRAC Main Screen with the detector at room temperature    A16 7 Array Operation    The material in this and the next sections is taken from              2  a mid infrared array camera for  astronomy     W  F  Hoffmann  J  L  Hora  G  G  Fazio  L  K  Deutsch  and A  Dayal  Proc  SPIE   Infrared Astronomical Instrumentation  3354  647  1998     The HF 16 is a hybrid array with the Blocked Impurity Band  BIB  detector bump bonded to a large   scale integrated circuit readout chip  The array readout contains a unit cell circuit for each of the  pixels  Figure A16
57.  Table A14 1  The overall cryogen consumption is given in Table A14 2  The LHe hold time for  the cryostat vertical and unpowered is longer on a mountain top than in the lab because of the  lower LN2 temperature at the lower atmospheric pressure  The LHe hold time is reduced when  the LN2 slide is opened and the array powered  It is reduced considerably more when the cryostat  is tilted due both to loss of cryogen  if the reservoirs are nearly full  and convection in the LHe  neck tube     Table A14 1 Cryostat Capacity and Hold Time    Hold Time  hours     Capacity Level  inches  Fraction Fraction Quiescent Operating    liters  Full Empty Remaining 60 Tilt Lab Obs Lab Obs  LN2 27 24  57 0 30 x  5 7   level   90 36 36 36 36  LHe 3 7 T2 11 9  0 22 x  11 9   level   67 40 42 36 38    Table A14 2 Cryogen Consumption    Item Liquid Nitrogen Liquid Helium  Cooldown  24 hrs  12 liter 8 liter   Per Day 4 liter 4 liter   IRTF 6 Days Require 32 liter 28 liter   IRTF 6 Days Request 35 liter 40 liter     Storage dewar daily loss not included     184 MIRAC User s Manual    A14 4 Control Room Setup    The control room layout for MIRAC 15 shown in Figure A14 3  At the S O  2 3 m telescope the  PC should be located to the right of the Sun workstation near the telescope monitors  This makes  it easy for the MIRAC observer to see the TV guide camera and telescope control system  TCS   monitor  The A D interface box should be located nearby wherever it is convenient  At the S O   2 3 m telescop
58.  The MIRAC thermocouple gauge controller should be used with  the thermocouple gauge mounted on the cryostat to monitor the cryostat vacuum  If the pressure  is greater than 100 millitor  um   a roughing pump should be used to reduce the pressure to less  than 50 millitor before pumping with a diffusion vacuum system  In such case the cryostat  vacuum valve should be opened very slowly to avoid large pressure differentials in the  cryostat  After the cryostat is opened  it should be pumped with a diffusion pump for several  days  even weeks  before cooling down  The cryostat vacuum should go to less than 1 millitor   Thereafter  the cryostat will continue to outgas and must be pumped again before each cooldown   At the IRTF and UKIRT it should be pumped overnight using a turbo vacuum pump  Generally   the cryostat pressure rises to about 150 um after a cool down and warm up cycle  Occasionally  the molecular sieve on the LN  shield should be vacuum baked at 60 C  Figure   14 1 shows a  plot of a typical pump down after the cryostat has been opened  based on readings of the cryostat  thermocouple gauge     180 MIRAC User s Manual    10000      1000 4                                          100                                                 Pressure  mtorr     10          lt                       gt                             1  0 00 0 50 1 00 150 200 250 300    Time  Days     Figure A14 1 Cryostat Vacuum Pumpdown    A14 3 3 Liquid Nitrogen Cool Down    Before starting the L
59.  Using the MIRAC Program               53  S General Notes               da ge Ven ENSE CORP eo oA BTS        M go 53  8 2 Starting MIRAC            ON M EXE             Aw                      ES 53  8 3 Observing with MIRAC cine kd keds Gace ha e whe See ie         55  8 4 Shutting Down MIRAC 2 5255 ERRARE        ANE YE ARE 56  9  Using  the  MIB AC Progra  siere suga ved        RESTER Ro f          59  9 1 Running the MIRAC Program on a PC Stand Alone                         59  9 2 Directory Str  cture    i  sd exce race eor e a ise                 59  9 3 Data File Name Conventions                                           60  9 4  Main  Screen Display voce C ERE VAN                 RD SNE                 60  9 5 Using MIRAC Menus and Functions                                     64  9 6 Selecting Display Modes and Options                                    66  9 7 Setting Camera Parameters and Taking Data                               66  9 8 Filter Wheel Initialization and Motion                                    67  9 9 Observing Modes and                                                      67  9 9 1 Source Frames and Off source Beam                                  68             ioo aeo eH                        Re      68  9 9 4 2 Chop  oec ve ene RE SN                            68  2 9 153 C BOpINQUSS  522        Nora rado dedere dic pe o Spa eor ca CS 68  9 0  1 4 Nod  2 beam   5             SIE Sa eau 70  9 9 1 5 Nod  d  beam  eee odo eoe vere v eia e 70  99 
60.  about 20 nsec  characteristic of the CMOS chips used   LSYNC transitions occur at the rising edge of the FSTCLK wave form  The rising transition of  FSYNC occurs at the rising edge of LSYNC  To provide proper synchronization of the shift registers  and minimum reset time    FSYNC must be greater than   one LSYNC cycle and less than Gas  two LSYNC cycles  Reset is 1092 usec  inhibited when the reset T  MOSFET drain voltage  VDDR            gt   LINE SYNC UU                UUUTTUULU UU LUI UU UTI                                FRAMESYNC           is low                      proper            Inhibit Reset  synchronization for the burst RESET CTRL             VDDR  VDDR transiti s 2 FSTCLK cycles after FSYNC start   mode described below  the EID reb                 PCIE epe VORA Ta ETEN  falling edge of FSYNC must  or      25 is T36      O39  occur two FSTCLK cycles after Line Sync Cycles    one full LSYNC cycle    The  burst bode is achievediby Figure A16 6 Array timing with reset control for burst mode    using the reset MOSFET switch   drain bias  VDDR  as a clock to inhibit the reset during multi read integration as shown in  Figure A16 6  To achieve proper synchronization  the VDDR transitions must occur two FSTCLK  cycles after the rising transition of FSYNC  The array is clocked continuously and VDDR held low  to inhibit reset for some number of array reads during which the charge in the array builds up  For  the example in Figure 6  reset is inhibited for just one read 
61.  adapter 9 pin male to 25 pin female  Duct tape  Clear packaging tape  Aluminum tape  Computer monitor swivel  Clipboard for Observing Log sheets    CRATE7 CRYOSTAT  Gray Polypropylene 40x22x26h 103 Ibs 05 22 99     Cryostat with mounting plate with captured mounting screws  aluminum plate window  cover  LN2 and LHe vent fittings with tubes  electronics box mounting  screws  2 10 32 x 1 socket head  inserted in mounting    Connector caps with conducting foam should be on cryostat signal and clock  connectors   Pupil slide should be in f 15 position maximum stop size   Magnification slide  should be in 0 43 magnification position and actuator should be left  engaged  LN2 shutter should be open    LN shutter actuator and pupil actuator should be withdrawn from the cryostat   Top ethafoam protecting cover and bottom octagonal box protector should be in  place and cryostat enclosed in cardboard protective sheath and plastic bag   window up   Cryostat weighs 45 Ibs and is 28 inches tall    Rubber vacuum hose with two hose clamps  1 2 inch ID  8 inch length     CRATE 8 SUPPORT EQUIPMENT  Gray Polypropylene 40x22x26h 103 Ibs  05 22 99     Hotplate IR source  usually not needed  not packed   Cryostat Heater tape with AC cord  usually not needed  not packed   Varivolt AC supply  usually not needed  not packed   Electronics parts box  1  Cryostat disassembly parts box   Allen ball L wrench 9 64   Allen ball L wrench  090   Allen ball L wrench  076 ground end   Allen ball L wrench  050 
62.  amp A 334 5  detect variations in the distribution of the flux for this    source   Lambda Vel Var Var  Mu Cep Var Semi regular pulsating star    High variability and strong silicate emission make this rather unsuitable as a  photometric standard  Brelstaff et al   1997 JBAA 107 135  detect two periods  850   amp  4400d  from observations spanning 1959 1993  SiO maser is coincident with this    star   Mu Uma Suspected Var Spectroscopic Binary  Sigma Lib        Var    Variable at optical wavelengths  Barnes  amp  Moffett 1978 IBVS 1518 1     114 MIRAC User s Manual    Another possible source of fainter standards is from Hammersley et al   1998 A amp AS 128 207   This  list includes stars which are not variable according to the  Bright Star Catalog  with the exception  of Alpha Tau  This list  without magnitudes or annotation  follows     HR  Bayer Greek letter or Flamsteed         HR 1457 Alpha TAU         2077 Delta AUR   HR 2335   HR 2443 NU3CMA   HR 2459 Psi4 AUR   HR 2533   HR 2970 Alpha MON   HR 314528 MON   HR 3304 Phil CNC   HR 373828 HYA   HR 3834   HR 3939   HR 4094 Mu HYA   HR 4232 Nu HYA   HR 4335 PsiUMA   HR 4402 Epsilon CRT   HR 470170 UMA   HR 472866               495441               5315                          5340 Alpha                 5616 PsiBoo   HR 5622 Nu LIB   HR 6108 NulCRB   HR 615929 HER   HR 6705 Gamma DRA        denotes    standard listed in the Standard Star Tables     5 22 99 A3  MIRAC Filter Data 115    Appendix 3  MIRAC Filters    A3 1 Filter
63.  and E arrow pointing left  and the X and Y flip options are on   the output files will also have the X and Y flip applied  However  if the N direction is down  with all  other parameters the same  then the Y flip would not be applied  to put the final image in the proper  orientation  Then when displaying the image with another software routine such as IRAF  N will  always be up and E to the left  This is not quite true  however  if the axes of the array are slightly  rotated with respect to        and Declination     The program mrc2fts c is a stand alone program which performs the same FITS conversion    functions  and can be run on a Sun workstation  Appendix 7 provides a description of this program     12 6 DOS Shell    This utility allows limited access to DOS commands and small programs  There is approximately  400K available to run utilities  This is plenty for many commands  including COPY  DIR  CD   MKDIR  EDIT  etc  The computer should be returned to the O  drive before exiting the DOS shell   Typing  ret  or  return  from the DOS shell command line will execute both o  and exit to return to  the o  directory and to the MIRAC program     12 7 Unpack Fast Data and Ultrafast Data Files    This utility converts files in the fast data and ultra fast data format to image files that the normal  DISP  Load functions can process  The fast data file format has a single header followed by multiple  images  Each image in the fast data file is in the byte order as it comes dir
64.  beams and the pattern noise and the sky plus   telescope flux should be effectively subtracted out when the images are subtracted in processing   leaving no zero flux pattern noise or gain related pattern  However  as soon as there is an  astronomical object imaged on the array  a gain map is required to provide a valid image of the object     78 MIRAC User s Manual    If there were no pattern noise and the detector and readout were completely linear  then a single  image of a uniform background  suitably shifted so a pixel value of zero means zero flux and inverted   would represent a gain map and could be multiplied times the sky image to  flatten  it  This 15 often  done in the near infrared  However  this is not the case in the mid infrared  Also there is no practical  source of a single uniform background illuminating the array the same as the sky  The telescope   which dominates the background  will in general illuminate the array differently from the sky     So it is necessary to form a gain map for a given spectral filter  camera magnification  and focal ratio  from two flux levels  both of which contain the same flux from the telescope  The varying part should  pass through the telescope in the same manner as flux from the sky  Possible sources for this are  1  the sky at one and two airmass  2  the off source beam during observing at what ever range of  airmass occurs  and 3  the closed dome and the sky  with the same telescope orientation      The first two method
65.  cold stop using the pupil lens  also    Section A14 8       Select the a suitable wavelength  such as 8 8 um with the menu OBS  Next Wavelength  The  wavelength chosen must use filters located in wheels 1 or 3  Put the pupil imaging lens in position    5 22 99   14  Hardware Preparation and Setup 197    using OBS  Header Filters 2wheel H  pupil imaging   Set OBS  Next Chopper to Grab  The  large dynamic range from the cold stop to the hot flux through the pupil from the dome exceeds  the dynamic range of the camera A D  so the low level must be observed at Low flux range and  the high at High flux range  With OBS  Header Level set at High and a cardboard slipped in front  of the camera window  set the frame rate to give a reasonable flux level  Save a few of these  images using OBS  Next Save Yes  Also  save one of them with OBS  Save Current Image Save  as o pupilhi flt  Repeat with OBS  Header Level set at Low and the LN2 slide in place  Save a  few of these images along with one as o pupillo flt  Turn on the flat fielding with  DISP  Load Auto FField using pupilhi flt for examining the high flux and pupillo flt for the cold  stop     Remove the cardboard in front of the camera window and open the LN2 slide  The camera  display should show clearly the sharp edge of the cold stop  at Low level  and the telescope  aperture with the secondary mirror as the entrance pupil   at High level  The dichroic adjustments  should be used to center the telescope pupil in the cold stop  
66.  connected to the test plug and  the electronics end of the digital cable connected to the electronics     OBS  Init Mode Header Next Run PERSE Save Tele DISP UTIL PRN Quit  Obs  Mode   Grab Log Sav  OnzOf f Off RA   0 00  Chop      gt       4 77                  23 34 Off Dec  0 00  FrTimetCms   19 661 EleTenp  25 32 Filtr 1  8 8 pn  Burst Mode  ON A DT emp  32 59 Filtr 2  207  IntTimets   0 20 DetTenmp  5 277 Wavelth  8 80       RAVUG  2 671  lt 5 gt          4                              er tt             10  Section Full                 Data   Max 1653 10  lt  727 33  Dmin  1071 80  lt  13  20 gt    Fit           136 54  71 94  3 00   FWHM  0 33  ChiSq 143 321   Total RMS   150 50338 Avg  1286  3231 Num  16384   Background RMS  150 48069 Avg  1286  3007 Num  16383   Source Sum  366 8 Num  1  lt         Sky Flux  2858 3 RMS  0 13 DIF   0 1   Limits  A D    3619   4 6 gt  LinMax  4190 FullW  7508 FrameErrors  o  Flux MaxMin     3225  2644  BLIP  99 00 Lev  Low OutOfRange         o gt   OBS   8 28 97 15 33 44 c970828a 001 lab IDLE 0 00 0 00 0 1000  DISP  8 28 97 15 33 38 12 Data not saved lab Mode  Current    Figure A16 1 The MIRAC Main Screen showing Array Test Pattern    5 22 99   16  Checking and Trouble Shooting 207    A16 6 Running with the Array at Room Temperature    The camera can be run with the array at room temperature by using the bias switch and bias values  given in Appendix 17  A room temperature image is given in Figure A16 2     DISP  Init      Header Begin
67.  crate number and the foam level which should be in place  when the item is put into the crate     Crate 1  Guider box  should be unpacked at the IRTF  not at UKIRT     Crate 8  Support equipment  should not be unpacked except for trouble shooting  service   and repair     Crate 9  Cryogenic transfer tube  is not needed on Mauna Kea            22  1999 Page 167    CRATE 1  GUIDER BOX  Yellow Fiberglass 18x34x22h 110 Ibs 05 22 99     TV relay optics spacers in envelop  90 inch   Guider box  in plastic bag   TV camera support shelf  IRTF   Guider box assembly  plastic box   Allen ball driver handle wrenches 1 4  3 16  5 32  3 32  Allen handle wrench with flat end 5 32  Allen L ball driver wrench 1 4  3 16  5 32  3 32  Open wrench 1 2 for IRTF TV locking nuts  Open wrench 7 16  Crescent wrench 100 mm  Allen L wrench 3 8 for guider box mounting  Guider box mounting screws with washers  6 1 2 12 x 1 5 allen   SO TV screws with washers  4 10 32 x 1 and 4 10 32 x 3 4 allen   IRTF TV mounting screw with washers  spare 1 4 20 x 1 5   Jeweler   s loop  for eye  for pupil focus and adjustment  Jeweler   s loop  for glasses  for pupil focus and adjustment  TV relay optics pupils  SO  067 or  072  IRTF  081 or  088    61 inch to 90 inch bolt circle adapter plate  kept at 90 inch telescope    61 inch to IRTF bolt circle adapter plate  kept at IRTF    MIRAC mechanical interface  kept at UKIRT    Guider box is not used at UKIRT     CRATE 2  CAMERA ELECTRONICS  amp  CYRO KIT  18x34x22h 100 Ib
68.  critical to have this right  Otherwise data will be overwritten     Note  Each data directory is a separate tar file    The program will prompt for a response that the entries are typed correctly and for a response  for listing the contents of the tape  after saving the new directories  to the file tarlistb txt or  tarlista txt  The file name A or B should be chosen corresponding to the tape A or B    The program will then proceed to backup the chosen directories  It can be left of the day  without operator attention     Alternative  If tape backup is not to be carried out or is complete  shut of PC  Monitor will shut  off with PC without using monitor power switch      Initiate Exabyte tape backup on facility computer or transfer of data to home computer if desired   Appendix 21      Photocopy log for this day  Put away setup and observing log sheets in 3 ring binder   Transfer cryogens  Appendix 15      NOTE  Items in the MIRAC Nightly Startup Tasks list marked with a bar  1   can be carried out  at this time in preparation for the next night     If backup finishes before leaving  shut off PC and monitor power     5 22 99 6  Nightly Startup and Shutdown Check Lists 37    12  Thunderstorm Precautions    If a thunderstorm or lightning is likely the following steps should be taken    1  Shut off power to camera and MIRAC computer    2  Unplug the camera power supply power cord and power strip for MIRAC computer     If a severe storm is expected    3  Dismount camera from tele
69.  depending on the data mode  When the header is saved  the program reads  the current time  calculates the airmass value  reads the temperatures and heater voltage  and updates  a number of other parameters  At the end of the integration  the image is usually displayed to the  screen  For normal observing when the integration time in each beam is several seconds  these  operations add no extra overhead because they take place while the camera is integrating  However   for very short integrations such as those intended to freeze the seeing motion or chopper jitter  the  header  file  and display operations can cause a significant reduction in duty cycle     The fast data mode was designed to increase the efficiency of the data taking process in this special  case of very short integration times  This mode is selected by selecting Fast Data in OBS  Mode   and setting the  How many Obs Run  to the desired number of images per fast data file  The  difference in this mode is that the data is saved in a file with a single header followed by many images   The data is saved directly from the array processor board without sorting to save time  and only the  last image of the set is displayed to the screen  This greatly reduces the overhead time for saving each  image  The data files saved in this manner are called  packed  files  and are designated by a first letter  of  P  instead of  C  as in the normal MIRAC data file naming convention  Section 9 3   Each image  set  Grab or Chop  
70.  detector    The MIRAC3 cryostat is shown in Figure 2 2  Reflective optics in the camera cryostat provide  achromatic diffraction limited imaging at a nominal scale on IRTF of  32 arcsec pixel  A 2D at 9 4        at a camera magnification of  43 with additional zoom capability from magnification  43 to 1 14   The camera cryostat contains three cold filter wheels with a 16  bandwidth filters at 2 2  3 8  and  4 8 um  a 4  bandwidth filter at 7 9 um  10  bandwidth filters at 8 8  9 8  10 3  11 7  and 12 5 um   2 6  bandwidth filters at 17 4 and 17 8 um  10  bandwidth filter at 18 0 um  7  bandwidth filter  at 20 6 um  an N band filter  8 1   13 1 um   and a CVF with 1 8  resolution from 7 7 to 14 5 um   A pupil slide provides for focal ratios of 1 15  4 16  1 32  1 36  and f 45 for the MMT  SOFIA  CTIO  4 meter  IRTF UKIRT  and Steward Observatory 2 3 meter telescopes     Digital and analog electronics mounted at the cryostat provide for single and double read with a  minimum pixel sample time of 1 07 usec and a minimum full array read time of 1 09 msec  The array  can be read out in continuous or burst mode  with frame time  on chip integration time  up to 256  read times  Hard wired arithmetic units provide for fast coadding of up to 4095 frames before  sending the images via an optical fiber to a digital array processor  DSP  in a Pentium PC  A sub   portion of the array in units of 1 4x1 4 of the full array can be chosen for coadding and transmitting  to the PC  Full array 
71.  dichroic adjustment  collimation of the camera with the  telescope   The first and most direct method is to use the MIRAC3 pupil imaging lens and to  align the image of the telescope secondary mirror to the image of the camera cold stop  The  second method is to utilize the contrast between the cold sky around the secondary mirror and the  warm mirror cover or dome as viewed by the secondary  Both methods require the camera to be  running  Section 5 2  and can be carried out during daylight or at night  The dome must be open  for the second method  An open dome will yield greater contrast with the first method     The dichroic is a 45 degree IR reflecting mirror in the guider box  It is adjusted with two multi   turn dials are on each side of the guider box  These are marked  Dichroic RA  and  Dichroic  Dec  based on the assumption that the camera is camera is aligned with the window either North  or South  The adjustments each tilt the mirror  0047 radians turn  Hence  in the North South   declination  direction  the beam will move  0094 radians turn and an 1 45 beam   022 rad  will  move its diameter with 2 4 turns  In the East  West  R A   direction  the beam will move  0094 x  sin z 4     0066 radians turn and an f 45 beam will move its diameter      3 3 turns     A14 11 1 Dichroic Alignment using Pupil Imaging Lens  The pupil should be properly set as described in Section A14 8  The magnification should be set  to the 0 8 position to put the detector at the focus of the
72.  editor from the DOS shell    edit   filename     enter     When a macro encounters an unusual or unexpected condition  a warning message appears and the  macro terminates execution  For example  if the macro is about to overwrite a pre existing file  a  warning message will appear on the screen and control will return to the keyboard to choose whether  to overwrite the file  The macro will not resume operation  Also  macros may be terminated when  executing by pressing the Alt F1 key     Current assigned macros are     Fl Print Execute Print and return to Obs  command line  The printer  Postscript file or  postscript printer  is set in PRN  Init Printers    F2 SaveFits Save currently displayed image in Fits format to data and backup directories  The  first letter of the file name is  F  instead of  C          Findstar For finding an object or focusing  Mode  chop  Int  0 5 sec  How many  100  Save    off  Read offsets  off  Command  off  Zero current position  Run   F4 Stdparm For standard star observation  Mode  chop nod  Int  5 sec  How many  2  Read  offsets  off  Command  off  Save  off  Zero current position  Ends at  Source name for updating  If required  command file must be turned on in  Obs  Next menu  Start observation with F10  Savrdrun      5 22 99 7  Observing Procedures and Check Lists 43    F5 Objparm For observing program object  Mode  chop nod  Int  12 sec  How many  2   Offsets  off  Command  off  Save  off  Zero the offsets  Ends at Source  name for updati
73.  files to the disk in the  current directory  automatically  creating subdirectories if the original  data saved were in subdirectories     tar tvf  dev rstl list the files on a tar tape    5 22 99   21  Tape Backup 237    mt  f  dev rstl rewind rewinds the tape for unloading if automatic  rewind has not been used     allocate  d stl frees up the drive for the next user     To unload the tape  press the button and wait about 30 seconds for the door to open  Remove  tape and close the door     Saving multiple files on a tar tape is possible but not for the faint of heart  There is no end of tape  marker  or any protection against overwriting an existing tar file  One must manually space to the  end of the tape to begin the next tar file  For example  if one file has been written and no rewind  has been performed  the next  tar cvf     can be issued to write the next file  If at the beginning of  the tape  one issues the command mt  f  dev nrst1 fsf 1 to space forward 1 file   Replace the last 1 in the command to space forward any number of files  Then the next tar  command can be issued  Using  tar tvf     to space forward while showing the tape  contents can also be done  but this command does not actually go to the next file  The tar  command processes the file to the end  but does not go beyond the End of File  EOF  marker at  the end of the tar file  One must still execute the mt  f  dev nrstl fsf 1 command to  space to the file  However  this command must simply move over
74.  flux levels by using the  same camera settings  Also  since residual pixel levels after resetting once will be dependent on flux  level  it is best if the camera has the capability of multiple resetting at the start of each frame     The gain map  which is multiplied times the image  is formed from the reciprocal of the difference of  the images at the two flux levels  normalized to a mean of unity     It goes without saying  that the astronomical images must also be obtained within the linear range of  the array  or all this is for naught     5 22 99 11  Reading Stored Data and Data Processing 79    11  Reading Stored Data and Data Processing    The two basic steps to see stored data is first to load it in  and secondly to display it using the desired  display option  The method of reading in data will depend on whether the image is a processed map  or raw data  and if multiple files are to be combined in some way to generate an image to be saved  and displayed  All data that is read in is stored in the program   s map display buffer  From that point  it can be displayed  and saved to a file in the map format  or if it is raw data  saved to a raw data  format file  The difference is that the raw data is in 4 byte integer format and stores each separate  frame  off source chops and nods  before and after reset samples if in Dble2Samp mode   whereas  the map files are in a 4 byte real format and store one number per pixel  the result of all the off source  subtraction and sam
75.  for fiber optics cables  Couplers for fiber optics  4   AC ground isolation adapter plug  Tweezers  2   Paper clips  BNC T s and barrels  RS232 transerv transceiver  UKIRT   Centre Com Network transceiver  9 volt battery  Camera setup  plastic box   Allen L wrench 3 16  Allen L wrench with flat end 3 32  Allen handle ball driver 3 32  Allen wrench set  Screwdriver  1 8  for cable strain relief screws and pupil adjustment  Jeweler s screwdriver 1 8 inch  Plastic jar with electronics box cover plate screws  Spare cryostat mounting screws  2 socket head machined     5 22 99   13  Shipping Procedures        Shipping Inventory 171    End covers for fiber optics cables  Tweezers  Spare optical fiber cables    CRATE 6  MONITOR  Yellow Fiberglass 18x34x22h 99 Ibs 05 22 99     Computer monitor  in plastic bag   swivel base removed   Notebooks and folders  4 inches   Log sheets 3 ring binder  Current log 3 ring binders with dividers No 1 and No 2  MIRAC Design 3 ring binder  Current results 3 ring binder  MIRAC Users Manual  here or in travel kit   Current logistics folder  here or in travel kit   Current observing proposals folder  here or in travel kit   Airmass lists  here or in travel kit   Object lists  here or in travel kit   Computer items plastic box  Disk cleaning kit  3 1 2  D connector  RS232  25 pin gender changer  D connector  RS232  25 pin cable matcher  Ribbon cable 25 pin RS 232 20 feet  spare   Telescope command RS232 cable 15 feet  for S O  and UKIRT   RS232 standard
76.  min  3 sec  for   on source  off source nod can be 1 sec if object only in one nod beam     H eader  O bs Parameters  N od and chop parameters  Turn on the Chopping Secondary Mirror Control Panel Power    8 3 Observing with MIRAC    8 3 1 Acquire standard star  eg alpha Boo   Set Next parameters  these are set for every run   Wavelength 8 8 microns  Frame time 8 msec  The following parameters are set automatically by the function key F3  Number of observations  100    56 MIRAC User s Manual    Short integration time eg  5 sec  Just Chop  no Nod   Dont save  No offset file  No command file  Offset systematically until object found  eg 30 arcsec S  30 arcsec N  30 arcsec E  30 arcsec W   Field of view about 45 arcsec   Check sky flux   should be close to the upper end of the linear range  shown on the screen  with no pixels out of range    8 3 2 Focus on standard star  Set Next parameters  as above  this can be done with F3   Short integration time  Chop Nod  Dont save  Record FWHM values for each focus setting   choosing lowest FWHM  values for focus     8 3 3 Take images of standard star  8 3 4 Acquire object of interest    etc  etc     8 4 Shutting Down MIRAC    8 4 1 Make sure you are not taking data  W ait  E nd    8 4 2 Power down  Turn off Chopping Secondary Mirror Control Panel Power  Camera Electronics Power OFF  right switch on Power supply   Temperature Monitor Power OFF  left switch on Power supply     8 4 3 Quit Mirac  Q uit  Yes    8 4 4 Log file  Copy the log fi
77.  of decimal  places  type scale 2 number     dd to delete the entire line the cursor is on    dw to delete the word  or portion of word  under  and after the cursor    h to move left  or  west   one character   i to insert text under the cursor  enters insert  mode    1 to move down  or  south   one line   k to move up  or  north   one line   1 to move right  or  east   one character      to insert text      a new blank line after the    current line  enters insert mode     O to insert text on a new blank line before the  current line  enters insert mode     5 to substitute a character with a string  enters  insert mode     x to delete the character under the cursor  iq to quit vi   4  to quit vi  without writing changes        to save  or write a file    5  Formatting Files    Construct source file to run through nroff formatter   including any of the following commands          to left justify a paragraph            tocreatean itemized paragraph  like this one        to center text on the page    ul     to underline portions of text   5      create a blank linespace             force the end of a line  a linebreak    230 MIRAC User s Manual    To format the source file  type nroff  ms source   filename  You will probably want to redirect the  output of nroff into a destination filename   so you can  print it out afterward     6  Search Files  Type    grep search string filename to type out lines  containing the string in a specific file    grep search string filename s  to 
78.  of the pupil to center it on the secondary image   Tighten the clamping plate screws     Step 3  Using a jeweler s loop to view the pupil and the image of the secondary created by  the TV relay optics  adjust the position of the pupil mounting plate to provide  simultaneous sharp images of the secondary and the hole in the mounting plate  A good  check for this is the absence of parallax motion between the pupil and the secondary  image  The adjustment requires a 5 32 allen wrench to loosen the small screw on the  underside of the relay optics assembly     196 MIRAC User s Manual    Step 4  Reexamine the pupil and secondary image with the loop to confirm that the pupil  is well aligned  Repeat Step 2 if necessary  Check with the relay optics mirror in both the  high and low magnification positions  The high mag and low mag dials can be used to fine  tune the pupil alignment with the secondary in the vertical direction only     Step 5  Mount the TV camera     A14 10 Telescope Balance    Balancing of the telescope is carried out by the operator  All MIRAC equipment  cables and  cryostat and the facility TV should be mounted first  The balancing requires slewing to dec and  hour angle extremes and can result in some loss of cryogen  At the IRTF and UKIRT  the  balance will depend on what other instruments are mounted on the telescope     Previous balance weight settings should be in the telescope operators log     A14 11 Dichroic Alignment    There are two basic methods for the
79.  ol 9  Check Observing Parameters  Obs  Header Observing Parameters    Chop frequency 1 10 Hz  Nod and Chop Parameters  Nod wait 2 sec  5 sec for UKIRT 20 60  guided nod  6 5    sec for larger UKIRT nod  4 0 sec for UKIRT    5 22 99 6  Nightly Startup and Shutdown Check Lists 33    unguided nod  Check UKIRT telescope control  parameters  Section 5 2  Start of Run setup  Item    15     Off src nod wait 2  same as nod wait when object is in both nod  beams    Wait time for chop 6 6 msec  minimum of 2 reads      lt esc gt   NOTE  There is a minimum chop wait reads which is set to 1 when the program loads and  can be changed in OBS  Init Program Values Min Chop Wait Cycles    Ol 10  Check display settings  NOTE  The macro F6  Dispparm  can be used to make all the display settings     Disp  load   Mode Current  Data format MIRAC  Load Auto   Mask on   Gain off   Ffield off   Default mask e g  bad1126 msk    e 11  Save the current parameter settings  Obs  Init Mirac Settings File  Save Header   Current hdr    enter   yes    esc    This should be repeated occasionally during the night to assure that current hdr contains up to   data parameter settings     e 12           Power up the camera    The MIRAC program should be running and MIRAC power supply temperature monitor switch  should be on  Confirm that the detector temperature is below 10 K  It should be 3 9 K at  the summit of Mauna         4 3    at sea level  Do not turn on camera power if detector is not    properly cold      
80.  read in  before doing any math operation    The following operations between files are supported  addition        subtraction        multiplication         and division        Also  the same operations can be used with scalars and images in  combination  The operation is performed using temporary image buffers  and then the result is stored  in the main map display buffer  Parenthesis are allowed to specify order of operation     5 22 99 11  Reading Stored Data and Data Processing 81    The following are some examples of operations that can be performed between raw data images   1  Add three images  number 5  6  and 13    5        13    2  Multiply image 5 by 17  and subtract image 11 divided by image 3   17   5   11   3    3  Multiply the difference between images 7        9 by image 15    a7 a9  al5    11 1 5 Mosaic    This mode generates a mosaic of individual observations  taking into account the offsets between the  observations  There are two decisions that must be made before running the mosaic mode  First is  the choice of offsets used  and the second is the source of the files to read in  The offsets can come  from one of four sources  the offsets stored in the data file header  calculated from the data in the  observation file  read from a text list file that was previously constructed by the user  or typed in  from the keyboard as the images are being combined  The calculated offsets can either be based on  the peak value in the map  or the centroid of the region 
81.  set for the calculation  The result of the calculation is stored in the default display image   overwriting any current image being displayed     12 12 Display Image Arithmetic   This allows certain math operations to be performed on the data that are currently in the image  display buffer  Only the data in the buffer is altered  the image must be explicitly saved if the image  on the disk is to be affected  The following operations are supported     Add  Subtract constant   a real value can be added or subtracted from each pixel in the image     Multiply  Divide by constant   each pixel in the image can be multiplied or divided by a real scalar  value     Invert map   each point on the map  p i j   is set equal to a new value P 1 j   where P 1j    1 0 p i j      Justify map   the data in the array are shifted so that the starting coordinate of valid data 15 at the  origin   1 1      Boxcar Smooth map   the image is smoothed using a smoothing window of adjustable size  Every  point on the new map is the average of all the pixels on the old map enclosed in a box the size of the  smoothing window  centered on that pixel  For smoothing windows whose size in pixels is an even  number  the resultant map will be shifted by one half pixel towards the origin     98 MIRAC User s Manual    X  Y flip   the image is flipped in X or Y  Two successive flips will  unflip  the image  Performing  an X and Y flip is equivalent to a 180 degree rotation  If the user wants a map to appear in the
82.  should not be a big problem     5 22 99   5         AIRMASS Program 123    Appendix 5         AIRMASS Program    The program AIRMASS EXE and its C source code AIRMASS C are in the C  MIRAC directory  on the MIRAC PC  The compiled C program can also be obtained from the MIRAC home page on  the WWW  Section 2 1   This program produces a listing of the airmass of objects to use as a guide  to observing  The input to this program is a source file with the same format as used by MIRAC and  by the Steward Observatory telescope control system  ALL CAT  YSO CAT  etc    The output is  a text file  e g  PNAMS TXT          MIRAC directory contains the WordPerfect file   AIRMASS WPW  to format this text file for a post script printer     If the TYPE field has been used to designate the type of object  then selection of the objects to  display airmasses for is possible  For example  it is often convenient to have a list of standard stars   and a separate list for objects  Usually the airmass of the SAO reference stars are never required   since they are so close to the object airmass  The following types have been defined     STD   Standard Star QSO   Quasi Stellar Object  SAO   SAO catalog star HII   HII Region  PN   Planetary nebula DSH   Dust shell  around star     PPN   ProtoPlanetary nebula AGN   Active galaxy nucleus  SFR   Star forming region YSO   Young stellar object   GAL   Galaxy SBG   StarBurst Galaxy  MCD   Molecular Cloud    Currently  only the STD and SAO types are recogni
83.  shown for the background  defined as all pixels not in the source  If  DISP  Init Stat Fit is set to none  then the source is taken to be all points some factor above the noise  sigma  which is determined iteratively from the points not in the source     The sky flux is the mean of the array for the off source beam  offset so that a zero value corresponds  to zero flux  regardless of the flux level set in OBS  Header Observe Fluxlevel  The nominal offsets   set in OBS  Header Hardware Offset Values are 1572  3368  and 6058 for the three levels low   medium  and high         full well flux  nominally 7508  and the parameters for the sky linear max are  also set in this menu     The SKY RMS value is the standard deviation of the current and previous five flux measurements   The SKY DIF is the difference between the last two  This line provides a monitor of the sky and  telescope brightness and their variation  quickly indicating presence of cirrus clouds or increase in  water vapor in the atmosphere  Under good conditions  the sky flux should not vary by more than  a fraction of a unit between consecutive images     The flux limits are the A D limits shifted by the offsets described above  The flux maxmin are the  extreme values of the flux  which should be within the flux limits  The sky flux should be less than  the linear max which depends on the frame time  a high dark  taken to be that for the 10th highest  dark current pixel  and the signal level at which the array start
84.  sided for multiple records of the run or scanned into a computer for a digital facsimile record   Individual nights can be photocopied separately for different observing projects     CRYOSTAT    The cryostat sheets should be the first pages of the log for a run numbered 1a  1b           Use the cryostat sheet to record cryostat disassembly and maintenance   cryostat vacuum pumping  cryostat cryogen levels  expected hours until empty  and  fills  and LHe supply dewar level     WORKSHEET Use the worksheet for trouble shooting  recording camera bias voltages and preamp    SETUP    OBSERVING    offsets  and calculating sensitivities and telescope emissivity  This can also be used  for notes taken when adjusting the dichroic  focusing  and measuring the pixel scale   although these can also be recorded on observing sheets     Use a setup sheet at the beginning of each observing night  Complete   Accomplishments and Problems  at the end of the night  Day is the sequential day  of the run starting with 1  It can show the  first  and  last  day of the run  The local  date is useful since the telescope observing schedules are in local time and the  daytime activities are usually in local time  Giving the local date explicitly reduces  the chance of confusion between UT data and local date  Many of the items  such  as directory and file names  display flips and orientation  IR magnification  and chop  and nod parameters are reminders to enter these items in the MIRAC program  header  
85.  such  as the bias rates  wobble vectors  offsets  etc  can be typed in from the MIRAC computer   Commands can also be issued  such as  Move to next  and turning the tracking on and off   Information on the function and use of these commands for the S O  2 3 m telescope can be found  in the manual by Comsoft   PC TCS version 3 5 dcs Users Manual October 1992   Information on  the UKIRT version can be found on the WWW site     The most important capability of the control system  however  is the offset commands that MIRAC  can send directly to the telescope computer  This allows the user to enter the offsets to be used to  obtain the images that can later be combined to form the mosaiced image  The offset information is  stored to the header of each observation file  as well as written to the observing log file  To actively  control the telescope offsetting with the MIRAC program  the  Control Telescope offsets  flag must  be turned on in the OBS  Telesc Telescope Control submenu  If this flag is off  then the offsets  entered are stored in the observation file headers  but no commands are sent to the telescope  the  Observer would have to move the telescope by hand     9 10 3 Ethernet Control of the Telescope    At the IRTF  the telescope can be sent commands via Ethernet  Two external DOS programs are  used  BEAM EXE and OFFSET EXE  These programs are run automatically by MIRAC to establish  connection with the IRTF TCS and to pass the necessary parameters  such as the nod be
86.  taken over no more than one hour are bracketed by observations of the  standard before and after for the same filter  This also gives an indication of any drift in the  calibration  Depending on the sky conditions  one may have to switch more often between source  and standard  to remove effects of a rapidly changing sky     It is also preferable that the standard star be at a similar elevation  to minimize the effects of airmass  correction  To derive the airmass correction  a standard star should be observed at several different  airmasses throughout the night at each wavelength of interest  Assuming that the sky is relatively  stable  this will give an indication of the transmission of the atmosphere as a function of airmass  An  alternate method is to observe two separate standards  one at a low and one at higher airmass  This  method  however  is dependent on accurate previously measured fluxes from both standards     If the standard star observations are to be also used as a measurement of the instrumental point  spread function  PSF   then some attention should be given to making the star observations in a  similar way as the source observations  with a number of offsets  Otherwise  the PSF of the star will  not be an accurate estimate of the PSF on the source  There are a number of factors which affect this   integration time per observation  number of observations  source flux distribution and brightness   telescope drift  offset errors  method of aligning the image
87.  temp too high the cryogens have run out  need to refill    8 2 5 Set up data directories in MIRAC   Note  type   space   to edit an existing directory path    lt backspace gt  to delete the existing path and type in a new one    O bs  I nit  D ata file directory  d  dY YMMDD   cr    your main data directory path   B ackup data directory  jd YYMMDD   cr    backup data directory path     esc      8 2 6 Check your source   enter catalog file and source name  H eader  5 ource Parameters  L ist of sources   enter catalog file name   S ource Name   enter source name   F ind source in list  will update the info for your source     esc      After catalog file is entered  the source name can be entered in the  O bs  Next menu  and it will automatically search the source file for the coordinates    5 22 99 8  Short Form Instructions 55    8 2 7 Turn on the camera  Turn on the camera switch  right switch  on the MIRAC power  supply  Wait until the fan comes on  the red light will come  on   Check that the data I O light on the PC comes on     8 2 8 Initialize the camera  I nit  I O  Y es  C amera  Y es    esc      8 2 9 Initialize the filters  N ext  W avelength  P Home all filters  Y es   takes half a minute   the camera must be on     8 2 10 Set up Chop and Nod   The telescope operator sets up   Chop throw  eg 60 arcsec  N S   Nod throw  eg 60 arcsec  E W    Set chop frequency in MIRAC  H eader  O bs Parameters  C hop frequency   Set Nod and chop parameters   set wait times for nods 
88.  test pins  The nominal bias  voltages and cable pinout are given in Table   17 1 The biases can be adjusted by removing the  cover of the bias box     206 MIRAC User   s Manual    The clocks can be checked by running the camera without the cryostat  Section A16 5  and using  an oscilloscope to probe the digital cable connector  Table A17 1      A16 5 Running the Camera without the Cryostat    The camera can be run without the cryostat for testing the electronics and computer operation   For this test  the camera electronics signal cable  which normally goes to the cryostat  must be  connected to the test signal connector at the top of the electronics unit  This is the way that the  camera is normally shipped   The top cover plate must be slid back to access this   The digital  cable should be connected at the camera electronics end  but not at the cryostat end  The test  pattern is shown in Figure A16 1     The test signal runs with a 4 step pixel cycle  low low high low  with a superposed two step 128  pixel cycle with the first 64 high and the next 64 low  The center and spread are adjustable with  the edge pots on the controller circuit board  With Obs  Header Hardware Reorder off  the  pattern will appear as described with 32 sets of horizontal bands  starting with the second pixel in  the cycle because of the AD sample timing delay  With reorder on  there will be 4 sets of bands              WARNING        Do not run the camera electronics without the signal input cable
89.  test probes with hook grip ends  2   Ball clip leads  2   missing   Coax test cables with miniature female connector and BNC  2   Coax test cables with miniature male connector  Twisted pair signal processor test leads with connector  3   Allegator clips  BNC adapters and T   s  Candle and book matches  Short 50 pin ribbon cables for Foxy board in computer  2   A D  2   spare   Qtips  Monitor AC cord  Spare instrument AC cord  BNC cable 12 feet  Ribbon cable 25 pin 20 feet printer  not normally used   Foxy termination board with connectors  Spare cryostat window  Small plastic box  Spare camera electronics signal processor card  Camera electronics extender card  PC extender card  Bias monitor card  Box of spare dichroics  Component data sheets 3 ring binder  CONTINUED    CRATE 8 SUPPORT EQUIPMENT CONTINUED 4 of 4    File box with working drawings folders  Analog Digital I O box  Bias amplifiers  Cables and backplane  Computer  Controller  Cryostat and optics  Cryostat assembly  Data Command link  Detector and Dewar Wiring  Detector Information  Filters  Filter Motor Controller  Guider box  Labels  Preamp  Power supply  Signal Processor  Spare Parts  Temperature Controller  Timing   Circuit board foam pad    CRATE 9 CRYOSTAT TRANSFER TUBE  Carton 21x8x75h xxx lbs 05 22 99     MIRAC LHe transfer tube    90 INCH ONLY  05 22 99     LHe transfer line   LHe storage dewar level sensor   Oscilloscope with test probes and long BNC cable  Infrared catalog  two volumes  Gezari and Mead
90.  testing     The departure time provides for a morning   s sleep  an afternoon for packing  and a night s sleep     5 22 99 3  Observing Run Arrangements 15    IRTF Observatory Arrangements        The basic arrangements are specified in an IRTF form which must be filled out six weeks prior to the  run  This includes observers  observers to be subsidized for lodging and meals  2   arrival and  departure schedule  and instrument and cryogen requirements  The usual cryogen requirements for  two days of preparation and four nights on the telescope are 32 liters of LN   12 liters for cooldown  plus 4 liters day for 5 days  and 42 liters of LHe  12 liters for cooldown and 6 liters day for 5 days   including transfer loss and   liter day boil off   Special requirements include our bolt circle interface  plate in storage at the IRTF  use of gaseous nitrogen the first day at the observatory to remove the  precooling LN  from the LHe reservoir  a table along the computer room wall for setting up  a quiet  power strip  a thin Ethernet connection with transceiver to thick cable  a telescope control paddle   intercom microphone  two monitors for the telescope status and guiding video  and BNC cable from  the telescope chopper external reference input interface box  This information is given in the IRTF  requirements list in Section 3 3     The form can be found on the IRTF home page  http   irtf ifa hawaii edu   Direct email contact may  be made with    IRTF director  Bob Joseph in the Ho
91.  the EOF marker  so is executed  almost instantly     A21 3 2 Steward Observatory Tar Macros    At the Steward Observatory 2 3 m telescope are three macros  tarwrite  tarread  tarlist  and  deallocate  which take care of the various opaque command line parameters required  The tar  macros are also in the MIRAC directory of the camera PC and can be transferred to the unix  computer if desired  The following commands use the macros  The name of the tape drive  mtc   mtf  etc  should be marked on the unit     allocate mtc to allocate the tape drive  deallocate mtc to deallocate the tape drive at the end of backing up    The drive can be allocated before or after loading the tape  To load a tape push the black button  on the front of the drive to open the drive door  In about 30 seconds the door will open  Insert  the tape  close the door  and wait about 30 seconds for the green light to come on     tarwrite writes entire current directory and subdirectories to a tar file on the  tape  overwriting any previous information on the tape  The macro  then reads back the contents of the tape printing the file names on the  screen and in a log file named tar log  located in the current directory     tarlist reads contents of tape and creates the log file tar log     238 MIRAC User s Manual    tarread reads the contents of the tape back to the current directory on  disk  overwriting any pre existing files with the same names     5 22 99 A22  Weather and Tau Information 239    Appendix 22
92.  the file aml    9           the list to the file am2    10  Edit the file to contain only those file names which are 11 7 um grab  observations at 1 00 airmass    11  Edit the file am2 to contain only those file names which are 11 7 um grab  observations at 2 airmass  actually 1 5 airmass in this case     12  Construct an average of the 1 airmass grabs  store it in aml 117    13  Construct an average of the 2 airmass grabs  store it in am2 117    14  Subtract the 1 AM image from the 2 AM image  store the result in gainll7    15  Do statistics on the image to find out the average  mean  value    16  Look at the image  make sure it looks  reasonable     17  Divide the gain map by the average value  This normalizes the image so  the average value is 1 0  to change the data values as little as possible  from their original  counts  values    18  Invert the gain map so that it can be used as a multiplicative map by the          programs that need it   19  Do statistics to make sure average is now 1  and check standard deviation           20     21   22   23   24   25   26     Dykes  28     29     30     3L  32     33    34     35     36     5 22 99    Some points        below zero   eliminate pixels that are much larger than 1   non responsive and negative pixels    complet  Divide gain map by 0 5   truncated to the nearest integer   to a value of zero    If there were negative values    One can do the following  decide what the minimum  be  say 0 5   then    for example  take it
93.  the mirror aberrations as well as  miscollimation  But it is a useful check     3  In focus star image  Run as in part 2 but with the telescope in focus  Monitor the FWHM  and try to adjust the collimation to minimize the FWHM and optimize the image appearance   Since the image is affected by telescope aberration and seeing as well as collimation  this is the  least sensitive  unambiguous  and satisfactory method     4  Using pupil imaging lens  The illumination of the telescope aperture by a star and centering  of the secondary in the aperture can be observed with the pupil imaging lens  Section 14 11 1      A14 14 Setting the Telescope Nod Parameters    Step 1  At the Steward Observatory telescopes  make sure connection has been made from the  RS 232 port COM 1 on the MIRAC PC to the telescope computer connector in the control room   At the SO 2 3 m telescope  the connector is on a panel on the wall near the observer s monitors   At the 1 5 m telescope  there is a cable that runs from the back of the telescope control console   The special MIRAC telescope communication cable must be used  to allow the PC to interface  properly  Make sure the MIRAC program telescope COM port is set to COMI in the menu  OBS  Telesc Telescope Control  Proper connection can be tested quickly by trying to send     command such as setting the paddle guide rate to a certain value  The OBS  Telesc Telescope  control Offset control Command Tel  offsets flag must be turned on     Step 2  Set the nod
94.  three combined are typically  5 arcsec     2  The sensitivity is for signal to noise   1  1 sigma  in one minute elapsed time including chop  nod   and offset waits  with the source in one of the chop nod beams  The noise observed is produced by  shot noise from the telescope and sky background  detector read and system  A D toggle  noise   detector low frequency excess noise  and sky noise  Typically the total is 1 04 to 1 1 times shot only  noise     3  For a small source  the chop and nod throws can be set to put the source on the array in all beams   This gives an increase in sensitivity when these images are combined of a factor of 1 414 for chop   only and 2 for chop nod     4  Images can be co added for an hour or more of observing with the noise decreasing as the square   root of the time  However  if the source cannot be detected in a one to four minute observation  the  telescope must have autoguiding to provide satisfactory registration of the co added images     5  The sensitivities were determined using Gamma Aql  Beta Gem  and Beta Peg at the IRTF on  January 28  1997  At that time  water vapor in the atmosphere was high resulting in poor sensitivity  at 7 9  17 4  17 8  18 0  and 20 6 um  The 18 0 sensitivity is consistent with  40 transmission  and  corresponding  6 emissivity      6  For the UKIRT 3 8 m telescope  the pixel size is  27 arcsec  The diffraction FWHM is smaller by  a factor of 1 26 than for the IRTF  the surface brightness sensitivity greater b
95.  to be  1 2     imarith         117   1 2 temp    Then set to zero all pixels that were zero by doing         10  Reduction of MIRAC Data using IRAF    these are bad pixels        store as type     short     all        bad pixels               find what the lowest value of  Construct a temporary map by    imarith temp   1 7 temp pixtype short  imarith temp   temp temp     1 7      Th       122 0 5      imarith mask   temp mask    Divide mask by itself    are  Wri  Wri    Convert Alpha    and  Do    Read the FITS  Make a fil    Loo    name  making  Convert the    the fits files have a  f  as  the iraf images have    Do the cross correlation    the reference and window images     the  few       doing the peak eval   near 1 in all cases     successful    makelist to convert the cross corre     Run             the fil  Type the cross correla       zero and therefore una             mask images we just made   the airmass correction               pk200    the final image           n remov    to convert all  Ffected    te mask file to FITS file for use by programs   te gain file to FITS file for use by programs   Tau images to FITS    le containing the list of files to p  k at the files just read in   the peak and hit the spacebar   Make a note of any bad files     near zero   Several steps may be required to   the process of eliminating pixels and renormalizing the gain   which forces numbers to be  This causes all values   0 5 to be put  values  gt 0 5 are some positive integer   
96.  to temporarily stop reading the  command lines from the file  The program will continue with the current observations  then stop  when it is done  Execution of the command file can be restarted with OBS  Wait Resume      command file can be terminated by using OBS  Wait End or OBS  Wait Abort     Use of the LOADHEAD and the EM commands will allow the observer to do a wide variety of tasks  in a command file  For setting the camera parameters  the user would prepare a number of different  header files with all the desired values entered  Then a LOADHEAD and INITCAM will set up the  system exactly as requested  Using the EM command  the user can have the program do any desired  action that doesnt require interactive input  Note that all macros should be defined to start at the  OBS  command line menu     5 22 99 7  Observing Procedures and Check Lists 45    The command file mode is set up in the OBS  Mode menu  First  the file name is entered in  The  command file name   The full path should be given if the file is not in the default directory  Then the  selection  Use command file for Run  should be turned on  Then the OBS  Run command will begin  the command file execution     The command files can be listed from the DOS prompt with  dir   cmd   enter     and viewed with  type   filename     enter        edit   filename   enter    A number of macros have been created to assist with command files  These include frame time  macros  such as  frame33  and integration time macros
97.  to use this  Our back focus is  similar to NSFCAM     On axis Camera  Not required     Cryogen transfers  Only one a day will be required for MIRAC3  We would  like to have IRTF operators carry them out  at the end of each  observing night  with some new instruction for MIRAC3 from us     Shipping back to Tucson   MIRAC will be packed by Aditya Dayal  John Spencer  and Glenn Orton   Nov 23 24 Thu am immediately at the end of observing  We would like it  to be taken to FedEx the next day or so  We will provide shipping  papers     3 4 Cryogenics Cost   At the University of Arizona in Tucson  liquid nitrogen costs  0 50  liter and liquid helium  5 50 liter  as delivered in the storage dewar  At the Steward Observatory telescopes  there is no charge for  liquid nitrogen  Liquid helium must be purchased by the observer    At the IRTF  there is no charge for liquid nitrogen  Liquid helium is charged at the rate of   18 30 liter for the helium consumed during transfers  including transfer loss  There is no charge for    daily boil off loss  dewar transportation loss  or unused liquid helium     At UKIRT and the MMT there is no charge for either liquid nitrogen or liquid helium     18    MIRAC User s Manual    5 22 99 4  Software Preparation 19    4  Software Preparation    The following highlight some of the more important steps to take before beginning the first night of  the observing run  Some of these tasks should not take long  so they could be done on the mountain  after set
98.  vector in the telescope control computer to the desired value  This can be  done using the MIRAC program  or the telescope control computer  For an extended source the  nod should be 30 to 60 arcsec to the north or south  For a compact source  is can be set to  slightly less than half the field size to put both nod positions on the array  Be sure to set the R A   nod value to zero  if only nodding in Dec     Step 3  Center the source on the array position  and define the current position to be BEAM 1 in  the telescope control computer  Again  the telescope operator can do this function from the  telescope console     Step 4  Take a test integration in the NOD mode  to see if the link is working properly  Watch  the image motion as the nod is performed and evaluate how long it takes for the image to settle     5 22 99   14  Hardware Preparation and Setup 201    This time should be the entered as the nod wait time in the OBS  Header Observing Parameters  menu  On the Steward telescopes  2 to 4 seconds is a reasonable value     Step 5  If the MIRAC program control of offsets is desired  then turn on this flag in the  OBS  Telesc Telescope Control menu  Make sure the proper site and telescope are selected in the  OBS  Header Site and Telescope menu  and that the plate scale and camera magnification are set  to the proper value  the plate scale values are automatically entered for the SO 1 5 and 2 3 m and  the IRTF   Also  it is useful to have the  Ask for offsets  flag set  whic
99. 0 285 231 210   2411 1037 909 718 664  2346 876  892 751 689  595 231 188 160 145  552 215 176 145 131  552 172  295 114 926 765 69 5  3616 2013 1716 1432 1362  459 191 155 134 121  443 156  158 608 495 402 365  158 49 5  7282 4830 3930 4404 4386  5731 3499 2847 2534 2302  2081 920 770 637 584  2024 749  763 673 622  828 384 312 265 246  813 301  306 270 252  443 187 152 120 109  431 151  154 126 115  1197 581 473 405 368  1197 439  468 402 375  523 242 197 198 178  573 258 218 192 175  279 116 943 824 748  97 84 78  2620 1096 1092 895 821  477 201 164 151 139  9083 46124 37534 44042 40002  431 133 10 8 816 7 35  1092 731 1034 1923 1915  301 135 117 964 883  573 265 216 175 159    10 6 117 125 135 174 178 18 20 6  284 261 235 155 149 145 1141  571 507 440 277 265 260 199  163 143 123 743 711 695 533  545 488 420 246 235 230 177  620 521  540 475  108 102 878 436 417 408 313  102 864 717 473 453 443 340  119 98 3  540 488 420 246 235 230 17    1238 1150 1126 678 648 634 486  90 5 905 779 514 448 43 9 2337  115 98 3  284 249 215 129 124 121 9 3  344 28 4  4493 3951 3401 2577 2465 2411 1849  2151 1891 1785 1074 1027 1005 771  471 421 363 220 21 206 158  555 479  502 441  211 186 148 804 855 836 64 1  227 198  205 182  872 746 642 394 376 368 283  106 87 2  90 5 80 3  286 252 235 142 135 132 102  326 281  207 261  131 108 928 743 711 695 533  142 130 112 678 648 634 48 6  592 521 457 275 263 257 197  61 54  674 598 515 310 296 290 22  113 992 1027 618 591 578 444  31087 39510 340
100. 0 70 00 lObservatory  C  Wlth  8 500 70 00  Telescope            RAAR     Plate Scale    mm   Ps         9 000 ca  Site Latitude  E  Wlth  9 500 70 00  Longitude of site      Wlth  10 000 70 00 L  G  Wlth  10 500 70 00  H  Wlth  11 000 70 00  I  Wlth  11 500 70 00  J  With  12 000 70 00      Wlth  12 500 70 00  L  Wlth  13 000 70 00      Wlth  13 500 70 00  N  Wlth  14 000 70 00      Wlth  0 000 0 00  P  Wlth  0 000 0 00                              Sites     A  Kitt Peak      Catalina  C  Mauna Kea  D  Cerro Tololo  e  Mt Hopkins  F  Other Site Other           Telescopes            SO 2 3m  SO 1 5 m                     4 m  UKIRT  MMT  Other  F Data Files    Data File dir  d  d941229    Backup Data Dir  i Nd941229    Gain Matrix    Flat Field    Mask file o bad1106 msk_                 149    150 MIRAC User s Manual    A12 1 4 OBS  Next                        Observation  2 2 2 2     Object Name ALPHA BOO  Wavelength 8 800  Integration time 5 086  Frame Time  ms  17 4763  Chop Nod Mode Chop Nod  Save all observations Off  How many Obs per run 2  Read offset file Off  Use command file Off  Link Frame Filter Off  Macros   gt     DOS Shell  Zero current position                            Filter Selection       4  A  2 2K  16   W2      3 81   16   2      4 8    16   2  D  7 9Me  4   W1  E  8 8  10     1  259 98  10     1      10 3  10     1      10 6N  8 1   13 1 pm  W1    7 21 0   W1  J  12 5   120   W1      17 400  2 6   12  L  17 801  2 6   2      18 0Qshort  10   W2      20
101. 000000000e 01   ARRAY LOCATION OF REF  PIXEL  CTYPEl                                OF COORD  ON AXIS 1   CTYPE2    DEC  TAN             OF COORD  ON AXIS 2  HISTORY THIS FILE WAS CONVERTED FROM MIRAC PC FORMAT BY MRC2FTS V  2 31  HISTORY          OF CONVERSION  Fri Nov 20 08 57 12 1998   HISTORY ALL OFF SOURCE FRAMES IN THE ORIGINAL IMAGE HAVE BEEN SUBTRACTED  HISTORY  HE IMAGE HAS BEEN ORIENTED WITH NORTH UP AND EAST TO THE LEE  END       5 22 99   10  Reduction of MIRAC Data using IRAF 137    Appendix 10  Reduction of MIRAC Data using IRAF    Joseph L  Hora Updated April 1996    The MIRAC data files can be directly converted to FITS files and reduced using IRAF and several  stand alone C programs  Below is a sample log of an IRAF session where an image of Alpha Tau  was constructed from several MIRAC observations  All IRAF commands below are on lines  beginning with the IRAF prompt   cl gt     and at the end of the line I have put a colon and command  line number  e g    1    At the end of the log are comments for every numbered line  Commands that  begin with the exclamation point       are external commands or programs  In several places I           cut out program output lines to save space  this is indicated with three lines containing periods  such  as in command   4 below     The reduction below contains everything necessary to go from the raw data to the final star image   A number of steps  such as constructing the gain and mask images  need only be done once per  
102. 08 29587 28296 27682 21234  5 50 475 409 246 235 230 1 77  1357 1030 937 980 937 917 771  781 687 591 428 409 400 30    124 109 937 815 779 762 585    20    180    33 8    341    9 8    168    69 2    30 5    99 1            Tenue A 5195  D VITIA    45 22 99      2  Standard IR Stars 111    A2 2 Notes on Standard Stars    The following notes on mid infrared standard stars was provided by Marc Kassis  The notes give    the Bayer Greek letter name followed by the  Bright Star Catalog    2     s  estimation of the star   s    variability and  basic data  presented by the SIMBAD data base  A collection of comments follows  each standard star entry        Star Bright Star Cat SIMBAD   Alpha Aql High proper motion star   Alpha Ari Suspected Var Var   Alpha Aur Suspected Var Var of RS CVn type   Alpha Car               Star   Alpha                      Spectroscopic Binary  Within errors estimated to be 2 percent  3 percent at 20 microns   Cohen et al   1995   do not detect variability in the assembled spectrum of this star    Alpha CMi Suspected Var Spectroscopic Binary   Alpha Her   Var Double or Multiple star  Radial velocity variations with a period of  1 yr were detected by Smith et al   1989  AJ 98 2233    Alpha Hya Suspected Var Var  Larson et al   1999 ASP Conf  series  find that this star has radial velocity variations  on the order of 1 to 2 years  Within errors estimated to be 2 percent  3 percent at 20  microns  Cohen et al   1995  do not detect variability in the assemb
103. 09  88 inch HP office  933 4104  88 inch summit  974 4200  88 inch summit fax  974 4202    242 MIRAC User s Manual    Infrared Telescope Facility Office   808  956 8101  Institute for Astronomy Fax  988 3893  2680 Woodlawn Drive    Honolulu  HI 96822  Div  Chief  Robert Joseph  joseph  hubble ifa hawaii edu   Sec y  Karan Hughes  hughes  hubble ifa hawaii edu     IRTF Office   808  974 4205  P O  Box 4729 Fax  974 4207  1175 Manono St Hale Pohaku  974 4213  Bldg 393 Fax   969 7624  Hilo  HI 96720 Summit  974 4209    Fax  974 4212    Joint Astronomy Center Office   808  961 3756  660 North Aohoku Place Office Fax  961 6516  University Park Hale Pohaku  933 4105  Hilo  HI 96720 Summit UKIRT  961 6091    UKIRT Dir  Andy Adamson  a adamson Gjach hawaii edu  Summit Fax  935 0221  Sec   y  Anna Lucas            jach hawaii edu     Engineer   Caltech Submillimeter Observatory Hilo  808  935 1909  P O  Box 4339 Summit  935 9853    Hilo  HI 96721 Summit Fax  935 2708    5 22 99      24             Addresses and Telephone Numbers    243    Appendix 24             Addresses and Telephone Numbers       Name email  phone  fax Address  MIRAC http   cfa www harvard edu  jhora mirac html  Aditya Dayal adayal  ipac caltech edu IPAC  Work  626 397 7320 Mail Stop 100 22  Home  626 792 2312 770 South Wilson Avenue    Lynne K  Deutsch    Giovanni G  Fazio    William F  Hoffmann    Joseph L  Hora    Richard Florence    Fax  626 397 9600    deutschl bu edu  Work   617  353 2633  Home   508  266 264
104. 145 Ibs 10 6 93   Power Supply  Gray Duct Tape 12x26x24h 81 Ibs 10 6 93    Computer  Yellow Fiberglass 28x28x16h 110 156 10 6 93    Monitor and Files  Yellow Fiberglass 18x34x22h 86 Ibs 10 6 93     Cryostat  Gray Polypropylene 40x22x26h 103 Ibs 7 9 93     2 27 96     Transfer Tube  Cardboard Carton 25 165 74  21  7 2 27 96     9 crates 842   52   790 Ibs    5 22 99      13 3 Shipping Labels for                 UKIRT    Steward Observatory  University of Arizona  933 N  Cherry Ave   Tucson  Arizona 85721  Phone  602  621 6529  Attn  William Hoffmann    Joint Astronomy Centre  660 N  A   ohoku Place  Hilo  HI 96720   Phone  808  935 4332  Attn  Andy Adamson    A13  Shipping Procedures and Shipping Inventory    165    Steward Observatory  University of Arizona  933 N  Cherry Ave   Tucson  Arizona 85721  Phone  602  621 6529  Attn  William Hoffmann    IRTF  1175 Manono St   Bldg 393   Hilo  Hawaii 96720  Phone  808  974 4205  Attn  Paul Jensen    166 MIRAC User s Manual    A13 4 Shipping Inventory and Packing  Packing instructions are given in Sections 5 3 and 5 4     Items are listed in order of packing  inverse order for unpacking   Volume and weight of 8 crates are 56 cubic feet  748 Ibs     The foam in each crate is labeled with the crate number and the foam layer number  1 on bottom    The foam should be placed in order in the lid as it is removed from the crate and returned to the    crate in order before storing the empty crate     The individual items are labeled with the
105. 2  Fast Data Mode                                         SUP               71  9 9 3 Ultra Fast Mode                                             71  910 Telescope Control ec recria as eg er                basa 72  9 10 1 Nod Control by Logic         1                                  12  9 10 2 RS 232 Control of the Telescope                               72  9 10 3 Ethernet Control of the Telescope                               73    9 10 4 Offset Modes and Taking Data                                 74    5 23 99 Contents 11    10  Mask  Gain  and Plat Field                                           YR 75  TU  T                                                   PESE    eR KR bx Y 75  10 2        Map Generation                                               76  10 3 Pr  paring a Hat Field 222255552299                 Oa Gi      76  10 4 Using the Mask  Gain  and Flat Field maps                               77  10 5 Principles of Mid Infrared Flat Fielding                                  77   11  Reading Stored Data and Data Processing                                      79  11 1 Methods of Loading Data                                            79          C  rrent Observation x   oy                        ia ees 79  11 1 2 Accumulated Observation                                     80   1 1 3 Replay Mode                    erento ORGAO EA ARGOS 80                        522                         ees Seta e keep ewe       80       MOSAIC e acd    e        eee ge        
106. 22 99   14  Hardware Preparation and Setup 181    the start of the cooldown  If the chambers are topped off with LN  around five after the fill  the  inner will hold for 48 hours and the outer for 15 hours  A plot of the LN  cool down is given in  Figure   14 2     300       250    200                       Temperature           e          Outer 7 Funnels LHe Transfer     Inner 10 Funnels               0 00 1 00 2 00 3 00 4 00 5 00 6 00 7 00 8 00  Time  hours     Figure A14 2 Cryostat Cooldown      14 3 4 Liquid Helium Cool Down    The liquid helium cool down can be started any time after the detector temperature sensor is close  to 80     This can be estimated from Figure A14 2 or determined by starting the MIRAC program  and turning on the MIRAC Power Supply Temperature Monitor Switch  Section 6 1      The remaining LN  in the inner chamber must be first removed by transferring it out to the 4 liter  transfer dewar using the LN  removal fitting and tubing and a source of pressurized gaseous dry  nitrogen  or helium   With a pressure of a few oz  one liter of LN  can be removed in 5 minutes   The gas flow through the fitting should be continued for an extra 1 or 2 minutes to insure there is  no LN  remaining in the chamber     The LHe transfer is carried out with a vacuum transfer line  The minimum dimensions of the  transfer tube are  length of tubing into cryostat  11 7 inches  separation between the cryostat and  supply dewar tubing  17 25 inches  xxx plus the radius of t
107. 4 5   The range of magnification for the MMT is  57  pixel scale  28 arcsec pixel and  field 36 arcsec  to 1 14  pixel scale  14 arcsec pixel and field 18 2 arcsec      Table   14 5 Cryostat Magnification Slide    Position Magnification KnobGap Case Faceto Telescope   cm  Focus  cm   Out  down  6 3  1 43 6 2 7 1 S O  1 5  2 3 m  IRTF  UKIRT  2  46 6 0 6 0     3 ol 5 6 4 4 2  4    57 5 2 2 9        6 5 m  5    80 3 5   8     6 1 0 2 0  2 7      7 1 14 1 0  3 6                  8    CAUTION  IF THE MAGNIFICATION ACTUATOR DOES NOT MOVE SMOOTHLY TO  THE HIGHEST POSITION  DO NOT FORCE IT  THERE MIGHT BE INTERNAL CABLE  INTERFERENCE     A14 9 TV Relay Optics Pupil Setting    This involves selecting  installing  aligning  and focusing the correct pupil stop  This is done with  the telescope mirror cover open with a bright background behind the telescope secondary  This  can be a brightly lighted white dome  or the daytime sky  The guiding TV should be removed  from the guider box  The guider box optics should be in the low magnification position     Step 1  Choose the appropriate pupil stop  The pupils are located in a small envelop in  the  Camera Mounting Tools and Screws  parts box  The S O  2 3 m pupil is  067 or  072  in  The IRTF pupil is  081 or  087 in  Loosen the pupil clamping plate screws and slip the  pupil stop under the clamping plate     Step 2  Using a jeweler s loop to view the pupil and the image of the secondary created by  the TV relay optics  adjust the position
108. 5  Fax   617  353 5704    fazio  cfa harvard edu  Work   617  495 7458  Home  969 8055   Fax  495 7490    whoffmann  as arizona edu  Work   520  621 6529  621 7928  Home  323 0814   Fax  621 1532              cfa harvard edu  Work   617  486 7458  Home  243 9973   Fax  495 7490    richard a florence  boeing com  Work  714 762 4553  Fax  714 762 0844    Pasadena  CA 91125    Astonomy Department  Boston University   725 Commonwealth Ave  Boston  MA 02215    Center for Astrophysics  60 Garden Street MS 65  Cambridge  MA 02138    Steward Observatory  University of Arizona  933 N  Cherry Avenue  Tucson  AZ 85721 0655    Center for Astrophysics  60 Garden Street MS 65  Cambridge  MA 02138    The Boeing Compamy   Autonetics Guidance Navigaion   amp  Sensors   3370 Miraloma Avenue   P O  Box 3105   Anaheim  CA 92803    244 MIRAC User s Manual    5 22 99    2 3 m   11 19 21  41  47  48  72 99  104   170  183  186  188  195  198  200   201  236  237    absolute              24  73  74  151  229  accumulated observation              80  add 36  71  81  97  104  120 122  132  229    235  236  addtess                           1  163  239  243  addresses             3  13  164  241  243    airmass 19  22  50  71  76  78  101  105  119   123  124  133  134  136 138  140   141  143  144  172  177    aligning             93  94  105  186  195  Alt  21  31  35  42  53  60  65 67  162  227  ACE  keys vie oe Sie 42  67  analog            4  62  93  170  176  210    arcsec 4  6  9 11  24  25  34
109. 6  118  119  123    125  127  131  132  134  137  140    143  144  159  170  227 231  233    235 238   DISP   24  25  33  48  50  62  66  72  74 77   79  80  82 84  89  90  96  98  102    145  152  153  155  157  158  161    162  197  201   display  4  24  25  31  33  39  42  43  50  60   62  64 66  71  72  74  75  79 91  93    95  97  98  101  102  104  123  125    127  152 156  158  161  192  194    197 201  208  227  232                                        11 81  divide  iue du                97  140  141      519  21 23  31  32  34  36  42 46  50  53   54  57  59  60  72  73  81  96  119    123  143  170  227  235   DOS shell               32  42  44  96  DSP 4  31  34  35  62  63  71  72  101  102   143  145  148  161  205   em  il   cse REX E 13  15  163  243                     dad ete                   65  ethernet   4  15  16  19  23  24  73  89  151   170  183  191   exit 31  32  37  65  96  137  154  157  235     236  expansion factor                 81  95  fast data               23  71  72  96  104  D   qM             17  241 243  file transfer                   100  227            7  9  27  28  34  35  39 43  45  59  66   67  76  78  105 107  115 117  133     135  136  143  144  147  148  150  168 170   173  176  191  192  194  219  224 226   filter wheel 34  67  116  135  173  194  219    224  226   FIT25  29  48 50  62  66  80  85  87 90  103    152  157   FITS 6  42  61  72  83  95  96  99  100  107    131 135  137  140  141  150  158    201   flat field 
110. 6 1 13 10  12 5 11 9 13 07 1 16 10  17 4 17 17 17 63 45    026  17 8 17 57 18 03 46    026  18 17 1 18 9 1 8 10  20 6 19 9 21 3 1 4    068          7 6 10 013 TI 11  8 6 13 014  79 12  10 0 17    017    79 13  12 5    21    017    65 14  14 5    21 014 42 10    2 5      16 Array        MIRAC System Properties    The array and system properties for the detector at 5 0 K are given in Table 2 3  G is the mean  electron gain  p is the dispersion in the gain over the array  It is desirable to keep the sky background  flux in the high leakage pixels less than the maximum linear range  and the average background  greater than the background at which the BLIP noise is at least twice the zero background system  and readout noise  For very low background filters such as 2 2 um this might not be achievable  because the high dark current pixels will exceed the linear range at frame times greater than 140 msec     8 MIRAC User s Manual    The BLIP noise is given by       BLIP Noise     background electrons x         2 1     Table 2 3 HF16 Array and MIRAC System Properties at 11 7 um    Array temperature 5 0 K  Detector substrate bias 3 0 V  Detector bias 2 0 V  Read time 1 1 msec  Transimpedance  array output input  096 u V electron  Transfer  preamp input to A D output  305 mV digital unit  Transfer  array input to A D output 3191 electrons digital unit  Effective input capacitance 1 7 picofarad  System  A D toggle  rms noise at A D 41 digital units  referred to preamp input    125 mV  A
111. 8 6 0 62 35 2530    059 25 34 7 9  9 8 0 69 20 3210 11 38 58 7 1  10 3 0 73 20 2750    082 27 42 7 4  117 0 83 20 2550 080 25 43 7 1  12 5 0 88 20 3200 071 25 44 6 9  106   0 75 6 6 3700    050 11 17 8 2  17 4 1 23 39 3160 1 8 890 2090 2 0  17 8 1 26 31  18 1 27 4 4 3700 75 160 390 3 8  20 6 1 46 8 7 3000 2 0 456 1230 22          8 8 0 62 70 1200  CVF 10 3 0 73 70 1460  CVF 13 5 0 95 35 2590    Measurement settings  Magnification   41  IRTF pixel  34 arcsec   Bandwidth   71 usec  Burst  Mode  Read time  2 2 msec  The frame times are chosen for background within linear range  and for noise to be background shot noise limited  Section 7 3   The background scales directly   and the sensitivity  Jy unit  inversely  as the frame time  The noise is for chop nod  source in  one beam  one minute total time except for 2 2 and 3 8 um which are chop only  The point  source noise is determined from the surface brightness noise by assuming 1 2 the signal appears  in a disk of the root sum square of the diffraction FWHM and seeing FWHM  taken to be  5  arcsec   For the Steward Observatory 2 3 m  UKIRT 3 8 m  and MMT 6 6 m telescopes the  sensitivity in Jy unit should be multiplied 1 7   64  and  46  respectively and the noise in  mJy arcsec  by 1 3   8  and  46  respectively     5 23 99 2  Overview        Performance 11    Additional notes to Table 2 4     1  The observed image FWHM is determined by diffraction  telescope aberration  chopper distortion   and seeing  At the IRTF  the latter
112. 88 MIRAC User   s Manual    Options  DOLI EE Redraw Value Hardco Output Exit    30        70        5                20  10                0       1 2 3 4   6 7    3 10  Radius  Gaussian Fit  Peak   7 469E 1 Pos    lt 63 98 64 02  gt   FWHM   3 00 Const   3 942E 1 ChiSar  1 200E 1  OBS  4 05 96 15 33 00 c960405a  001 SIMULATED STAR IDLE 0 00 0 02    5  DISP  4 05 96 15 16 57 76 Data not saved SIMULATED STAR Mode  Current    Figure 11 5 Radial Plot of Simulated Star with Gaussian Fit to Profile    11 2 7 Plot Command Line Options    The Plot command line has various options that allow the user to change the way the data is  displayed  to examine the data  and to print a copy of the plot on a printer  The sections below  describe these commands  There are two kinds of plots  one dimensional  1 D   such as Slice  or two  dimensional  2 D   such as Grayscale  The commands that are available in only one of the modes is  marked with either 1 D or 2 D  otherwise the command is available in both menus and is not marked     11 2 7 1 Setup    This menu allows the user to change the way the plot is displayed on the screen with a number of  submenus and commands     Display Size  Limits  Style  In this menu are such things as setting the location of the plot on the  screen  the range of data that is displayed  and whether to use log or linear plot scales  and to  autoscale the X and Y axes  This menu also permits selecting the color of the plot labels and plot  grid  The position  1 1  i
113. 94  12 3 Camera Control and Testing                                          94  124 AS CUMMUIDUL 153                                     PHI       95  12 5  FITS FIE OQutp  t ee                                 95  12 6  DOS               96  12 7 Unpack Fast Data and Ultrafast Data Files                               96  12 89  Rebuild  L  g  File 225p ey ers saw Ge e se ICD ee Y S e 97  12 9 Arrange data into lines or image                                       97  12 10 Exchange columns to fix image                                       97    12 11 Standard Deviation calculation                                       97    iv MIRAC User   s Manual    12 12 Display Image Arithmetic                                           97   13  Post Processing Images                         e ee eee eee ee eds 99  13 1 Converting files to PITS                                                    99   13 1 1 Converting using a unix                                             99   13 1 2 Using the MIRAC3 program to convert to FITS                    99             st                              99   13 5  Further Conversion of Files                                          100  Glossary of  Terms   vesci sai e arse CER taints                                     101  Appendix 1  Principles of Mid IR Observing                                       103  A1 1 Mid IR Observing with Chopping  Nodding  and Offsetting                 103     1 2 Integration Times        Chop Nod Options            
114. A  8 8 pm  Second wheel  Open     9 8 yum  Third wheel  Open Cy 10 3  qm  CVF positioning D  11 7 yum  Precise control   gt  E  12 5       Turn off motor current F  Open  Init Filters Gs  7 2 0  6  Q3   Magnification 0 439 H  10 6 N  Arcsec Pix 0 340 I  7 9 ME  Wavelgth file filtpl txt J  CVF Start  Go to next CVF wavelth e     Reset CVF Wavelth file  Enter Pupil Info    36  IRTF p     Second Wheel     5    A  Open          Precise Control          18 0 Qshort   Els 0 F2  0 F3  0 C  17 4 QO  Active wheel  1 D  i729  Ql  Step increment 1000             Forward Move     4 8     Backward Move G  2 2 K  Go to a position H  Pupil Imaging  Home I  20   J  Turn      controller power J        2  K  Shut Motor drive off       L  Turn Motor drive       M  Turn off controller power  N  HomeSW Position                      148 MIRAC User s Manual                                                                                                                                                                                                                             Wheel       p     Magnification       A  Open     43      Blank      46  Cs Can 252  D  Dies SF      E 5080          1 00          1 14      G  Enter value 0 43           Js                     Pupil Info          A  Blank  B     45  SO 1 5  2 3 m   C     36  IRTF UKIRT   D     30  CTIO 4m   E  f 16  SOFIA          15         6 5 m   r Hardware Settings z   A  Init  COL subarray 1  0 3  0 p E  Bandwidth  Time Com  B  End COL suba
115. All Arguments     Last Argument     First Argument 2  n th Argument     Arguments x Through    xy  Modifiers   Print Command Line       Substitute Command Line   g s 1 r   3 2  Aliases  alias Command alias name  definition   definition can contain escaped history  substitution event and word designators as  placeholders for command line arguments   3 3  Variable Substitution  Creating a Variable set var  Assigning a Value set var     value  Expressing a Value  var  Displaying a Value ech  var  value is a single word  an expression in quotes   or an expression that results in a single word  after variable  filename and command    substitution takes place     Assigning a List set var    list     list is a space separated list of words  or an  expression that results in a space separated    list   Selecting the      Item  var n   Selecting all Items  var  Selecting a Range  var x y   Item Count   var    3 4  foreach Lists   Start foreach Loop foreach var  list  foreach prompts for commands to repeat for  each item in  ist  with gt    until you type end   Within the loop   var stands for the current  item in list    3 5  Command Substitution   Replace Command with its Output on the    Command Line    3 6 Job Control       Run Command in the Background  amp   Stop Foreground Job Control Z  List of Background Jobs jobs  Bring Job Forward        Resume Job in Background   n   4  Processes   Listing ps   aux   Terminating kill   9  PID  Timing time command  Scheduling at time a p  sc
116. Assembly plastic box  remove the six screws  Place the screws and washers in the Guider Box  Assembly plastic box     24  Lower the table with the guider box  Screw the cover plate over the round hole in the top of  the guider box     25  Return to Guider Box Assembly plastic box to the MIRAC table in the control room  Store  or  pack in Crate 1  the guider box     Final Control Room Tasks    26  After the cable at the telescope is disconnected and retied  the following should be done in the  control room as protection for the equipment     1  unplug the camera  computer  and monitor AC power cords   2  disconnect the BNC chopper cable at the barrel coupler near the computer  3  disconnect the network connect at the back of the computer     Packing the Cryostat    27  If the cryostat is to be packed  it should be packed in MIRAC Crate 7  a gray Polypropylene  crate     28  The window cover should be over the cryostat window     29  The LN2 and LHe caps should be on the LN2 and LHe vent fittings with the tubing aligned with  the arrows on the cryostat top     30  Put the white foam top protective cover on the cryostat taking care the vent tubing is aligned in  the cutouts in the foam     31  Place the cryostat in the bottom protective cover taking care that the LN2 vent tube is aligned  in the cutout  Secure with the two short Velcro straps     32  Wrap the cardboard vest around the cryostat with the two handles coming through the handle  holes in the vest  Note the marked win
117. Begin StDev calculation        Jl          A12 3 2 UTIL  Arith    Add constant  Subtract constant  Multiply by constant  Divide by constant  Invert map  Justify map  Boxcar Smooth Map  X Flip  Row   Y Flip  Column   Transpose                               160      12 3 3 UTIL  Macro                         F    m      Macro Menu    MIRAC User   s Manual          Display Macro Definitions  Begin Macro from disk  Assign Macro to key   Remove Macro assignment  Save current Macro to file  File Dir of Macros         o   mrm                  1     2          F4         F6   E    print  savefits  findstar  stdparm  objparm  disparm       F8    None defined        None defined        F9    None defined     F10  savrdrun    Press any key to continue       Current Macro Definitions  4                      Assign MACRO to Key    Enter F key to assign macro              1 10 valid         We       A12 3 4 UTIL  Temp              l             DTVolts   0  HeatVolts  0  Ambient       0  Electr     0  A DTemp V  0  LN2Temp V  0                   Temperatures  Enter ms delay between samples  1000     0012   0012   0012   0012   0012   0012    5 000  0 0000  10 22  23 54  45 07  76 33    lll                5 22 99   12 3 UTIL  Command Line Menus 161    A12 3 5 UTIL  Scope                                        Scope Display                       First display column 1  Second display column 128  Edit Scope Header   gt   Change Display Params Scopdic spc  Offset for second trace 0 000  Dble2S
118. C display  O units is  always 0 flux and the linear range is identical for all offsets  The variable offset is adjusted with a pot  on the first board in the preamp box  The values of these offsets are given in Table A17 10     The 16 output channels are interleaved on the array in a 2 column by 8 row block as shown in Figure   A16 4  The figure shows the 2x8 pixel blocks with line numbers and indicates row and column numbers and array  pin numbers at the array corners  in brackets   Also shown is the location of the temperature sensing resistor on the  chip carrier  Each of the pixels in a block are read at the same time  The pixels are reset in groups at  a time after the whole group has been read out  The eight blocks in the lower half of the array are  reset together while the first two blocks in the upper half are read and the eight blocks in the upper  half reset while the first two blocks in the lower half of the next pair of columns are read  This makes  it impossible to operate this array in a double sample mode  whereby each pixel is read both before  and after resetting  Since this array is usually operated at high flux with the noise of each read  dominated by photon to electron conversion shot noise  suppression of read 1 f noise by double  sampling is not required  However  this resetting method necessitates a special approach to burst  mode  fast read of the array after a slow integration period  by which the bias voltage VDDR is  clocked in order to inhibit th
119. C team several days prior to the telescope deadline to allow time  for their inputs  This can be done by email to the addresses below in either TeX or postscript format   This list below gives the names  street addresses  and e mail addresses of the five of the team  members  The affiliations as they should appear on publications which include MIRAC3 are also  given     Aditya Dayal   IPAC M S 100 22   California Institute of Technology   770 S  Wilson  Ave   Pasadena  CA 91125   adayal  ipac caltech edu  affiliation  IPAC Caltech    Lynne K  Deutsch   Astronomy Department   Boston University   725 Commonwealth Ave   Boston  MA 02215   deutschl bu edu   affiliation  Astronomy Department  Boston University    Giovanni G  Fazio   Harvard Smithsonian Center for Astrophysics   60 Garden Street  MS 65   Cambridge  MA 02138   fazio  cfa harvard edu   affiliation  Smithsonian Astrophysical Observatory    William F  Hoffmann   Steward Observatory   University of Arizona   Tucson  MA 85721   hoffmann  as arizona edu   affiliation  Steward Observatory  University of Arizona    14 MIRAC User s Manual    Joseph L  Hora   Harvard Smithsonian Center for Astrophysics   60 Garden Street  MS 65   Cambridge  MA 02138   jhora  cfa harvard edu   affiliation  Smithsonian Astrophysical Observatory    3 2 Observatory Arrangements    Many details for observatory arrangements can be found in the Observatory home pages given in  Section 2 1     3 2 1 Kitt Peak Arrangements    Arrangements for Kitt Pea
120. CH A B SELECT CH A CHB  _   MEM OUT ENABLE A   B  COADD IN LATCH               WRITE   1         pl  0 8 16 24 32  Bit Clock Cycles  Figure A16 7  Signal processor pixel timing   ARRAY READ  amp  COADD  ARRAY RESET w  CHOP  WAIT           pede ee ebbe  PIXEL INTEGRATION    WRITE COADDER OUTPUT  TO COADDER MEMORY    TO FIFO MEMORY    CHOPPER DRIVE SIGNAL    DATA READY SIGNAL                                                                                                                            4                                  100 5 msee          _____ gt                                                                                                                 0    20    30    40 50 60    Array Read Cycles    Figure A16 8  Array read timing with chopping     70    80    90       00    16 FIFO s to the digital signal processor in the PC  taking about 17 msec for the data transfer while  the next chop half cycle is taking place     212 MIRAC User s Manual    213    ostat Inputs and Outputs      17  Cry    5 22 99    Appendix 17  Cryostat Inputs and Outputs                                                  B  d          He 34133313 LLL LLL                  1   BEERS                  EE                                                    414141                                       7    4       1011 144115    133   urgqiidi 23d           ees sus  PG GEEEEEEEE TET rr    Table A17 1 Bia ee   Detector Cold    TEEEEREEEEHLL             scd cos         gan                      SE
121. D  8 7381 D  8 5 psec  E  17 4763 E  17 2 usec  F  34 9525 E 34 1 psec  G  69 5067 G  68 3 psec  H  139 1810 H  136 5 psec                                                                                                                                                                                                    5 22 99 A12 1  OBS  Command Line Menus 147                    of 5  MGR and Chop Paramet         Variable    Nod Wait Time  On src  sec  3 00    Low    Off src Nod Wait Time  sec  2 00    Medium    Wait time  chopper  ms  4 369    High    evel of Off Src Chop beam 0                Source                                Source Name ALPHA BOO  Comment  Image coordinate parameters   gt   R A  of Object 14500322775                coordinate                         Dec  of Object 19426730795  Epoch of Coordinates 1950 00     Initial Column T  List of sources O  GALSHORT DAT B  Initial Row 18  Find source in list C  End Column 128  Airmass  1 576 D  End Row 128  Get current standards E  Offset  Columns 0 000  Put current source in list F  Offset  Rows 0 000  F Search for current standards 3  ALPHA BOO 14 13 22 75 19 26 30 95 1 4440  ALPHA SCO 16 226 20 21    26 19 21 95   1 5155  ALPHA HER 17 12 22 00 14 26 45 00 1 0073  GAMMA DRA 17 55 26 50 51 29 37 00 1 1794  GAMMA AQL 19 43 52 90 10 29 24 00 1 1994  MU CEP 21 41 58 50 58 33  0 00 1 9492  End of search  Press key to continue                   Filter Settings         5 p      First                     First wheel  8 8 
122. G STRAPS FOR SUPPORTS  3 PLACES    HELIUM VESSEL LID SUPPORT  TRIANGLE     HEAT EXCHANGER FOR SUPPORTS  HELIUM VESSEL   COLD PLATE   STRAPS FOR ARRAY   INTERFACE  PLATE   SHORT COLD SHIELD   BIB ARRAY MOUNT   ARRAY SLIDE LINEAR CROSS  ARRAY UP POSITION   4K SHIELD   77K SHIELD   1 POSITION FILTER WHEEL   8 POSITION WHEEL FILTERS Cy    CVF WHEEL            APERTURE SLIDE    FILTER WHEEL MOUNTING PLATE    FLAT MIRROR    4K BAFFLE    77K BAFFLE    MIRROR    WINDOW    GETTER CONTAINER       SHIELD SHUTTER    FLOATING SHIELD    VACUUM GLAND FOR APERTURE SLIDE    VACUUM GLAND FOR SHUTTER    VACUUM GLAND FOR ARRAY  SLIDE WITH INDICATOR    VACUUM VALVE  FERROFLUDIC FOR FILTER  WHEELS 3 EACH   2 010 STYLE ONE NEW    DELRIN COUPLER    MOTOR DRIVE    STAND       Figure 2 2 Drawing of MIRAC3 cryostat        6 MIRAC User s Manual    A C program is available for processing the files stored in MIRAC format  combining the chop and  nod images  applying a mask and flat fielding corrections  and producing image files in FITS format     Typical one sigma sensitivities at the IRTF are 26 mJy arcsec  at 11 7 um  1096 bandwidth  480  Jy arcsec  at 20 6 um  6 8  bandwidth  and 70 Jy arcsec  with the 2  bandwidth CVF in 1 minute  total time  chop nod  with the source in one of the four beams     2 3 Magnification and Pixel Scale    The magnification can be zoomed from  43 to 1 14 with seven positions located by detents   Table 2 1 gives the magnification  pixel scale  field size  and wavelength for 
123. MIRAC3    USER   S MANUAL    Steward Observatory  University of Arizona  Harvard Smithsonian Center for Astrophysics    William F  Hoffmann  Joseph L  Hora    Manual Version mrcman91 99w wpd  May 22  1999    Program Version 7 22  May 3  1999    readme txt May 22  1999    This readme txt file dexcribing the MIRAC3 Users Manual  and the gzip  postscript MIRAC manual files can be found in    kepler as arizona edu anonymous pub mirac  The current version of the MIRAC Users Manual  mrcman91 99w wpd  was    completed May 22  1999  This version has been updated for the hardware and  software changes in MIRAC3 and includes corrections and additional    material on standard stars  filters  and operation and troubleshooting the  camera  Send comments to whoffmann as arizona edu  The following gzip compressed Postscript files contain the manual  The       postscript files are printed with a binding offset for double sided  printing           File Chapters Pages Compressed  Uncompressed  mr01x02 ps gz Contents   2 Title   12 319562 1494992  mr03x10 ps gz 3   10 13   78 610574 2786308  mrllix13 ps gz Ll L8 79   102 264316 2531688  mra01x10 ps gz Al   A10 103   142 678263 3958165  mrallxi13 ps gz   11   A13 143   178 122065 518709  mral4xi5 ps gz   14     15 179   204 2409854 6116263        16  19   5 42   16   A19 205   226 215722 1586640  mra20x24 ps gz   20     24 227   249 107361 403727  readme txt   MIRAC Manual Organization       The MIRAC User   s Manual provides information and che
124. Manual      8 2 The aircor Program    The aircor c program applies an extinction correction to a range of FITS format data files  using the  user supplied correction factor and the value of the airmass in the file header  specified by the FITS  keyword  AIRMASS   The compiled C program can be obtained from the MIRAC home page       the WWW  Section 2 1   The files should already have been masked and gain corrected  The data  in the files will be multiplied by a factor to correct the image values to an airmass of 1 0  based on the  value of the airmass given in the data file header  The capability to override the header value is  provided in case this the object name  hence RA and Dec  was not correctly entered at the time of  observing    To compile the program  two other files besides aircor c are needed  fitsio c and fiocom h  All three  files should be placed in the same directory and the following command executed to produce the  executable file aircor     cc aircor c fitsio c  Im  o aircor  Usage  aircor filename extfact   f   r n1 n2     where  filename is the full name or root name of the file or files to be processed  For example  a  single file name is 1920604   453    a root name is 1920604       extfact is the extinction  factor to be used  The data values are corrected by applying the following formula  to each pixel value   newval   oldval   10  extfact  Airmass   1 0  2 5     Options    f is the option to force    calculation of the airmass if the header is inco
125. N  cool down  close the cryostat vacuum valve and remove the vacuum  pumping line  The LN2 shutter should be closed  up position   Set the pupil slide and  magnification to the positions desired for observing run  Make sure that the three  actuators are fully withdrawn  See Section A14 8 for detailed instructions     The cool down is carried out by pouring LN  from a 4 liter LN  transfer dewar into the MIRAC  inner and outer cryogen chambers with two 0 7 liter metal funnels fashioned from army canteens   One has a 14 inch tube for the inner  LHe  chamber and the other a 6 inch tube from the outer   LN  chamber  The black plastic rods should be kept in the funnel tubes  inserted from the tube  opening  for protection at all times when not transferring  The same rods are inserted into the  tube funnel end to stop the LN  flow when the cryostat chamber is full  It requires about 7 funnels  full  5 liter  for the outer and 10 funnels full  7 liter  for the inner over about 50 minutes to cool  down and fill the cryogen chambers  Transfer into both chambers at the same time starting with  the outer  In between transfers and when the chambers are filled  the two foam tubes should be  placed on the cryogen fittings to direct the cold boil off gas away from the cryostat top surface   The first charge lasts about 12 hours for the outer chamber  and more than 48 hours for the inner  chamber  if the outer is not refilled  The detector assembly will reach 78 K in about 5 hours after    5 
126. Plot Levels   gt   Gray level scaling   gt   Printer setup   gt   Save Parameters MRC SPC             Read Parameters MRC SPC    Contour  Grayscale  Values  Slice  Frequency  Histogram  TableStDev  Radial  Default  XHexValues                                                                         p  Contour Plot Levels    evel 1 0 5000  evel 2 1 0000  evel 3 1 5000  evel 4 2 0000  evel 5 2 5000  Level 6 3 0000  evel 7 3 5000  evel 8 4 0000  evel 9 4 5000  evel 10 5 0000  evel F 5 5000  evel 12 6 0000                                                                                                                                                                                                                   156 MIRAC User   s Manual   f    Display size  limits styl    F Labels of plot             A  Max X data 10 00000 X Axis label   B  Min X data 1 00000 Y axis label   C  Max Y data 10 00000 Plot Title   D  Min Y data 1 00000 A  Places LEFT of the dot X 4  E  Left X 100 B  Places RIGHT of the dot X 0      Right X 600 C  Places LEFT of the dot Y 4  F  Bottom Y 400 D  Places RIGHT of the dot Y 0      Top Y 20             major tics 5  I  Log X axis labels Off F  of Y major tics 4  J  Log Y axis labels Off G  Length of X tics 4  K  Auto X Axis limits On H  Length of Y tics 5  L  Auto Y Axis limits On Ix of X minor tics 5  M  Color of labels White de of Y minor tics 5  N  Color of grid White K  Length of X minor tics 2          Length of Y minor tics 2        level               
127. R PC  The monitor power should automatically come on  If a floppy disk is  in the floppy drive  it must be removed   Computer should boot  connect to the  network  set the PC time from the network  and show the DOS prompt  If computer  was running a tape backup  exit backup program if necessary     At keyboard type MIRAC   enter    This will reset the computer time from the network    load the DSP  Digital Signal Processor program  and start the MIRAC program    Turn on Temperature Monitor  left hand  switch on MIRAC power supply  in aluminum  suitcase   Two green LEDs at the power supply should come on    Confirm that DetTemp on monitor status display is 3 9 K  Mauna Kea or 4 3 K  sea level    If it is above these values  cryogen has run out and must be tended to before turning on  the camera     3  Confirm that the time on the MIRAC display is the same as the Telescope Control Computer  time  The PC time is set from the network each time it is booted and each time MIRAC is run   It can be reset at any time  For the PCNFS network software  Steward Observatory and IRTF   execute TIMES or RDATE   host    where host is the name of the observatory host computer   bok  planck  etc      4  Transfer cryogens into MIRAC cryostat   Follow instructions in Appendix 15     32 MIRAC User s Manual       5  Update observing directory  If this is the start of a new program during a MIRAC run  copy new  catalog  command  and offset files to the observing directory as required  Section 5 2  I
128. RAC computer is not connected to a network  the FITS files will have to be transferred to  a floppy disk in order to transfer the files from a computer that is on the network  On the SO 2 3 m  telescope  the PC under the table at the observer   s station is connected to the observing SUN    100 MIRAC User s Manual    computer  BOK  The ftp utility should then be used to transfer the files to BOK  The following is  a sample transfer session  The commands that are typed in by the user are underlined  the text on the  right side are comments     Sample file transfer session  from PC to SUN      C N  ftp bok  begins file transfer program  Connected to bok as arizona edu  220 bok FTP server  SunOS 4 1  ready    Name  bokobs  user name for observers   331 Password required for bokobs    Password   type in current password here  230 User bokobs logged in    ftp   type binary  sets binary transfer mode   200 Type set to I    ftp   prompt  i  will not ask for each file  it  will   Interactive mode off    transfer all matching files    ftp   mput f91     put files from PC to SUN  files      in default dir on PC      messages for file transfer    ftp   quit  end ftp session       gt     13 3 Further Conversion of Files    Once the files are on the remote computer  there is usually another operation necessary to put the files  in the proper format for that program  On IRAF  the files must be read in to IRAF format using the  command rfits  in the dataio package  The following command sho
129. RE  EHEER  43144   NBI                                                                          214 MIRAC User s Manual    Notes to Table A17 1     Measurement settings     Burst mode no  Read time xxx  Frame time xxx  Chop wait xxx  Flux level medium  Flux xxx     DET SUB and VRST   43 pa at 6x10    ph cm  sec   linear range  1 7 x 10    e  at 1 msec frame time  Detector bias   VDI   1 V   DET SUB   VDD1 8   VDD9 16  and VSOURCE current depends on the input flux and the output load        16    VOUT   VSOURCE    RLOAD   For RLOAD   30 K       VSOURCE   m5 Hh  6 255 V  Integrated Charge Empty Full Empty Full Empty Full   VOUT   4 45 2 10 4 45 2 10 4 45 2 10 V  ISOURCE   4 35 3409 3 23  1 97 2 08  83 mA    Power Dissipation     Pdigital   9V  7 6 24  2 1 pA        4V   5 8  4 7 8  pA    4  4  4  4  4  4 mW  Pbus    6V 2 45V    1 7 mA   5 30 5 30 5 30 5 30 5 30 5 30 mW  Poutput    5 6V VOUT    ISOURCE  5 00 10 80 3 71 6 90 2 39 2 90 mW    Ptotal   141 2 17 20 9 9 L3s4 8 6 9 1 mW    Operating the Array at Room Temperature    The array can be operated at room temperature with different bias settings  The bias box cover must be opened     Set bias switches Normal Room Temperature  54 1      Off Switch bypass for DSUB 24 3K series resistor  SW 2      Off Switch bypass for DETG 100K series resistor    Set biases    6 VDI 6 00 5 49  9 DETG 5 00 4 78  12 DETS 3 00 4 59 4 10   4 95 Det Bias   VDI   DETS   1 V  Cold     Det Bias   VDI   DETS    6 V  Warm     VDI should be adjusted for l
130. SUBARRAY COL STAR   SUBCOLND  3   SUBARRAY COL END   ARYCYCTM  1 092266640626   03   ARRAY CYCLE TIME  SEC   BURSTMOD  1   BURST MODE 1 ON  0 OFF   COMMENT DATA HAS BEEN REARRANGED INTO ROWS AND COLUMNS  FLUXOFST  3 368000000000   03   FLUX OFFSET VALUE  COUNTS   RAWMIN    1 632423583984   03   RAW ON SOURCE DATA MIN   RAWMAX   4 122500000000e 02   RAW ON SOURCE DATA         FRAMERRO  80   TRANSMISSION ERRORS CHOP PAIR 0  FRAMERR1  0   TRANSMISSION ERRORS CHOP PAIR 1  TOTCOAD2  512   TOTAL COADDS  BEAM2    FINX   64   NUM  COLUMNS      DATA BLOCK   OF LXOFF  1 572000000000e 03   LOW FLUX MODE OFFSET VALUE   MDF LXOFF  3 368000000000   03   MEDIUM FLUX MODE OFFSET VALUE  HIFLXOFF  6 058000000000   03   HIGH FLUX MODE OFFSET VALUE  VAFLXOFF  0 000000000000e 00   VARIABLE FLUX MODE OFFSET VALUE  DARKMAX   6 600000000000   02   DARK FRAME MAXIMUM VALUE  FULLWELL  7 508000000000e 03   FULL WELL VALUE                   5 180000000000e 03   LINEAR MAXIMUM FLUX VALUE   OBSF INUM  520   OBSERVATION FILE NUMBER     2           7 637139129639e 01   LIQUID NITROGEN  LN2  RESERVOIR TEMP  CDE    8 888889153324   05   DEGREES PIXEL IN R A    CDELT2   8 888889153324   05   DEGREES PIXEL IN DEC            11   7 294999999829e 01   RA OF REFERENCE LOCATION   CRVAL2   3 078666666396e 01   DEC OF REFERENCE LOCATION  CROTAL   0 000000000000e 00   ROTATION OF AXIS 1   CROTA2   0 000000000000e 00   ROTATION OF AXIS 2                  6 400000000000e 01   ARRAY LOCATION OF REF  PIXEL  CRPIX2   6 400
131. TS format  The maximum size is limited to the display array size  256x256  The automatic  masking  gain and flat fielding settings do not affect these maps when read in  The file name is set  in the DISP  LOAD menu     11 1 8 Noise    This mode was written mainly as a diagnostic tool in the initial testing of MIRAC  although it may  have other uses  The Noise mode constructs an artificial array from a series of observations taken  over time  The artificial array contains a single particular row or column from the series of  observations  The user may select which row or column is used  For example  if row 5 is selected   then the newly constructed array will contain row five from the range of images specified  Each  column of the new array will contain pixel c 5 n   where c is the column number and 5 n  is row 5  from image number  n  in the series     11 2 Display Modes    The following display modes are chosen in the DISP  Begin menu  When one of these modes is  activated  the main display screen is erased  and the chosen screen is drawn  Each of the possible  modes has a similar structure  the plot is located in the center of the screen  with a command line on  the top and a display status line at the bottom     A note on orientation  the main display screen data orientation can be changed using the DISP  Init  options of X and Y flip  and indicating the directions of N and E  This gives the program the  information necessary to control telescope motion and to record the o
132. The setup sheet should be completely filled out each night to provide a  freestanding record for that night     Use the observing sheet to maintain a record of the data taking including the  astronomical object and purpose  camera parameters  and information about each  image stored  The image statistics including sky flux  source sum  FWHM  rms  noise  and BLIP are useful for monitoring observing conditions and determining the  calibration  noise level  and source flux without the necessity of redisplaying the  images  Comments about the sky condition and quality  appearance  and content of  the images are very important     MIRAC LOG CRYOSTAT Date Local fas Page    Telescope Program       Capacity    LN2 2 7 liters  LHe 3 6    LHe Lab usage    Full Empty Fraction Left Hold Time Quiescent Lab            Powered Lab IRTF  23 5 6 in  30    5 6   level   60 deg tilt x  90  LN2 Shut 36hr 36hr LN2Open 36hr 36 hr  7 2 11 8  22 x  11 8   level   60 deg tilt x  67  meee 40 42 36 38   8 liters cool down and fill 4 liters per day transfer thereafter    W F H  May 22  1999 3    MIRAC LOG SETUP Date UT     Page 2    Telescope Date Local Day  Program       Camera Orientation  Window Points  circle direction   North South East West                     Display  NESW  Up  Let    Orientation   Yes No  Flip Vertical Flip Horizontal Transpose  000       Magnification       Pixel Scale 0  Pupil       Dichroic Adjustment Ra  De 00000000000    f chop wai    Chop Throw 000000000            Noa war
133. Web with the address   http   www  jach hawaii edu homestuff weather html    A22 6 CSO Tau Meter Data for Mauna Kea  Mauna Kea Tau Meter and other useful data can be obtained from     http   www cso caltech edu  CSO Hawaii Weather Page  Tau Plots    240 MIRAC User s Manual    5 22 99    A23  Observatory Addresses        Telephone Numbers 241    Appendix 23  Observatory Addresses and Telephone Numbers    Steward Observatory  933 N  Cherry Avenue  University of Arizona  Tucson  AZ 85721    Multiple Mirror Telescope    Fred Whipple Observatory  P O  Box 97  Amado  AZ 85645    National Optical Astronomy Obs     950 N  Cherry Avenue  Tucson  AZ 85726    Institute for Astronomy   2680 Woodlawn Drive   University of Hawaii   Honolulu  HI 96822   Director  Robert McLaren  mclaren  uhifa ifa hawaii edu   Sec   y  Nancy Lyttle  lyttle   galileo ifa hawaii edu     Dept Office   520  621 2288   Director   s Office  621 6524   Fax  621 1532   Kitt Peak station  621 3359  2 3 m telescope  318 8690  Operators  318 8695  Supervisor  318 8696    Catalina Station   61 inch   520  576 1283  61 inch dorm  576 1311  60 inch  621 7931    Tucson   520  621 1558   Fax  670 5740   Mt Hopkins Station  621 7933  Fax  670 6758    Office   520  670 5701  629 6741    Tucson   520  318 8000  Kitt Peak Station  318 8600  4 m telescope  318 8620  2 2 m telescope  318 8630   Fax  318 8724    Office   808  956 8312  Fax  988 2790  Hilo office  933 4873  Hilo Fax  933 4875  Dining room  935 7606  HP fax  934 45
134. a mean gain of unity over the unmasked portion of the array  When multiplied by the  difference between two chop half cycles  it removes the pixel to pixel gain variations in the detector  array     Header   the set of parameters that totally define how the data is taken and the program is operating   This includes all the camera operating parameters such as frame rate  integration time  etc   observing  modes such as chop and nod  and other changing parameters such as time  detector and electronics  temperature  airmass  etc  Some of the header parameters can be edited in the OBS  Header menu   When the data is saved to the disk  these parameters are written to the head of the data file  followed  by the pixel data     Header file   the file that stores operating parameters of the MIRAC program  The file includes all  the parameters that are written to the header of the data files  plus other program values such as the  current data directory  number of printers defined  current display mode  etc     Image   a set of coimages co added by the MIRAC array processor board   Image Display Buffer   the array in the program where the currently displayed image is stored  If in    the CURRENT display mode  this array contains the calculated image from the most recent  observation  If in some other display mode  e g   MOSAIC  NOISE  etc    the image display buffer    102 MIRAC User s Manual    contains the result of that operation  Image data must be in this array before it is displa
135. a value 1 to     regardless of how the  data was flipped on the main display screen  When starting the display  the user is asked which row  or column is to be displayed  The data are then plotted  and a number of options are available  The  same options are present in all 1 D display modes  including Slice  Frequency  and Histogram  modes     A Gaussian or Moffat fit may be performed on the data in the 1 D mode  as indicated above in  Section 11 2 7 3  After the fit is complete  the fit function is plotted on the same plot as the data   It can either be plotted with the same number of points as the data  or at the maximum number     86 MIRAC User   s Manual    showing the  interpolation  between the data points  The full function is drawn  in cyan   along with  the background terms alone  in red      Options  Setup Redraw Value Hardco Output  EIJ Exit    90 0  80 0  70 0  60 0  50 0  40 0  30 0  20 0  10 0                 10 0     10 20 30 40 50 60 70 so      400 110 120 130    Row Co lumn  Gaussian Fit    Peak   7 578E 1 Xpos   63 9822 FWHM   2 6960   Const  1 109 Linear  3 736E 2 Quadr  1 975E 4 ChiSar  1 020E  1  OBS  4 05 96 15 28 38 c960405a  001 SIMULATED STAR IDLE 0 00 0 02 0 5  DISP  4 05 96 15 16 57 76 Data not saved SIMULATED STAR Mode  Current    Figure 11 3 The Slice Display Mode     11 2 4 Frequency    The Frequency mode was added as mainly a diagnostic tool  but may have other uses    It is similar to the SLICE mode  but instead takes a FFT of the data in the r
136. ace with  the MIRAC control room setup  Leave the two screws in the holes in the electronics with some tape    to keep them in place or  alternatively  place in the Camera Assembly box     15  With an allen wrench  loosen and withdraw the captive screws on either side of the cryostat  mounting plate  Carefully lift the cryostat off the guider box bracket     16  Secure the cryostat window cover over the cryostat window   17  Screw the rectangular cover plate over the opening in guider box   18  Pour residual LN  and LHe from the cryostat     19  Return the tools used to the Camera Assembly plastic box and return the box to the control  room     Removal of Guider Box    20  If the on axis TV camera has been used  remove the camera from the shelf on the guider box   This is done by removing the bolt underneath the shelf holding the camera in place and loosening the  two locating screws on one side of the camera bracket  Store the bolt and washers in the Guider Box  Assembly plastic box     2   Using an allen wrench from the Guider box assembly plastic box  remove the 6 socket head  screws attaching the TV shelf bracket to the guider box  Slide out the bracket and store the screws    in the marked envelop in the Guider Box Assembly plastic box     22  Screw the small cover plate over the opening in the guider box     5 22 99 5  Start and End of Run Setup and Shutdown Check Lists 29    23  Position a lift cart under the guider box  Using the large allen wrench in the Guider Box  
137. acking number   800  238 5355  Federal ExpressWorld Wide Web address  http   www fedex com     For the Tucson FedEx depot on East Columbia  the FedEx Depot Gate Code is 36011     164    Useful Addresses   William Hoffmann  Steward Observatory  UA  933 N  Cherry Ave  Tucson  Arizona 85721  Phone  520  621 6529    whoffmann  as arizona edu    Leslie Feldman  Smithsonian Astrophysical Obs  60 Garden Street   Cambridge  MA 02138   Phone   617  495 7428  feldman  cfa harvard edu  A13 2 Shipping Crate List  Crate 1   Crate 2   Crate 3   Crate 4   Crate 5   Crate 6   Crate 7   Crate 8   Sometimes shipped   Crate 9     Weight Correction    Total Weight    Crates 1 8 765 lbs    MIRAC User   s Manual    Paul Jensen   IRTF  Bldg 393  1175 Manono St  Hilo  Hawaii 96720    Phone  808  974 4206 Office  974 4209 Summit  jensen G herschel ifa hawaii edu     Tucson Office Depot   Federal Express   3601 E  Columbia   Tucson  AZ 85714    520  294 0037  Airport     Support Equipment  Gray Polypropylene 90 Ibs 30x25x26h      52 Ibs  4 12 97     A complete shipping inventory is given in Section   13 4     Andy Adamson   Joint Astronomy Centre  660 N  A ohoku Place  Hilo  HI 96720    Phone  808  935 4332  a adamson   jach hawaii edu     Hilo Office   Federal Express   500 Kalanianaole St   Hilo  HI 96720    Guider Box  Yellow Fiberglass 18x34x22h 120 165 3 3 93    Camera Electronics  amp  Cryo Kit  Yellow Fiberglass 18x34x22h 107 Ibs 3 3 93   Cables  amp  4 liter Dewar  Yellow Fiberglass 18x34x22h 
138. age  tempmask   Warning  Cannot access image  tempfrst   Warning  Cannot access image  tempframe     Warning  Cannot access image          Image  tempbigl  real    gt  Ima tempbigl  double   tempbigl   gt  tempfrst   tempbigl   gt  temptmsk   tempbigl   gt  tempsqr   Now processing file  1921210   200  tempbigl   gt  tempframe   tempbigl   gt  tempmask   1921210   200   gt  tempframe 71 200 22 105   bigmask   gt  tempmask 71 200 22 105    Now processing file  1921210a 201  tempbigl   gt  tempframe   tempbigl   gt  tempmask                Warning  Cannot access image  temptmsk      ge                   1921210a 216   gt  tempframe 82 211 30 113    bigmask   gt  tempmask 82 211 30 113    ataull7     tempfrst   tempsqr     ataull7 sg4 function  sqrt   Image  ataull7  double    gt  Image  ataull7  real    Image  ataull7 sg4  double      Image  ataull7 sg4  real        cl   displ ataull7 z2 50  36  Coments    1  change directory to location of data files    2           programs and scripts to current directory    3  Initialize packages and scripts necessary for processing    4  Convert grab observations at 1 and 2 airmass to FITS files    5  Read files into IRAF files  Enter any name for the  IRAF filename   the    name gets changed to the  i921210a 200  style name that is in the FITS  header                                            6  Remove the FITS format airmass files  we will not need them further    7  Make    list of all the files read into IRAF    8           the list to
139. al input  This a separate cable with  a small metal filter box in the middle of it  The small black ground shorting stub should  always be in place on the branch of this cable  One end goes to the electronics connector  panel  The cable clamping screws must be inserted and tightened snugly at the connector  panel  The shorting cap at the cryostat must be removed and stored in the cryostat  assembly box  The cable should be connected to the cryostat connector while maintaining  hand contact with the cryostat to avoid static electricity sparks    Temperature sensor heater from temperature monitor to cryostat temperature connector  This is  stowed under the electronics top cover    Filter controller  box under camera electronics  to cryostat switch connector   Filter controller to filter motor connector at base of cryostat  cable clamping screws must be  inserted and tightened at both ends      Cable Bundle Camera End       The captive beige velcro straps on the cable bundle should be opened to separate the cables near  the end of the bundle  The cable should be securely attached to the electronics box with the three  velcro straps     Power cable camera electronics power connector  Note  the power supply should be first  turned on and the indicator lights checked while the shorting stub connector in on  the cable  before the cable is connected to the camera electronics    Data Command fiber optic cable to camera electronics fiber optics connectors  red or orange are  command  b
140. alculation  Dos Shell  Unpack FastData files  Rebuild LOG file  Arrange data into lines  Exchange columns to fix  Calculate STD DEV image                           gt   m   v    gt     or image  image                         F Syst       Dos Version  6 22  Memory Available   Coprocessor   Drive capacity   Drive free space     Press any key             m Info       985376  using 80387  63963136  24852480    1                       Column to display  Output File name   Frame number  0 for all   Data file String   Type of data output  Begin Output                Skyflux                                                 5 File Output      4  Expansion factor 1  Output                extension    Frame number 0  Data Input files   Source List ALL CAT  Force AMass Calculation Off  Interpolate Bad Pixels Off  Begin conversion to FITS                          Errors                    of data    Temp  Skyflux              Value  RMS   L    output                                     5 22 99   12 3 UTIL  Command Line Menus 159                    calculation           FastData Files             AMass files     High AMass files              Output File Directory        Begin Gain calculation      L   L           Data file String    Begin Output                LL L       J               1    Rebuild Log Fil                            x  Enter data file directory  d  datal   d  datal    Enter output file name     i          5         Map iC NEED   Data files     Use on source frames off     
141. am or the  offset amounts  The operation is the same for the MIRAC user as when using the RS232 command  mode  the offset files can be used  etc   and all the observing modes are supported  Only nod and  offset commands are available using the Ethernet control     74 MIRAC User s Manual    9 10 4 Offset Modes and Taking Data    There are two possible offsetting modes   Absolute  and  Increment   The first mode means that the  offsets values entered are the absolute displacement from the zero position  If an image is taken at  offset  0 0   and then at  3 2   the second image is shifted relative to the first  If a third image is also  taken at  3 2   it 1s aligned with the second image  In the  Increment  mode  offsets are entered in  the telescope command menu that are executed every time a new set of images is begun  Therefore   if the offset increment is set to  1 5 2   the first image will have an offset of  1 5 2   the second image   3 4   etc   relative to the starting position  The  increment  mode is useful for scanning across a  source with a constant step rate  The offset value in the header for the increment mode will continue  to show the total absolute offset relative to the zero position     The absolute offsets can be entered in pixels or in arcsec  The user enters one  and the program  calculates the other  The values are stored in the file headers as pixel offsets  since that is the  information necessary to properly align the individual observations  The tran
142. ample Mode is set to Dbl2Sampl  the display  can be selected to display the before and after reset on a single line  as it appears on an oscilloscope   or on separate lines so that the signal and reset levels can be clearly distinguished  This is a very  useful diagnostic mode for array performance     When exiting the scope mode  the camera parameters are automatically returned to the observe  header parameters  As a consequence  if the I O program has not been initialized and or the camera  is not operating  the program will lock up and the MIRAC computer must be rebooted  This can be  prevented by executing OBS  Init Simulate Data On     12 2 Temperature and Heater Monitor    This utility provides for continuous  real time display of the detector and thermistor temperatures   as well as the current and heater power  The sample interval can be chosen in 1 msec increments   For each sample  five A D reads are performed and averaged  The detector and some of the  thermistor temperatures are displayed on the default screen  but this provides a way to monitor the  situation more closely  The heater power value is based on the calibration of the temperature monitor  output and A D conversion  assuming a heater resistor value of 25        12 3 Camera Control and Testing    The commands in this menu allow the user to send various commands directly to the camera  electronics  Most of these commands are used during the normal operation of the camera  to set  operating parameters  st
143. and Track command    A  RA Bias Rate  B  Dec Bias Rate  Cx  D       urn Tracking ON  urn Tracking OFF                i                               Nod Beam Control   2        A  Switch Nod Beam 0  B  Change current MIRAC def   C  Beam 1  RS232 mode only    D  Beam 2  RS232 mode only    E  MIRAC Generated Nod Off  F  RA Nod Vector 0  G  Dec Nod Vector 0                             Tele  OFFSET          SO RS232  PLUSPULSI  NEGPULSE  EVEL  ANUAL  thernet  KIRT RS232                                                                  p  Offset control parameters     5                      Command tel  offsets On  Offsetting Mode Absolute  R A  Offset Incr 0 00  Dec Offset Incr 0 00  Offset delay  ms  3000  Anti Backlash offsets Off  RA Abklsh  sec  RA  0 000  Dec Abklsh  arcsec  0 00  Abklsh delay  sec  0 00  Tel Offset com Guided offset          152 MIRAC User s Manual    A12 2 DISP  Command Line Menus    DISP  Init Load Header Begin Refres Clear Save OBS UTIL PRN Quit    A12 2 1 DISP  Init                                                                                                                                                                                                 1                                                  of         1                   of Display Array      Stats and Fit Parameters   gt  Header    Orientations  Directions   gt   Log File    Colors for Screen Display    Array    BLIP Calculation Parameters   gt  L Ji  Magnified Display       Width  FWHM  D
144. ar  the end of the bundle     Camera power cable to power supply   Filter controller RS 232 cable to filter controller  COM1  RS232 connector on PC   Temperature monitor cable to A D Digital I O Interface   Data Command fiber optic cable to fiber optic connectors at back of PC  Red or orange are  command  blue or white are data    Filter controller AC power cord to camera power supply switched AC outlet    Cable Connections at Camera       CAUTION  At all times when the cryostat is not connected to the camera electronics  the  connector caps with conducting foam should be on the cryostat signal and clock  connectors  When these caps or cables are installed or removed  care must be taken to  keep hands in contact with the cryostat case to prevent static electricity discharge to the  connectors     Signal cable  short length of 16 coax cables  from electronics to cryostat signal output  This is  attached to the electronics preamp and stowed inside the top of the electronics box  The  small black ground shorting stub should always be in place on the branch of this cable   The main connector on the cable must be disconnected from the test signal connector  The  shorting cap at the cryostat must be removed and stored in the cryostat assembly box  The  cable should be connected to the cryostat connector while maintaining hand contact with  the cryostat to avoid static electricity sparks     192 MIRAC User s Manual    Digital  clock and bias  cable from electronics to cryostat digit
145. art and stop integrations  and resetting  These commands proved useful while  debugging the system  One of the selections called  continuous reset  sends master reset commands  to the camera as fast as it can  until the user presses a key  This was useful when debugging the serial  transfer interface  One could trace the progression of the data words through the interface  giving  the oscilloscope a fairly high trigger rate for easier viewing     Also in this menu is an option to ignore images  This option causes the PC not to process or save any  of the data being taken  Again  this was useful when debugging the camera system  because images  were taken and sent from the camera at a much higher rate than if the PC was storing the data     The Display Data option in this menu is a help when testing the signal processor boards  This display  shows the first couple columns of data in the SKY board buffer  in hexadecimal format  One can    5 22 99 12  Utilities 95    watch the buffers to see the image build up from many coadds while the integration is taking place   From this display  one can see if certain bits are not functioning  etc  The data is displayed in the  same format as is directly sent from the camera  So if the camera is in double sample mode  there will  be two values for every pixel  for before and after reset     12 4 ASCII Output    This utility provides a way to output some of the header and data information into a text file that can  be later processed by ano
146. at on table right side up  Window cover should be on window    Close LN  shutter  Remove LN2 and LHe vent tube fittings    Withdraw magnification  LN  shutter  and pupil slide actuators    Remove cryostat mounting plate with 5 32 allen wrench  Put screws and spacers in large  compartment in Cryostat disassembly plastic box     If top support block has been removed  for the IRTF  reinstall it  The block and screws are  stored in the camera setup box     Slightly loosen 8 5 8 inch 8 32 cryostat extension socket head screws with 9 64 inch allen  wrench  If the entire case is to be removed  loosen the top screws as well     Invert cryostat on table    Remove 8 5 8 inch 8 32 socket head screws on cryostat base plate with 9 64 allen wrench  Put  screws in an empty compartment in Cryostat Disassembly plastic box  For remaining  disassembly  each different sized screw should go in a different compartment    Carefully remove motor assembly and set aside covering with a plastic bag  Do not remove  carrying straps from base of motor assembly   O  ring should be in groove on base plate   Do not set any pieces on      ring surfaces     Remove 8 socket head screws holding cryostat case extension  Remove extension  being  careful no to damage aluminum foil on inside surface  and set aside  on its side  not on the    224     9      10                User   s Manual     O  ring bearing surface   Keep hands off inside surface  Remove          ring before is falls  into the case  The ring can b
147. ation file  does the  specified chop and or nod subtractions  masking  flat fielding and application of the gain map   expands the map if desired  and then writes the FITS image  If the expansion factor chosen is a factor  of 2  then the shift between array halves is properly taken into account  All pixels that are  bad  or  have no data  in the gap between array halves  are set to zero  This alerts the data processing  programs not to use these pixels when combining images for the final map     The input files are in the standard naming convention  1      CYYDDMMA nnn  where nnn is a number  from 001 to 999         output files will have the same extension number as the input file  so the eight   character name should be different from the input  The convention used is to make the new name the  same as the old  to retain the year and date information  except for the first letter  which is changed  to an  F   to represent FITS file  Also  it is a good idea to specify a different directory for the files    96 MIRAC User s Manual    to be written to  so that the original data directory is not filled up  and there is no chance of  overwriting files     When using this utility  the images will be rotated so that the FITS file output has the proper  orientation  with N at the top and E at the left of the image  This is done according to the current  program settings of the N and E directions  and the X and Y flips in the DISP  Init menu  For  example  if the N arrow is pointing up
148. center   6 5 6 5   6 5 6 5   6 5  6 5  6 5  6 5  00    MMTNULLS OFF  for measuring focal plane scale at MMT nulling aperture with four points in corners of array   33   33   3  3  3 3  00    STD5 OFF  for putting standard star in four quadrants and center of array   10 10   10 10   10  10  10  10  00    5 22 99 7  Observing Procedures and Check Lists 47    STDSKY7 OFF  as above plus two off source sky positions for noise   0 50  0 50  10 10   10 10   10 10  10 10  00    SMALLS OFF  for moving      extended object a small distance on the array   22   22 5   2 5  2 5  2 5  2  00    TINYS OFF  for very small dither for very extended object  or slightly extended object in all four chop nod beams   11   11 5   1 5  1 5  1 5  1  00    JUP6 OFF  1 70  10  00   10   170  00    7 7 Focus Settings    The telescope focus is optimized by having the telescope operator manually step the focus setting  while monitoring the peak flux or FWHM ofa star  Typical setting values are given in Table 7 3     Table 7 3 Focus Settings  IRTF Focus  Temp    C  Setting  2   07   2   07  S O  2 3 m    1 500    48 MIRAC User s Manual    7 8 Acquisition of Star and Focus    Most telescopes reliably acquire stars so that the image should be in the MIRAC field  typically 40  arcsec at IRTF  However  if the telescope configuration has been changed and the focus and initial  pointing is uncertain  acquisition of a star can be difficult  For acquisition and focus  MIRAC should  be set as follows     Obs  Mode  C
149. ck lists for  shipping  setup  preparation  observation  data reduction and  maintainance  The asterisk     indicates subjects most useful to  review before an observing run     Subject Chapters Appendices  Organization of the manual and performance   of MIRAC     lt       2   Preparation for      observing run    mmc   Al     5    Setting up and shutting down for a run and       for a night of observing 55 546   Observing with the camera mes PP Vu A6   Quick look display and processing Toc 3   Post observing data reduction A7   A10  MIRAC files and menus All   A12  Shipping and setup A13     15  Trouble shooting and service   16   A19    Unix commands  tape backup  weather  and  address information A20     24    5 23 99 Contents i    Table of Contents   List of Pigutes         Xue ee es    v cate cae             vii  List of Tables    ponesi PE viii  1  Organization of MIRAC Users Manual                                        1 1  2  Overview and  Performance     esu qaom ed rdc R4 V E n      Re ERE             3  2 1 MIRAC  on the World Wide Web                                       3   2 2 General Description of                                                     3   2 3 Magnification and Pixel Scales 522552515 ey bad Hb              ER E ERAT 6   24 Filt  r          resistent           ei                            ehe RO 7   2 5      16 Array and MIRAC System                                                  7   2 6 Background  Sensitivity  and                            
150. cle  with  about 2 seconds of settling time required for each nod motion  and to provide a reasonable sensitivity  for an immediate display of a single observation  For moderately bright sources   gt 1 Jy arcsec  at the  SO 2 3 m  or 500 mJy arcsec    at the            the integration time is just long enough to show a good  signal to noise  S N  image of the source in a single observation  One or two observations are taken  at a sky position  then the telescope is offset slightly for the next observation  Typically  20 50 or  more observations are taken for a faint source  depending on the source flux and the desired signal to   noise     It is possible to freeze the motion due to seeing and chopper vibrations by using a short integration  time  equal to one chop half cycle  In this case a poor duty cycle can be avoided by accumulating a  large set  10 50  of chop image pairs in each nod position  This can be done by using the MIRAC   fast data  mode  If there is a bright enough source in the field  the images        be processed later by  shift and add     For an isolated source which is much smaller than the array field  the signal to noise can be improved  by a factor of two for any given observing time by putting the source in all four chop nod beams   This is done by selecting chop and nod throws of about 20 arcsec  so that the chopping and nodding  causes the source to appear once in a different quadrant in each of the four beams     Observations can be made with chop 
151. coimages can be sent to the DSP at a rate of 56 Hz and 1 16 of the array at  a rate of 800 Hz  The camera controller generates the telescope secondary chopper motion and wait  times synchronously with the read and frame times  The coimaging and chopping can be intermittent   stopping between observations or during nod waits  or continuous  The PC and array processor  control the data acquisition  storage  processing and display  and initiate telescope motions via  Ethernet or RS232  The data can be stored both on the PC hard disk and on a facility computer disk  via the Ethernet     5 23 99 2  Overview        Performance          AOLLON         S3iMOlVHOBY QIAVYANI 30       AdVvisldd0ud  ALNVUMOdRT     NOISSINY3d A8 SI L33HS SIHL NO  Q3NNINOO   1  0 30 385012510 80 ISN                                                  35                                                                                                        an  i          IH     La           NEL M  8                 BEES   amp       amp  B   a Sz                           _ 6  al 3  3  aal F     8  8  8     3   gt          T     O 8  X a      N         3  lt                  Cis         9 NE  REA  S 234  2           o   Q  9  35 p  z          Cc  28 S  SEC ar E  A   SBD      O ss  gt   2N      2  AlN         gt   IN  SST   gt   58     c BU  Se  I   amp              4TH BLOCK   FILL PORTS IN LINE  6 PIN CONNECTOR  18 PIN CONNECTOR  RIGID SUPPORTS  NITROGEN VESSEL  CASE   HEAT EXCHANGER    RIGID SUPPORTS    COOLIN
152. cope collimation  It is desirable to check this by observing out of focus images      5 3 End of Run Shutdown Tasks   5 3 1 Initial Control Room End of Run Tasks   1  Complete nightly shutdown tasks  Section 6 2     2  Photocopy any MIRAC log sheets not already copied for the observers  Gather all the original  log sheets including cryogenics log and worksheets from the MIRAC log clip board and or the  three ring binder marked  MIRAC Current Log  and mail to Bill Hoffmann for the MIRAC archive   3  Mail DAT backup tapes for the run to Bill Hoffmann for the MIRAC archive     4  Pickup and organize the MIRAC work table     5  Shut off PC power when backup tape is complete     5 3 2 Telescope Chamber End of Run Tasks    1  Collect from the control room on or next to the MIRAC power supply   1  Camera Assembly plastic box with  Two MS connector shorting caps  Fiber optic end protecting tips    5 22 99 5  Start and End of Run Setup and Shutdown Check Lists 21    Miscellaneous tools    2  Gray foam cable end protector marked  Camera  containing the Green Elco cable end  connector  male  with pins shorted together    4  MIRAC velcro cable straps mounting board    5  Round plastic container with short pieces of blue nylon string     6  Two round and one rectangular cover plate for guider box openings    If the guider box is to be removed     7  Guider Box Assembly plastic box with  Tools and screws for guider box installation    Removal of Cables    2  At the telescope  remove the tw
153. ction  If the selection alters a parameter  the current value  of the parameter is displayed  If the selection executes a function  there will be a blank space on the  right side of the menu across from that item  Again  there are a number of ways to choose a  selection  One way is to use the up and down arrow keys to move the highlight bar to the desired  position  and then choose by pressing ENTER or the PageDown key  Another way is to type the  first letter of the selection  However  if there are more than one selection with the same first letter   the first one on the list is always chosen     5 22 99 9  Using       MIRAC Program 65    OBS  Init Mode Header DESS Run Wait Save Tele DISP UTIL PRN Quit    Obs  Mode   Chop Log S av  OnOff Off RA  0 00  Chop  lt    gt       10 90 AMBT emp  9 53 Off  Dec   0 00  FrT imet ms  gt   19 661 EleTennp  22 68 Fitter  1  11 7 pm  Burst Mode  ON A DT emp  44 84 Filtr 2  Open  IntTimecs  gt   0 98 DetTemp  5 005 Wavelth  11 70    RAUG  3 063  5 gt  Next Observation  hObject          Simulated Star  Wave leng DO    4  Integration time 0 983  Frame Time Cms  19 6608  j Chop  Nod Mode Chop   G  Save all observations Off  How many Obs per run 16  Read offset file         Use command file            Link Frame Filter sky frm  z Macros   7005 Shell          current position             o  Section Full Map  Data gt  Max  3 40  lt  64  64 gt  Dnin   1 40   113  16 gt   Fit gt          3 40   63 96_63 97  FWHM  3 08         5    0 002  Total RMS 
154. d in the OBS  Mode menu of the MIRAC program  The first choice  that must be made is whether to use the secondary chopper  The CHOP mode must be selected if  the chopper is to be used  The GRAB mode is defined as taking an unchopped image         second  choice that must be made is whether to send NOD commands to the telescope  This command causes  the telescope to offset to some predefined off source position  There are two nod options  a  two  beam nod  and a  four beam nod   which are used with and without the chopper  When an  Observation is saved to the disk file  all off source images in the set        saved to the same file  Then  when an image is read from disk and displayed  the off source images are properly subtracted to show  the source  The data taking options are described below     9 9 1 1 Grab    This mode takes a single image with no telescope motion  This is selected by setting the Grab Chop  switch to GRAB and setting the nod mode to OFF  This mode is usually used during an observing  run to take data to be used in calculating the gain map     9 9 1 2 Chop    This mode runs the secondary chopper and stores 2 images to the data file  one for each chopper  beam  This mode is selected by setting the Grab Chop switch to CHOP and setting the nod mode to  OFF  The  On Source  beam can be selected in the OBS  Header Observing Parameters menu as  either 0 or 1  corresponding to the 0 or 5V logic level output of the chopper bit from the interface  box   This designa
155. dard Error and Output  gt  amp     Standard Error Separately   command  gt  output    gt  amp  errorfile    Pipes   Pipelines command   filer    filter       Duplicating Displayed Output command   tee filename    Filters    Word Line Count we   1     A20  VMS  DOS  UNIX Command Reference 231    First n Lines head   n   Last n Lines tail   n   Skip to Linen tail   n   Show Nonprinting Characters cat  v  Sort lines sort   n   Format Paragraphs fmt  Reverse Character Order rev  Multicolumn Output pr t  List Spelling Errors spell    Substitutions in Output Stream  sed  e  s pattern  string   g      Report Generation awk  2 3  Searching with grep    grep Command grep  pattern  filename    command   grep  pattern   grep Search Patterns  beginning of line    end of line  any single character  single character in list or range        character not in list or range           Zero or more of preceding character or    pattern    zero or more of any character     escapes special meaning      3  C Shell Features       3 1  History Substitution    The History List  Set Up History List set history n  See History List history   h     Event Designators    Repeat Previous Command      232            User   s Manual    Display Previous Command Ip  Command Line n In  n Commands Back l n  Command Beginning with str Istr  Command Containing str   str     All Arguments to Prev  Command     Last Argument to Prev  Command I   First Argument to Prev  Command Ls  n th Argument       Word Designators   
156. data  This allows the user to sort  out images for which the source is off the array  the sky noise or background level has changed  or  there are any other problems with the image  Depending on the options set in the DISP  Init menu   the statistics and fit will be displayed  The header information from the image file is displayed on the  screen where the observing header is usually displayed  This is the only function in which the  previous data header is displayed here  After the Replay function is complete  the header display  reverts immediately back to the current observing header     There are a number of options in this mode  First  a range of images can be entered in the usual  shorthand notation  The entire chopped  nodded  etc  image can be displayed  or a single frame from  the set can be selected  Any gain  mask  or flat field that is active will be applied to the data  Finally   a pause between each image can be turned on or off  In any case  the mode may be interrupted at any  time by typing  Q  to quit  After the mode finishes  the last image displayed is left in the image  display buffer     11 1 4 Operation    This mode has the capability of loading individual files  or performing simple math operations with  raw data files  When doing operations with observation files  they must all be the same size  The   Operation  calculation is done without any offsets  If they are active  the gain or flat field operations  are performed on each individual file as it is
157. description of the design and performance of MIRACI and             can be found in the  articles   MIRAC  a Mid Infrared Camera for Astronomy   W  F  Hoffmann  G  G  Fazio  K   Shivanandan  J  L  Hora  and L  K  Deutsch  Proc  SPIE  Infrared Detectors and Instrumentation   1946  449  1993 and              2  a mid infrared array camera for astronomy   W      Hoffmann  J  L   Hora  G  G  Fazio  L  K  Deutsch  and A  Dayal  Proc  SPIE  Infrared Astronomical Instrumentation   3354  647  1998    MIRAC3 is    Mid InfraRed Array Camera built for ground based astronomy at Steward Observatory   University of Arizona and Harvard Smithsonian Center for Astrophysics  It utilizes a Rockwell HF   16 128x128 arsenic doped silicon blocked impurity band hybrid array operating in a liquid helium   cooled cryostat at 5     It has an operating wavelength range of 2 to 26 um  The relative quantum  efficiency over this range is given in Figure 2 1  Using 16 parallel readout lines giving a frame rate  up to  92 kHz  the array provides both low noise and good linearity at high background flux  which  are essential for 10 and 20 micron ground based observing conditions  The array has a peak quantum  efficiency of approximately 0 42 at 22 um  and full well and linear well sizes of 2 4x10    and 1 6x10     electrons  The quantum efficiencies at 2 2  5  and 11 7 um are approximately  05   25  and  36     4 MIRAC User s Manual    Figure 2 1 Relative spectral quantum efficiency of the Boeing Si  As BIB 
158. directory  e g   D  D941209        All observations from current session  e g   C921209A 001   Processed observations    Files that should be in the SSAO directory       The Smithsonian Star Catalog    Files that should be in the UNIX directory       AIRCOR TARWRITE  AIRMASS AIRCOR C  DEALLOCA AIRMASS C  MRC2FTS FITSIO C  OBSLIST MRC2FTS C  TARLIST OBSLIST C    TARREAD FIOCOM H    5 22 99      12 1  OBS  Command Line Menus 145    Appendix 12  Command Line Menus    A12 1 OBS  Command Line Menus    OBS  Init Mode Header Next Run Wait Save Tele DISP UTIL PRN Quit    A12 1 1 OBS  Init             F Observe INIT    Camera Init   I O Init  DSP board   Log Options   Data File Dir   Backup data Dir   Name of DSP Program  Simulate Data   MIRAC Settings File  Program Values                Le    d Nd941209  i Nd941209    c  mirac mirac dsp         CURRENT   HDR            gt                      Simulate Data   File for SimSource  Use Source file   Load SimSource File  Normalization factor       Width  FWHM  of source 3 000    Off               jupiter chp  Off    2 000          L                 Record Log   Log File 12 09 94 LOG   Scan Log file        Insert current Header                   J          Telescope COM port  Baud Rate  Tel  COM  Parity  Tel  COM  Stop Bits  Tel  COM  Word length  Tel          Alt  Tel  com file                RS232 CHKSUM mode  Min  Chop Wait cycles                     rogram Values    Filter Control COM port    TCS command confirm mode Of                
159. dius is too small  no stars will  be found for that object  SAO stars will not be found for STD  SAO  or BST object types  The star  coordinates are accurate to about one arcsec  and the proper motions to 1 arcsec century     Some examples follow     obslist sources cat  a 14 23 34 3  23 12 11 02 0 23 1 12 STD 1950 0 STAR1  s    the above star is added to the end of the list  then the list is sorted and the output  catalog sent to sources cat  overwriting the old file     obslist sources cat  a  s  p  t sourceT cat  gt  sources lst    the sources cat file is read in  then the program goes into interactive  add source  mode  to allow the user to type in a number of objects  then sorts the objects  makes a file  SOURCET CAT for use on the telescope  and prints a listing of the sources  The  listing has been redirected to the file  SOURCES LST      OBSLIST was written in C for a PC  but can just as easily be run on other systems  such as Sun  computers  To compile the program on a PC using Microsoft C compiler vers  5 1  use the following  statement     cpl  F 9000 obslist c  On a Sun  use the following command   cc obslist c  lm  o obslist    The size of the arrays set in the program below can be changed to increase the number of sources  allowed using the parameter MAXSRC in the program  In the case of the PC  the stack size may also  have to be increased  the  F parameter above   For other systems  some tweaking may be necessary   but the program uses fairly standard C  so it
160. dow orientation  Secure with the three Velcro straps     33  Place the plastic bag over the cryostat   34  Lay the cryostat into the foam  cradle  in the crate orientated according to the markings on the    foam  It is a snug fit and requires some adjustment of the foam  Check that the short length of  vacuum hose is in place  Insert the top foam piece and close the crate     30 MIRAC User s Manual    Packing the Guider Box  35  If the guider box is to be packed  it goes in MIRAC Crate 1  Follow the instructions in the  Shipping Inventory  A13 4   5 4 Complete Shut Down and Packing  If MIRAC is to be packed for storage or shipping  disconnect all cables in the control room  the  power connector last  installing optical fiber protectors and the cable end sheath as at the camera end   The fiber optics couplers belong to MIRAC and should be placed in the Computer Setup box   Remove cable bundle from its supports in the telescope chamber  returning all velcro straps to the  MIRAC velcro cable straps board  Carefully thread the cable from the control room into the  telescope chamber  Return the cable to its crate in reverse of the setup instructions  Section A14 6      Pack MIRAC according to the shipping inventory  Section A13 4     If MIRAC is to be shipped  follow the instructions in Section A13 1     5 22 99 6  Nightly Startup and Shutdown Check Lists 31    6  Nightly Startup and Shutdown Check Lists    The convention for indicating MIRAC program commands in this and subsequen
161. e  and then the  observation 15 started  The entered offsets        stored in the observation file header  and written to  the observing log     Note that for the calculation of offsets and airmasses to be correct  the proper Right Ascension and  Declination for the source must be entered in the header  The user usually wants to specify small  offsets in arcsec  whereas the telescope requires R  A  offsets in seconds of time  so the proper  coordinates must be entered in the OBS  Header Source Information menu in order for the program  to be able to convert from arcsec to hour angle     5 22 99 10  Mask  Gain  and Flat Field Maps 75    10  Mask                 Flat Field Maps    10 1 Mask Map    The mask map specifies which pixels are to be used in statistics calculations  fitting  mosaic  construction  and many program operations  For display and some operations  the masked pixels are  set to the value zero  When new data is being saved  the mask is applied only after data has been  saved in its original form  Therefore  pixels that are masked during data taking can be later restored  simply by turning off or changing the mask     DISP  Load Auto Mask Edit contains a number of ways to enter and edit the mask  First  pixels can  be set by using the mask editor in  Edit  The editor displays the array pixels on the screen with the  current masked pixels displayed as blocks and unmasked pixels as dots  The cursor can be moved  around the mask with the arrow keys  Typing  S  caus
162. e  images have been combined  All points within the boundaries of the image where no data has been  coadded are set to zero     82 MIRAC User s Manual    11 1 6 Multiple Image Display    It is sometimes convenient to display multiple images to compare different data  different processing   or different gray scale limits  A display of any number partial images can be constructed  as long as  the total array size is 256x256 pixels or less         method uses DISP  Header Source  Information Image coordinate parameters  UTIL  Arith Justify map  and UTIL  Arith X flip  Y  flip   It is helpful for determining the desired portion of the image to set the display grid spacing to 10  pixels line  This can be done by setting the pixel scale to an integral lOths of an arcsec   OBS  Header Filters and Optics Arcsec Pixel  and the grid spacing to 10 x arcsec pix   DISP Init Arcsec grid display Arcsec Grid Lines On  Grid Spacing  arcsec  10 x arcsec pixel   The  initial images should be scaled so that the same grayscale display limits are optimum for all of them   Addition and subtraction of constants must be carried out before generating the partial images     The following example displays in four quadrants four partial images with filenames filel  file2  file3   and file4  partial images  partiall  partial2  etc  and combined image  combine  A 63x63 pixel portion  of each image is used to allow a 2 pixel wide gap between images For this example the first 50 and  last 15 columns and firs
163. e Off  17  Carry out Nightly Startup Task 10   18  Check Printer settings  PRN Init  Printers  Chose Printers PS File psout nnn  Postscript Printer   Current Page 1            Print Option Gray Map    NOTE  The printer selection  Network PS LPT2  can be chosen  but it is slow  It is more  satisfactory to print to a file  which is saved in the observing directory  and print the files to    the network when it is convenient     19  Carry out Nightly Startup Tasks 11     26 MIRAC User s Manual    20  Preparation for Initial Camera Power up   For the first power on at the site  confirm that the cables are connected correctly  Section A14 6    At the beginning of a run it is best to run the camera without the cryostat  using the test signal  If  this is to be done  make sure that the preamp signal cable is connected to the test signal connector  at the top of the camera electronics  Running without the cryostat is described in Section   16 5  If  the camera is to be run with the cryostat and detector  make sure that the signal and digital cables are  connected at the cryostat     The first power up of a run is a good time to check the power supply voltages and currents as marked  on the power supply and described in Appendix 18     21  Carry out Nightly Startup Tasks 12    18   22  Note Nightly Startup Tasks 19    21      23  Dichroic alignment  This is required to make sure that the camera is coaligned with the  telescope  The procedure is described in Section A14 11    24  Teles
164. e detector reset during non destructive reads     5 22 99   16  Checking and Trouble Shooting 209    Figure   16 4 HF 16 multiplexer format     Conversions between channel  line  number  L  and block number  B  and column  C  and row  R  are       given by        Int  L 1  2    8   Mod  B 1  16    1       Mod  L 1  2    2   Int  B 1  16    1 oe  17 07 usec  SOn    FASTCLOCK Manuinn  LINE SYNC      2400         B   Int     1  8    16   Int  C 1  2    1 ENG      FSYNC goes low 2 FSTCLK cycles after LSYNC             L   2   Mod  R 1  8    Mod  C 1  2    1                            0 8 16 24 32  Fast Clock Cycles    A16 8 Camera Timing    The HF 16 requires three standard clocks and one         non standard        for burst mode         standard        A 10 5 HF 16 clock timing   clocks are fast clock  FSTCLK   which advances    210            User   s Manual    the array readout one block each transition  line Sync  LSYNC  which advances the readout two  columns  16 blocks  each transition  and frame sync  FSYNC   which sets the shift registers at the  beginning of the read cycle and controls the reset timing  These are shown in 16 5  The readout  advances one block of 16 pixels with each transition of Fast Clock  Each transition of Line Sync  advances the readout two columns  Frame Sync resets the shift registers to the first block     Each of the clocks runs between a low of 4 0 V  logical 0  and high of 9 0 V  logical 1   In MIRAC2  the rise and fall times of the clocks are
165. e in FITS format      r nl n2   process a range of images  starting with number n1 and ending with n2  In this case  the  file name given to the program should be the  root name   or everything up the file extension      n  do not rotate the data to the normal orientation  N up and E to the left   The default does rotate  and or transpose the data if necessary  This  n option is necessary when processing the data  for the gain or mask maps  since these are applied to the data before rotating or transposing      i  do the column interchange necessary for all data taken between June 1994 and October 1994   This is required for all the Jupiter Shoemaker Levy 9 collision data  but not for any data taken  after October 1994 when the hardware swap was corrected      d outdir   use the data directory outdir as the place to write the output files to  This allows the user  to write the files to a different directory than where the raw data is located      f   the input files are in FITS format  not the default MIRAC3 format      o n   instead of reading all the frames and combining them in the usual way  only read frame n in the  set and write that to the output file  and add a   n  to the end of the output file name  e g    f941224a 001 3       p   the input data files are packed  In this case  the only other option valid is the  r range option   The program unpacks the files and writes them to FITS files  The mrc2fts program must be  then run again with the  f option to expand  appl
166. e left on  OBS  Init Log   The number of observations in a  run is given in OBS  Mode How many     9 8 Filter Wheel Initialization and Motion    The MIRAC program handles the positioning and control of the filter wheels via an RS 232 link to  the motor controller located at the camera electronics  The program keeps track of the current  position of the wheels writing to the file  MIRAC FIL every time the wheels are moved  This file is  located in the same directory as the executable program file MIRAC EXE  MIRAC FIL also contains  the magnification setting  The various commands to initialize and move the filter wheels and set the  magnification are located in the OBS  Header Filter and OBS  Header Optics menus     The filters must be initialized with OBS  Header Filters Init Filters to insure that the wheels are in the  correct position  This should be done when the power is turned on at the beginning of the observing  night  whenever the camera has not been operated for a long time  or whenever there is any doubt  as to the current position of the filters  The Init Filters command sends a  HOME  command to the  controller  which places both wheels in the position defined by the limit switches as home  or position  1  All other positions are relative to this initial position  Occasionally  the program will issue a  HOME command during the normal course of operating the filters  to help insure that the position  of the wheels is accurate     The switches on the filter controll
167. e lifted from the grove with a Q tip broken to form a tapered  sharp end  Cover both with plastic    Install the large cardboard MIRAC cryostat assembly skirt at the LN  radiation shield case  interface in order to prevent screws from falling into the cryostat  The skirt is located in the  MIRAC Working Files Cryostat Assembly folder  Remove 3 16 inch 4 40 screws holding LN   radiation shield using screwdriver and tweezers  The Craftsman 1 8 inch screwdriver is best for  loosening the screws and the large blade jeweler s screwdriver and fine tipped tweezers best for  removing them  See Reassembling Cryostat  Section A19 7  for instructions for removing LN   radiation shield bottom  Using gloves gently rock and pull radiation shield to loosen it  It might  be necessary to pris the shield on the right and left sides with a screwdrive and penny or nut as  a fulcrum  Remove it and set the shield aside  The three filter wheel drive rods will be attached     Install the smaller cardboard MIRAC cryostat assembly skirt at the LN  radiation shield    LHe shield interface    Remove the circle of slotted 3 16 inch 4 40 screws at the base of the LHe radiation cover    Remove the circle of slotted 1 8 inch 2 56 screws 1 2 way up LHe radiation cover    Remove LHe shield  using gloves and gently rocking and pulling     A19 2 Removing the optics and filter wheel assembly     1    2      3    4      5      6      7     Put on grounded wrist cuff     Using Scotch Magic tape  lightly tape the s
168. e not suitable for photometric calibration  but still are useful such as IRC 10216   the brightest non solar system mid IR source  and Mu Cep  The tables give the magnitudes ordered  by right ascension and both magnitudes and flux density in alphabetical order     Bright mid infrared sources are generally cool stars with complex broad atmospheric absorption  features which make the magnitude at a given wavelength dependent on the band width  They often  have dust envelops which provide additional emission or absorption bands and make many of them  non  point source    objects  Also  many of them are variable  The notes in Section A2 2 give some  details about these problems     The entries in the table marked  MIRAC  are taken from selected sources      Gezari  Schmitz  Pitts   and Mead   Catalog of Infrared Observations Third Edition  NASA Reference Publication 1294  June  1993  Those marked    Cohen    come from Cohen  Whitteborn  Walker  Bregman  and Wooden  AJ   110  275  1995   Those marked Hanner are from a private communication from Martha Hanner May  25  1994  The conversion from magnitude to Janskys is taken from Cohen  Walker  Barlow and  Deacon  AJ  104  1650  1992   This is based on taking the magnitude for Alpha Lyra to be zero at  all wavelengths  It fits closely by an 11000 K black body with corrections for individual wavelengths  which range from  0 017 to  0 016 magnitudes  The zero magnitude flux density can be obtained  from the values for Alpha Lyra in Tab
169. e the Ethernet ports are located just above the PC in a silver strip mounted on the  wall  The TCS RS 232 ports are two 25 pin D sub connectors in a breakout box mounted on the  wall  The chopper control box is usually placed on the shelf above the Sun workstation  MIRAC  printing is done by transferring Postscript files via Ethernet to the observatory Postscript printer   At the IRTF  the MIRAC system should be located on a long table placed against the telescope  computer room wall facing east  The telescope and focal plane monitors  mount paddle  focus  paddle  and intercom microphone should be on this table  along with adequate space for observing  log books and notes     The PC Computer connector positions are given in and Figure A14 4                                                       MONITOR 9  SEES O    A D DIGITAL  1 0    POWER SUPPLY  2252      A             KEYBOARD    20 Inches                                                       Figure   14 3 MIRAC Control Room Layout    5 22 99   14  Hardware Preparation and Setup 185                                                  lt  8 375  gt       uc ON OFF SWITCH            PWOER  KEYBOARD    C MOUSE           FILTER   PRINTER  COM   TELESCOPE   18 25  DATA COMMANDFIBERS         n oa    mee   cHoPPER BNC  C ETHERNET      AJD DIGITAL vo                 Figure 414 4 MIRAC PC Connector Positions      14 5 Camera Installation at Telescope    Tools and screws for mounting the guider box are in the  Guider Box Assembly  plas
170. e transferred via the Ethernet to the telescope computer  At the SO 2 3 m  the source files should  be placed on a 1 44 MB 3 5 inch PC floppy  The MIRAC program uses the source lists to  automatically load the R A  and Dec  of an object into the header  This is done in the  OBS  Header Source Information menu using List of Sources and Find Source commands     For the observing run  all of the sources of interest should be entered  along with 2 or 3 SAO catalog  stars as close as possible to these objects  The OBSLIST program can be used to locate the nearest  SAO stars to the sources  The SAO stars should also be fairly bright  mag 7 0 or less  to be easily  located  Occasionally there is a problem with an SAO star  wrong coordinate  proper motion  etc    50 it is a good idea to have three or more  Also         can offset between SAO stars to test pointing  and offsetting near the source  IR calibration standards should be entered in the same list  at  coordinates throughout the sky  so that at least one will be observable at all times     AIRMASS uses   CAT files to create tables that show airmass versus time of night of the sources  for the date of interest     4 2 Offset and Command Files    Command and offset files should be prepared in advance  These are described in Sections 7 5  and 7 6     20 MIRAC User s Manual    4 3 Establishing an Individual Guest Account    At the IRTF  guest accounts may be established 3 days before the start of an observing run and expire  3 da
171. eam     Setup  Each Night        25 hr Recheck IR focus     Observation Sequence        15    Record pictures of a calibration star at wavelength of next source observation   Typically 12 5 second on source integrations in chop nod mode with a sequence of 12    50 MIRAC User s Manual    offsets or paired with a sequence of 6 offsets  If extinction data is desired  this should  be done at other wavelengths for the nights observing as well with resulting additional  time    1 hr Record pictures of object at selected wavelength  Typically 24 20 second on source  integrations in chop nod mode grouped in sets of 12 paired in a sequence of 6 offsets  The  telescope drift is checked between each set     15 hr Repeat calibration star     Gain Map Determination        25 hr Record pictures in grab mode of the sky at 1 and 2 airmass at each wavelength of the  nights observations  This is typically 10 5 second integrations for each wavelength at  1 airmass and the same for 2 airmass    7 13 Calculating Image Scale    The image scale can be determined from standard star images such as obtained by the method given  in Section 7 9  Load the images with   DISP  Load Mode Operation   Load Directory filename  lt enter gt   lt enter gt    Determine the column and row fit positions from the image display statistics  Select the desired  quadrant with   DISP  Init Stat and Fit Region for Stats  For the quadrants with the negative source image  invert the image with   UTIL  Arith Multiply  lt ente
172. ectly from the sky board   so it must be properly sorted and put into the MIRAC file format     To run the utility  the input files and output directory must be specified       fast data file names         the same format as the normal data files  except they begin with a  P  for packed instead of the usual   C   Each file within the packed file has its own unique file number  so when the images are written  to individual files  they are given the file name with their number in the usual naming convention  The  output files are all given a copy of the header of the original packed file  with a sequence number to  indicate their position within the packed file     5 22 99 12  Utilities 97    12 8 Rebuild Log File    This function provides a means for creating a log file from a set of observations     12 9 Arrange data into lines or image   This switches between the array image format of 128 x 128 pixels and the array readout format  for  which each array readout channel of 1024 pixels is displayed as eight columns    12 10 Exchange columns to fix image    This is a feature to correct a column exchange problem in the data from August 1994     12 11 Standard Deviation calculation    This utility calculates a standard deviation value for each pixel from a number of separate  observations  This is useful in identifying high noise or other bad pixels  The most common data  input would be chop  chop nod  or nod only data  One can select to use only the off source chop in  a chop nod
173. elow the camera electronics     9  Disconnect the Power connector at the electronics panel  This should be the last cable  disconnected  Put the green male ELCO connector on the cable end connector to protect the pins     10  Open the gray foam cable end protector and carefully insert the power connector  RS232  connector  MS Temperature Monitor connector  and end of AC cord and re close the protector with  the velcro strip     28 MIRAC User s Manual    11  Detach the cable bundle from the three velcro straps at the top of the electronics  Secure the  cable bundle end together with a beige velco strap  Remove the cable bundle from the MIM  If  MIRAC is to be left setup at the telescope  relocate the cables onto the yoke using the velcro straps  or blue string  Make sure that any unused velcro straps are returned to the MIRAC setup in the  control room     12  If the on axis camera has been used  disconnect the power and video connectors from the  camera     13  Return the screwdriver to the Camera Assembly box  Return the box of string  Filter Controller  Power cable  Digital cable  and extra velcro straps to MIRAC table in the control room     Removal of Electronics Box and Cryostat  14  With an allen wrench  remove the two socket head screws in the brass bracket at the top of the  camera electronics  Reaching in from the bottom of the electronics  loosen the two captive knurled  knob screws at the base of the electronics  Lift the electronics off the cryostat bracket and pl
174. em programer  Tony Denault   denault   galileo ifa hawaii edu  extend this  account to the full MIRAC run plus a few days  It is necessary to edit the IRTFDRIV BAT  file in c  nfs for the user name and password before executing NETIRTF The MIRAC PC  should mount   herschel scrs1 mirac as the 1  drive  A second directory can be established  as the j  drive  The backup drives should then be i  or j   These        be accessed from any  IRTF computer as  scrs1 mirac  If it is necessary to change other network parameters  the  files c  nfs irtfnet bat and irtfdriv bat should be edited  keeping the old lines sit  rem  at the  start of the line  and then reboot with  netirtf  from the DOS prompt            network numbers for MIRAC are     miracpc 128 171 165 60   gateway  128 171 165 62   DNS  128 171 165 1 128 171 1 1     Subnet mask  255 255 255 0   NIS Server  128 171 165 1     disks    herschel  scrs 1 mirac   aux1 home mirac  printer irtfpr  At UKIRT     on kiki  export ukirtdata mirac data    At the Steward Observatory MIRAC lab    Set the MIRAC PC date and time     When the PC is turned on or booted  its clock is automatically set from the network to local time  in the MIRAC lab and to UT at each observatory  The time is automatically reset from the  network each time MIRAC is run  The time can be reset manually at any time  For the PCNFS  network software  Steward Observatory and IRTF  execute the batch file TIMES  or RDATE    host    where host is the name of the observato
175. emperature Sensor Calibration       Temp Resistance Resistance Resistance Resistance   Kelvin   Kohms      Kohms   Kohms  1  Kohms     3 9   8 7325 ELA 22 19   34   13 9    35 13 7              ren    ES  ren  Hn     1    12 65              i       ES    dE            TDI       ds                  Oo  D          5 22 99   17  Cryostat Inputs and Outputs    Table A17 7 Clock Inputs             5 24 Dig V J2 20 64 VDDR 9 9 9 4    Notes  Clock rise and fall times should not exceed 10 nsec     Table A17 8 Filter Wheel Switches             Wheel 2        1 Sw A Common    Home  2 Sw B N C       2 9    220 MIRAC User s Manual    Table A17 9 Temperature Control    Cryo In line Name Wire Circuit  Conn Ohms Ohms       Temp A LHe Diode   return        Temp B LHe Diode   sense E Diode    Temp C LHe Diode   sense   68  Temp D He Diode   current 33 6  Temp E 2 Diode   current  Temp F LN2 Diode   sense E Diode  Temp G LN2 Diode   sense   74  Temp H LN2 Diode   return                 1 2 Heater    Temp L 1 1 Heater Gnd          HE           Ds                                  ES   Et    N                                HH             cen    Table A17 10 Preamp Offsets    Voltage Input Shift Digital Shift    Low Offset    8 26  4 13   13530            Medium Offset  7 16  3 58 11730  High Offset  5 51  2 75 9020         Variable offset 2 61 92   3 46 11330    Table A17 11 Digital and Signal Ground Shorting Connectors    Digital Shorting Connector    Bias reference  Dewar shield  case         
176. er at the camera should be remote off  ground off  The filter  controller power is turned on by the PC only for the duration of a filter command sequence  during  which time a red LED light is on at the filter controller  As each individual motor is powered prior  to moving  a small  click  can be heard and the motor holding detent becomes very strong     Filter settings can be made from the OBS  Next Wavelength menu or from the OBS  Header Filters  menu  After confirmation that a filter change is wanted  the command is sent to the filter wheel  controller  The computer will pause momentarily until the command is carried out  Note that this  menu is different from others      the program in that you cannot cancel changes by hitting the Alt F1  key  Once a wheel has been moved  it must be commanded back if one desires to restore it to its  original position     To move to a position on the CVF  the BaF  blocker must be used in filter wheel 2  This is done  automatically in the Next menu     9 9 Observing Modes and Options    68 MIRAC User s Manual    The MIRAC program is flexible in the different ways it can take data  Appendix 1 contains     discussion of mid infrared observing  The high background of the sky and telescope must be  removed by taking reference frames along with images including the source  This is done by various  combinations of chopper motion and nodding the telescope     9 9 1 Source Frames and Off source Beam Switch Options    The observing mode is selecte
177. erature setting for servo control of the  detector stage temperature     The normal settings are Remote  Auto     194 MIRAC User s Manual    There is also a temperature sensing resistor on the detector chip carrier which is accessible at two  tinned wires inside the electronics enclosure  The temperature resistance values are given in  Table A17 6     A14 8 Setting the LN  Shield shutter  Pupil Stop  and Magnification    The LN  shutter  pupil stop  and magnification must be manually set at the cryostat  The settings  for the latter two should be entered into the header  These parameters are entered in  OBS  Header Filters and Optics  The LN  actuator is located just below the cryostat window  It  is engaged by inserting the actuator  rotating it to find the slot on the mating piece  inserting it into  the slot  and rotating it to capture the pin  The shutter can then be withdrawn until it stops and  the actuator rotated to disengage the pin and fully withdrawn     The pupil stop has six positions as given in Table A14 4  The pupil actuator is the one furthest  from the vacuum valve  The actuator must be inserted and rotated until the pin engages a slot  At  that point there should be no space between the knurled knob and the bottom plate of the cryostat   The only way to be certain of the pupil setting 15 to run the camera in grab or scope mode and  rotate the actuator fully clockwise  looking up towards bottom of the dewar  to the blank  position  confirming this with the b
178. es the pixels at the present and subsequent  positions of the cursor to be set   C  to be cleared  and  M  to be unaffected   Move     E  exits  the mask editor     Pixels can also be masked if they are above or below a user specified threshold value for an image  which has been loaded through  current    operation   or  replay   This is useful if high dark current  or unresponsive pixels are to be masked  The mask should have been turned off in DISP  Load Auto  before loading the image  The mask should be cleared in  MaskEdit  Then the threshold criteria can  be used to eliminate pixels  It is helpful to first display the array data as a histogram to determine    what the lower and upper thresholds should be used   A reasonable sequence creating a mask follows  It is generally satisfactory to just use the first step     1  Mask high pixels  Using a blanked image  grab  at a standard frame time  displayed with mask   gain  and flat off  clear mask and cutoff the high dark current pixels  the 10 16 highest      2  Mask low pixels  Using the difference between a flat image at a moderately high flux level  grab  or off source frame of a chop nod observation  and a blanked  or low flux flat image  with mask on   using the mask created in step 1   disregard low  pixels  those less than  6 of the median   This will  mask vignetted  as well as  unresponsive detector pixels     3  Mask high noise pixels  Using UTIL  Function Calculate STD Dev image and a series of off   source chop n
179. ffsets  The main display can  then be made to match the TV guider and show the observer the orientation of the array  However   the data is always stored in the disk files in the same way  and displayed in the following display  modes in the same way  So for example if the Y flip mode is on  the default display will be upside  down compared to the Contour mode described below in Section 11 2 2  Any data in the image  display buffer can be manually flipped using the UTIL  ARITH flip options to give the image the  proper orientation  Of course  then it would appear properly in Contour and flipped in the main  display screen     84 MIRAC User   s Manual    11 2 1 Grayscale  This mode displays a full screen grayscale image of the full image display buffer  This allows images    larger than the 128x128 array to be displayed  The screen pixel size is adjusted to make the image  as large as possible without overflowing the screen  This mode is shown in Figure 11 1     Options  Setup Redraw PETH Exit    128  112              64  48  32    16        lt 64 64    16 32 48 64      96 112    71 1364  MIRAC2 U of Arizona Smithsonian Ast Obs  OBS  4 05 96 15 08 21 c960405a 001 SIMULATED STAR IDLE 0 00 0 02 0 50  DISP  4 05 96 15 05 40 81 Data not saved SIMULATED STAR Mode  Current    Figure 11 1 Grayscale Display Mode     The parameters which control how the grayscale plot is displayed can be changed using the Setup  command once the plot has been displayed  They may also be changed before 
180. filename     2 4  Print File   Type   Ipr filename            inquire printer status    enscript  G filename  page w header    2 5  List Files and Directories  Type    Is for listing of current directory  ls   a list all files    Is 1 list all details   15 directory name for listing of another directory  Is filename for listing of a single file   15  t or    ls   t filename or    ls   tdirectory name to get a listing reverse sorted by  time of last modification    ls   F or   ls   F directory name to get a listing that marks  directory names by apending a   character to   them    2 6  Move  or Rename  Files and Directories  Type   mv source filename distination filename to rename a file    mv source filename destination directory to move a file  into another directory    mv source directory name destination directory name to  rename a directory  or move it into another   directory    2 7           Files                    source filename destination filename to copy a file  into another filename    cp source filename destination directory to copy a file  into another directory     2 8  Remove  or Delete  File  Type    rm filename to remove a file  rmdir directory name to remove an empty directory    rm r directory name toremovea directory and its  contents     2 9  Change Working Directory  Type  cd to change directories to your home directory    cd directory name to change directories to another  directory     2 10  Find Name of Current Directory  Type pwd     2 11  Pathname
181. g order     Read in specified file   Add sources  if selected    Delete sources  if selected    Sort sources  if selected    Output file  if sources have been altered by above   Output telescope file   Print listing    The format for the Steward Observatory telescopes catalog file is as follows with no space between  items     record number nnnn   visual magnitude 100 mmmm   RA in radian I rrrfrrrfrr  Dec in radian                             RA      arcsec 100000 yrs              Dec      arcsec 10000 yrs                      Label Field  text 64 chars  Epoch  1950 assumed  eeee ee    CR    LF   ec    The format for the IRTF catalog file is     name RA DEC RAProperMotion DecProperMotion Epoch  where          name up to 40 characters       spaces   this  program fills spaces with        RA hh mm ss ss   DEC dd mm ss s   RA PM a aaa  Seconds Year    DEC PM a aaa  arcsec Year    Epoch yyyy y    The format for the UKIRT catalog file is     No  of lines object Object name RA DEC Epoch  Column numbers are important     12345678901234567890123456789012345678901234567890123456789       LKHA1 98 00 08 47 000 2458 33 06 01  B1950 0       NGC1068 02 40 07 201  00 13 30 00       B1950 0    122 MIRAC User s Manual    The files for the SAO star search  switch  f  are ssao 00 ssao 42  provided by picoscience for use  with their Superstar program  When the  f option is used  the program searches through the proper  ra ordered file for objects within a certain radius of the target  If the ra
182. gt  imlist   l   peakl eval imlist 30   utput peak coordinate file is  pk200   1    On  22     304   rame 4200  Center cursor on peak  press spacebar   1   0   22   30    rame  201  Center cursor on peak  press spacebar   12 Ox  22   30    l gt  xlist pk200 pkx200    gt   xcor   921210a 212  p pkx200      sr  sw     atauoffs       ross correlation program   xcor c         ow reading reference imag    ile   921210a 212 header read  parameters  130 84  ow scaling reference imag  4 130 84  eference peak found  307639 at 63 31  ile   921210a 200 header read  parameters  130 84  ow rescaling search image      4 130 84  Peak used is  374406  at 77  79   Window corner at 67 65  Results  ZLS  46 0 98957 0 37879 0 67805    32             32       ile   921210   201 header read  parameters  130 84  ow rescaling search image      4 130 84  Peak used is  377523  at 81  67   Window corner at 71 57  Results   20  36 0 99232 0 36268 0 68268    32       1 gt  type pk200  921210a 200 76 481 77 969 101  040  921210a 201 81 530 67 871 101  040    l   type atauoffs  921210a 200 78 77 130 84  15  46 0 98957 0 37879 0 67805  921210a 201 83 67 130 84  20  36 0 99232 0 36268 0 68268    1 gt  makelist atauoffs atauoff2  1 gt  type atauoff2   921210a 200 78 77 130 84  921210a 201 83 67 130 84       139    225    226    227   28     29  23 0            32     533   34    140 MIRAC User s Manual    cl   lcoadproc atauoff2 ataull7 35    Warning  Cannot access image    tempbigl   Warning  Cannot access im
183. gure   14 5 MIRAC Camera Mounted on Telescope                               186  Figure Al4 6 Camera Electronics Connector Positions                               187  Figure   14 7 IRTF Cable Routing at the telescope                                  189  Figure   14 8 IRTF Cable Routing to Control Room                                 190  Figure   16 1        MIRAC Main Screen showing Array Test Pattern                     206  Figure   16 2 The MIRAC Main Screen with the detector at room temperature            207  Figure   16 3 Boeing HF 16 SrAs array unit cell                                    208  Figure   16 4 HF 16 multiplexer                                                           209  Figure   16 5 HF 16 clock timing                                            1  209  Figure   16 6 Array timing with reset control for burst mode                           210  Figure   16 7  Signal processor pixel timing                                         211    Figure   16 8  Array read timing with chopping                                     211    Vili MIRAC User   s Manual    List of Tables  Table 2 1 Magnification and Pixel Sizes                                            6  Table 2 2 lt  MUR AC Millets  ste 184 dash es              deta ee eed ee dat auton 7  Table 2 3     16 Array and MIRAC System Properties at 11 7 um                        8  Table 2 4 MIRAC3 Background  Sensitivity  and Noise  IRTF 3 m Telescope              10  Table 2 5    Telescope and Sky Emissivit
184. h makes it easy to enter the  offsets for each integration  Make sure that the directions symbol  which indicate N  S  E  W  is  pointed in the proper direction  according to the orientation of the array on the screen  This  indicates to the program the proper orientation of the data array on the sky  The orientation can  be checked by taking an image of the standard star  noting its position  and then moving the  telescope by several arcsec in a known direction  and then take another integration to see the new  position of the star on the IR array  The normal settings for the SO 2 3 m telescope are X and Y  flips on  N up and E to the left  In MIRAC  the offsets are entered in arcsec of angle or in pixels  in both RA and Dec and converted into seconds of time for the telescope commanded offset  In  the OBS  Telesc Telescope control Position Commands menu  the RA offset is entered in seconds  oftime  The telescope console display offsets are relative to the current position in seconds of  time     Note that the X and Y flip options only control how the data is displayed in the main image  display screen  The way the data 15 stored in disk files is unchanged  Therefore the same gain   mask  and flat fields may be used for flipped and unflipped images  If flips are used  the data will  still be unflipped when displaying using the functions under DISP  Begin  This display can be  flipped with UTIL  Arith X Flip and  Y Flip  The flip settings do have an effect on the  UTIL  Funct
185. hat should be used  even at very low flux levels     Out of range high is a count of all pixels  excluding masked ones  for which the value is greater than  the fixed linear maximum or greater than the A D maximum minus 50  Out of range low is a count  of all pixels  excluding masked ones  for which the value is less than the A D minimum plus 50 or less  than the zero flux value minus 50     The ratio of the measured background noise to the calculated BLIP noise for the given background  is given as BLIP  This number should be 1 0 to 1 2 when using the broadband filters  When there  is a bright source in the field or high sky noise or when using the 2 2 and 3 8 um filters  this number  will be larger  The blip noise calculation is                  totalnumber on source frames     g     MEC      x  skyflux   blank flux  x BG  blip    a 1 grab   a  2 chop or nod   a 4 chop and nod   BG   electron gain times dispersion at the detector  g   electrons unit    64 MIRAC User s Manual    The status lines give the date  time  filename  and object for the current observation and for the  displayed image  The observation time is updated every second  At the right on the current line is  the observing status  Idle  Data  Save   the remaining time out of total time for the current  Observation  and the remaining number of observations out of a total number of observations per run   To the right of the display line is the display mode  Current  Operation   Mosaic  Replay  etc      The loca
186. he FlipFlopChop mode  where the final image displayed is either the first or second image of the  last chop pair  With this mode  when taking successive observations  the program alternates the  display between the chop beams  A similar FlipFlop mode is available in the  DISP  Load Mode Replay function to examine past data    9 10 Telescope Control    The telescope chopper is controlled by the camera electronics via the optical link to the PC  This  outputs a 0 V or 5 V level to move the chopper between beams  The output id on s BNC cable  hanging out of the back of the PC  This should be connected to the chopper  EXT  input on the back  of the chopper control box at the SO 2 3 m  or the  blue box  at the IRTF  which converts the logic  chop signal to a bipolar signal that can drive the chopper     9 10 1 Nod Control by Logic Level    The program can output a level indicating the current nod beam  0 V for beam 1 and 5 V for beam  2  Another possibility is to output a pulse to signal the start of the beam switch  The pulse can be  positive going  0 to 5 to 0 V  or negative going  5 to 0 to 5 V   The output for the pulse and level  control is on the A D board breakout box  on the BNC marked  NOD   This must go to the Wobble  control box  which accepts a level or pulse input  and outputs the proper Mount Micro command to  the telescope  For the Steward telescopes  the level control mode has been used successfully with  MIRAC on the 1 5 and 2 3 m telescopes     9 10 2 RS 232 Cont
187. he camera is continuously read out and all images saved  The speed is limited by the  bandwidth of the ISA bus that the DSP card uses to communicate with the PC  The data are saved  temporarily to a RAM disk  and are automatically moved to the Data File and Backup Data    72 MIRAC User   s Manual    directories at the end of the observation  The number of images is limited by the size of the RAM  disk and the maximum allowable DOS file size  The present RAM disk is 32 Mbytes  The packed  files are 32768  2 N 4  bytes in length  where N is the number of images  For chopped data  the  number of images is twice the  How many     value selected  For example  for chop mode at 40 Hz  there will be 80 chop half cycles per second and 2400 images in 30 seconds for a file size of 19 7  Mbytes  The data can be taken in Grab or Chop mode  no Nods allowed   Also  SaveAllObs must  be ON and Ultrafast cannot be run in Simulate mode  The final image of the set can be displayed to  the screen     The data are saved as 16 bit integers in unreordered format  The individual images are single  coimages  no coadding is done on the DSP board  so 16 bits are sufficient  The MIRAC unpacking  routine  UTIL  Functi Unpack Fast Data Files  reorders the data and saves the images in the normal  mirac format  The mrc2fts program unpacks and reorders the pixels and saves the images as fits files     The displayed  last  image can use the usual mask  flat field  and gain functions  An additional option  is t
188. he crate first  must be threaded through a wall opening into the control room  with enough slack to conveniently reach the power supply and PC  At the S O 2 3 m telescope  it  is routed from the east side of the pier  where the excess is left on the floor  around the yoke  and  hung from a cable tray leading into a small electronics room and thence through an opening onto  the counter in the control room  At the IRTF  the cable is threaded under the wall into the  computer room under the false floor  and thence to an opening in the floor at the table where the  PC is setup  At UKIRT  the cable is threaded though a hole in the wall directly into the control  room     Normally a telescope facility dual fiber optic cable running from the Cass focus to the control  room is used  If this is not available  such as at UKIRT  and it is necessary to use the MIRAC  fiber optic cable  a moderate length is shipped in Crate 5 separate from the rest of the cable  bundle  The fiber cable ends are covered with red or black plastic protectors and small black tips     In the telescope chamber  as much as is possible  the cable should be strung while it is being  removed from the crate to keep it off the floor  The cable should be supported by the MIRAC  Velcro straps with buckles  At all cable support points  if the MIRAC fiber optic cable is  used  care should be taken not to squeeze it with the support strap to avoid damaging the  fibers  At the S O 2 3 m telescope  the cable is routed from 
189. he dichroic dial readings    Step 3  It is sometimes useful to confirm the alignment by viewing the out of focus image  of a bright star at 2 2 um  This should produce a uniformly illuminated  symmetrical  doughnut with a dark central obscuration  This is not sufficiently sensitive and  unambiguous for the actual alignment     A14 12 Setting the Telescope Chopper Parameters    For an extended source  the chopper throw should be set large enough to chop completely off the  source  or off the array field  30 to 50 arcsec   For a compact source  the chopper can be set for    5 22 99   14  Hardware Preparation and Setup 199    both beams on the array with a throw a little less than 1 2 the field  The chopper direction should  be chosen for best imaging at each telescope     On the IRTF  the chopper direction and throw can be set from the control room  The preferred  direction is North South  The chopper reference BNC connector must go from the MIRAC PC to  the IRTF blue level shifting box  thence to the chopper sync input  The chopper should be set to  square wave  external reference     On UKIRT  the chopper direction and throw can be set from the control room  The best direction  is North South     On the S O  2 3 m  the direction is determined by orientation when the secondary assembly is  mounted  The best orientation is in declination  The throw is determined by the position of two  rotating cam plates which form the mirror motion stops  These should be cautiously rotated us
190. he distance from  the power connector to the left most Velcro tie should be 54 inches  In the upper fight figure  the  loop should drop to 41 inches above the floor     190 MIRAC User   s Manual       Figure A14 8 IRTF Cable Routing to Control Room     Note that in the top figure  the cable loop from the telescope yoke is incorrectly hung  up on the corner of the MIM     5 22 99   14  Hardware Preparation and Setup 191    Cable Connections      Control Room       Power strip to clean power   Power cord from Camera Power Supply to clean power   Power cords for PC  and laser printer  lab only  to power strip   Power cord from computer monitor to power strip   Computer monitor to monitor connector on back of PC   Computer keyboard to keyboard connector on back of PC   Ethernet cable from Ethernet to Ethernet connector on back of PC   50 wire ribbon cable from A D Digital I O Interface to A D connector at back of PC   RS 232 9 pin cable from telescope control input connector to telescope control  COM2  RS232  connector on back of PC  Steward Obs telescopes only      For logic level telescope nod control  bit 0 of A D Digital I O Interface to telescope nod level  input    Chop BNC cable from telescope chopper external reference input to BNC cable at back of PC   Parallel cable from input of laser printer to printer connector on back of PC  lab only     Cable Bundle Control Room End       The captive beige velrco straps on the cable bundle should be opened to separate the cables ne
191. he filter wheels  remove the    bridge bracket    which holds the wheels in place   The first wheel accessed is wheel 2  the middle wheel is wheel 3  and the wheel closest to the  optics mounting plate is wheel 1     Wheels 2 and three can be removed from the shaft  The micro switches must be depressed  to avoid damaging them with the gear teeth  Take extreme care not to lose any of the  sapphire spheres that form the axial bearing and heat sinking  Also pay careful attention to  the placement of radial bearings  washers  and springs  When reassembling make sure all  surfaces are clear     Wheel   is removed in the opposite direction from the shaft  It is necessary to loosen the set  screw at the optical baffle to free the shaft  When reassembling  the set screw should be  tightened while pressing on the black hub to compress the axial loading spring     When removing filters from the wheels  take extreme care that screw driver does not slip and  scratch filters  There is a cardboard protector in the MIRAC Working Files Cryostat  Assembly folder which should be used  Use filter disassembly box placing the filters and  spacer washers carefully in the correct compartment on small Kim wipes so surfaces do not  contact     A19 5 Removing the upper section of LN2 radiation shield     1      2     Unscrew LN2 shield temperature sensor and lift tape holding the wire to the radiation shield   Take care not to damage the aluminum foil on the radiation shield     Remove the slotted ven
192. he macro F3  Findstar   It is not necessary to nod at 2 2  um     Focus  IRTF nominal value for MIRAC is in Table 7 3  Focus procedures are described in  Sections 7 8 and 7 9     Check chop and nod throw  Choose whether to put object in all four chop nod beams  Chop  20 arcsec N S  Nod 20 arcsec E W  center source in one quadrant  or chop and nod completely  off the array field  Chop 50 arcsec N S  Nod 1 60 arcsec E W      Find initial standard star and begin observing sequence  To find object  first acquire nearby  visible catalog star at 2 2 um     Observing sequence  First Wavelength   Standard star   Object Standard star   Second  Wavelength   Standard star     The total cycle should take at most one hour     Image scale  Observe a standard star with chop and nod throws set for the source in one beam  and offset file  standard off  with star initially centered at center of array  See Section 7 13 for    determining the image scale from these images     Gain Map  flat field  determination  Set the following parameters     OBS  Next Chop Nod Grab  Integration Time 2 sec  How Many 10  Frame Time  for dome flux in linear region   OBS  Header Observe Chop Frequency Low  for frames coimage   total frames     Y        Level Med for dome  low for sky    For each observing filter  with frame time set appropriately  obtain a set of images on the dome   preferably away from the shutter  with the shutter closed  and a set of images of the sky at the same  declination and hour angle a
193. he next six reads  a 6 5  msec chop wait   the array  is reset but the coadder  output is not used  A  minimum of one chop wait  read is required to prevent a  pixel integration from being  partially in each of two chop  positions  For the next eight  reads  the array is not reset so  the charge integrates on the  integrating capacitor  At the  following read  the array is  reset and the coadder output  written to the coadder  memory  The process repeats  for a total of four frames  coadded for one chop half   cycle when       coadder  output is again written to the  FIFO memory         data   ready signal informs the PC  computer that a co image is  ready and the image is read  successively from each of the                                                                                                                                                                                                                                                                                                                                                                                                                                 16  Checking and Trouble Shooting 211   lt  16 Cycles  1 0667 usec  BIT CLOCK                                                                                FAST CLOCK                                                                                       ANALOG SIGNAL              CONVERT PULSE           HOLD  amp  CONVERT PL AM       COADDER ADDRESS               
194. he storage dewar   The transfer tube  should first be cooled down by slowly inserting it into the storage dewar  with the pressure relief  and vent valves closed   Then the transfer tube can be raised and inserted into the MIRAC inner  chamber  The warm transfer tube inserted into the supply dewar usually raises the pressure    182 MIRAC User s Manual    sufficiently to transfer  If not  a rubber bladder can be used to alternately warm some helium gas  from the dewar and squeeze the warm gas back into the dewar to induce boil off and raise the  pressure  With the MIRAC transfer line and a storage dewar pressure of  2 psi  it takes about 15  minutes to cool down the cryostat chamber to the point where the LHe starts to collect and  another 15 minutes to fill the chamber  This is for a low transfer rate to conserve LHe during the  cooldown  The LHe consumption is about 8 liters  At the IRTF and UKIRT  the transfer line  requires a pressure of 2 to 5 psi  The first fill will boil off in about 5 hours  The detector will  reach 4 3        about 1 5 hours     summary of the LHe cooldown is given in Figure   14 2  After  completing the LHe fill  the LN   outer  chamber should be topped off  At this time the threaded  fitting with the long tube should be installed on the LN2 vent and the safety fitting with the release  valve and Bunsen tube installed on the LHe vent  The LHe safety cap should be on the LHe  vent at all times except during transfer to prevent air entering the LHe fil
195. hop  Nod off  Number 1000  Obs  Header Observing Parameters  Read time 2 2 msec  Frame time 75 msec  Chop delay 15 4 ms  Chop frequency 3 hz  Integration time  5 or 1 sec  Obs  Header Filters  2 2      open  Obs  Save off  Disp  Init  Statistics on  Fit Gaussian  Autorange Min max  Min  2  Max 5    Disp  Begin Gray Gray         Y on    Step 1  Set the telescope focus and the location of the guider box TV relay lens to the values  recorded in the log for the last observing run  Also note any information on misalignment of the  finder telescopes     Step 2  Point to the brightest star available  This should be visible  perhaps way out of focus  in the  on axis TV and MIRAC  If it is not immediately available  try a 9 position search around the initial  MIRAC field  If this is not successful  on the IRTF and S O  2 3 m telescopes try Step 3     Step 3   Star not found with initial effort   Remove the cover plate above the relay optics assembly  on the guider box  Flip the viewing mirror  lever on the right side of the guider box   You should  see the telescope secondary brightly and uniformly illuminated as a doughnut  Guide the telescope  to achieve this with your eye at the center of the guider box opening  You can also use a jeweler s  loop as an eyepiece to try to locate the stellar image  It should be an inch or two outside the guider  box  Change the telescope focus to put it there  Reposition the flip mirror to the normal position and  try to find and focus the star with 
196. hopping is in one direction  Dec  and nodding  in another  RA      The sequence is as follows  First  with the telescope pointed so that the source is in one of the chop  beams  the chopper is run and the camera coadds frames into the two separate buffers for the time  interval given by the integration time  One buffer contains the source plus background  the other  contains only background  Next  the telescope is nodded to a different sky position  and two more  background images are obtained and stored in two additional buffers  These four images constitute  a single  observation   After the observation is complete  the telescope is returned to its original  position and the four images individually stored in the observation file and combined to provide a  realtime image with background subtracted     It is also important to offset  or dither  the images  This is for the following reasons  1  Moving the  source around minimizes any array dependent effects  such as bad  unresponsive  high dark current   or noisy  pixels or errors in the gain map  It insures that these do not compromise any one area of  the image  2  Offsetting by fraction of a pixel increments improves the resolution of the final image   since the observations can be registered to the nearest fraction of a pixel before combining  3  For  some extended sources such as planetary nebulae  the entire source may not fit completely on the              so a number of positions must be taken simply to observe the en
197. i Fits Output utility as described in Section 12 5     202 MIRAC User   s Manual    5 22 99 A 15 MIRAC Cryogen      Instructions 203    Appendix 15  MIRAC Cryogen Fill Instructions at Telescope    MIRAC3 LN2 and LHe must be topped off once per day  preferably at the end of the night   normally by the telescope operator  The hold times are LHe  gt 40 hrs quiescent and  gt 30 hrs  operating  LN2  gt 34 hrs  The following instructions were developed for the IRTF     l     Close the LN2 shutter by pushing the actuator nearest the window all the way in  up  and then  retracting it fully   This is an end of observing night task  The shutter must be reopened at the  start of the night by inserting the actuator into the slot  rotating to capture the fitting  and  withdrawing     Remove MIRAC from the Telescope     a   b          d   e     f     a   b            d     Position the yellow scissors cart under the camera  oriented N S with the handle toward  the North  Place the MIRAC foanyplastic sled crosswise under the camera with the thin  end under the cryostat    Raise the cart to almost contact the camera    Loosen the socket head screws on either side of the camera mounting plate and withdraw  as far as possible    Raise the cart and camera sufficiently to release the mounting ball from its cradle    Slide the sled and camera West to clear the ball from the cradle  Lower the cart surface to  about 30 inches from the floor    Move the cart N W to clear the telescope sufficiently f
198. image  The detector temperature is updated every second  the other temperatures every five seconds   and all other parameters when they are changed or when RUN or CAMERA INIT are executed  The  only exception to the current parameter display is in the Display Replay Mode  for which the  parameters contained in the file headers for the displayed images are shown     REPLAY Mode  E Exit  C Continue File Header displayed below    Obs  Mode   Chop Nod Log Sav                             10 00  Chop   Hz gt       AMBT emp  4 37 Off  Dec  10 00  FrTimetCms     EleTemp  19 31 Filtr 1  CUF  Burst Mode  A DTemp  47 23 Filtr 2  BaF2  IntTimets      DetTemp  6 125 Wavelth  12 80       Section Full         Data gt  Max  12 82  lt  91 103              3 63  lt  30 123   Fit   Max  13 13    91 34 102 835 FWHM  3 53 Chisa  0 004  Total RMS   0 40579 Avg   0 0364 Num  16384  Background RMS  0 30556 Avg     0 0510 Num  16035   Sum  239 0 Num  349  lt         Flux  2110 8 RMS   21 83 DIF  0 7     A D  lt  5415  1320  FrameErrors      Flux MaxMin  lt  4085  1517 gt  BLIP  1 36 Lev  Medium OutOfRange    18  o gt   13 51 59   DISP  9 12 97 8  20 04 97 g  d970912 c970912a 115 gamma adl Mode  Replay       Figure 9 1        MIRAC Main Screen  OBS Command Line     The array data is displayed as a grayscale or false color image  Whether current or past data  the raw  images        be processed by adding or subtracting chop and nod images and applying a mask  flat  field  and gain map as desired  The c
199. ince this is the most satisfactory way to characterize the camera     The point source sensitivity depends as well on the image spread due to telescope image quality   chopper image degradation  and atmospheric seeing and diffraction  Evaluating the point source  sensitivity requires determining the equivalent number of pixels for background noise due to the point  source image spread  This is discussed by King for pixels small compared with the point spread  diameter  PASP  95  162  1983   He gives the equivalent noise solid angle to be C 0   where 0 is the  FWHM for the image  The constant  C  is 2 7 for an Airy disk and 11 for a seeing mode  The point  source sensitivity can be calculated as the surface brightness sensitivity times Sqrt C 0       We use a simplified point source sensitivity calculation  The point source noise is determined from  the surface brightness noise by assuming 1 2 the signal appears in a disk of the root sum square of  the diffraction FWHM and seeing FWHM  taken to be  5 arcsec at the IRTF      10 MIRAC User   s Manual    Table 2 4 MIRAC3 Background  Sensitivity  and Noise  IRTF 3 m Telescope    Backgnd Noise 1 sigma in 1 minute  Wave Diffraction Frame        pixel Surface  length FWHM time  Digital Sensitivity Brightness Point Source   um   arcsec   msec  Units     Jy Unit   mJy arcsec      mJy            2 2 0 16 70 635    035 5 9 5 5 12 6  3 8 0 27 70 1470    029 6 5 6 6 11 4  4 8 0 34 70 2320    057 16 17 9 9  7 9 0 56 50 2710 40 204 270 5 9  
200. inear operation as monitored with an oscilloscope attached the a Signal Processor    test plug     DETS should be adjusted for a DETS current of about 10 14 pA     The              cryostat input output wiring should be checked each time the cryostat is disassembled   The bias voltages should be checked and adjusted before the camera is connected  to insure that the  detector will not be damaged  This can be done by monitoring the voltages at the digital cable  connector or the bias monitor board with the short ribbon cable  With the camera operating  the bias  voltages and currents can be monitored by measuring the voltage and voltage difference of each bias  pair of test pins on the monitor board     215    ostat Inputs and Outputs      17  Cry    5 22 99                               BRIT          puts   Detector Room Temperature       14                                                                                  EEHEEEEEEEEEEEEFREREE                  ESESEELEELLESEEENEEEEEEE                                                              322 3                                                                                              Table A17 2 Bias I       a  _  _  _  En  ii           E       rekke ekee  SDE  EE      H  EIE  mE                        MIRAC User s Manual    216    ty at Room emperaus    T   Detector      Continu             Lb pesas OTT                      d ELR                 BFEEEEEEREPEDEBEBEE       EEEEEEEEEEN  Lipsia TT TTT TTT TTT             
201. ing     5 64 inch allen wrench as a rod  The chopper should be run at 10 hz  internal  with the  Amp   at 1 o clock   Function  dbl  The correct position can be judged by the sound  Then it should be  checked with a star moving from one beam to the other  Return the  Signal Source  to external  for operating the camera     A14 13 Checking the Telescope Collimation    It is a good idea to check and adjust the telescope collimation at the beginning of the run  There  are secondary tilt collimation adjustments with readouts on the IRTF telescope control console   The collimation should be done after the dichroic adjustment  It can be done  by the first method  below  in daylight  There are three possible approaches     1  Centering the beam from the camera and secondary mirror onto the primary  To  achieve this  run the camera in scope mode monitoring columns 1 and 128 at 11 7 um with the  telescope looking at the sky  tracking off  Set the display scale to give good sensitivity  Set the  chopper angle and throw as desired and check it in chop mode  A chop sequence will stop with  the chopper in the on source beam  The telescope should be close to nominal MIRAC focus     a  First Option   adjust collimation for the on source beam  This is appropriate for a  large chopper throw and when the source will be in only one chop beam  Tape strips of  projection transparencies on the monitor as fiducials  Change the RA collimation  At  some point  some of the beam should go off the edge 
202. ing airmasses from observing list   OBSLIST EXE  used for creating and editing an observing list   TMONITOR EXE  stand alone temperature monitor program with data saved in a file   VGADEMO EXE   MIRAC HLP  on line help for MIRAC program    TCSCMD TXT   CATALOG   DIR    various source catalog files    SSAO  DIR    Star catalog files    UNIXPROG lt DIR gt   C programs for unix supporting programs     144 MIRAC User s Manual    Files that should be in the observing directory  e g  O IFTF1294   these files are not all  essential to run the program  but it is helpful to start with previous files in these categories           AMS  airmass listing generated from chosen  CAT file for date and site     CAT  catalog source files for MIRAC and Steward Obs Telescopes      RT  catalog source files for IRTF              catalog source files for             DAT  catalog source files for UKIRT      CMD  command files      GAN  gain maps  such as 781209 GAN      FLT  flat field maps  such as LAB1294 FLT      FRM  filter frame time link files      HDR  header files  such as CURRENT HDR  STANDARD HDR      LOG  log files of the form 12 09 94 LOG  generated during a run   MACRODEF MRC  macro function key assignments      MRM  macro files  such as PRINT MRM      MSK  mask files  such as INHL1209 MSK  image  noise  high  low    SCOPEHDR PRM  header parameters for the scope mode      SPC  plot parameter files  such as MRCLINE SPC      OFF  text offset files     Files that should be in the data file 
203. ing transfer loss  once per day  but not  supply dewar boil off  I am assuming we will consume 5096 more  on Mauna Kea because of less efficient transfers  We will try  to use transfer techniques that minimize the transfer loss     Transfer tube   We will use IRTF flexible transfer tube  Can you give this a good  vacuum pump down before we arrive     Nitrogen gas  Require regulated N2 gas to assist removing LN2 from cryostat   Nov 5  Thu     Control room setup   Nov 4  Wed  prior to MIRAC team arrival  Table along computer room  east  wall   Quiet power strip  less that 1 kw   Thin ethernet with transducer to mate with thick cable  Two monitors for telescope status and guiding video  BNC cable to chopper reference interface box  Dual fiber optic cable from computer room table to Cass at telescope  We are depending on the IRTF fiber cable   Intercom mike  Telescope paddle  Focus control paddle  On axis mirror control button    Instrument Mounting  Require MIRAC interface plate stored at IRTF   Usually mount on south station   Nov 5 or 6  Thu or Fri  mount MIRAC on telescope   MIRAC3 must mount with the window facing East  instead of  North as with MIRAC2  This means that the electronics box  extends west of the cryostat  If there is interference with  other equipment  It might be possible to mount the electronics    5 22 99 3  Observing Run Arrangements 17    on the south or north side of the east facing cryostat  I  will send a sketch by fax     Off axis Guider  We would like
204. ion A19 5 Item 9  use a caliper to make sure that the LN  radiation shield is  centered with the LHE cold work surface before tightening screws     Take care to make sure that all actuators rods and support posts are installed   Inspect  O  ring surfaces  Smooth scratches with  rouge  paper if necessary  On occasion  remove      rings using a Q tip stick cut with scissors to a sharp end  Clear      ring with Kim    wipe and grove with a Q tip  Regrease      ring sparingly     Pumping the cryostat with a vacuum pump should be done according the instructions in Section A    5 22 99   20  VMS  DOS  UNIX Command Reference 227    Appendix 20  VMS  DOS  UNIX Command Reference    A20 1 Command Cross Reference Guide    Description VAX VMS DOS UNIX    Set search path assign path logical path set path         Set terminal type set term inquire N A setenv TERM    Change login password set password N A passwd    Display the date show daytime date date    Display the time show daytime time date    Online help facility help N A man    Online tutorial login to tutor N A learn    Show all active users show users N A who w    Display a file type type cat    Page through a text file type page more more    Change a file   s protections set protection attrib chmod    Copy files copy copy cp    Delete files delete del erase rm    Rename files rename rename mv    Print a file print print Ipr    Search a file for a pattern search find grep    Locate a file dir       find find    Show difference bet
205. isplay   gt   Factor for VGA Bin 1  Grid Display x  Autoramge Settings   gt  p     Fit Function                  None    p           5tatistics and                       Gaussian    Moffat    Stats Display On       Fit Function Gaussian  Object Detection Sigma 3 0  Source inclusion width factor 3 0 p   Region for stats      Limit for BKG Iterations 3  Moffat Beta term 1 000 A  Full Map  Calculate Source model sum Off B  Lower Right  Weight data in fit Off Cy Upper Right  Region for stats Full Map D  Lower Left  Invert new data Off E  Upper Left       F  Right Half  G  Left Half  p     Autorange Settings        H  Upper Half    I  Lower Half  Autorange Mode MinMax Noi   L J  Noise Min factor  2 00    Max Noise factor 5 00    p        BLIP Parameters                                                                          Detector Electron Gain 1 91  Horizontal flip On  Electrons per ADU 3191 00   Vertical flip on  Blanked off Flux  ADU  0 00   Transpose Off IL Jl  Direction indicator On  North Direction Up  East Direction Left                         Screen Mode             Colors 3 A  Default VGA    B  64 Gray level  Monitor Color       16 Gray SVGA  Log levels  16 gray only  off   D  Blue Red Yellow SVGA  VGA Screen Mode Heat SVGA       Heat SVGA  USER color file test4 pal       User Defined  Force B W mode Off      J             5 22 99                     12 2  DISP  Command Line Menus             153                                                                         
206. jname is the object name  If  ais entered without any arguments  program  prompts user for data     d delete object s  from list  number n or all of type TYP     i insert added source at object number n   q  query  mode  confirms that you want to delete the source   1 number of lines per object list page  default 66    r specify range of objects to read in  where n1 and n2 are the start and end object number      if list changed  output new list to outlist  default output file is same as sourcefile     s sort the entire list by        The objects of type SAO will be placed following the target object    t output a file for SO telescopes   ti output a file for the IRTF telescope   tu output a file for UH telescopes   tk output a file for UKIRT    p print out object list  after other operations are complete   If a type string is included  only those  types are printed     m merge two source lists  Sourcefile is the primary file  any objects not in sourcefile but in otherlist  will be added  If the source exists in both  the sourcefile entry is used  The   sources are added to the end of the list  unless sorting     f find SAO catalog stars for the targets  The number n specifies the number of SAO stars to find for  each source  The optional path tells where the SAO data files are located  The sources  are automatically sorted in this option     5 22 99   4         OBSLIST Program 121    Regardless of the order of the command line switches  the program proceeds      the followin
207. k dormitory rooms  meals  cryogens  and equipment transportation should  be made about 10 days in advance with the Steward Observatory operations office  Penny Schmitt   Room  350 Tel  520 621 7659   Normally three Steward Observatory downstairs dormitory rooms  are reserved for 90 inch observers  More than three observers in the telescope control room require  permission from the director in advance  The normal cryogen requirement for up to eight nights is  a 60 liter dewar of LHe  For a four night run  a 30 liter dewar would be adequate if the cryostat is  precooled in Tucson     The equipment can be transported to and from Kitt Peak by the Steward Observatory day crew using  an enclosed van  The van leaves at 8 00 in the morning     3 2 2 Mt Hopkins Arrangements    For information on arrangements for Mt Hopkins  check the MMT home page  Section 2 1      3 2 3 Hawaii Mauna Kea Arrangements       Travel arrangements     For observing in Hawaii  it works best to arrive at the mountain lodging  Hale Pohaku  the evening  of the third day before the night observing begins and to depart the morning of the day after the end  of the last observing night     The arrival time allows the first evening for taking the cryostat to the summit to put it on a vacuum  pump  one full day for instrument setup  cryostat cooldown  and test and a second full day for  correcting problems  On the observing day  one half day is devoted to mounting the instrument   setting up in the control room  and
208. l line causing an  air ice plug     LHe consumption is approximately 8 liters cool down and first fill plus 4 liters per day transfer  thereafter    A14 3 5 Topping Off Liquid Helium Reservoir    With a supply dewar pressure of a few ounces with the MIRAC transfer line  two liters of LHe  should transfer in about 5 minutes  For a pressure of 3 to 5 Ibs at the IRTF and UKIRT  this will  take about 10 minutes  The LHe safety cap should be on the LHe vent at all times except  during transfer to prevent air entering the LHe fill line causing an air ice plug     A14 3 6 Cryogen Transfer at the Telescope    Instructions are given in Appendix 15     A14 3 7 Measuring Cryogen Levels    The MIRAC level sensor indicates full scale at room temperature  When it reaches a liquid  nitrogen surface  the reading drops to 0 8 of full scale  It recovers to full scale slowly after being  raised above the surface  As the level sensor is lowered in to the LHe chamber the reading slowly  drops to 0 2 of full scale  When it reaches the LHe surface  the reading abruptly drops to zero   The reading recovers immediately to 0 2 of full scale when the sensor is raised above the LHe  level  It is important to insert the sensor very slowly into the LHe chamber to avoid rapid boil off  and loss of cryogen     5 22 99   14  Hardware Preparation and Setup 183    A14 3 8 Cryogen Capacity  Hold Time  and Consumption    The cryostat capacity  remaining cryogen as a function of level  and hold time is given in  
209. lanked off camera output  then count detents and watch the  display to reach the desired pupil  The actuator should then be fully withdrawn     Table A14 4 Cryostat Pupil Slide    Position Hole Dia  Focal Ratio Telescope   cm  f   1 CW Blank  2    167 45 S O  1 5  2 3 m  3    196 36 8           UKIRT  4 231 30 CTIO4m  5 420 17 6 SOFIA  6 CCW 470 15 2 MMT 6 5 m    The magnification slide is continuously adjustable between magnifications  43 and 1 14 with 7  fixed detent positions as given in Table   14 5  The magnification actuator is the one closest to  the vacuum valve  equidistant from both filter wheel motors  The actuator must be inserted and  rotated counterclockwise until it engages the slide key  then rotated counterclockwise  looking up  towards the bottom of the dewar  to be captured  Pushing in until it stops  with a small space  between the knurled knob and the dewar base plate  moves the stage to the highest magnification  position  To move the slide from high to the next detent position  withdraw gently while feeling  for the detent  The actuator must then be rotated clockwise to disengage the slide and fully  withdrawn  The motion of the slide from lowest to highest magnification is 5 3 cm  The nominal  detent for IRTF and UKIRT is the fully out positions  magnification  43  This gives plate scales of   33 and  27 arcsec pixel and field sizes of 42 and 33 arcsec for the IRTF and UKIRT  respectively    5 22 99   14  Hardware Preparation and Setup 195     Table A1
210. lator    LM7815  LM7915  LM7815  LM7915  LM337H  LM7905  LM7815  LM7915  LM7805  LM7815  LM7915    Supply  Watts    Temp Monitor      Pos Supply   1                  2 Preamp     3 Bias     4   1        5              6        7 Signal Proc    8 Signal Proc    9 Digital   10   11    Total    Temp Monitor      Table A18 2 Power Supply Ratings    Spec  Input    23   23  23   23  12   9  23   23  10  23   23    Cable  Watts       25  24  13  20   01  2 5  3 6  3 4  49  09  05    59 5    Minimum  Input    17 7    17 7    17 7    7 5  17 7    Electronics  Watts    2 7  3 0  1 8  1 7  6  10 1  41 1  38 6  83 9  1 5  8    185 8    5 22 99   19  Cryostat Disassembly and Assembly 225    Appendix 19  Cryostat Disassembly and Assembly    A19 1 Basic cryostat disassembly     1      2    3      4      5      6      7      8     Release cryostat vacuum  This is best done with     gas with a pressure about 2 psi  Let gas  into the cryostat slowly to avoid large pressure differences which could damage the  radiation shields and optics housing     Clear work table and provide electrically conductive pad and wrist cuff     Collect Cryostat Disassembly tools and screws plastic box  Camera Setup plastic box  Mechanical tools plastic box  Two or more large plastic bags for covering parts  Small  freezer  bags for small parts  Latex gloves  Lab tissues  Cotton swabs  Alcohol   O  ring grease  MIRAC cryostat assembly skirts  located in the MIRAC Working Files Cryostat  Assembly folder    Set cryost
211. ld have been completed  The Nightly Startup Tasks  Section 6 1   should be carried out along with the setup tasks as indicated     1  Turn on MIRAC PC and monitor  Ifa floppy disk is in the floppy drive  it must be removed    Computer should boot  connect to the network and show the DOS prompt      To use a laser printer connected directly to the MIRAC PC  turn on the printer before running  MIRAC  Prntinit will be automatically executed to download grayscale character font     2  MIRAC program backup floppy disks  In the event of program loss or corruption  the MIRAC  backup floppy disks include a floppy boot disk and all directories and files required to operate  MIRAC  These are packed in Crate 8     3  Establish network connection after moving to a telescope     After MIRAC has been moved to telescope  from the DOS prompt execute the appropriate  command  NETSOKP  NETIRTF  NETUKIRT  NETMANOA  NETMMT  NETLAB  or  NONET  The appropriate network program  PCNFS or PathWorks  will be selected with the  required settings for the given telescope and the computer will be rebooted     The I   and J   drives should be automatically mounted on the host computer with the  subdirectory MIRAC     At the Steward Observatory 2 3 m telescope   bokobs default log in directory   u3b bokobs    MIRAC User s Manual    i   ulb bokobs  j   u3b bokobs  largest disk space     At the IRTF    MIRAC will use a guest account created by the first observer  It is necessary to request that  the IRTF syst
212. le  which provides the TCP and UDP  transport services that allow an application to access the underlying network  It is a TSR  program which uses about 60 Kbytes of memory  RTM is required for using the IRTF programs  which perform the beam switching and offset functions via Ethernet     Use the cleaning diskette and clean the PC floppy drives     Carry out Nightly Startup Tasks 1    6      Check program values  Obs  Init Program Values  TCS command confirm off  S O  90 in   on   RS232 CHKSUM off  S O  90 in   on   Min chop wait cycles 1   lt esc gt     10  Check Mode entries    Obs  Mode  Fast data mode off  normal mode   Continuous coimaging off  Ask for offsets off  Beep off  Do all offsets in 1 run on   Off would require executing Run for each offset position     lt esc gt     11  Carry out Nightly Startup Tasks 7    8      12  Check Observing Parameters    Obs  Header Observing Parameters  Burst mode off  Sample mode single  Level of flux medium    24 MIRAC User s Manual    Level of off src chop beam  normally set to 1     esc     Chop and nod parameter settings are given in Section 6 1  Nightly startup tasks Item 9     13  Check Telescope and site  Obs  Header Telescope and site  Confirm that site and telescope are correct    esc      14  Check Optics parameters  Obs  Header Filters and Optics  Arcsec pixel 133           27   UKIRT  for cryostat  magnification position 2  magnification    43     15  Check telescope control parameters  Obs  Telescope Telescope control  
213. le A2 3     The MIRAC entries are an inhomogeneous set which cannot be relied upon to more than a few  hundredths of a magnitude  The usefulness is that they cover all MIRAC filter bands  The Cohen  and Hanner entries should be more internally consistent and accurate  However  some of their values  differ from each other by a few hundredths of a magnitude as well     The Objects marked with a plus     are most commonly used as standards with MIRAC       Beta And    Alpha Ari    Alpha Tau    Alpha Aur    Alpha Ori   Alpha Car    Alpha CMa    Alpha CMi    Beta Gem    Lambda Vel    Alpha Hya    IRC 10216    Mu UMa   Epsilon Mus   Gamma Cru    Alpha Boo    Sigma Lib    Alpha Sco  Alpha Her    Gamma Dra  Eta Sgr    Alpha Lyr      Gamma Aql    Alpha Aql  Mu Cep      Beta Peg    MIRAC  Cohen  Hanner  MIRAC  MIRAC  Cohen  Hanner  MIRAC  MIRAC  MIRAC  MIRAC  Cohen  MIRAC  MIRAC  Cohen  Hanner  MIRAC  MIRAC  Cohen  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC  Cohen  Hanner  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC  MIRAC  Cohen  MIRAC  Hanner  MIRAC  MIRAC  Cohen  MIRAC  Hanner       Table A2 1 Standard Stars with Magnitudes Ordered by Right Ascension    RA    01 06    02 04  04 33    05 12  05 52  06 22  06 42    07 36  07 42    09 06  09 25    09 45  10 19  12 15  12 28  14 13    15 01  16 26  17 12  17 55  18 14  18 35    19 43    19 48  21 42    23 01     35 21     23 13   16 24     45 56   07 23   52 40   16 38     05 21   28 08     43 14   08 26     13 31   41 45   67 41   56 50   19 26     25 05
214. le in the o  irtfMMYY directory to your data directory     5 22 99 8  Short Form Instructions    8 4 5 Backup  Start tape backup with DOS command    write     If you want to backup by ftp ing files to a home computer  start now or later   Don t forget your log file     8 4 6 Turn off the MIRAC PC and monitor  or leave it running if writing a tape    8 4 7 Hardware checks  Check that LN2 slide at camera is CLOSED    57    58    MIRAC User s Manual    5 22 99 9  Using                 Program 59    9  Using the MIRAC Program    9 1 Running the MIRAC Program on a PC Stand Alone    The MIRAC program can be run on almost any PC under DOS or under a DOS window in Microsoft  Windows or Linux  The program with readme txt instructions and required files can be obtained from  the MIRAC home page  Section 2 1  under Observing Programs  mrcfiles zip  The program contains  a simulator mode which blocks hardware related commands and simulates data taking  This can be  turned on in the menu OBS  Init Simulation Parameters Simulate data On       parts of the program  can be run in this mode     9 2 Directory Structure    The MIRAC3 EXE and MIRAC BAT programs must be in a directory in the DOS path  This is  presently C  MIRAC  When the MIRAC program is executed  the program searches the path to find  where                     15 located  and then uses that directory as the program directory  This is where  it looks for  MIRAC HLP  MIRAC FIL  and the printers file  The printers definition file 
215. led spectrum of  this star    Alpha Lyr Var Var    Alpha Ori    Within errors estimated to be 2 percent  3 percent at 20 microns   Cohen et al   1995   do not detect variability in the assembled spectrum of this star     Var Semi regular pulsating star    112    Alpha Sco    Alpha Tau    Beta And    Alpha Boo    Beta Gem    Beta Peg    MIRAC User   s Manual    Has readily observable extended dust envelop making it a poor choice for point  spread function reference  Radial velocity variations with a period of  1 yr were  detected by Smith et al   1989 AJ 98 2233     Suspected Var Semi regular pulsating star    Radial velocity variations with a period of  1 yr were detected by Smith et al   1989  AJ 98 2233     Var Var    Larson et al   1999 ASP Conf  series  find that this star has radial velocity variations  on the order of 1 to 2 years  Hatzes  amp  Cochran  1998 A amp AS 128 207  detect long  term radial velocity variations  Within errors estimated to be 2 percent  3 percent at  20 microns   Cohen et al   1995  do not detect variability in the assembled spectrum  of this star  Hammersley et al   1998  do not detect variability at mid ir wavelengths  using IRTF  and they include it in their new list of mid ir standards     Suspected Var Var    Larson et al   1999 ASP Conf  series  find that this star has radial velocity variations  on the order of 1 to 2 years  Within errors estimated to be 2 percent  3 percent at 20  microns   Cohen et al   1995  do not detect variability i
216. linear  and that the out of   range pixels are  0 0  when the highest 18 dark current pixels are masked  with hill 14 msk   When  OBS  Next Link Frame Filter is on and the files  sky frm  or  dome frm  are chosen  these values are    42 MIRAC User s Manual    automatically set for the selected filter  These files can be edited or new  frm files created in  OBS  Header Hardware Frametime filter links     Table 7 2 Filter Change Times    Small CVF change  7 8 to 8 0 um  3 seconds  Large CVF change  7 8 to 13 um  6  Adjacent fixed filter change  8 8 to 9 8 uum  3  Distant fixed filter change  8 8 to 20 6 Q3   15  Large change with both filter wheels changing 29    7 4 Macro Aids    Macros can be run from the function keys or from OBS  Next Macros  They        be used to automate  the settings in the next menus for various types of observations  New macros can be created  saved   and assigned to macro keys  They are created by recording the keyed sequence while it is carried  out  starting and ending with Alt M and saving with UTIL  Macro Save   The maximum allowable  key strokes in a macro is 255  The current macro key assignments are given by UTIL  Macro Display  Macro Definitions  Up to 10 macros can be assigned to a key with UTIL  Macro Assign Macro to  a Key  The macros in the observe directory can be listed from the DOS prompt with   dir   mrm  The macros are ASCII files  The files are cryptic with just the keys used to create the macro  but they  can be edited with the DOS
217. ll four Chop   Nod Beams    9 9 1 4 Nod  2 beam     This mode takes 2 images  one at each nod beam position  The mode is selected by setting the  Grab Chop switch to GRAB and setting the nod mode to  2 beam nod   First an image    is taken  in the first nod position  then the telescope is offset and a second image   2 is taken  The source is  assumed to be in the first nod beam  so the image arithmetic to subtract the background is 11 12     9 9 1 5 Nod  4 beam     This mode is similar to the 2 beam nod mode  except that a total of four images are taken  first one  image in beam 2  then 2 images in beam 1  then one image in beam 2  To select this mode  the  Grab Chop switch is set to GRAB and the nod mode set to  4 beam nod   The purpose of this mode  is to bracket the on source images with two off source images to remove the effects of any linear drift  in the sky background  The image is assumed to be in beam 1  so the image arithmetic for  background subtraction is I2   I3   I1   I4  Note that for this mode  the user selects the integration  time for each of the four images  so that the time spent on source will be twice this time  In all other  modes  the source is only in one of the beams  so that the integration time selected for each beam is  the same as the on source time     5 22 99 9  Using                 Program 71    9 9 2 Fast Data Mode    In the various modes of data taking  the file that is saved to the disk contains a header and the on   and off source images
218. lue or white are data    Temperature monitor cable to camera electronics temperature monitor connector   Filter controller RS 232 cable to filter controller 9 pin connector   AC power cord in cable bundle to filter controller AC power cord    A14 7 Temperature Monitor and Controller    The temperature monitor controller is mounted at the back of the camera electronics beneath the  connector panel  The temperature monitor operates anytime the temperature monitor power  supply switch is on  and the cables are connected   It provides five temperatures displayed on the  MIRAC status display     Ambient temperature  determined by a thermistor on an 18 inch cable hanging out of the  camera electronics connector panel    Electronics temperature  determined by a thermistor mounted on one of the signal  processor boards  marked at the edge of the board   This should normally be  between 20 and 30 C    A D temperature  determined by a thermistor mounted on an A D heat sink on one of the  signal processor boards  marked at the edge of the board   This should be between  35 and 45 C  not above 50 C      5 22 99   14  Hardware Preparation and Setup 193    Detector temperature  determined by a Lakeshore Cryogenics diode mounted on the  detector mounting stage  This accurately measures the temperature of the  temperature controlled stage  but not of the detector itself which is poorly heat sunk  to the chip carrier and is self heated to a higher temperature  which depends on    operating pa
219. mall manila colored cardboard square  in the  MIRAC Working Files Cryostat Assembly folder  over the detector mask plate  Tape the  larger square over the LHe baffle opening     Remove the two ribbon cables from the detector assembly and replace with shorting plugs     Disconnect heater temperature sensor plug and the filter home switch plug  small in line  plugs  taking care not to damage the wires     Remove the detector slide actuator rod  This is done by loosening the locking socket head  head screw by reaching across the top of the detector mask with a 5 64 ball driver  Note  how screw mates with dimple on shaft     Remove the 3 vented socket head screws in the optical assembly plate and a fourth screw  on the filter wheel gear assembly below the optics plate and lift off the optical assembly  taking care not to damage wires  Put assembly aside under a protective plastic sheet      At this point it is possible service the filters or to remove the detector assembly  which ever  is required     5 22 99   19  Cryostat Disassembly and Assembly 225    A19 3 Removal of detector stage assembly     1    2      3     Put on grounded wrist cuff         steps in Section A19 2 must be completed first     Remove four socket head screws at the base of the detector slide bracket  The inner two  screws are longer     Set aside and protect the detector slide assembly taking care not to damage the wires     A19 4 Removal filter wheels and filters     1      2      3      4     To access t
220. mera e 7 10   5   Quick look display and processing 11 13   Post observing data reduction A6     10  MIRAC files and menus All   A12  Shipping and setup and test   13     15  Trouble shooting and service   16    19    Unix commands  Tape Backup  Weather  and Address information A20   A24    MIRAC User s Manual    5 23 99 2  Overview        Performance 3    2  Overview and Performance    2 1              on the World Wide Web  The MIRAC home page can be reached on the World Wide Web with the addresses     MIRAC  http   cfa www harvard edu  jhora mirac mirac html  Steward Observatory  http   www as arizona edu   Steward Observatory  Facilities  Technology Development  Mid Infrared Detectors and Instruments  MIRAC3  MMT  http   www as arizona edu   Specific Projects and Related Institutions  Multiple Mirror Telescope Observatory   MMT Instrumentation  PI instruments  MIRAC3  Harvard SAO Center for Astrophysics  http   cfa www harvard edu  a number of telescopes  CfA is involved in a number of other projects  MIRAC3  IRTF  http   irtf ifa hawaii edu   Facility Instrumentation  Visitors  Instrumentation  MIRAC3  UKIRT  http   www jach hawaii edu UKIRT home html  Instruments  Visiting Instruments  MIRAC3  recent results here    The home page contains a MIRAC3 description  sensitivity  recent results  MIRAC3 Manual  work  station programs for preparation for observing and for data reduction  MIRAC camera PC programs   and references     2 2 General Description of MIRAC3    Detailed 
221. missions chmod nnn filename  chmod c p     c p     filename    n  a digit from 0 to 7  sets the access level for  the user  owner   group  and others  public    respectively  c is one          user  g   group  o    others  or a   all  p is one ofr   read access  w    Write access  or x   execute access    Setting Default Permissions umask ugo  ugo is a  3 digit  number  Each digit restricts  the default permissions for the   user  group and others  respectively      Changing Modification Time touch filename    Making Links In oldname new name  In  s oldname new name  Seeing File Types L S   F    13   Encrypting Files  Source Files crypt   source   encrypted    Editing vi  x encrypted    crypt    encrypted   more  crypt    encrypted  gt  text    Decrypting Files    crypt asks for the encryption key   14  Searching with more    Run more more filename    5 22 99   Next Line Return  Next 11 Lines d  Next Page SPACE  Search for Pattern  pattern  Next Occurrence n  Next File       15         Directory Stack    Change Directory  Push pushed directory  Change to Top Directory  Pop popped  Show Stack dias  2  Commands       2 1  Command Line Special Characters   Quotes and Escape   Join Words        Suppress Filename  Variable Substitutions  Escape Character    Separation  Continuation   Command Separation     Command Line Continuation  Return    2 2  I O Redirection and Pipes    Standard Output  gt    gt     Appending to Standard Output  gt  gt    gt  gt     Standard Input  lt   Stan
222. mpl plot mode One Trace  Make Scope Header   Obs Header   Begin Scope Display                Edit Scope Header  Same as OBS  Header  Change Display Params  Same as DISP  Begin Contour Parameters Plot Params    Edit       A12 3 6 UTIL  Camera    Init Camera   Begin Coimage   Stop Coimage   Fifo Reset   Master Reset   Load Col Reg   Read Column   Display Data   Coimage Ignore Off  Xmit Continuous Resets  Number of frames coim  Probe DSP Status                         162 MIRAC User   s Manual  A12 4 PRN  Command Line Menus  PRN  Init Mode Print OBS DISP UTIL Quit    A12 4 1 PRN  Init    p   Printer Initialize          Printers   gt     Current Page   7                           Add a printer       Edit current  Network lw  Choose printer   Delete printer  Network lw  Save Printers c  mirac printers dat  Read Printer file c  mirac printers dat                                                 p     Printer Parameters          p    Select Printer       Printer Name Network lw  Device LPT2 Console  Maximum Width 140 DeskJet 500 HP  Title Init ASCII codes LaserJet IIP HP  Graph Init ASCII codes Text file mirac out  Reset String ASCII codes Network PS LPT2  Postscript printer On Network PS LPT3  i    PS File pxout nnn                            Enter Codes          Current codes    Enter  lt RET gt  to accept   lt   5   gt  to stop  amp  save                    all previous   Alt F1   to cancel    Character 4  1   0            LL             f            12 4 2 PRN  Mode      Gray Map
223. mples per frame  and  number of resets per frame  The number of images coadded for a single observation  which gives  what we call the integration time  should not matter if the result is scaled by the number of coadds   The pattern noise includes pixel and multiplexer channel voltage offsets in the array and in the signal  processing electronics  The pattern noise will depend on frame time because of the dark current  It  will also depend on the method and number of resets  In general  a single reset will not set each pixel  to a hard reset value  but will leave a residual depending on the flux level and the properties of that  pixel     To obtain a useful image  it is necessary to subtract the pattern noise using an image with the same  on chip exposure time  For an optical CCD this is what is done when a dark slide exposure is  obtained and subtracted from the sky image     If there is substantial background flux in the sky image  as is the case in the mid IR  this will leave  a pattern due to the gain variations from pixel to pixel resulting from differences in the detector  in  the array read out multiplexer  and in the signal processing electronics  To correct for this it is  necessary to multiply by a gain map  which we define to be the reciprocal of the relative gain for each  pixel normalized to a mean of unity     For the mid IR  when beam switching is used with secondary chopping or telescope nodding  the flux  level and the camera settings will be the same in both
224. n or up and over  shutter is moved across the aperture of the telescope  If the camera beam is properly  pointed at the secondary  the traces will slowly rise as the telescope aperture views the  thermal emission from the screen or shutter  If the beam is completely off the secondary   directly viewing the cold sky  there will be no change until the beam is abruptly cut by the  screen or shutter     If the camera beam is completely off the secondary  use the wind screen or shutter partially cutting  the camera beam to locate the camera beam and adjust the appropriate dichroic dial to move the  beam toward the secondary tracking it by moving the wind screen or shutter     Step 2  IRTF   With the dome shutter open and mirror cover closed  open the mirror  cover hatch  Adjust the dichroics to align the beam on the secondary by maximizing the  reflection by the secondary of warm radiation from the mirror cover  The adjustments  should be made so that the two traces and their ends are maximized together     Step 2  UKIRT   Follow the same procedure as the IRTF with the mirror covers closed   There is no hatch to open since on UKIRT the mirror covers do not block the view from  the instrument of the secondary and sky around it     Step 2  S O  2 3 m   With the mirror covers open  partially close the shutter and wind  screens to leave a small opening somewhat larger than the secondary to allow the sky to be  viewed around the secondary  Proceed as described for the IRTF     Record t
225. n screen coordinates is in the upper left corner of the screen  The typical  VGA screen is 640 in the X direction and 480 in the Y direction  The EGA screen is 640x350  The  dimensions entered is the size of the plot box  usually this should be smaller than the maximum screen    5 22 99 11  Reading Stored Data and Data Processing 89    size so that there is room for labels around the edges of the plot  The log options can apply to either  or both axes  and only even decades are displayed  If manually changing the X or Y data limits   Autoscale is automatically turned off     Labels of Plot  This menu specifies the plot title  the X and Y labels  and how the tic marks are  labeled  Major tics are labeled  minor tics are not  Usually the major tic size is set to be twice the  minor tic size  The number of decimal places in the tic labels can be specified  as well as the number  of places to allow in front of the decimal  If 0 0 is entered  the labels are written in exponential  format     Contour plot levels  The value of the contour levels can be manually set here  If the auto contour  level flag is set  these levels are spaced evenly from the data minimum to the data maximum     Gray level scaling  The gray levels can be autoscaled  or the levels set manually here  These  parameters also apply to the default image display     Printer Setup  This affects the printer parameters for the Hardcopy function described below  This  has no effect on the printer definitions available u
226. n the assembled spectrum of  this star     Suspected Var Var    Hatzes  amp  Cochran  1998 A amp AS 128 207  detect long term radial velocity variations   Within errors estimated to be 2 percent  3 percent at 20 microns  Cohen et al   1995   do not detect variability in the assembled spectrum of this star  Hammersley et al    1998  do not detect variability at mid ir wavelengths using IRTF  and they include  it in their new list of mid ir standards     Suspected Var Var    Within errors estimated to be 2 percent  3 percent at 20 microns  Cohen et al   1995   do not detect variability in the assembled spectrum of this star  Hatzes  amp  Cochran   1998 A amp AS 128 207  detect long term radial velocity variations     Var Pulsating Var    Larson et al   1999 ASP Conf  series  do not observe radial velocity variations on the  order of 1 to 2 years for this star  Within errors estimated to be 2 percent  3 percent  at 20 microns  Cohen et al   1995  do not detect variability in the assembled  spectrum of this star     45 22 99   2  Standard IR Stars 113    Epsilon Mus Var Var  Eta Sgr Var Var  Gamma Aql               Star in Double System  Gama Cru Suspected Var Var    Merdock et al   1992 MNRAS 254 27  detect periodic radial velocity variations for  this star     Gamma Dra               Star in Double System    Larson et al   1999 ASP Conf  series  do not observe radial velocity variations on the  order of 1 to 2 years for this star     IRC 10216      Possible PN    Haniff  1998 A
227. name and  path can also be entered in the MIRAC program and stored as part of the header file  A list of the  files required in the program directory is given in Appendix 11     MIRAC should be run from an observing directory which contains header  mask  gain  flatfield   command  filter frame  macro  and plot parameter files  This is in the O  drove and is created for the  particular observing run  designated by the telescope  month  and year  e g      5      0292 or  G  IRTF0692  Other default directories can be established for lab testing or other purposes  such as  O  BILLTEST  O  JOETEST  etc  A list of the files required in the observing directory is given in  Appendix 11     When MIRAC is executed  it searches for a header file name on the command line  For example    MIRAC LABTEST  where LABTEST HDR is a header file in the default directory  If there is no  command line parameter  the program uses the CURRENT HDR file in the default directory  This  is the file that is automatically written when the program is exited  It contains all of the program and  camera parameters except the filter settings and camera magnification  This file makes it easy to start  the program again with all the same parameter settings when it was terminated  If the  CURRENT HDR file is not found  the program stops displaying a message which explains how the  program is to be run  One can also type  MIRAC INIT  to start new without a header file  If the  program is terminated abnormally by a c
228. nd date are  established  there is a  shorthand notation  to designate a data file which consists of the index letter  and the extension number  This notation can be used anytime a range of names can be entered  such  as in the gain map calculation utility or the mosaic display function  For example  if a GRAB mode  observation for the gain map has the file name C911203A 009  the shorter string  a9  can be entered  instead  provided that the path and the remaining part of the file name is given by the data directory  and the current DOS date  or by a previously entered path and full file name  If multiple files are  desired  they can be entered separated by commas  or a hyphen used to specify all files between two  extremes  For example  if the 4th  5th  and 17th through the 23rd files are desired  the following  string is entered     4   5   17   23   Note that the zeros in the extension are not necessary  and that  the index letter must precede every number  For example  the string  a17 23  is not valid     In determining the file name based on the shorthand notation  the program reconstructs a full path  and filename using the numbers and letters provided and the default or previously entered directory  and date  For example  the first time the user constructs a mosaic  and wishes to combine the first  10 files  plus files 23 31  from the night of March 17  1995 the necessary file range string would be   C950317A 001 a10 a23 a31   Note that the first file name is written o
229. nder the PRN  command line  The printer selection   resolution mode  and size of plot have to be set  Printer choices include Postscript printing to a file  or to Ethernet  The orientation  portrait 1 or landscape 0  also must be set  Usually landscape is  chosen to make the plot as big as possible on the printed page     Save  Read files  The current parameters in these menus can be saved to a file  or read in from a  previously existing file  There is a default file for each plot type  and the information can be saved  to that file  or a file name of the user   s choosing     11 2 7 2 Redraw    This function simply redraws the plot with the current parameters  This is useful if the screen has  become cluttered for some reason  such as using the Level command described below  or the Value  command     11 2 7 3 Fit  1 D     This option performs a least squares fit of a gaussian plus background or Moffat curve to the data  currently being displayed  The fit function is selected      the DISP  Init Statistics Fit menu  The  background has a constant  linear  and quadratic term  The fit parameters are polynomial parameters       b  and c  width parameter o  peak value     position        and FWHM  for the Moffat fit   Once the  fit is complete  the fitted function can be plotted to the screen either using the same X intervals as the  data  or by using as small an X interval as possible  The complete fitted function is plotted in light  cyan  and the background terms alone are pl
230. near the peak     The files to be read in can be selected in two ways  First  a range of images can be entered by the  user as a string  in the usual shorthand notation  The other way is to construct a DOS text file which  contains file names of the images to combine  In this second case  the name of the DOS text file with  the list of image file names is entered in the MOSAIC menu     The images can be expanded as they are read in  before adding them to the final image  In this case   the offsets are calculated to the nearest subpixel  and the positioning of each individual image is more  accurate  Expanding the images also allows the program to properly adjust for the half pixel shift  between the two halves of the array  When the expansion factor is a multiple of 2  the halves are  offset correctly before the maps are coadded  The pixel at  1 1  is always the reference for the offset  stored in the header  The values assigned to the sub pixels can be determined by a weighted sum of  neighboring pixels normalized for flux conservation  default expansion   or by a simple assignment  of the original value scaled by the expansion factor to each of the subpixels  force flat expansion      As of the printing date of this manual  the routine does not correct for optics distortion     When the maps are combined  the result is placed in the image display buffer  The offset position   0 0  is placed in the center  The final image size is then the limits of the good data after all th
231. ng  If required  command file must be turned on in Obs  Next  menu  Start observation with F10  Savrdrun     F6 Dispparm Sets display parameters to canonical values  Section 5 2  Item 16     F7   F8   F9   F10 Savrdrun   For standard star and program object to start observing with save and offsets   Save  on  Read offsets  on  Run    7 5 Command Files    The MIRAC3 program has the capability to execute a command file  script  that can be written to  take a long series of observations  The command file is a DOS ASCII text file that contains  commands and macros  one per line  Comments can be put on any line after the semicolon      character  Arguments on a line are separated by spaces or tabs  A command file is carried out by  Run when Obs  Next Use Command File is on     Available commands are     EM name   execute the MIRAC macro with the filename  name   The macro file must be created  and saved in the normal way  The macro is executed as if starting from the OBS  top command  line  The macro name should not include a file extension  this is assumed to be   MRM     END   end the command file  This command must be the last command in a valid MIRAC command  file    FILTER  cvf xx xx  or  name    change filters to the given CVF wavelength  or to the given filter  name  Both wheels are positioned correctly for the given filter or CVF position  If setting the  CVF  one types FILTER CVF followed by the wavelength in microns between 7 68 and 14 5   If setting to one of the discre
232. nolulu office  joseph  hubble ifa hawaii edu     IRTF secretary  Karen Hughes  hughes   hubble ifa hawaii edu     IRTF support scientist             observatory superintendent  Paul Jensen  jensen  herschel ifa hawaii edu      UKIRT Observatory Arrangements        Forms for UKIRT arrangements can be found on the UKIRT home page   http   www  jach hawaii edu UKIRT home html  Arrangements  similar to those made for the IRTF  should be made with Andy Adamson  a adamson  jach hawaii edu  or the support scientist     3 3 IRTF Requirements List  Example  MIRAC Requirements IRTF Nov 7 23  1998    MIRAC team coverage  Joe Hora  Aditya Dayal and I will be covering the  run with a gap the night of Nov 16 when Aditya will have just arrived   Casey Lisse will be in charge of the camera that night     Shipping  MIRAC will be shipped from Tucson via FedEx  Oct 27  to arrive in Hilo by Friday Oct 30 or Monday Nov 2     Unpack and setup  This will be carried out  Nov 4  Wed evening and Nov 5 Thu by Bill Hoffmann  Massimo Marengo   and Marc Kassis    16 MIRAC User s Manual    Vacuum turbo pump  This will be required  Nov 4  Wed evening    Liquid nitrogen   Nov 5  Thu 12 liters cooldown   Nov 6 23  4 liters day including boil off and transfer  Total 72 1     Liquid helium   Nov 5  Thu 10 liters cooldown   8 9 is typical   Nov 6 23  5 liters day transfer only  5 is typical   Total 100 1   transfer only     Note  In the lab  MIRAC3 uses 8 liters for cooldown and 4 liters  a day thereafter includ
233. o be read  e g  44960406    Leave New Tar filename as       If more than one directory is to be backed up  press F4 and select the additional directories  for the input path and     for the output path    Press F10  done  to return to the Write Tar Tape Menu   Press F10  done  to continue   In response to  Warning   press F1  Append after data on Tape    In response to second  Warning  press F10 to continue   When backup is finished  press   esc   to exit program    When in the main menu  select Tape Utilities to obtain a summary of what is on the tape     A21 2 Backing up Data with NovaBack on MIRAC PC DAT Drive    NovaBack provides a local backup tape  readable only by the PC  It is useful for backing up the  system and program files  It is less useful for backing up data because of the lack of portability     Locate current backup DAT tape  Each DAT tape holds 2 Gbyte  sufficient for all the data  inarun     reasonable approach is to use two tapes  alternating adding the current  and previous nights data to the tape    Add to label current observing date  Insert tape into ALR computer    From DOS prompt   novaback   enter     Using the down cursor key on the keyboard  choose  Select files for backup    enter      236 MIRAC User s Manual    Select drive  volume  with cursor arrows and   enter    D     Select sub directories for backup  e g  d951202  with cursor arrows and spacebar  To backup entire drive  select the drive with spacebar   Move to next menu with F10 key   Cho
234. o large connectors  Signal and Digital  at the top of the cryostat   one at a time and replace with the appropriate MS connector shorting caps  Keep one hand on the  cryostat to keep yourself grounded during this process  Remove the other end of the digital cable  from the electronics connector panel and set this short cable aside  This requires a screwdriver     3  Remove the two smaller connectors  Switch and Temp  from the top of the cryostat  Remove  the other end of the Switch cable from the filter controller at the bottom of the electronics  This  requires a screwdriver     4  Remove the  D  connector at the base of the cryostat near the motors  Remove the other end  of this cable from the filter controller at the bottom of the electronics  This requires a screwdriver     5  At the camera electronics  disconnect the pair of fiber optical cables  The coupling unit between  cables should be left on the ends going into the camera electronics  Put the small black protectors  on the ends of the long cable and the large red protectors on the coupler ends  Tuck the latter into  the electronics box  Remove the other ends of the fiber cable from the telescope fiber cable plate and  install black protectors     6  Disconnect the 9 pin RS232      connector at the filter controller below the camera electronics   This requires a screwdriver     7  Disconnect the MS connector  Temperature Monitor  at the electronics panel   8  Disconnect the AC power cord from the filter controller b
235. od observations  or the off source pairs from chop nod observations  form a standard  deviation map  Cut off the high noise pixels     After editing the mask  it should be saved in the observing  default  directory in the form  O HNL1295 MSK  The letters are H  high   N  noise   L  low      76 MIRAC User s Manual    10 2 Gain Map Generation    The function UTIL  Functi Gain Map Calculation provides a convenient means for generating a gain  map  which we define to be the reciprocal of the relative pixel gains normalized to a mean of unity   Thus the gain map must be multiplied times an image to  flatten it   The gain map calculation takes  several images taken at two flux levels  subtracts the average at one flux level from the average at the  other  finds the average of the difference and normalizes the map by dividing by that value  and then  inverts the map to generate the multiplicative gain map  Mask  Gain  and Flat should be off during  this calculation in order that the gain for all pixels be calculated  After the gain is saved  it can be  renormalized for any particular mask  The following are possible approaches to obtaining images at  two flux levels  The first is currently preferred     1  Dome and sky  Set the frame time appropriate for dome images within the detector linear range   With the dome closed and mirror covers open  obtain 10 grab mode images at a 2 sec integration  time  With the same frame time  repeat with the mirror covers open looking at the zenith 
236. of the primary and the flux   particularly at one side of the array  should increase  Record the read out values for each  extreme at which either column 1 or column 2 increases an equal amount  Set the control  dial midway between  Repeat for declination  except for this case  one or the other end of  both traces should be most sensitive to moving off the primary  This can be repeated for  other chopper throws and the center values recorded for later use     b  Second Option  adjust collimation midway between the two beams  This is  appropriate for small throw and when the source will be in both beams  It also has the  advantage that it should minimize chopper offset and pattern  Repeat a   except that for    200 MIRAC User   s Manual    one extreme of each adjustment the chopper should be in the on source position and for  the other the off source position  The chopper position can be changed using the IRTF  chopper control in local mode  or by redefining the off source beam in  OBS  Header Observe Nod and Chop Parameters Level of off source  This is normally  Zero  so that level 1 in on source  Changing this should switch the chopper position     2  Out of focus star image  Run the camera chop mode  current display  at 2 2 um tracking a  bright star  Defocus the telescope to give a doughnut image  This should be clear and  symmetrical  Adjust collimation to make it symmetrical  This method is less sensitive and more  ambiguous that method 1  since the appearance depends on
237. off and the sky and telescope background subtraction be carried  out with Nod only  In this case the symmetrical  or four beam  nod can be used with the sequence  of 1 4 time off source  half time on source  and 1 4 time off source  The nod only approach has the  advantage of avoiding image smear due to chopper vibrations  and the disadvantage of excess sky and  detector noise because of the low frequency of telescope nod motion     5 22 99 Al  Principles of Mid IR Observing 105    A1 3 Obtaining a Gain Map    A gain map  is obtained by observing two different levels of flux  generally high flux in the closed  dome and low flux on the sky  This is preferable to using a dark  or blanked off  frame for the low  flux  since for the former case both flux levels traverse the telescope in the same way and any pattern  over the array from telescope emission is the same for both levels and should subtract out  Both flux  levels must be observed with the same filter and frame rate  This is discussed in detail in Chapter 10       1 4 Calibration of IR Images    Flux calibration of the sources is performed by observing IR standard stars  These stars are usually  bright  100  Jy at 10 um  so they require a short integration time to reach the same signal to noise  as the sources of interest  Since changes in sky transmission will compromise the accuracy of the  calibration  the standard stars should be observed as close as possible in time to the source  Usually   observations of a source
238. olumn  output is desired  the Auto functions must be turned off     2000    Scope Display    1500    1000    500        500     1000     1500    Col 10  Col 118        2000     10 20 30      50 60 70      9o 400 140 120 130    Row    DISP  4 05 96 15 16 57 76 Data not saved SIMULATED STAR Mode  Current    Figure 12 1 Scope Utility Display     The scope header values  including camera parameters  are separate from the current observing  header  since the values required for the scope usually are quite different from those used when  observing  They can be edited using the menu selection from the scope display Setup Edit Scope  Header  This is the same header edit menu as is accessible from the OBS command line  except that    94 MIRAC User s Manual    the filters cannot be changed here  only from the OBS  Header command  There is also a command  in the scope display menu to make the scope display header equal to the observe header  This is  useful when wanting to change only a few parameters from the normal observing settings     Since the output level of the columns will likely be similar  an offset can be entered for the second  column displayed  to separate it out from the first  The two columns are also displayed in different  screen colors  If aligning the dichroic  however  an offset of zero is useful  Then the user must  simply try to adjust the mirror so that the output of the two columns are at an equal minimum     If the scope Edit Scope Header Observing Parameters S
239. omatically sent to the camera with the next OBS  RUN command     Initialize Filters  Obs  Header Filters and Optics  Init Filters yes   lt esc gt     This will issue the home command to each of the filter wheels in succession  and turn off the  motor current after the command is complete  Listen or watch to make sure the filter wheels are  turning  If the wheels happen to be in the home position already  the wheels will turn slightly  as it moves away from the home position a small amount  and then returns to home  For  subsequent camera power ups during the run  the Init Filters command is not necessary  since  the filter positions are stored to a file  However  the Init Filters command may be executed at  any time  and should be run if there is any doubt as to the current position of the filters  The  home position is filter wheel 1  8 8 um  filter wheel 2  open     Prepare Chopper drive   Turn on facility chopper electronics  Set direction  normally 0  north    Set throw  normally 10 to 60 arcsec     Set nod throw  usually 20 60 arcsec E W    Request operator to set throw  IRTF and S O  90 Inch    Set throw in Obs  Telescope Telescope Control Nod Beam Control  UKIRT   Set the telescope nod vector is described in Section A14 14     For moving objects  planets   edit catalog  if necessary for changing position from previous day   In menu Obs  Header Source Information  enter object with new position and Put current source  list  From Dos prompt  edit catalog to delete previo
240. ompass directions can be displayed as an option  These  directions  plus the selection of X and Y flips and Transpose  determine the orientation of the data  on the screen and as written to FITS files  Section 12 5      62 MIRAC User s Manual    The statistics for the data being displayed are shown below the grayscale image  The maximum   minimum  average  standard deviation  rms   and number of the unmasked pixels are calculated  all  in ADU  Analog to Digital Units  maximum 2047  minimum  2048   These numbers are for the  portion of the image chosen in DISP  Init Stats Display Region for Stats  generally  Full   excluding  masked pixels     The maximum unmasked value found in the selected region is assumed to belong to the  source  in  the image  The position of the source is determined by calculating the centroid of a small region  surrounding the maximum value pixel  If the fit option is on  the peak  full width half maximum   FWHM   and chi     n 1  of a Gaussian or Moffat fit to the source are calculated  Also the data and  fit are displayed as a radial profile plot in the lower right corner of the screen and the FWHM value  added to the plot at the left      The source sum is calculated as the sum of the values minus the mean background level in all pixels  around the maximum which are closer than N FWHM pixels to the source  where N is the  Inclusion  width factor  entered in the DISP  Init Stats and FIT menu  The average  standard deviation  and  number of pixels are
241. on    Nod Wait off 000000000 Jomerwoit 000000000      Telescope Focus 0000                                             Time Check UT Time MIRAC       W F H  12 13 94 4       Page              Date UT    MIRAC LOG WORKSHEET       W F H  12 13 94 5    MIRAC LOG OBSERVING Date UT     Page          File No Obs  Time Object Wave Frame Int Mode Chop Offset Cmd Sky Obj Air Comments  purpose  chop throw  nod throw     Run UT      um  msec sec G C N Hz File   off  File   cmd    Flux FWHM Mass    noise  sig  focus  sky  temp  humidity  image quality                         130 MIRAC User s Manual    5 22 99   7         mrc2fits Program 131    Appendix 7         mrc2fts Program    The program mrc2fts c converts raw data files from MIRAC format to FITS  The compiled C  program can be obtained from the MIRAC home page on the WWW  Section 2 1   It performs the  same function as the UTIL  Functi Fits File Output command does in the MIRAC PC program  but  the mrc2fts program is a stand alone C program that will run on a Sun workstation and eliminates  the need for a PC to perform the conversion  The individual images in the observation will be  subtracted  1      for data in the chop nod mode   bad pixels can be masked  and    gain map applied     To compile the program  several other files besides mrc2fts c are needed  All of these files plus a  Makefile are included in the software release which is available vi anonymous ftp from  hubble ifa hawaii edu in pub hora mrcreduce  called mrc2fts
242. on file list output to a list          It has taken th                   added the two       The files ataul17   The size of the    filenames in the original    ffsets     the final image  and  final image is  Note that with lcoadproc       This procedure assumes that    to zero     142            User   s Manual    5 22 99 All  Files Necessary for            Program 143    Appendix 11  Files Necessary for MIRAC Program    Files that must be in C MIRAC       LOADDSP BAT  loads dsp program    MIRAC BAT  sets DOS default directory to observing directory and starts MIRAC   PRNTINIT BAT  runs LOADFONT to load gray scale  GRAY 12 SFP  into printer   RTMRUN BAT  installs PC NFS Resident Transport Module needed at IRTF   EGAVGA BGI  graphics driver    SVGA256 BGI   DSP DAT   MOSAIC DAT  weight file for mosaic expansion    PRINTERS DAT  printer definition file for MIRAC program    MIRAC DSP  dsp program    BEAM EXE   INITCOM EXE   LOADFONT EXE  loads softfonts to printers    MIRAC3 EXE  executable program    OFFSET EXE   RTM EXE  real time program necessary for running DPMI programs   RTMREM EXE  removes PC NFS RTM resident program    TCSINFO EXE   MIRAC FIL  saves the current filter positions    GRAYI2 L2D   DPMI16BI OVL  16 bit protected mode driver    GRAY 12 SFP  soft font for HP laserprinter    TELRS232 TFD    Files that should be in C MIRAC  not essential but useful        TMONITOR DAT  temperature sensor calibration    LOADFONT DOC   AIRMASS EXE  used for calculating and print
243. or the LHe transfer       Transfer LN2     Remove the LN2 vent cap from the LN2 fill fitting    Insert LN2  short  funnel  with  valve  rod lightly inserted  into outer fill hole  Fill with  LN2 from 4        flask until LN2 spatters out    Insert valve rod  remove funnel  and return excess to 4        flask   The 2 7 liter LN2  reservoir holds about 3 5 funnels full  Top off should require about 2 5 funnels full    Restore LN2 vent cap to the LN2 fill fitting     Transfer LHe    a   b            4     Remove LHe safety vent cap from the LHe fill fitting    Move LHe storage dewar into position for the transfer  Insert flexible transfer line into  storage dewar to coodown the transfer line  Avoid too high a pressure  Support the  transfer line to that it is about 1 inch above the bottom of the storage dewar to avoid  getting into sludge   The fitting at the top of the storage dewar has a teflon    O    ring  which does not provide enough friction to support the transfer line     When the tip of the transfer line is cold  dripping liquid air   insert slowly into MIRAC  center fill hole  Pause at 7 inch depth for about 10 seconds  first black mark on the fill  tube  in order to fully cool the end of the transfer line to  Then insert another two  inches  second black mark  for the remainder of the transfer  This approach will avoid  blowing out the LHe remaining in the cryostat at the beginning of the fill  The transfer  should take about 5 minutes  When suddenly the plume become
244. ose yes for  verify tape    Move to next menu with F10 key   Choose  Add to Tape   for tape already containing files and  Overwrite  if new tape is  being used   enter     When finished press   esc   to exit the program     A21 3 Backing up Data on a Unix Computer    If the data has been written to a unix computer such as bok at the SO 2 3 m telescope or planck at  the IRTF  it can be backed up to data grade exabyte tapes such as Sony 112M 8 mm tape  cassettes or by 4 mm computer grade DAT tapes  if a DAT drive is available on the Unix  computer  Each Exabyte cassette holds approximately 2 5 GB of data  At the 2 3 m telescope   the exabyte tape drive is the leftmost drive located in the computer cabinet to the left of the  observer s console  At the IRTF  the drive is located at HP in the computer room     The backup routine is the standard unix tape archival procedure   tar   This should be available  on any unix computer     A21 3 1 Basic Unix Tar Commands    In lieu of the predefined macros  the following unix commands can be used  The name of the tape  drive  stl for the IRTF  and device name  rst1  should be marked on the unit  To avoid an  automatic rewind  start the device name with n  nrst1      allocate stl to allocate the tape drive    tar cvf  dev rstl   writes entire current directory and  subdirectories to a tar file on the tape   overwriting any previous information on the  tape     tar xvf  dev rstl  directory name  recovers files from the tar tape  writing the
245. otted with a red dashed line     The fit equations for the Gaussian are     90 MIRAC User s Manual    y  a   bx   cx          FWHM   2 354 6    For the Moffat fit  there is an additional parameter  p  which is set in DISP  Init Stats          X                 a   bx   cx    1   MT  y Yo L ae    Where    11 2 7 4 Value    This command creates a cursor that the user can move over the plot to show the value of pixels on  the display  As the cursor is moved  the location and value are printed in the lower left corner of the  plot  The delete key toggles the cursor fast motion mode  In this mode  the cursor moves 10 screen  pixel steps per keystroke  rather than the default 1 pixel step per key  Pressing any key other than  the arrow or delete key will return control to the top command line     In the 2 D mode  the value displayed is based on the X  Y position of the cursor  In the 1 D mode   the value reported is the Y value based on the current X position  In this mode the Y position of the  cursor is not relevant     11 2 7 5 Level  2 D Contour only     The level command will draw a new contour level on the plot  at the value of the current cursor  position         cursor is positioned in the same way as the Value command  and then when    RETURNe is pressed  the position is selected and the contour drawn     5 22 99 11  Reading Stored Data and Data Processing 91    11 2 7 6 Hardcopy    The Hardcopy option is no longer implemented in MIRAC3  To get a hardcopy of the graphics  
246. ound based telescopes presents many unique problems  The  main difficulties result from the fact that the sky and the telescope emit strongly at these wavelengths   This background is generally 10  to 10   times stronger than the source  In addition  this background  is constantly changing from drifts in the telescope temperature and rapid fluctuations in the sky  emission on time scales as rapid as a few hertz  While these fluctuations are largely correlated over  the field of the array  there is a residual that creates noise in the image  Also  in many arrays  there  is a low frequency current noise  which is uncorrelated from pixel to pixel     To remove the effects of the background emission  separate images of the source and nearby sky are  obtained with beam switching by chopping and nodding the telescope   Rapid beam switching with  a square wave motion of the telescope secondary mirror is done to modulate the source signal at a  frequency of a few hertz  above the frequency of the dominate sky and detector fluctuations   Additional slow beam switching is carried out by moving the telescope  nodding  at a frequency of  a few hundredths of a hertz to remove the effects on the image from the different telescope  collimation in the two chop beams  The beam throw  in both cases  is generally set to the array field  size  or large enough to assure that the off source beams are truly off the source if it is extended or  if there are multiple sources in the field  Typically c
247. ow or column to calculate  the frequency spectrum of the data  assuming each pixel is spaced in time by the pixel time specified  by the camera parameters     11 2 5 Histogram  This mode constructs a histogram of the values in a row  column  or the entire display buffer  and    plots them in a 1 D plot similar to the SLICE mode  The bins are selected as a percentage of the total  range of the image data  This is shown in Figure 11 4     5 22 99 11  Reading Stored Data and Data Processing 87    Opt ions  Setup Redraw Value Hardco Output  EEJ Exit    2000    Npix   15709    1800    1600    1400    1200    1000              600    400    200       Gaussian Fit  Peak   1 897E 3 Xpos 5 0 1697 FWHM   8 0778    Const  1 819 Linear  1 505E 1 Quadr  i  a rm 3 ChiSar  5 370E 3  OBS  4 05 96 15 31 04 c960405a  001 SIMULATED STA IDLE 0 00 0 02 0 5  DISP  4 05 96 15 16 57 76 Data not saved SIMULATED STAR Mode  Current    Figure 11 4 Histogram Display     11 2 6 Radial Plot    The Radial Plot mode is illustrated in Figure 11 5  This plot is similar to the calculation done in the   array  display mode  Figure 9 1   except that the full screen is used and the hardcopy and other  plotting commands are possible  The center of the source is determined by calculating the centroid  for a region near the peak value in the image  and then the distance from the center is calculated for  every point  A small cross is drawn for every data point  and the best fit function drawn through the  points     
248. ple differencing     The methods of loading data are controlled from the DISP  Load menu  For previously saved data   the data is loaded using this menu  For data coming from the current operation  this menu controls  how the image is processed with mask  gain  and flat field matrices before it is displayed     If the program is in the ARRAY display mode  as determined in the DISP  Init menu  then the current  contents of the image display buffer is always shown in the main image display screen  Different  methods of display  such as Contour or Slice  are initiated in the DISP  Begin menu  The mode of  display is selected  and the function is executed from that menu     11 1 Methods of Loading Data    When the DISP  Load Load command is issued  the data is loaded using one of the following  formats  These formats must be selected using the DISP  Load Mode option before the Load  command is used  The default directory for reading data is initially the same as the data file directory  where new images are being saved  However  if a new path is entered for a data file  that directory  becomes the new default directory for reading data     11 1 1 Current Observation    This is the mode most useful when observing  It displays the most recent observation taken  The  automatic masking  gain  and flat field operations can be activated to improve the image  If the  Observation is a combination of images  1      in chop or nod mode   all off source and sky subtractions  are done automa
249. pliers  Tape measure 10 feet  3 meters  Thickness gauge  Caliper inches and cm  Brush with rubber ball   Rouge  sandpaper  Loose parts small plastic container  Small plastic round container  Hardware and electronics  plastic box   Rubber gloves for cryostat disassembly  Coax BNC cable 4 ft   Test leads with banana plug ends  4 long  4 medium  Ziplock bags 1 qt and 1 gal  Alcohol  Propanol 125 ml plastic bottle  Plastic container with cover 118 ml  Battery  spare 4 5 V alkaline for level sensor  Battery  spare 1 5 V AA alkaline for flashlight  2   Battery  spare 9 0 V alkaline for Fluke meters  2   Wire  stranded heavy  Wire  twisted pair 20 feet  Wire  twisted pair 24 feet with banana jacks  Envelop of spare resistors and capacitors  Q tips  Breathing mask  Antistatic envelop CONTINUED    CRATE 8 SUPPORT EQUIPMENT CONTINUED 3 of 4    Loose items small plastic container  Computer supplies plastic box  Spare A D converter  Detector input test circuit  Short ribbon cable  Data command termination cable  BNC cable  Clip leads  BNC Banana adaptors  Candle  Spare cryostat window  Electric carving knife  usually not needed  not packed   Pair of blades for carving knife  usually not needed  not packed   Fluke meter with double banana leads  Magnifying visor  Spare screws  plastic box   Electronics test kit box  Fuses 7 and 5 amp slo blo for power supply  IC clips  6   Short test leads with various pins  Controller board pin test leads  Banana test probes with pointed ends  2   Banana
250. plotting  in the  DISP  Begin menu  The settings for the grayscale autoscaling also control the scaling of the main  image display screen     11 2 2 Contour    This mode will display a contour image of the data in the image display buffer  This is illustrated in  Figure 11 2  The number of levels is set in the contour parameters menu in DISP  BEGIN  and the  contour levels can be chosen manually  or selected by the computer automatically  The automatic  selection evenly spaces the levels between the minimum and maximum values     5 22 99 11  Reading Stored Data and Data Processing 85    Opt ions  Setup Redraw                  Hardco Exit    130  120    110    60  50  40        20    10                 72 59  5  O 40 20 30 40 50 60 70 80 90 100 110 120 130  0 2818  MIRAC2 U of Arizona Smithsonian Ast Obs  OBS  4 05 96 15 26 21 c960405a 001 SIMULATED STAR IDLE 0 00 0 02 0 5  DISP  4 05 96 15 16 57 76 Data not saved SIMULATED STAR Mode  Current    Figure 11 2 Contour Display Mode     Additional levels can be drawn after the plot is complete by using the Level command  The cursor  is positioned to the desired location and a contour level is drawn based on the value at that pixel  location  The position and value of the data is displayed on the screen as one moves the cursor  to  aid in selecting the level     11 2 3 Slice    The SLICE mode displays a 1 D plot along either a row or column of the array  The SLICE mode  is illustrated in Figure 11 3  The direction is always from dat
251. pose and comparing the CVF scan with a Beckman  Acculab Dual Beam Spectrophotometer scan through the same sample  This scan and previous  calibrations are in Supercalc and Microsoft Excel spread sheet files in the MIRAC computer CVF  directory  The most recent calibrations are shown in Figure A3 3     The steps for calibrating the CVF are     1  Source and sample setup  Locate a thermal radiation source  incandescent lamp  about 1 or 2  feet in front of the cryostat window  Using a ring stand and clamp  support a 6 x 6 inch piece of  cardboard mask with a hole smaller than the clear aperture of the Beckman polystyrene sample  about 2 inches from the cryostat window centered on it  With another ring stand and clamp  support  the Beckman polystyrene sample on the radiation source side of the cardboard so that the sample  can easily be slid out without disturbing the cardboard  Have available a third piece of cardboard  to use as a room temperature source     5 22 99 A3  MIRAC Filter Data 117    2  Camera setup    OBS  Next Wavelength CVF 11 75  Integration Time 2   Frame Time 8 4  Chop Nod Mode Grab  Save off  How many Obs per run 2  Read offset file off  Use command file off  Link frame filter off    OBS  Header Filter Precise Step inc5    Run  To confirm that for this frame time the peak flux  at 11 75  without the sample  is within the linear flux level  Change frame time if necessary     OBS  Mode Step CVF on  OBS  Next  Save on  How many Obs per run 200    3  Data taking  
252. r  xv f drive file       7  Printing       7 1  The Printer Queue    List the Queue 1      Removing    Printer Job lprm job  Removing Your Printer Jobs lprm      Selecting a Printer lpr  Pprinter            Pprinter              Pprinter job   7 2  Printing troff Output and Screen Dumps  troff Output 1      t    Screen Dumps screendump    rastrepl    lpr  v    234 MIRAC User s Manual    5 22 99   21  Tape Backup 235    Appendix 21  Tape Backup    A21 1 Backing up Data with NovaTar on MIRAC PC DAT Drive    NovaTar provides a backup tape in Unix Tar format so that it can be read on a Unix computer  with a DAT tape drive  It is most suitable for the data backup  The MIRAC PC contains  convenient batch files for tape handling  WRITE  READ  LIST  REWIND  Executing any of  the first three without parameters provides an explanation  The procedure for using these  commands is given in Section 6 2     Alternatively  it is possible to use the NovaTar menu driven approach as follows     Locate current backup DAT tape  Each DAT tape holds 2 Gbyte  sufficient for all the data  inarun     reasonable approach is to use two tapes  alternating adding the current  and previous nights data to the tape    Add to label current observing date  Insert tape into ALR computer    From DOS prompt   novatar   enter    tape   enter   also will start novatar    Using the down cursor key on the keyboard  choose    Write Tar Tape    enter     Using tab and cursor keys  edit DOS filename to first directory t
253. r gt         enter      7 14 Printing Images    MIRAC images can be printed on a local HP Laserjet or Deskjet printer  or postscript network printer  or to a postscript file  Printing is accomplished by executing PRN  Print Yes or the macro Fl  The  desired printer is selected in PRN  Init and the Mode in PRN  Mode  Printing to a local printer uses  a downloaded grayscale character set  Post script printing uses a postscript gray scale  Printer  Timings are given in Table 7 4  The best approach during observing is to print to a file  in the  observing directory  and when there is time  at the DOS prompt netprint the file from MIRAC to the  network printer     5 22 99    7  Observing Procedures and Check Lists  Table 7 4 Printer Timings   HP Laserjet 13  Postscript to network printer  using LPT2  35  Postscript to MIRAC disk file 4 5  Postscript to mounted facility disk 30  Copy PS file from MIRAC to mounted disk 4  Copy PS file from MIRAC to network printer 45  Net Print PS file from MIRAC 6    seconds    51    52    MIRAC User   s Manual    5 22 99 8  Short Form Instructions 53    8  Short Form Instructions for Running MIRAC Using the MIRAC Program    Created by Sarah Stewart 12 7 95 Revised 11 18 1998   JLH            8 1 General Notes    8 1 1 Getting around in MIRAC   lt esc gt  takes you back to command line  main menu    lt page up gt  take you back up one menu  first letter of menu line will execute that option  otherwise  use  arrow key to select and press  lt enter g
254. rameters     Liquid nitrogen shield temperature  determined by a Lakeshore Cryogenics diode mounted    on the LN2 shield near the reservoir     If the electronics and A D temperatures are out of range  they can be adjusted by increasing or  decreasing the cooling air circulation by removing the electronics side cover plate or by covering  the ventilation holes with cardboard  The cardboard covering the board access inside the  electronics enclosure should always be in place to insure proper flow of cooling air     The temperature controller normally comes on when the camera power switch is turned on   regulating the array at the temperature set by the multiturn potentiometer at the controller  The  dial temperature calibration is given in Table A14 3     Table A14 3 Temperature Controller Dial    Dial    35   78   125  151  181  212  277  344  411  478  543    Temp    4 0  4 4  4 8  5 02  5 30  5 5  6  6 5  7 0  7 5  8 0    Dial      605    663    718    770    819    864    908    949    988    1025    Temp    8 5   9 0   9 5   10 0  10 5  11 0  11 5  12 0  12 5  13 0    The controller modes of operation are determined by two toggle switches     Switch 1  Local    The temperature controller operates whenever the temperature  monitor power switch is on     Remote The temperature controller operates only when the camera power switch is    on     Switch 2    Manual        dial determines directly the voltage going to the detector stage heater   Auto The dial determines the temp
255. rash  it tries to save the current parameters into  CRASH HDR     Within each directory  there can be several copies of different header files  used for different tasks   For example  one could have a file that stores the parameters to use for observing with the broad band  filters  and another header file with parameters to use for observing with the CVF  Parameters from  past observing runs can be kept  for quick reference     60 MIRAC User s Manual    The data files are normally stored in the disk drives D  and G  using subdirectory names such as  D960405     9 3 Data File Name Conventions    The camera images can be saved to disk and or displayed to the default screen  All images saved to  disk are written to files with a name derived by the PC  in a format that includes the current date and  picture number  The first letter in the file name is a  C   followed by the last two digits of the year   then the month and day  followed by an index letter  for a total of 8 characters  The file extension  is composed of the image number  which runs from 000 999  For example  the 5th image taken on  the night of August 23  1991 would be saved to the following file   C910823A 005   After  reaching the 999th file  the index letter A would change to B  and the 1000th file would be   C910823B 000      When reading files  the directory in the OBS  Init Save Directory and the current date are assumed  unless a path and file name with a different date are entered           the directory a
256. rce and obtain  several observations of blank sky at the same integration and frame time as for the source  observations  The flat field can also be constructed from the off source images from several chop  or chop nod observations  In either case  the average of these observations should be saved in the    5 22 99 10  Mask  Gain  and Flat Field Maps 77    observing directory to    file with a name that identifies the wavelength and date  such as O 1171008 FLT     10 4 Using the Mask  Gain  and Flat Field maps    The user can choose to automatically use the Mask  Gain  and Flat Field maps when displaying data   The data written to disk from the camera is always directly from the camera  using these automatic  files only changes how the data is displayed     To have the program use Mask  Gain  and Flat maps  turn on the appropriate item in the  DISP  Load Auto menu and enter the desired file name    10 5 Principles of Mid Infrared Flat Fielding    Flat fielding with a mid infrared camera is straight forward in concept and theory  although  sometimes difficult in practice  It is different from flat fielding in the near infrared and also is  sometimes confused by imprecise or differing uses of vocabulary     Each image has what can be called zero flux pattern noise  that is the image obtained by observing  with zero flux on the array with the same camera settings as are used for imaging  namely on chip  integration time  which we call frame time   readout speed  number of A D sa
257. rd Stars with Magnitudes in Alphabetical Order    3 8    0 2   0 71   1 86   3 12   3 15     1 43   1 4    1 36   0 68   3 73   1 3    1 36     4 5   4 2   3   3 05     2 05   2 02     1 2   1 22     2 45   2 47     1 6   1 7   0 76     3 33   1 4   3 5  1 75   2 3   0 95   1 46    4 8    0 2   0 6   1 92   2 96   2 93     1 44   1 36   1 36   0 68   3 4   1 16   1 12   0   0   4 16   3 9   2 8   2 77     1 8   1 78     1 12   1 09     2 2   2 2     1 3   1 4   0 62     3 05   1 2   4 4  1 41   2 1   0 7   1 4    Wavelength  um    Magnitudes    7 9    0   0 78   1 9   3 08     1 45   1 37     0 68   3 8   1 24     4 75   4 4   2 95     2     1 22     2 45     1 5   1 57   0 7     3 14   1 3   72  1 65   2 7   0 87   1 6    8 8    0   0 78   1 9   3 16   3 12   3 14   1 45   1 38   1 35   0 68   3 85   1 24   1 25   0   0   4 75   4 4   2 98   2 95   2 97   2   1 96   1 98   1 22   1 21   1 23   2 45   2 37   2 44   1 5   1 61   0 7   0 73   3 36   1 3   7 2   1 65   3 3   0 93   1 6    9 8    0   0 75   1 9   3 13     3 18   1 5   1 39     0 7   3 88   1 31    0     5 1   4 5   3     3 06   2 05     2 07   1 19     1 24   2 51     2 5   1 73   1 7   0 78   0 8   3 37   1 44   7 6  1 73   4 2   0 95   1 6    10 3    0   0 75   1 9   3 15     3 19   1 5   1 39     0 7   3 93   1 3    0     5 2   4 5   3 01     3 08   2 07     2 1   1 19     1 25   2 51     2 53   1 72   1 7   0 78   0 82   3 38   1 45   7 6  1 74   4 3   0 96   1 6    N     3 14     1 35     1 31     3 02     2
258. ript    time is anumber up to 4 digits  script is the  name of a file containing the command line s        to perform   5  Users  Seeing Who Is Logged In who    5 22 99       Changing Identities su  username   Seeing Your User Name whoami  who ami  who is this  6  Managing Files  6 1  Looking Up Files  Standard Commands whereis filename    Aliases and Commands  Describe Command    Searching Out Files    which command    whatis filename    find dir  name name  print    dir is a directory name within which to search   name is a filename to search for     62 Tracking Changes    Comparing Files    diff leftfile rightfile    diff prefixes a left angle bracket   lt   to  selected lines from leftfile and a right angle bracket   gt      to lines from rightfile   Auditing Changes    Putting Files Under sccs    Checking Files Out  Checking Files In   Backing Files Out  Recovering Current Versions  Reviewing Pending Changes  6 3  Automating Tasks    Create a Makefile    mkdir SCCS   chmod 775 SCCS  sccs create filename     rm      sccs edit filename     sccs delget filename     sccs unedit filename       sccs get SCCS    sccs diffs filename       vi Makefile    A makefile consists of macro definitions and    targets   Test Makefile    Run make    make  n  target     make  target     A20  VMS  DOS  UNIX Command Reference 233    6 4  Managing Disk Usage    Seeing Disk Usage df  du  s   du   sort  r  n   Ls   l   Making A Tape Archive tar  cv f drive file       Extracting Archived Files ta
259. rol of the Telescope    Another method of control is to send the telescope control computer direct commands via an RS 232  link  Drivers have been implemented for the 2 3 m SO and UKIRT telescope control systems  This  is the preferred method  since it allows other commands besides the nod to be sent  The connection    5 22 99 9  Using                 Program 73    necessary to use this method is      RS 232 cable from the COM port of the      to the telescope  computer input in the control room  A special cable has been made for this purpose  to interface  correctly between the RS 232 port on the PC controlled by the MIRAC program to the telescope  computer input     For the nod beam control  the wobble vector must be input before the command is sent  This  generally must be done once at the beginning of the night  Then the current position must be defined  as beam 1  When the Beam2 command is sent  by the MIRAC computer or the Wobble box   the  telescope computer will command the telescope to move to the current position plus the wobble  vector  Then when the Beam  command is sent  the telescope is moved to the current position minus  the wobble vector  In this way  the telescope alternates between the beam 1 and beam 2 positions   Note that the positioning is not absolute  so that if two  Beam 2  commands are issued  the telescope  will offset twice as far as the  Beam 2  position     Using the RS 232 commands gives the user additional command options  Telescope parameters
260. round wire  12 feet blue   UKIRT   Nylon cord plastic container  Kim wipes small box  LN  flask 4 liter  white   Ethafoam spacer  LN  and LHe insulating foam vent tubes  Electronics box and cryostat sled  Ethafoam   Velcro cable straps board with 2 long  7 medium  3 short with buckles    CRATE 4  POWER SUPPLY  Gray Duct Tape 12  26  21   81 Ibs 05 22 99     Camera electronics power supply  in plastic bag     CRATE 5  COMPUTER  Yellow Fiberglass 28x28x16h 107 Ibs 05 22 99     Analog digital I O interface  Mouse  Plustec PC computer  in plastic bag   with attached BNC cable and optical fiber cable  Keyboard  in plastic bag   AC power strip for computer  4 feet with 4 foot extension  Do not disconnect extension   Computer power AC cord  Monitor power AC cord  Ethernet cable 15 feet RTF  or 4 feet  S O  2 3 m   usually not needed  not packed   Ribbon cable 50 pin for A D Digital I O  5 5 feet  Blank DAT tapes  box of 4   Blank 3 5 inch floppy disks  box of 6   Backup 3 1 2 inch floppy disks  System boot disk  root  util  batch directories  DAT programs  Dos directory  3 disks  parts 1  2  3  NFS directory  MIRAC program and observe directories  Jupiter Tracker II Galsat 52  Filter motor controller test programs  Computer assembly tools and parts plastic parts box  Sharpie colored  amp  black pens  fine and extra fine points  Grease pencil  Magic marker  Screwdriver 1 8 blade  Phillips screwdriver 1 8 blade  Razor blades  2   Pen light  Scotch magic tape  Elastic bands  End covers
261. rray 1  0 3  3  C  Init  ROW subarray 1  0 3  0 A   71 gus  D  End ROW subarray 1  0 3  3 B  1 43 ps      Bandwidth  Time Constant   71 ps Go 52286418      Detector Bias 2 000 Dis  4071  us      Reorder data into image On     11 5 ps  H  Offset Values   gt      22 7 ps      Frame time filter links   gt  G  90 9 ps  J  Skip bad images in DSP On H  14 ms                  Offset                                   Frame time filter 1                A  Low flux offset 1572 00  Read Frame times file Sky frm  B  Medium flux offset 3368 00 Save Frame times fil Sky frm  C  High flux offset 6058 00 Edit filter frame times  D  Variable offset 0 00 CVF frame time values  E  Fixed Linear Max 5180 00 Jj  F  High Dark 660 00  G  Full Well 7508 00  p   Edit Frame time values  msec       A  2 2    16   140 00      3 8L  16   140 00      4 8    16   70 00  D  7 9      4   39 00      8 8  10   35200      9 8  10   20 00  G  10 3  10   20 00      10 6N  8 1   13 1 pm  6 60  I  11 7  10   20 00  J  12 5  10   22 00  K  17 400  2 6   31 00      17 801  2 6   31 00      18 005  10   9 00      20 603  6 8   15 00                      5 22 99                                                                              12 1  OBS  Command Line Menus                                                                                  and Site    Mauna Kea  IRTF  1 870  19 8261  155 4708                         r Edit CVF Wavelengths and fry    ror TA           Telesco  A  Wlth  7 600 39 00   E  B  With  8 00
262. rray single read rms read noise  preamp input 27 digital units  082 mV  array input 853 electrons    Array electron gain times dispersion  DG  1 96    Array saturation level 2 29 Volts  2 36x10    electrons  7400 digital units    Linear range 1 65  107 electrons  5170 digital units  Array background for  BLIP noise   3 x  read  3 4x10   electrons    1065 digital units    5 23 99 2  Overview        Performance 9    2 6 Background  Sensitivity         Noise    The sensitivity and integration times for the MIRAC3 set of filters on a variety of telescopes can be  obtained from the MIRAC home page  Section 2 1   Electronics and Computer  MIRAC3 sensitivity  calculator     The sensitivity and noise of MIRAC3 is determined from observation of standard stars and blank sky   Several chop nod sets are taken with the standard star at different positions on the array  These  images are mosaiced with offsets determined by centroiding         star signal in digital units is  calculated as the  sum of the source  for all pixels above a noise threshold  The background noise  is given by the standard deviation over the array of chop nod sets taken off the source  The  measurements agree closely with the sensitivity and noise determined by calculation from the  detector  camera  filter  telescope  and sky properties  The total background is the flux entering the  camera from any source  The sensitivity for the IRTF 3 m is given in Table 2 4  The surface  brightness sensitivity is given first s
263. rrect  The user is  prompted for the RA  DEC  EPOCH  and observatory    r nl n2 specifies a range of images    1   2  to be processed with one command  With this  option is necessary to only to give the  root  name of the file on the command line   The file numbers are appended to this     Example   Files 1950709   455 to   532 taken on July 9  1995 are to be corrected with a factor of 0 2     The following command is used     aircor  950709    0 2  r 455 532    5 22 99   9  MIRAC Image        Header File Format 135    Appendix 9  MIRAC Image and Header File Format    A MIRAC format observation file consists of a header of 32768 bytes and an image of 128 x 128 4   byte integers for each of the observation sky subtraction beams  Thus the file size for a grab  chop   and chop nod observation are 98304  163840  and 294912 bytes  respectively  The data are ordered  by image column     The header has a flexible format which allows easy additions or deletions  The following is an  example of a header from November 15  1998 given in FITS format                                                     SIMPLE   T   DATA IS IN FITS FORMAT   BLIPLX     32   BITS PER PIXEL   lt 0  REAL    NAXIS   2   NUMBER OF AXES   NAXIS1   128   PIXELS ON 1ST MOST VARYING AXIS  NAXIS2   128   PIXELS ON 2ND MOST VARYING AXIS  BSCALE   1 000000000000e 00   VALUE  DATA BSCALE BZERO   BZERO   0 000000000000e 00                                                                                                     
264. rs   Shut down camera and MIRAC program  Turn off Camera Power and Temperature Monitor switches   Quit MIRAC program with    Quit Yes    Copy log to data directories  e g     36    5     MIRAC User s Manual    From DOS prompt for current observing directory  e g  o  irtf1295  copy 12 02 95 log d  d951202   enter    copy 12 02 95 log 134951202   enter      Initiate MIRAC DAT NovaTar tape backup    NovaTar provides a backup tape in Unix Tar format so that it can be read on a Unix computer with  a DAT tape drive  It is most suitable for the data backup  Instructions for an alternative backup  using NovaBack are given in Appendix 21     The standard backup procedure is to maintain two backup tapes  Tape A and Tape B  alternating  them each night backing up both the previous nights and current nights data files  Each DAT tape  holds 2 Gbyte  sufficient for all the data in a run  Label the tapes with MIRAC  Telescope and  Run dates  and Tape A  or B     The PC contains convenient batch files for tape handling  WRITE  READ  LIST  REWIND   Executing any of the first three without parameters provides an explanation     6     7     8   9     10     11     Locate appropriate tape           A or B  Add to the box label the names of the last and current  nights directories   Insert tape into ALR computer    From DOS prompt  for example   write 4 d  d960415 d  d960416    The number  4  in this example is the number of tar files  data directories  to skip before writing  the new ones  It is
265. ry host computer  bok  planck  etc   The time  zone for the clock  UT  local  is selected in an NFS setup menu and is set automatically by  TIMES  UT must be used for the observations  This is necessary for the proper calculation of  airmass for the observations  It also insures that the data files will all have the same date for a  single night of observing     Create an observing directory for the run in the O  drive  It should be designated by the  telescope  month  and year  e g         enter    6     7   8     9     5 22 99 5  Start and End of Run Setup and Shutdown Check Lists 23    mkdir o  irtf0696   enter     As a start  copy all files needed from O  OBSDIR or the previous run   s observing directory into  the new         These will include header  mask  gain  flatfield  macro  command  frametime  plot  parameter  log  offset  and object catalog files  Old log and other files specific to the run can be  deleted from the new directory  A complete list of the required files is given in Appendix 11   The new observing directory is the directory from which MIRAC will be run     Edit the MIRAC BAT file in the C  MIRAC directory to set the new observing directory name   selected in item 2   as CURDIR  to set the network real time interface RTMSTAT on for IRTF   off for other telescopes  and to set PRNTON to on if there is a printer attached directly to the  PC  and off if there is not   Use the DOS command EDIT MIRAC BAT      The RTM program is the  Resident Transport Modu
266. s    5 22 99   20  VMS  DOS  UNIX Command Reference 229  simple  One filename or directory 4  Editing Files  name to access local file or  directory  Type vi to enter text editor  then any of following  absolute  List of directory names from root commands  in command mode  unless preceded by a  directory  first    to desired filename or      directory name  each name separated by        to add text  relative  List of directory names from cc to substitute a line with a string  enters insert  current position to desired mode     filename or directory naem   each name separated by       2 12  Directory Abbreviation     Home directory      username Another user s home directory   Working directory    Parent of working directory    3  Commands   31  Date and Time    Type date  For universal time  Greenwich Mean  Time   type date  u     3 2  Calendar   Type   cal year for yearly calendar   cal month number year for monthly calendar   3 3  Wild Cards     Single character wild card      Arbitrary number of characters    3 4  Redirecting Output   System types output of command to file rather than  screen  replacing current contents of file  if any  Type  command name    filename    System types output of command to file rather than  screen  appending to current contents of file  if any   Type command name  gt  gt  filename    3 5  Basic Calculator   Type bc to enter interactive program  Type  arithmetic expressions  using          and   symbols     followed by RETURN  To change number
267. s  05 22 99     Camera electronics box with attached filter controller with foam support  cryostat temperature sensor heater cable  4 feet   inside electronics box   signal input test connector  connected to signal input inside box at top    Filter home switch cable   Filter motor drive cable   Digital bias cable with filter capacitor box  3 feet    Filter controller AC cord   Cryogenics Kit  Tygon tubing 3 8  ID 3  long  LN  extraction fitting  Copper 1 4  diameter 14  long for warming cryostat  LHe slitted vent tube     Bunsen      spare  Cryogenic level sensor  LHe supply dewar O ring fittings  2    Tygon tubing 1 2  ID 34  long w  coil spring for LN  removal  Tygon tubing 1 4  ID 89  long   Tygon tubing 1 4  ID 60  long   Tygon tubing 1 2  ID 24  long   Tygon tubing 1 2  ID 18  long   Tygon tubing 1 2  ID 6  long   Soft rubber surgical tubing   LN  funnel  long  with tube protecting rod   LN  FUNNEL  short  with tube protecting rod  Tygon tubing 1 2  ID 38  long   Bladder for LHe transfer with 3 8  ID tubing 6  long  Cryogenic gloves  pair    Safety goggles    CRATE 3  CABLES  Yellow Fiberglass 18x34x22h 163 165 05 22 99     Cable bundle  120 feet   Connector protective sheaths both ends  Power with dummy protective connectors on each end  Temperature monitor  Filter controller RS232  AC Power for filter controller power supply  100 feet at control room end    Camera end goes in first with 8 feet free  wrapped around outside of crate   Filter controller AC cord 10 feet  G
268. s  etc  These factors could lead to an over   or underestimate of the PSF  depending on the conditions  For example  if the telescope drifts  significantly during a 2 minute total elapsed time integration on the source but drifts very little during  a 10 second integration of the standard  the effective PSF width of the camera for the source will be  much higher than the star observations show  On the other hand  if 40 integrations are taken on  source  but only 5 standard star observations are taken because of the high S N on the bright star   then the shape of the stellar profile will not be as well sampled as the source     Usually the sources of interest are fairly faint  and one wants to maximize the integration time spent  on these  and minimize time necessary for calibration  We have found that a good compromise is to  take 15 20 fairly short  around 5 sec  on source exposures of the standard star before and after taking  no more than 30 to 40 30 second on source observations of the source  If more source observations    106 MIRAC User s Manual    are needed  this is repeated as many times as necessary  observing the standard star between each set  of source observations  This sequence must be repeated for every filter and or CVF position used     45 22 99   2  Standard IR Stars 107    Appendix 2 Standard Mid IR Stars    A2 1 Standard Star Tables    The following tables give a selected list of  standard  mid IR calibration stars  The tables include  some stars which ar
269. s have the advantage they make the measurement at the same flux level as the  astronomical observations  hence are not so sensitive to array non linearity  But they suffer from  small signal and great sensitivity to changing sky conditions  It is even possible to get negative gain  map elements with those methods  Also  they can be affected by changing flexure between the  telescope and the camera optics and array with changing telescope orientation     The third method gives large signal to noise in the difference  is least sensitive to sky vagaries  and  is most reliable  However  care must be taken to chose the frame time so the dome flux is within the  linear range of the array and is similar to the level the array is operated at during astronomical  observations  This will be shorter that the frame time used for the astronomical observations because  of the higher flux from the closed dome  With burst mode readout of the camera  where the readout  is a fixed time and the frame time is determined by a delay between readouts  this difference in frame  time has little effect on the gain properties of the array  This is not likely to be the case for continues  readout  for which the frame time is changed by changing the read time  The linear range is not  in  general the same as the A D range  For the Rockwell HF 16  the linear range goes from the zero flux  level to about  69 of full well     In any case  it is essential that the zero flux pattern noise be the same for both
270. s in the DISP  Init menu allow selecting the orientation of the image display and the  direction marker  the type of monitor and turning on or off the Magnified and FWHM displays  The  most useful display selections are Heat SVGA and Default VGA  Force B amp W on  The monitor must  be in Default VGA  Force B W off to print graphics screens with the PrntScrn key or with Word  Perfect Grab     The image can be displayed with binned pixels by setting Factor for VGA Bin greater than 1  Arcsec  Grid Display permits turning on an arcsec grid image overlay and selection the spacing and color of  the grid     9 7 Setting Camera Parameters and Taking Data  The camera parameters are set in either OBS  Next or OBS  Header Observe  Filter  or Hardware     The most frequently changed parameters  such as the frame time and filters are gathered together in  OBS  Next  The parameters effecting the camera electronics timing are not immediately sent to the    5 22 99 9  Using                 Program 67     camera in order to avoid changes while images are being obtained  They are sent either when  Camera Init is executed or  if Camera Init has not been executed  at the next Run command  In the  latter case  the camera will pause before starting the observation     Data taking is initiated by executing OBS  Run  This can be done in simulate mode without the  camera  OBS  Init Simulate on   or with the simulator off and the camera attached and running  Save  can be on or off  Log should always b
271. s of objects for offset and airmass calculations  The catalog files are used by the program   AIRMASS  to generate lists of airmasses for objects  OBSLIST can also create a text file  e g   PN1292 TXT  for printing out the catalog  The MIRAC directory contains the WordPerfect file   CATALOG WPW  to format this text file for a HP Laser printer     The following information is stored for each object  the RA and DEC  the proper motion in RA and  Dec  the object type  and the object name  It is best to use all capital letters in order not to confuse  other programs that read the data from these files  We have used the TYPE field for storing a 3  letter code for the type of object  This is compatible with the Steward Observatory telescope  software and old  pre  5 89  versions of the CATALOG program by Dave Harvey  Newer versions  of the CATALOG program use the TYPE field for magnitude  so if one desires to use this program   one must generate a special file using the  t option described below     The following types have been defined     STD   Standard Star QSO   Quasi Stellar Object  SAO   SAO catalog star HII        Region   PN   Planetary nebula DSH   Dust shell  around star   PPN   ProtoPlanetary nebulaAGN   Active galaxy nucleus  SFR   Star forming region YSO   Young stellar object  GAL   Galaxy SBG   StarBurst Galaxy  MCD   Molecular Cloud    Currently  only the STD and SAO types are recognized by the program  All others are regarded as   Targets      The output is sent to 
272. s the dome images  Also take one set of image at each frame time in the  blank wavelength position  Wait a minute after each filter change  The procedures for Mask  Gain   and Flat Maps are discussed in detail in Chapter 10     7 3    Wavelengths  Frame Times  Frame Filter Link Files and Filter Change Times    It is most efficient to select filter sequences which minimize the filter change times  These   depend on whether one or both filter wheels must be changed and the amount of motion for each   The wheel for each filter is indicated in the OBS  Next Wavelength menu  The filter change times  are given in Table 7 2     5 22 99 7  Observing Procedures and Check Lists 41    Table 7 1              IRTF Typical Frame Times  msec     Wavelength Wheel Sky Dome  2 2 2 70 70  3 8 2 70 70  4 8 2 70 60  7 9 1 50 35  8 8 1 35 6 6  9 8 1 20 4 4  10 3 1 20 4 4  10 6N 1 6 6 1 1  11 7 1 20 4 4  12 5 1 20 4 4  17 4 2 39 20  17 8 2 31 20  18 2 4 4 2 2  20 6 1 8 7 6 6         8 8 1 70 20        10 1 70 20  CVF 13 5 1 35 20  Blank 2    Measurement settings  Magnification  5     2 3 m  33  pixel  43    IRTF  41  pixel  34     UKIRT  41  pixel  27    MMT   56  pixel  27   Bandwidth   71 usec  Burst Mode    Read time  2 2 msec  The frame times are chosen for  background within linear range and noise background shot  noise     Nominal frame times for keeping the sky flux within the linear range for the filters are given in  Table 7 1  These are chosen so that the  sky flux  is less than the  max 
273. s to be nonlinear  The frame time  should be chosen so that the sky flux plus the data  or fit  max  for chop or chop nod  is less than  this value  The frame time and the level of flux should be chosen so that the outofrange pixels   hi low  should be  0 0      FrameErrors is the number of chop cycles in the observation found to have one or more data  transmission errors  and dropped from the observation if OBS  Header Hardware Skip Bad Images  is on  When each data word is loaded into a FIFO memory to be transmitted from the camera to the  DSP in the MIRAC computer  the three lowest order bits are duplicated into three high order    5 22 99 9  Using                 Program 63    positions not required for the data  The DSP compares these for each data word and rejects the  current chop pair if an error is detected     The sky linear max is calculated by             sky   l x  fixed               dark    1    4                    rounded to three significant figures   where  Sky   sky linear max  spread   FWHM of the responsivity relative to the mean   15   fixed   fixed linear max where the array starts to become nonlinear  5180   frame   selected frame time    dark   value for the dark current for the 10th highest pixel  x y  integrated over 17 5 msec frame  time  660      For a frame time of 8 7 msec  the sky linear max is 4580  For 17 5 msec it is 4260  for 35 msec  3640  for 70 msec 2400  and for 131 msec 220  Hence  for this array  131 msec is the longest frame  time t
274. s very strong  release the  storage dewar pressure  remove the transfer line  and close the storage dewar top valve   Restore the LHe safety vent cap to the LHe fill fitting  The LHe safety cap should be on  the LHe vent at all times except during transfer to prevent air entering the LHe fill  line causing an air ice plug     Replace MIRAC on telescope    204 MIRAC User s Manual    a  Position cart with MIRAC next to guider box  The clamping screws should be fully  withdrawn   b  Raise cart so that ball on mounting plate is just above cradle  Push MIRAC and slide  slowly into place so that ball is over cradle and tongue is in slot   c  Gently lower table until ball seats in cradle and mounting plate screws are alined with their  holes  Screw in mounting screws and tighten with allen wrench   6  Stow the cart     5 22 99   16  Checking and Trouble Shooting 205    Appendix 16  Checking and Trouble Shooting    A16 1 Software or Digital Logic Lockup in PC  DSP  or Camera    A possible  although rare  occurrence is a digital or software lockup in the camera or digital signal  processor  In the former case  imaging should be aborted  the camera power supply cycled off  and on  and the system reinitialized  In the latter case  the PC power should be cycled     A digital lockup in the PC can prevent the monitor from displaying  If this happens  it is necessary  to cycle the power on the PC  using the switch at the back or the power plug   leaving if off for  several minutes     A16 2
275. scope    4  Disconnect cables from control room at camera    5  Disconnect signal and clock cables at cryostat and put conduction caps on cryostat  connectors     13  Depart  Turn off dome  most of control room  and corridor lights   Lock door   Exit     38    MIRAC User s Manual    5 22 99 7  Observing Procedures and Check Lists 39    7  Observing Procedures and Check Lists    7 1 Check List for each Set of Observations    Most Mirac operations during observing can be carried out from the OBS  Next menu  For each set  of observations check the items in this menu    1     5     6     7   8   9     Object Name  Names in the Source Catalog  OBS  Header Source Information List of sources  will  automatically enter the RA and Dec from the Source Catalog  These are used for the  Air Mass calculation and go into the image file headers  Non catalog entries  Sky   Dome  will give a message  not in catalog  The positions of objects not in catalog  such  as planets or comets  can be entered in current epoch in the Source information menu  and  if desired  added to the Source Catalog  If there are multiple entries with the same  object name  only the first will be used for positions    Wavelength   Integration time   Level of flux  set in OBS  Header   Normally medium  Set to low for low flux  2 2 um   blank measurements  or sky observations with dome frame times   Use display out of   range number of pixels as a guide    Chop frequency  set in OBS  Header   This should be set to the de
276. screen  one can use the GRAB COM program or some other TSR program to save a copy of the  screen to disk in some standard format  then later print it out  The other option is to hit Shift PrtScr  to do a graphics dump to the printer  GRAPHICS COM  which is required for this  is normally  loaded when the computer is booted  The monitor must be in Default VGA mode for a graphics  print     11 2 7 7 Output  1 D     The Output function allows the user to write an ASCII file containing the X and Y data that is  currently being plotted  The data are written in exponential format  in two columns separated by a  comma  These files can then be imported into other programs  such as SuperCalc5 or other  spreadsheet programs  for further analysis and display     92    MIRAC User s Manual    5 22 99 12  Utilities 93    12  Utilities    The MIRAC utility functions are grouped in a separate command line directory UTIL   Several of  the available options are discussed below     12 1 Scope Display    The main purpose of this display is to provide a rapid refresh   analog  display of the output from the  camera  It can be useful when aligning the dichroic at the beginning of the run  The data are  displayed in a line plot  with up to 2 columns displayed at once  This is illustrated in Figure 12 1   The Scope display is a real time data display mode  and images are not saved to disk  even if  Save  All  is turned on  The gain  mask  and flat field functions  however  do apply  so if the  raw  c
277. ses for the standard stars in the sources cat file for  March 13  1993  on Mauna Kea  with 3 columns per page    airmass sources cat 12 24 1992  r 23 11  t    sources ams    this outputs to the file sources ams the airmass listings for the targets  for the UT range  23 hours to 11 hours on Dec  24 25  1992  at Kitt Peak    This program was written in C for a PC  based on the Fortran program SHOWAIR FOR  It was later  modified to compile on a SUN  To compile this program on a PC using Microsoft C compiler version  5    use the following statement     cpl  F 9000 airmass c  On a Sun  use the following command        airmass c  lm  o airmass    The size of the arrays set in the program below can be changed to increase the number of sources  allowed using the parameter MAXSRC in the program  In the case of the PC  the stack size may also  have to be increased  the  F parameter above   For other systems  some tweaking may be necessary   but the program uses fairly standard C  so it should not be a big problem     5 22 99          Manual Log 125    Appendix 6  Manual Log    It is important that all sheets be numbered sequentially for the entire run  The cryostat sheets should  be kept together at the beginning and numbered alphabetically  e g  1    1b  1c     The first few pages  of the log are likely to be Cryogenics la  1b      Worksheet 2  Setup 3  Worksheet 4  Observing 5     There should be a new setup sheet for each night of the run  The log sheets can be photo copied  double
278. sformation from pixel  to sky offsets depends on the telescope plate scale  the camera magnification  the object being  Observed  since the R A  offsets must be put in seconds of time for the Steward telescopes   and the  data array flips and directions defined in the DISP  Init Options menu  Therefore  when commanding  telescope offsets  it is important to display the direction indicator on the default screen and to insure  that it indicates the proper direction of the data array     The program can be directed to ask the user for offsets  The selection is in the OBS  Mode menu   When this flag is set  whenever the OBS  RUN command is entered  the offsets menu automatically  pops up to ask the user for the desired offsets  When exiting the menu  the observation is started   If the offsets were changed  the offset command is sent to the telescope  otherwise the integration  is started without offsetting     A sequence for an observation could be as follows  the user hits OBS  Run and the program asks for  offsets  Offsets are entered and the offset menu exited  The program looks at the offsets entered   and decides whether any offsets need to be sent to the telescope  If necessary  the program encodes  the offset values and sends the commands to the telescope to set the offset values  Then the  command to move to the current position plus offsets is sent to the telescope  The program then  waits for a specified time for the command to be executed and the telescope to stabiliz
279. short   Allen ball L wrench  050 long   Allen ball driver  050   Allen L wrench  032   Cardboard optics baffle cover   cardboard detector cover   Dentists mirror   Detector shorting plugs  2    Shrink tube for gaseous nitrogen cleaning   Soft brush small   Brush 1 inch   Toothpicks  Filter wheel disassembly parts box   wheel 1  2  and 3 diagrams   Empty compartments with tissue for filters   Cardboard masks for filter protection   Copper rings 3 8 and 5 8 spares  Electronics parts box  1  MMM Super77 Adhesive for foam  usually not needed  not packed   Electronics tools and supplies  plastic box    Elco crimp tool   Cannon crimp tool   Solder sucker   Elco pins   Cannon pins small   Copper solder wicking wire   Shrink tubing  short piece   Wire wrap wire assorted colors   Lengths of wire  4 pieces    Wire stripper and screw cutter   Elco extraction tool   Cannon extraction tool   Cannon insertion tool   Wire wrap tool   IC removal tool   Wire stripper  large   Electrical tape   CONTINUED    CRATE 8 SUPPORT EQUIPMENT CONTINUED 2 of 4    Mechanical tools  plastic box   Tin snips  Allen ball handle wrench 3 16  Allen ball handle wrench 5 32 long  Allen ball handle wrench 9 64  Screwdriver 1 8 blade  1   Screwdriver 1 4 blade  Screwdriver Phillips small  Screwdriver Phillips medium  Jeweler   s screwdriver 1 16 inch  Round file  Crescent wrench No  6  missing   Allen wrench L set  050 to 5 16  Scissors  Sharp nosed pliers  2   Wire cutters  2   Exacto knife and blades  Automobile 
280. should be the same for the entire night  and similar from  night to night  Rapid changes in atmospheric conditions such as changes in humidity will affect the  extinction and may make more frequent monitoring necessary  Also  the extinction is dependent on  the wavelength  so the value must be determined for each filter used     The extinction value is determined from observations of an object at two different airmasses  Usually  observations of a standard star are used since the S N is high and one frequently observes the star at  different airmasses during the normal course of observations  The determination of the extinction  is more accurate if there is a large difference in airmass  for example  from 1 0 to 2 0   and it is  usually a good idea to average the results from several stars  The extinction value is given by the  following relation     2 3  d             log C C        og C  C      8 1     where        ADU of source at low airmass         ADU of source at high airmass  A    Low airmass value  A    High airmass value    Once the extinction value is decided on  the aircor program can be used to correct the data for  atmospheric extinction  This program reads in FITS data files  and applies the correction based on  the airmass value in the header and the supplied extinction value  For an observation at airmass A   the corrected value P  is calculated from the observed value P  using the following relation     e A 1             10 22    8 2        134 MIRAC User s 
281. sired value  which is  stored in the program  The actual chop frequency is calculated to be the closest to the  desired value for each selected frame time    Frame time  This is set so that the sky flux is nearly as great  but not greater than  the LinMax  shown on the display and no high out of range pixels  A table of wavelengths with  frame times for both sky and dome is provided in Section 7 3  When Link Frame Filter  is       the frame time is automatically set for the selected filter according to the selected    frm file    Chop Nod mode   Save on off   How many observations per run  This is the number per offset position  typically 2  For non saved observations  such  as finding a star or focusing  this can be set high  e g  50 or 1000      10  Read offset file on off  name of file ifon Offset files are described in Section 7 6   11  Use command fileon off  name of file if on  Command files are described in Section 7 5     The time taken for various filter changes is given in Section 7 3     12  Link Frame Filter on off  name of file if on  Frame files are discussed in Section 7 3   13  Zero current position  to make sure that offsets run correctly    14  Check chop and nod throw  Sections   14 12 and   14 14      40    7 2    1     2     3     4     5     6     7     MIRAC User s Manual    Check List for a Nights Observations    First star acquisition  generally at wavelength 2 2 um  either IR standard star or Yale bright star  catalog  Mirac parameters are set with t
282. t     8 1 2 Rebooting   lt ctrl alt delete gt  soft reboots  need to check the startup parameters after reboot    check current observation number so data is not overwritten    8 1 3 Stopping a run  while taking data     W ait  E nd    8 1 4 Getting around in DOS  mkdir creates a directory  rmdir deletes a directory  del deletes a file      changes to the     drive       changes directories    8 1 5 To get back to MIRAC from DOS              ret    or return     or  Make sure you are in      o  irtfMMYY directory  Type    exit    at the DOS prompt    8 2 Starting MIRAC    8 2 1 Prep Work  Set up log sheets  Fill cryogens  normally done by operator at end of observing night   Check that LN2 slide at camera is OPEN    54 MIRAC User s Manual    8 2 2 Turn on computer  amp  set up directories  In DOS   Create data directories  check disk space available    Check the c  nfs drives bat file to make sure IRTF network drives  are mounted properly    If not  edit c  nfs irtfdriv bat to reflect directory paths in the  network  Then copy irtfdriv bat to drives bat  Then    reboot   the computer  rem means remark  comment line  in  the bat file     8 2 3 Start MIRAC  Start program   type  mirac  at prompt to start the program  A batch file automatically sets the directory to o  irttfMMYY   where MMYY is the month of your run     8 2 4 Check detector temperature  Turn on temp switch  left switch  on the MIRAC power supply  The det  temp should read  3 7K  Mauna Kea    4 3K  sea level   If
283. t 40 and last 25 rows are removed from each image  Pixel column 1  row 1  is located at the  o  on the display  The example is given for initial images 128x128 pixels  Larger  images can be loaded in Processed Mode  but they must be trimmed to 128x128 in the following  steps  At each step of trimming  the image size must be maintained at 128x128  neither larger or  smaller   The partial images are placed in the first through fourth quadrants of the display  in  clockwise direction      Disp  Load Load filel  operation or processed mode       Header Source Image Initial Col 504 1251  Initial Row 40 1241  End Col 50   128   178  End Row 40   128 2 168   Util  Arith Justify   X Hlip   Y Flip   Disp  Header Source Image Initial Col 65   1   66  Initial Row 65   1   66  End Col 65   128   193  End Row 65   128   193   Util  Arith Justify    X Flip At this point  the partial image is in the third quadrant   Y Flip To move to the first quadrant     Disp  Header Source Image Initial Col 65   1   66  Initial Row 65   1   66  End Col 65   128   193  End Row 65   128   193    Disp  Save Current partiall    5 22 99 11  Reading Stored Data and Data Processing 83    Repeat for file2  file3  and file 4 moving to quadrants 2  3  4 and combine to four images  Disp  Load Load partiall   partial2   partial3   partial4  operation mode   Disp  Save Current combined    11 1 7 Processed Images    Previously stored maps can be read from the disks  The files can be in the default MIRAC format   or FI
284. t chapters is of the  form OBS  Header Observe Chop Frequency  where each item separated by     is executed by a  single key stroke  the first letter of the item  in either upper or lower case  The first item is the  command line  Subsequent items are menus or selections within a menu  A parameter  such as Chop  Frequency above  is entered with   enter    Page up moves one menu back up    esc   returns to the  command line  Alt F1 exits the menu canceling the changes that have been made  It is also possible  to move through the command line and menus with the cursor arrow keys  MIRAC menu switches  are turned on and off with y  yes  or n  no   When MIRAC is terminated by Quit  all current  parameter values are saved in current hdr  which is loaded when MIRAC is next run     6 1 Nightly Startup Tasks    The filled circle       indicates tasks which must be carried our for each startup  The open circle       indicates items which should be checked each startup  A bar  1  after either indicates items that can  be accomplished at anytime after the previous nights observing  For the first night the Start of Run  Setup Tasks  Section 5 2  which include the nightly setup should be carried out     1  Clip new Observing and Setup log sheets from MIRAC3 Log Sheets Notebook onto MIRAC  clipboard  Enter telescope  date  etc on Setup sheet  Enter additional items as you proceed   Use last night s setup sheet as an example     2  Check detector temperature at MIRAC PC computer   Turn on AL
285. te filters  one types FILTER followed by the name  Below are the    valid names    2 2K 11 7  3 8L 12 5  4 8M 17 4Q0  7 9Me 17 801  8 8 18 005  9 8 20 6Q3  10 3 CVFxx xx  10 6N BLANK    INITCAM   Send the current header parameters to the camera  equivalent to the OBS  Init Camera  Init command      44 MIRAC User s Manual    LOADHEAD name   read the given MIRACS settings file  header file   This is useful for restoring  a particular camera configuration    OFFSET ra dec   change the telescope offsets to the given ra and dec values  in arcsec  These are  performed when the next  RUN  command is done    PAUSE ss ss   Pause for the given number of seconds    RUN   execute    OBS  Run command to start taking data  The program will wait until this run is  complete before executing the next command line  Note that one  Run  command can actually  be many observations  if for example the program is also using an offset file    NWRun   same as RUN  except it doesnt wait for the observation to complete before moving on to  the next command  This is useful when wanting to do something like start a run  then go and  print out the last observation  Can be used in conjunction with the WAIT command to again  start waiting    WAIT   Causes the PC to wait until the current observation is complete until the next line of the  command file is executed  Can be used in conjunction with NWRUN to execute other  commands while data is being taken  Having a NWRUN followed by a WAIT is equal to doing  a
286. ted button screws from the base of the radiation shield and lift off the  shield     A19 6 Removing the upper section of LHe radiation shield     1     This requires removing the two heat sinking and radiation stopping clamps from the ribbon  cables and releasing the tape holding the cables to the radiation shield     226 MIRAC User s Manual    A19 7 Reassembling Cryostat  This is done by reversing the above steps     The bottom plate on the LN  shield will have to be removed from the shield in order to align the  actuators during reassembly  Remove the slotted 3 16 inch 4 40 slotted screws from around the  edge and two 1 8 inch 2 56 screws at the LN  slide mechanism  Lift off the bottom and set aside  taking care to avoid damage to the actuator rods  When reassembling the bottom  care must be  taken to align the two filter wheel actuator spades with the slots on the LHE base  The LN  slide  mechanism should be aligned and the two 2 56 screws installed before inserting the screws around  the edge of the bottom plates     The bottom of the radiation shield with the charcoal sieve should be baked out overnight in a  vacuum at about 60C     Each radiation shield should be installed wearing gloves and rocking shield gently while pushing  down  take care to align the holes       screws should go in without binding  If a screw binds  do  not force it  Leave it out     Use MIRAC cryostat assembly collars to prevent shield screws from falling into the cryostat     When reversing Sect
287. tem 5     e  6  Prepare data directories  Create today s data directories and check memory available in MIRAC computer and facility  computer at DOS prompt  Entries below are as an example   d    enter    mkdir d951202   enter    UT date for start of observing   dir   enter    to check that entry is correct   1    enter    cross mounted on facility computer   mkdir d951202  dir   enter    to check that entry is correct   If either directory has less than 200 Mbytes available  then either try another  drive   g  in  MIRAC or j  on facility computer  or delete old data directories   Note  on IRTF  the following is the usual drive   i  scrl data mirac  If running DOS shell within MIRAC  execute  ret  lt enter gt     NOTE  ret automatically executes o  and exit  It is necessary to always return to  the o  drive before exiting from the dos shell to MIRAC     Enter names of data directories in MIRAC program  again using the above directory names   Obs Init Data file directory  d  d951202   enter    Backup data directory  134951202   enter      esc      O  7  Prepare Command  Macro  Offset  and Frame Time Files as Required  Standard macro  offset  and frame time files are in the Observing directory  New ones  if  required should be prepared prior to the observing time  but sometimes must be edited  during observing  They are described in Chapter 7     o  8  Enter source catalog name  Obs  Header Source Information List of sources  e g    backspace   jupiter cat   enter      esc     
288. tes which level will be the resting position between integrations  and which beam  is subtracted from the other  This is important on the SO 1 5 m telescope  because the two beams  differ in image quality  The chop mode is illustrated in Figure 9 3     9 9 1 3 Chop Nod    This mode takes two sets of chopped images  one in the  Beam 1  position and the other in the   Beam 2  position  as defined by the telescope control computer  for a total of 4 images  This is  shown in Figure 9 4  The mode is selected by setting the Grab Chop switch to CHOP and setting the  Nod selection to  2 beam nod   The source is assumed to be in the  On Source  chopper beam of  the first chopped pair  and the other 3 beams are assumed to be of blank sky  Therefore  the image    5 22 99 9  Using       MIRAC Program 69    arithmetic for the two chop sets containing images  I1  12          13  14  where    contains the source  is  11 12     13 14   Figure 9 5 shows the chop nod mode with the source in all four beams        Chop Beam 2                Chop Beam 1  On source                Figure 9 3 Sky Modulation in the Chop Data Taking Mode          Chop Beam 2                                        1                                      1                 2     lt  gt        Figure 9 4 Sky Modulation in the Chop Nod Data Taking Mode    70 MIRAC User   s Manual       Chop Beam 2    Chop                Chop Beam 1       Nod Beam 1 Nod Beam 2   lt   6  69           Figure 9 5 Sky Modulation with source in a
289. th vs step to bring the  CVF and Spectrophotometer scans of the 9 725 and 11 03 um absorption lines  From one cryostat  disassembly and reassembly to another  the scale should not change at all and the start value by no  more than    05 um  The values determined November 13  1998 are     Scale 5 455822 x 107 um step  CVF start 38225 steps 7 239 um Steps Revolution 53333                                  MIRAC CVF CALIBRATION                                                       500       400     3     5 300        s     E    2 E    8  200E        E         100           E 9 725 um W  E          GuruLLLEELELELELLELEELELEELLELELEELEEEEEEEEEEEELEEEEEEEELELEEEEEEEELELEELISNL LLLI  7 8 9 10 Ti 12 13 14 15  Wavelength  microns          CVF  7 09 94       CVF  5 24 95       Beckman Hi res Fit         Beckman Low res    5 24 95 CVF Step 3058   14 640 um 0 0068727 um step    Figure A3 3 CVF Calibration July 9  1994 and May 24  1995    5 22 99   4         OBSLIST Program 119    Appendix 4         OBSLIST Program    The program OBSLIST EXE and its C source code OBSLIST C are in the C  MIRAC directory on  the MIRAC PC  The compiled C program can also be obtained from the MIRAC home page on the  WWW  Section 2 1          purpose of OBSLIST is to create and manipulate source list files   ALL CAT  YSO CAT  etc    These are the files that the telescope control program reads to obtain  the coordinates of an object for pointing the telescope and the MIRAC program reads to obtain the  coordinate
290. the floor at the east side of the pier  to the yoke and thence to the mirror cell support  At the IRTF  it is routed around the telescope  chamber wall hanging from the mezzanine to the west end of the telescope yoke  It follows an  IRTF white cable from a support point on the mezzanine with a slack loop to telescope yoke   Then if follows snugly along the yoke to a point near the MIM where it again follows the IRTF  white cable in a slack loop to the corner of the MIM where is snugly routed along the MIM  structure to the South West corner of the MIM  Then it is routed back  without support to the  electronics  where it is firmly strapped across the top edge with three velcro straps allowing about  3 feet for a loop to the connectors  At UKIRT  the cable is hung from the telescope chamber  wall near the control room to keep it off the  often wet  floor and thence routed on the floor to  the instrument area of the telescope  The short fiber cable sections in the computer crate have  adequate length for UKIRT     The routing of the cables at the IRTF is shown in Figures   14 7 and   14 8     5 22 99   14  Hardware Preparation and Setup 189       Figure A14 7 IRTF Cable Routing at the telescope     Note that in the bottom figure  the cable loop from the telescope yoke is incorrectly hung up on the  corner of the MIM  It should drop to 26 inches above the lowered platform  Also  the loop from the  camera to the MIM should drop 40 inches below the MIM  In the upper left figure  t
291. the guider box TV and MIRAC     5 22 99 7  Observing Procedures and Check Lists 49    7 9 Final Telescope Focusing  Step 1  Focusing in the infrared  Set the camera as in Section 7 8    Optimize focus for best appearance and fit FWHM  Step 2  TV focusing  At the IRTF  the relay optics mirror should be in the low mag position  The  relay lens should be approximately in the center of its range  use a 1 4 inch allen wrench to loosen  the large screw under the relay optics assembly   Slide the TV on the mounting shelf to obtain best  focus   At the 5 0  2 3 m  the TV should be mounted with no spacers  Put the relay optics mirror in the high    mag position  Then adjust the position of the relay lens loosening the large screw under the optics  assembly to provide the best image     7 10 Autoguiding at IRTF    7 11 Autoguiding at UKIRT    7 12 Observing Times    Setup  First Clear Night        25 hr Adjust guide TV pupil position and focus  This can be done in daylight with the dome  open or at night with the dome lights on     25 hr Adjust dichroic mirror  This can be done either in daylight or at night with the dome  open or closed     25hr Initial visible bright star acquisition and focus  This must be done in twilight or  darkness  This is a major task only with Steward Observatory telescopes    Shr   Set chopper throw with visible star  This requires darkness     25hr IR focus  Adjust TV relay optics focus at camera if necessary  Locate IR center on  TV screen     15 Set nod b
292. the standard output  usually the screen   To send the output to a file so that  it can be printed  use the redirection symbol on the command line in DOS or UNIX  examples are  given below      The source list is used in the MIRAC program and the telescope control computer  Each telescope  has a different format requirement  and in some cases a specific filename extension  The extensions  used are     MIRAC  cat  no requirement on extension   Steward Obs  cat  required extension             irt       requirement     UH 88 inch  uha  no requirement     120 MIRAC User s Manual    UKIRT  dat  required extension     A number of command line options are available  Sources may be added  deleted  inserted  and  sorted  The source list can be sent to a different output file  and the source list can be printed   Various modes are available for entering and deleting the sources  The available functions are  explained below     The form of the command is     obslist sourcefile   a  ra dec pmra pmdec type epoch objname      d n  TYP    i n    q    1    r n1 n2    o outlist    s      t x  telescopefile    p  TYP     m otherlist    f     path      where sourcefile     sources list  old Steward format  Optional command line switches         add source to list  The RA and DEC are in the usual format hour and degree format  e g    21 14 23 423   pmra and pmdec are the proper motions in sec century and  arcsec century  type is the object type  epoch refers to the RA and DEC coordinates   and ob
293. ther program  such as a spreadsheet program  There are two types of  information that can be output  The first outputs a single column of numbers from a range of images   and the second outputs specific quantities from a range of images at one line per image  For the  column data output  either a single frame in the observation can be printed to the file  or the data after  subtracting the off source images  The output file is ASCII with the numbers separated by spaces     For the second type  there are three choices  Temperature  for which time in seconds from the  beginning of the day  detector temperature  A D temperature  and heater voltage are given  Sky Flux   for which observation number  wavelength  sky flux  sky rms  and sky difference are given  and Error     For error  the digital signal processor checks for word slippage in the data transmitted from the  camera to the PC  displays the number of chop cycles with one or more errors in FrameErrors to the  right on the Main Screen  and saves the errors for each observation in the observation file header            errors for a set of files can be listed with  UTIL  Functi Output ASCII Type of Data Output Errors     For each observation and array channel  the number of errors is printed for each chop half cycle     12 5 FITS File Output    The FITS output utility takes the observation files and writes a FITS format file that can be read in  using other data processing systems  such as IRAF  The utility reads the observ
294. they would not be    positive integers to 1        files     files into IRAF     using file 212 as the reference   the results in    and storing          e containing th    first two columns    pixels  They may not in          with the IRAF file names        Type the file made by makelist   file and replaced the                necessary for lcoad     Coadd data to make final image   ataull7 sg4     the sigma map     tion offsets   of numbers in the files    Also note that the maxi  this indicates that t    with an    are created   calculated from the input file sizes and offsets   the input image sizes need not be the same   all bad pixels have been fixed or set equal  Look at the image that was created by lcoadproc     offsets determin  Compare       this example sinc             141    Also  may want to    and negative  for    taken out by this method   valid data value should  the data is  using imstat       the pixels from the mask image     bad pixels    expanding by 4 and using the gain    Here we are using an extinction value of 0 2   rocess   For all good files  move the cursor over    The script constructs a file list with the  these should not be used when    pk200 list to a format that the xcor program will need    the first character instead of the     i  that    smoothing both   atauoffs      d by peak_eval   these to  should match    the previous ones   up to within a             I was not too careful when  mum correlation value is  he cross correlation was  ati
295. tic box   Tools and screws for mounting and for removal for cryogen transfers are in the  Camera  Assembly  plastic box  Figure 414 5 shows the camera mounted with the MIRAC guider box   The following steps should be taken to install the camera at the telescope  The Camera  electronics connector positions are given in Figures   14 6 and   14 7     1  Mount the bolt circle adapter flange  with SO 1 5 m telescope bolt circle  on the  telescope mounting flange   This is usually done by the telescope staff      2  Remove the top cover plate and mount the guider box on the telescope using 6 1 2 12 x  1 25 screws with washers and a 3 8 allen wrench  The cryostat side should face  south  The guider box can be raised into position with an adjustable height table or  with the platform elevator     186    MIRAC User s Manual    3   This item is no longer done   Remove the TV cover plate on guider box and mount the  observatory guiding TV camera using a 5 32 ball driver  S O    For the IRTF  mount the TV shelf to the guider box and the IRTF TV camera on the shelf with a  1 4 20 socket head screw  The TV face should be xxx inches from the guider box  face     4  Note  Item 4 and 5 can be done in either order  Item 5 can be carried out in advance of  item 4 on a rolling cart in the control room   Remove the cryostat cover plate on  the guider box and window cover on the cryostat and mount the cryostat  The  cryostat mates to the guider box with a self aligning ball and tongue  Tighten the
296. tically to produce a single display image  All of the data can still be saved to disk  in its original form  these automatic calculations only affect the data displayed     When this mode is selected  the image is displayed in the main image display screen after receiving  it from the camera  The data is then in the image display buffer  It can then be displayed from the  DISP  BEGIN menu with any of the other options  such as contour image or one dimensional  SLICES through the image  It can also be saved as a processed file  When the next observation is    80 MIRAC User s Manual    complete  it replaces the data that is currently in the map display buffer  and it is displayed in the main  image screen     11 1 2 Accumulated Observation    This mode is similar to the Current Observation mode  except that when the new observation is  complete  it does not replace the current data  but is coadded to the current data  This mode is useful  when several images are taken of an object in the same position  The signal to noise ratio would  continue to improve in the displayed image with each additional observation  In practice  this mode  is rarely used  since there are always small drifts and offsets between each image for long integrations   which would misalign the successive observations     11 1 3 Replay Mode    The Replay display mode will display a range of images in the main image display screen  It is useful  for scanning quickly through a set of images when processing the 
297. ting up the computer  Other tasks should be done before leaving for the mountain to save  setup time for the first night     4 1 Object Lists and Air Mass Charts    It is useful to have lists of the target objects  plus SAO reference stars and flux calibration standards   entered in computer files in the proper format for MIRAC and for the telescope control computer   This saves time in moving between objects  since all the telescope operator must do is to type in the  object number  instead of the complete R A   Dec   proper motions  etc   and reduces the risk of  making errors when typing in the information  Another useful observing resource is a printed list of  each object and its airmass for various times throughout the night  This aids in planning the night of  observing  since one can see when each object will be observable  There are two utility programs  which perform these operations  OBSLIST  Observing LIST  and AIRMASS  Both are in the  MIRAC program directory in the DOS version and in the UNIX subdirectory in the UNIX version   These programs are described in detail in Appendices 4 and 5     The program OBSLIST is used to create  manipulate  and print lists of observing sources  The files  used by OBSLIST are of the form   CAT  These files are used by the MIRAC program  and   OBSLIST can also produce special versions required for the S O  telescopes    CAT  the IRTF     IRT  and U of Hawaii telescopes     UHA  and UKIRT    DAT  The          and UKIRT files can  b
298. tion of the display options and parameters setting 15 given in Section 9 6     9 5 Using MIRAC Menus and Functions    The MIRAC program utilizes a  pull down menu  system  similar to many other PC programs      complete listing of the menus is given in Appendix 12  The top  command  line of the main screen  has a number of menu choices as shown in Figure 9 1  These can be selected by moving the highlight  bar using the left and right arrow keys to the desired choice and pressing ENTER or the down arrow   Using the HOME key moves the highlight bar all the way to the left  and the END key moves the bar  all the way to the right  The top menu choice can also be selected by typing the command character  for that choice  There is    command character for each option on the command line menu  denoted  by the highlighted or underlined character in the word         character is the first unique character that  specifies the command  usually the first letter     Starting a top line command either executes a function  opens a pull down submenu with other  choices  or goes to another command line  items in upper case   In text mode  overlapping submenus  are displayed on the screen  In graphics mode  there is a single submenu area in the center of the  screen  Options in this submenu can change parameters  perform functions  or lead to further  submenus  When the choice leads to another menu  a right arrow character       is displayed on the  right side of the menu across from that sele
299. tire object  The approach is  to offset the telescope by small increments  usually by a few arcsec  for each set of 2 or so  observations     The camera sensitivity is normally give for the above case when the source is in one of the four chop   nod beams  However  if the source is single and compact  the chop and nod throws can be chosen    104 MIRAC User s Manual    to place the source in different positions on the array in each of the four beams  When the four  beams are differenced  the source is positive in two of the positions and negative in the other two   In this case  the sensitivity for a given observing time is greater by a factor of two     A1 2 Integration Times and Chop Nod Options    By integration time  we mean the accumulated time in one beam from the coadded frames in an  observation  We refer to the on chip integration time as the frame time  Since the array is read out  at a frame rate of approximately 10   1000 hz  there are many individual frames which are coadded  in the electronics and digital signal processor board to produce a single observation at one location  on the sky     The standard technique used with MIRAC is to take a large number of chop nod sets with an  integration time of 5 30 seconds in one beam  20 120 seconds total time  chop nod  This integration  time is short enough to minimizes image degradation due to telescope drift or changes in the sky  during the period of the integration and long enough to maintain a good observing duty cy
300. type out lines  containing the string in more than one file    grep  v search string filename s  to type out lines that  don t contain the string     7  Timesavers  7 1  Aliases    To  alias   or abbreviate a command string with an  alias string  type aliasalias string command string      8  History  Command Repetition      Repeat the entire last command line at any  point in the current command line     1 Repeat the last word of the last command line  at any point in the current command line     9  Run Command in Background  Job Control    To run a command in the background  as opposed to  the more common method of running commands in  the foreground  type a amp  after the command line   Then  you can type more commands to the command  prompt  or even run more commands in the  background for simultaneous command execution     10  Online Documentation    To see online Man Pages  type mancommand name     Doing More with SunOS   Quick Reference  This quick reference lists commands presented in this  manual  including a syntax diagram and brief    description     T  Files       11  Filename Substitution    Wild Cards        Character Class  c      Range  c c     c is any single character   String Class  strLstr    str is a combination of characters  wild cards     embedded character classes and embedded  string classes     Home Directory    Home Directory of Another User  user  List Hidden Files Is   1 a    12  File Properties    Seeing Permissions ls  1 filename    Changing Per
301. uld be used     rfits   91    oldirafname yes datatype real    This will read in all files and convert them to IRAF images with the file name 191     as real numbers   The old FITS files can then be deleted and all processing done on the IRAF images     5 22 99 Glossary 101    Glossary of Terms    Burst mode   The array is read in a burst  then there is a delay for a selected number of read times  while the array integrates flux until the next read     Chop   Motion of the secondary that causes the telescope beam to look at two different positions on  the sky  This motion is performed synchronously with the data taking so that images of both sky  positions are obtained  A typical distance between chop beams is 20 arcsec  and 10 msec wait to  allow the chopper to settle on the new position     Coimage   a set of frames co added on the signal processor boards at the camera     Column   the vertical direction on the array  there are 128 columns on the array  The array is read  out in blocks  with 2 columns and 8 rows in each block  and then rearranged in the DSP to form the  image     Flat field   an image of the background  1      sky   telescope emission   This image can be subtracted  from the on source observation to remove the background and leave only the source emission in the  image     Frame   a single array readout  typically taking  1 millisecond     Gain map   A map which contains the reciprocal of the relative gain of each pixel in the detector array  normalized to 
302. us entry for this source     5 22 99 6  Nightly Startup and Shutdown Check Lists 35    18  Set Next parameters    THESE SHOULD BE CHECKED FOR EVERY SET OF OBSERVATIONS   Object name   Wavelength   Integration time   Frame time  Typical values in Table 7 1  This can be automatically set for each filter when   Link Frame Filter  is on  Section 7 3     Chop nod mode   Continuous coimaging  Obs  Mode    Save  on off    Read Offsets  on off    Use command file  on off    Link Frame Filter  on off     Note  A number of MIRAC macros are useful for this     19  In the event that camera power is shut off and on again  repeat the procedure in Items 12  and    20     21           6 2  1   2     3     4     13  to reinitialize the DSP and camera     In the event that the MIRAC program hangs up and the computer is reboot  Ctrl Alt Del    execute  MIRAC  lt enter gt   and repeat the procedure in Items 5   12   and 13  to load the DSP program and reinitialize  the DSP and the camera  The parameter values last saved in current hdr will be reloaded   The next file number will not be up to date and should be corrected in Obs  Save  Other  parameters must be checked     It is also advisable to repeat Item 14  to reinitialize the filters   In the event that the MIRAC computer power is shut off and on again  reload and initialize the  DSP and camera as given in Items 5   12   and 13    Nightly Shutdown Tasks  Turn off facility secondary chopper control   Turn off telescope status and video monito
303. ut fully  including the zeros  in the extension  This first file sets the default file date to 3 17 95  so then all subsequent file  references can be accessed using the shorthand notation     To select one of the two images in a chop or four file names in a chop nod observation  use a colon  with the image number  1 4   e g    950317   005 2    9 4 Main Screen Display   The main screen display is shown in Figure 9 1  This and other screen displays are obtained using    Word Perfect  Grab  TSR program  Alt Shft F9   with the settings  color default VGA  Force BW  off  arcsec grid yellow  autorange  2 00  5 00  blip settings normal  detector electron gain 1 91     5 22 99 9  Using       MIRAC Program 61    electrons ADU 3191  and blank flux 0   gain matrix flat with value  0983  simulator normalization  1 0 and width 3 0  chop 10 9 Hz  frame 19 7 msec  and integration time  96 sec     The display consists of nine areas  top  command line  2nd line  run status bar  next 5 lines  observing  parameters  center graphic  array image with compass directions at the upper right  if on   left  graphic  FWHM plot  if on   right graphic  magnified image  if on   lower right graphic  source radial  profile  if on   next 9 lines  image statistics  if on   and bottom 2 lines  observing and display status     The command line contains both immediate commands and pull down menus  The observing  parameters displays the current parameter settings whether the array display is a current or past  
304. vX tar Z  where the X is the version  number of the latest release  Copy this file to its own directory and execute the following commands     uncompress mrc2ftsvX tar Z  tar xvf mrc2ftsvX tar    At this point you should edit the file Makefile if necessary to conform to your system  The default  configuration is for a Sun workstation running SunOS 4 3    Possible changes necessary include  pointing to the location of the ANSI C compiler on your system  A port to little endian machines  such as the DEC vaxstation has been done by Joseph Harrington  you must use the commented lines  in the Makefile instead of the ones set up as default  Once this has been completed  issue the  following command     make  and the executable file mrc2fts will be created     To convert the data  the program is executed with the data name as an argument  For example  to  convert the file   920605   440  the following command is given     mrc2fts c920605a 440    and the file 1920605   440 is produced     There are several options that may also be used when converting files      g gainfile   use the file  gainfile  as a gain map  The gainfile must be in FITS format  The values in  gainfile are multiplied with the data values before expanding and flipping the image      e exfac   expand the image by the factor  exfac   usually 4     132 MIRAC User s Manual     m maskfile   use the file  maskfile  as a bad pixel mask  Good pixels in the mask file should be set  to 1  bad pixels to zero  The file must b
305. wavelength or per night of observing  Other commands will be slightly different on your computer   such as the command to change to the data directory   1 below   or to copy the programs to the  current directory   2   Also         may want to run the various routines and programs with different  parameters  See the individual program documentation for details        NOAO SUN IRAF Revision 2 10 1EXPORT Fri Jul 24 11 23 23 MST 1992  This is the EXPORT version of Sun IRAF V2 10 1 for SunOS 4 1                                            Welcome to IRAF       list the available commands  type   or          get  detailed information about a command  type    help command     To run a  command or load a package  type its name  Typ    bye    to exit a  package  or    logout    to get out of the CL  Type    news    to find out  what is new in the version of the system you are using  The following  commands or packages are currently defined   ctio  images  local  pipeline  softools  utilities   dataio  language  noao  plot  stsdas   dbms  lists  obsolete  proto  system   cl   cd  cscr s2 hora mrc decl0 ex  cl    cp     mrcreduct   22  cl   cl    initreduct cl 2 3  cl    mrc2fts   921210     r 219 298  n  4  Reading c921210a 219   writing   921210a 219  Reading c921210a 220   writing   921210a 220  Reading c921210a 298   writing   921210a 298  cl   rfits f92  oldirafnamet  255  IRAF filename  a    File    0001 1 0 AIRMASS Size   32 x 20  File    0001 restored to IRAF File  1921210   219
306. ween two files differences comp diff    Translates characters N A N A tr    List files and directories dir dir Is    Change working directory set default chdir cd cd    Show working directory   s name show default cd pwd    Make a directory create   dir mkdir md mkdir    Remove a directory delete rmdir rd rmdir    Show disk usage show quota chkdsk quota    Show disk status show device disk vol df    Tape archiving backup diskcopy tar    Message system mail N A mail    Write a message to another user send  rvax only  N A write    Talk to another user phone N A talk    File transfer program ftp telnet kermit kermit procomm ftp telnet kermit    Display process status show system ver ps    Create a new process spawn command csh sh    Terminate a process stop  id    ctrl  alt dlt kill    Some available editors edt eve vi edlin vi ed ex emacs    C compiler cc link microsoft    cc    FORTRAN compiler fortran microsoft  77   77    Debuggers dbx    228 MIRAC User s Manual    A20 2 SunOS Quick Reference    1  Work Session  11  LogIn    Type username to system login prompt   Type password to password prompt     12  Change Password    Type passwd  followed by old password  and repeat  new password     13 Log Out    Type logout or CTRL D depending upon system  setup     2  File System  2 1 Create File    Type cat    filename  then text ending with CTRL D  or  see Editing Files     2 2  Make  or Create  Directory  Type mkdir directory name   2 3  Look at File    Type cat filename  or more 
307. which a pixel equals       for the standard settings for several telescopes  For the f 36 and f 15 telescopes magnification less  than and pixel and field size larger than the boldfaced values should not be used due to vignetting for  these magnifications and f ratios     Table 2 1 Magnification and Pixel Sizes    Nominal settings are in bold face type    Telescope Aperture Focal Ratio Scale Mag Pix Field A for   m     mm   arcsec   arcsec   Pix   2D  S O 90in 2 3 1 45 1 99 43 35 44 7 6           3 0    36 8 1 87 43 33 42 9 5  46 30 37 8 5  UKIRT 3 75 1 36 1 53 43 27 33 9 5  46  25 30 8 5         6 5 1 15 2 12 57  28 36 17 4  8 20 25 9 12 5  1 16 20 7 10  1 14 14 18 2 8 8  KeckII 10 f 40 522 43 091 11 5 9 1    5 23 99 2  Overview        Performance 7    2 4 Filter Selections    The filter selections and properties are given in Table 2 2  This table gives the effective wavelength   half power points  and filter mean transmission over the and  each weighted by the detector photon  response  The overall throughput is the product of the window  optics  and filter transmissions and  the detector photon response  Typical filter change times are given in Table 7 2     Table 2 2 MIRAC Filters    Filter  Waveln Ai          Bandwdth trans  Overall  um um um um fraction   mission thruput  2 2 2 02 2 38    35 16  3 8 3 5 4 1 61  16  4 8 4 42 5 18 277 16  7 9 7 74 8 06    32  04  8 8 8 36 9 24  88  10  9 8 9 31 10 29 98  10  10 3 9 79 10 82 1 03 10  10 6 8 11 13 09 4 98 47  117 11 14 12 2
308. within the packed file is assigned its own observation number as is done with data  taken in the normal mode  so the packed data file numbers are incremented by the number of  observations per run  For example  if the current observation number is 647  and the user is taking  data in the fast data mode with 10 observations per Run command  then the packed files will be  named  PyymmddA 647  PyymmddA 657           To display or process images taken in the fast data mode  the packed files must first be unpacked   where they are written to individual image files in the usual format  This is done using the  unpack   utility   UTIL  Functi Unpack Fast Data Files  described in Section 12 7  or by mrc2fts  described in  Appendix 7     The fast data mode can be used in the Grab or Chop mode with either nod off or  2 beam nod   In  the two beam nod mode  the number of observations per Run parameter specifies how many Grab  or Chop images to take in each beam  So if the mode is set to Chop Nod and fast data on with 10  observations per run command  then the program will take 10 fast data chop images in beam 1  then  offset to beam 2 and take another 10 fast data chops     9 9 3 Ultra Fast Mode    The ultrafast mode takes bursts of a 64x64 subarray and saves them to a packed file at rates up to 80  images per second  displaying the last image  The partial array size must be set in  OBS  Header Hardware  A  B  C  and D  There are no gaps between the images  except for chopper  delays   t
309. xels remaining below the Object Detection Sigma threshold when a fit is not enabled or outside the  radius of the Source inclusion width factor times the FWHM of the fit function when a fit function  is enabled  In the former case  the maximum number of iterations is given by the Limit for BKG  iterations  When a fit function is enabled  but Calculate source model sum 1s disabled  the source sum  is given by the sum of the signal relative to the mean background within a the source inclusion with  faction times the FWHM of the fit  When a fit is not enabled  the source strength is the sum of the  values of the pixels above the object detection limit relative to the background  When Calculate  source model sum is enabled  the source sum is calculating by integrating the fit function using the  parameters FWHM  peak  and background level  Weight data in fit  when on  causes larger data  values to be more heavily weighted in the source fit  When off  all weights        set to 1  Autorange  settings permits setting the display range to the minimum and maximum in the image  to a upper and  lower limit in number of noise sigma from the mean  or to manual values which are set in  DISP  Begin Gray Gray  Region for stats permits selecting a portion of the display for source  detection and noise calculation  This is useful when a source is in more than one chop nod beam   Invert new data converts any source in a negative chop nod beam to a positive source in the display     Other entrie
310. y                                           12  Table 7 1 MIRAC3 IRTF Typical Frame Times  msec                                41  Table 7 2 Falter Change TIMES 2                 EROR                       eO Sees 42     Table  7 3    BOCUS SERIES                                                    Care css           47  Table 7 4 Printer Timings                                                          51  Table   2 1 Standard Stars with Magnitudes Ordered by Right Ascension                 108  Table A2 2 Standard Stars with Magnitudes in Alphabetical Order                      109  Table A2 3 Standard Stars with Flux Density in Alphabetical Order                     110  Table A14 1 Cryostat Capacity and Hold Time                                     183  Table A14 2 Cryogen Consumption                                             183  Table A14 3 Temperature Controller                                                 193  Table A14 4 Cryostat Pupil                              194  Table A14 5 Cryostat Magnification 8    6                                          195  Table A17 1 Bias Inputs   Detector Cold                                         213  Table A17 2 Bias Inputs   Detector Room Temperature                              215  Table A17 3 Bias Inputs   Detector Input Continuity at Room Temperature               216  Table A17 4 Signal Outputs    12 c sehe                               SENE SETS 217  Table A17 5 Grounds and Array Temperature                            
311. y a factor of 1 26 and  point source sensitivity greater by a factor of approximately 1 6     2 7 Telescope and Sky Emissivity    The telescope and sky emissivity was determined at the Steward Observatory 2 3 m telescope on Kitt  Peak December 9  1992  The cryostat window was ZnSe  The ambient temperature 10 C  The  results are shown in Table 2 5  The camera beam spill over beyond the secondary was determined  by comparing the background signal with and without a cardboard annulus around the secondary     12    Waveln  um    8 8  9 8  11 7  12 5  20 6    Zenith  Backgnd  Digital  Units    417  1430  783  1027    MIRAC User   s Manual    Table 2 5 Telescope and Sky Emissivity    Total  Emiss  ivity     148     270  119  156    Window  Emiss  ivity     001   001   001   001    Di   chroic  Emiss  ivity     027   027   027     027    Tele   scope Sky  Emiss Emiss  ivity ivity    5 22 99 3  Observing Run Arrangements 13    3  Observing Run Arrangements  3 1 Observing Proposals    Outside proposals for MIRAC3 on the MMT  IRTF and UKIRT in collaboration with the MIRAC  team are welcomed  This collaboration includes both the observing proposal and subsequent  reduction and publication of the data  Collaborators should be prepared to contribute to the shipping  and cryogen costs for the observing  The liquid helium cost at the IRTF is approximately  100 per  day  The shipping cost from Tucson to Hawaii is  1600 to  2000 round trip  The draft proposal  should be circulated to the MIRA
312. y the gain and mask  etc      Z  corrects a chopped observation for which chop wait was set to zero  If the wait was not set to  zero  there is a warning message and no correction is made     Example 1  convert 10 files   5 14  taken in GRAB mode on August 30  1993     mrc2fts   930830     r 5 14    Example 2  convert 30 files   37 66  taken on 8 30 93  normalizing by gain117 map  and using  mask8 93 msk  expanding by a factor of 4     mrc2fts c930830a   r 37 66  g gainll7 map  m mask8 93 msk  e 4    5 22 99   8  Atmospheric Extinction and the aircor Program 133    Appendix 8  Atmospheric Extinction and the aircor Program    A8 1 Infrared Atmospheric Extinction    The earth s atmosphere absorbs IR radiation from astronomical sources  The absorption  or  atmospheric extinction  is dependent on the airmass  since that determines the path length and column  density of the line of sight to the source  The airmass is related to the angle from zenith by the  approximation Airmass   sec Z    1 cos Z    where Z is the angle from zenith     It is likely that the various sources and standard stars are observed at different airmasses throughout  the night  In order to properly calibrate the images  the flux must be normalized to a common  airmass  usually 1 0 or at zenith  This is done by determining the extinction value  and then applying  a multiplicative correction to the raw data based on the extinction and the airmass of the data  Under  photometric conditions the extinction value 
313. yed to the  screen in any way     Main image display screen   the screen that is displayed when the program is in one of the top line  main menus  such as OBS   PRN   DISP   or UTIL   If the display option of  Array  has been  selected in DISP  Options for Display  then the data in the Image Display Buffer will be displayed  in the center of the screen     Nod or Wobble   Offset that is performed where the telescope is offset to a new sky position to take  an integration  usually off source  A typical nod vector is 30 arcsec  and 3 4 seconds must be  allowed for the motion to complete before beginning the next integration     Observation   the data set consisting of many images  coadded frames  from the camera  including  all separate chop and nod frames  which are saved as a single file on the PC  For example  in the  typical nod observations  there will be two chop pairs at each nod position  The source will be in the  first image of the first chop pair  and the other three images will be of blank sky     Row   the horizontal direction of the array  there are 128 rows  The array is read out in blocks of  2 columns by 8 rows  and rearranged in the DSP to form the image     Run   an automated set of observations carried out in sequence as given by OBS  Mode How many  Obs Run     5 22 99 Al  Principles of Mid IR Observing 103    Appendix 1  Principles of Mid IR Observing      1 1 Mid IR Observing with Chopping  Nodding  and Offsetting    Observing at mid IR wavelengths from gr
314. ys after the end of the run  The data stored by MIRAC should be accessed with an individual  guest account  It is best to establish just one guest account for a particular observing program  To  obtain a guest account     login on herschel or wien as  guests    respond to password request with   enter   once or twice  provide your name  observing program number  and a password  start using the new account     5 22 99 5  Start and End of Run Setup and Shutdown Check Lists 21    5  Start and End of Run Setup and Shutdown Check Lists    The convention for indicating MIRAC program commands in this and subsequent chapters is of the  form OBS  Header Observe Chop Frequency  where each item separated by     is executed by a  single key stroke  the first letter of the item  The first item is the command line  Subsequent items  are menus or selections within a menu  A parameter  such as Chop Frequency above  is entered with    enter    Page up moves one menu back up    esc   returns to the command line            exits the  menu canceling the changes that have been made  It is also possible to move through the command  line and menus with the cursor arrow keys     5 1 Preparation of MIRAC after Shipping or Storage    If MIRAC has been shipped or in storage  follow the unpacking and setup instructions in  Appendices 13 and 14     5 2 Start of Run Setup Tasks    Before carrying out these tasks  the Software Preparation and Hardware Preparation and Setup   Chapter 4 and Appendix 14  shou
315. zed by the program  All others are regarded as   Targets   The new version of the CATALOG program by Dave Harvey   5 89   does not allow for  the TYPE field to be filled by text  so these must be stripped from the file if one wants to use that  program  The output is sent to the standard output  usually the screen   To send the output to a file  so that it can be printed  use the redirection symbol on the command line in DOS or UNIX   Examples are given below     A number of command line options are available  Several predefined observatory sites may be  selected with the   o  option  The number of columns on a page may be determined with the   c            option  The range of UT may be selected with the   r  option   usage  airmass sourcefile mm dd yyyy   a  t  s   c n    oxx    r n1 n2      where sourcefile     file name of source list  telescope format  mm dd yyyy   month  day  year of desired night    Optional command line switches      a specifies maximum airmass  default 2 5     124 MIRAC User s Manual     t specifies targets only   s specifies standards only   c number of columns in output  default 7    oxx specifies observatory  where xx is  kp Kitt Peak  default   ml Mt  Lemmon  mk Mauna Kea  ct Cerro Tololo      specify range of UT  where nl and n2 are  the start and end UT  0 and 14 are the defaults    p put page numbers at top right of page  default none     A few examples follow   airmass sources cat 3 13 1993  s  c 3  omk    this prints to the screen the airmas
    
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