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RES-22XR3 Installation Manual - Configuration 4

1. DUNN e um ii i TTT wun j iia d GC Figure 2 Front View of a Standard Rear I O RES 22 Chassis Doors Removed Themis Computer Preface Figure 3 Rear View of a Standard Rear I O RES 22 Chassis Figure 4 Front View of a Front I O RES 32 Chassis Figure 5 Rear View of a Front I O RES 32 Chassis Themis Computer xxiii RES 22XR3 Installation Manual Configuration 4 Version 1 0 xxiv The 2RU high 3 5 RES 22XR3 Configuration 4 has been designed to fit into a standard 19 rack and is provided with rack mount brackets without handles Optional rack mount brackets with handles and optional rack mount slides are also available The RES 22XR3 Configuration 4 is rugged enough to withstand extreme shock up to 25G temperature up to 50 C and EMI such as that associated with such demanding markets as the military aerospace and telecommunications indus tries The two Intel Xeon 5500 5600 series CPUs operate with a QPI QuickPath Intercon nect up to 6 4 GT s GigaTransfers per Second and support up to 288 GigaBytes of DDR3 ECC Registered memory modules The RES 22XR3 Configuration 4 is based on the functionality and capability of the following two devices e Intel 5520 Tylersburg chipset e ICHIOR IOH 36D An overview of RES 22XR3 Configuration 4 design and specifications is given in Chapter 1 Overview and Specifications of this manual Website Information The
2. 1 9 2 Rack Mount Slides Optional Rack Mount Slides can be mounted on each side of the RES 22XR3 Configuration 4 for the purpose of sliding the unit in and out of a rack Mounting slides are optional and can be ordered at the time of purchase To learn how to install rack mount slides refer to Appendix B Rack Mount Slide Installation Table 1 8 Approximate Weights of the RES Series Weight CPU EC Model Approximate Sockets Depth Description RES 12XR3 19 5 Ibs 8 9 kg 2 20 Includes e All CPU sockets filled e 6 DIMMs RES 12XR3 S 17 Ibs 7 7 kg 2 17 e 2 storage drives e 2 PCI cards e 1 CD RW DVD ROM drive RES 11XR3 16 5 Ibs 7 5 kg 1 17 e 2 power supplies RES 22XR3 25 Ibs 11 4 kg 2 20 Includes P e All CPU sockets filled RES 22XR3 S 23 Ibs 10 4kg 2 17 e 6 DIMMs e 2 storage drives e 2 PCI cards RES 22XR3 FIO 25 3 Ibs 11 5kg 2 16 e 1 CD RW DVD ROM drive e 2 power supplies RES 21XR3 22 5 lbs 10 2 kg 1 17 RES 32XR3 28 5 lbs 12 9 kg 2 20 Includes i e All CPU sockets filled RES 32XR3 S 26 5 Ibs 12 kg 2 17 e 6 DIMMs e 2 storage drives e 2 PCI cards RES 32XR3 FIO 29 Ibs 13 2 kg 2 16 e 1 CD RW DVD ROM drive e 2 power supplies RES 31XR3 26 Ibs 11 8 kg 1 17 Themis Computer Installation Section Chapter Installation and Operation This chapter describes e How to install a memory module storage drive PCI card 60 mm fan power supply and lithium b
3. teeereeenneenenneeennee 3 24 SSD E RE 3 24 33 oe ACPE erregt 3 24 3 3 13 1 ACPI Aware O S Available when supported by the OS 3 24 3 3 13 2 ACPI Version Features osaimvaeiv tuntav kka eege eege ee 3 24 xi Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 33 13 29 Ee 3 24 S134 APIC AGCPL SCL TRO EE 3 24 3 13 Headless Modesta min ee ee 3 25 3 3 13 6 NUMA Support sesute nln e s 3 25 3 3 13 7 ACPESLIT Table EE EE 3 25 3 3 13 8 High Performance Event Timer si 2 3sescees5ccceesds kaasata kaka 3 25 e E WHEA SUpport E 3 25 3 3 14 Trusted Computing Available when a TPM device is installed on the motherboard ee 3 25 3 3 14 1 TCG TPM Trusted Platform Module Support 0 0 0 3 25 3 3 15 Event Log Configuration EE 3 26 Ded a View Event EEN 3 26 3 3 15 2 Mark all Events as Read sold has issil sl aaa 3 26 30192 Clear Event LOS amka aa 3 26 3 3 13 4 PCE Error Log cc ciuieietsseicaitianssiach esta jadasse les ENEE 3 26 KE Sec rity SE LUNGS vms ile tualett 3 27 SAA Supervisor PassWord TT 3 27 512 User PassWord aduta laas maameeste 3 27 3 4 3 Change Supervisor Pass DEE 3 27 3 4 4 Change User Password t acssis sais tated seas Denge gen gedet Sen E 3 28 3 4 5 Clear User Password Available only if User Password has been set 3 28 3 4 6 Password EE 3 28 3 4 7 Boot Sector Virus Protection ioviakottaavan auk atastaesdkaka keda eegen saava ats yes 3 28 SEET 3 29 3 5 1 Boot Device Eet saic
4. General Section Chapter Overview and Specifications 1 1 Overview The RES 22XR3 Configuration 4 see Figure 1 1 below a block diagram is given in Figure 1 2 on page 1 3 is a rack mounted system designed specifically for above average shock and vibe environments The RES 22XR3 supports single or dual Intel 1366 pin LGA 64 bit 5500 5600 Series Xeon processors each with a QPI QuickPath Interconnect up to 6 4 GT s Giga Transfers per second support ing 288 GB of 1333 1066 800 MHz DDR3 ECC Registered memory modules Its computer graphics intensive and diverse I O capabilities are ideal for military aero space and commercial telecommunications applications Motherboards supported by Configuration 4 are listed in Table 1 1 on page 1 2 Figure 1 1 RES 22XR3 Configuration 4 Configuration 4 with Rack Mounts 1 1 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Table 1 1 RES 22XR3 Configuration 4 Motherboard Options Moth q PCl e PCI X and PCI Slots other emory S 2 board PMI SATA SAS Slots Graphics Audio pci e PCl e PCl e Sr EGE x16 x8 x4 2 X8DTN Add Yes 18 Yes slot4 e 3 e slot 6 a Super Micro Computer Inc b Add is defined as an add on card installed in the SIMLC SIMLP IPMI slot c One PCl e x4 in an x8 slot 5 d One 64 bit 133 MHz PCI X slot 3 and two 6
5. used on the system once WHO eg installation is complete If you IO Engish mia nesei choose to install other D Engish dee talad languages itis possible to CI Enghtety mebtpmez IT change the default language O Engish tiime after tire installation ar igith eth alice ly Red Hat Linux can install and o HI support several languages To HO Engish K ime use more Man ane language on CI Esnimis Your sysiom choose specific C Famese Farce alamta languages to be installed or O jet select all languages to Nave all lp h meigum available languages installed lf oat be d on the system lt 1 7 Peach grenze Use the Reset butten te cancel ai Feeney ears mmimirgi d hornet zzlechang f IS rs pel Lg gel L Aen Je ps et EE Figure C 4 Language Selection Once you select the appropriate language click Next to continue Step 5 Using your mouse select the correct layout type for example U S English for the keyboard you would prefer to use for the installation and as the system default see Figure C 5 on page C 5 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Qe Select the appropriate keyboard for the system AE Soventan Spanish Sweden viks french Swiss French latint Suess German Swiss Garman tatin1 Tamil insonpt Tamil Typewriters Turkish ae US thteenational Ukrainian Umited Kingaom ip Ca m
6. RES 22XR3 Configuration 4 Electrical Specifications Description Parameter AC 120 volts 750W DC 48 volts 750W DC 28 volts 500W Input Power typical e 420 watts typical e 420 watts typical e 450 watts typical Input Current e 3 5 amperes 120 Vac e 13 5 amperes 48 Vdc e 16 amperes 28 Vdc Input Frequency e 47 63 Hertz NA NAP Input Voltage e 100 265 Vac e 40 72 Vdc e 18 36 Vdc H 9 internally fused internally fused internally fused Input VA Rating e 425 VA NA NA BTU Rating e 1447 BTU hour e 1447 BTU hour e 1447 BTU hour Power Factor e 0 99 NA NA Input Leakage Cur e 35mA NA NA rent e Y Type e Y Type Pug Type SES SVS5 4 or eguivalent SVS5 4 or eguivalent a Does not include plug in PCI cards b NA Not Applicable 1 8 2 1 System Power The RES 22XR3 operates with two N 1 redundant power supplies of 750 watts capacity each that auto range single phase AC input from 100 to 240 VAC 47 to 63 Hertz sources Filtered and fused internal AC is supplied to each power supply from a rear mounted power connection Two optional N 1 redundant DC power supplies of 750 watts 48 volts or 500 watts 28 volts each may be substituted for the AC power supplies see Table 1 7 These supplies should be specified at the time of your order Note Some AC RES systems may be installed with 650 watt instead of 750 watt power supplies which should not effect the performance of the system Output Voltage The R
7. Reguirements In order to use Serial Flash for Boot Sector Recovery you will need to meet the fol lowing requirements The Target system the system that needs BIOS updates must have a serial port and Serial Flash support embedded in the BIOS image file e The Host system should also have a serial port and a terminal program that supports XModem Transfer protocol Hyper Terminal for the Windows operat ing systems and minicom for Linux FreeSBD etc A es A Null modem serial cable How to use Serial Flash for Boot Sector Recovery Connect a Null modem serial cable between the target system and the host system that runs the terminal program 1 Make sure that the new BIOS Image file is accessible for the host sys tem Themis Computer 3 BIOS Setup Utility BIOS Recovery 2 Start the terminal program on the host system and create a new connection 3 Use the following communication parameters for the new connection a Bits per second 115200 bits sec b Data Bits 8 c Parity None d Stop Bit 1 e Flow Control None 4 When BIOS flashing is completed the computer will reboot Do not interrupt the flashing process until it is completed When the system comes back online click the Connect gt button in the Hyper Terminal The terminal screen will display the following ee Oey Ry gabe Gey ee dey Toa Press lt SpaceBar gt to update BIOS pe atk i hee dd eee ge Confirm upd
8. in one of two places e The master boot record MBR This is the recommended place to install a boot loader unless the MBR already starts another operating system loader such as System Commander The MBR is a special area on your hard drive that is automatically loaded by your computer s BIOS and is the earliest point at which the boot loader can take control of the boot process If you install it in the MBR when your machine boots GRUB presents a boot prompt You can then boot Red Hat Enterprise Linux or any other operating system that you have configured the boot loader to boot see Figure C 11 on page C 11 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation e The first sector of your boot partition This is recommended if you are already using another boot loader on your system In this case your other boot loader takes control first You can then configure that boot loader to start GRUB which then boots Red Hat Enterprise Linux install Boot Loader record on dev nda Master Boot Record MER Sev NGal Hest sector Of BOOL partition Charge Drive Order Force LBA32 not normally required IF You ws to a omtault options to the boot command enter them into De General kere parameters mo General heme parameters D Avase Notes Back gt Host Figure C 11 Master Boot Record MBR If your system only uses Red Hat Enterprise Linux you should choose the MBR Click the Change Driv
9. lever to the chassis see Figure 2 11 to secure both power supplies 2 14 Themis Computer 2 Installation and Operation 2 2 Rack Mounts 2 2 1 Mounting Brackets The rack mount brackets flanges are used to secure the chassis to the 19 rack see Figure 2 12 Handles are used to pull the RES 22XR3 from the rack when rack mount slides have been installed on the sides of the chassis see following section Right Mounting Bracket Figure 2 12 Right Rack Mount Bracket 2 2 2 Rack Mount Slides Optional Rack Mount Slides can be mounted on each side of the RES 22XR3 Configuration 4 for the purpose of sliding the unit in and out of a rack Mounting slides are optional and should be ordered at the time your system is purchased To learn how to install rack mount slides refer to Appendix B Rack Mount Slide Installation Caution Any screws used to mount a slide to a RES 22XR3 chassis must not ex ceed a length of 3 8 to prevent excessive penetration of the chassis Themis Computer RES 22XR3 Installation Manual Configuration 4 Version1 0 2 3 Operation 2 3 1 Plugging in the AC Power Cords Before powering on the RES 22XR3 plug in the AC power cords as follows 1 On the rear of the RES 22XR3 plug an AC power cord shipped with unit into the AC power socket on each power supply see Figure 2 13 Locking Lever Power LED AC Power Socket Figure 2 13 AC Power Socket
10. 2 Terminal Type 3 2 VT UTF8 Combo Key Support 3 2 Index 5 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Remote On Off Switch module D 1 configuration D 2 ordering D 2 Re Packaging for Shipment F Re Packing Instructions F RES Audio USB Serial Port Custom Module E 1 RES Series Models Approximate Weights 7 20 RES x2XR3 20 Manual Matrix xx RES x2XR3S RES x1XR3 17 Deep Manual Matrix xxi RES x2XR3S x1Xr3 Manual Matrix xxi ROM File Extraction Screen 3 36 S S M A R T For Storage Drives 3 8 Safety Instructions iv Electrostatic Discharge ESD v Instructions for the Lithium Battery vi Operation of Laser Source Devices v SATA 1 Configuration Configure SATAFI as 3 15 ICH RAID Code Base 3 15 screw locations for rack mount slides B Security Settings Screen 3 27 Serial Port E 3 Serial Port COM1 EA serial ports A 2 E 5 Shock 17 17 shock xxiv Shock endurance 2 Sidebars xxv slides rack mount xxiv slimline drive 2 Sound Baffle Installed front 1 17 rear 1 18 Southbridge 2 Southbridge Configuration BIOS EHCI Hand Off 3 4 Legacy USB Support 3 14 Index 6 USB 2 0 Controller 3 14 USB 2 0 Controller Mode 3 4 USB Functions 3 14 Special Features 6 Specifications Altitude 7 15 BTU Rating 6 Dimensions 7 15 Electrostatic Discharge 1 17 Input Current 1 16 Input Frequency 1 16 Input Leakage 1 16 Input Power 1 16 Input VA Rating 1 16 Input Voltage 6 Maximum We
11. I O panel see Figure A 3 for a connector pinout Pinout signal descriptions are listed in Table A 4 Symbol VGA Display Port CO kg 15 11 Figure A 3 VGA Connector Pinout Table A 4 VGA Connector Pinout Signal Descriptions Pin Signal Description 1 RED Red video 2 GREEN Green video 3 BLUE Blue video 4 MS2 Monitor ID bit 2 5 GROUND Ground HSync 6 GROUND Red return 7 GROUND Green return 8 GROUND Blue return 9 NC Key no pin 10 GROUND Ground VSync 11 MSO Monitor ID bit 0 12 MS1 SDA DDC Data Monitor ID bit 1 13 HSYNC Horizontal sync 14 VSYNC Vertical sync 15 MS3 SCL DDC CLk Monitor ID bit 3 Themis Computer RES 22XR3 Installation Manual Configuraton 4 Version 1 0 A3 A 4 Gigabit Ethernet LAN Ports The RES 22XR3 supports two RJ45 Gigabit Ethernet LAN port connectors LAN 1 and LAN 2 with two embedded LEDs see Figure A 4 Pinout signal descriptions are listed in Table A 5 Link Speed Network Traffic Figure A 4 Ethernet Connector Type RJ45 Table A 5 RJ45 Ethernet Pinout Signals LAN 1 and LAN 2 Pin Signal Name Pin Signal Name 1 TRDO 5 TRD2 2 TRDO 6 TRD1 3 TRD1 7 TRD3 4 TRD2 8 TRD3 e The color of the left LED indicates the LAN connection speed Off 10 MHz Green 100 MHz Amber 1 GHz e The right LED when lit indicates LAN activity network
12. Measure the depth of the 19 equipment rack into which the RES 22XR3 sys tem will be installed this can vary from 24 to 30 Ge Using the depth of the equipment rack adjust and attach the front and rear slide brackets to the outside slide section using the screws washers and nuts provided with the slide kit A With all slide brackets securely attached to both the right and left outside slide sections install both sections to the inside right and inside left of a 19 rack with two bolts per bracket making sure there is adequate room for the 3 RU height 5 25 of a RES 22XR3 system 5 Carefully insert the RES 22XR3 system into the 19 rack so that the inside slides on both sides of the chassis travel smoothly into the channels of the out side slide sections Push the system into the rack until the mounting brackets on the front of the chassis are flush with the front of the rack 6 Secure the RES 22XR3 system to the 19 rack with two bolts on each side B 2 Themis Computer B Rack Mount Slide Installation Outside slide section Sa A Attach the rear long slide bracket to the outside slide section with screws washers and nuts included in slide kit Attach the front short slide bracket to the outside slide section with screws washers and nuts included in slide kit A a A Attach both inside slide sections to the left and right sides of the RES 22XR3 chassis with 8 32
13. N CS 7a SE CN L Zei Sahl 3 KE Oe A To release squeeze battery latch together B E and remove battery from socket Figure 2 6 The RES 22XR3 Lithium Battery and Socket 2 1 4 2 Installing a Lithium Battery Perform the following steps to insert a new lithium battery 1 Tilt the replacement battery into the empty socket so that it is angled under the battery latch see B Figure 2 6 2 Carefully press down on the battery until it clicks firmly into place 2 8 Themis Computer 2 Installation and Operation Installation Procedures 2 1 5 Storage Drives Perform the following steps to remove and install a storage drive which may be either SATA2 or SAS The X8DTN motherboard supports up to six SATA2 devices but additional SATA2 devices may be added by installing a SATA2 control ler into one of the PCI slots a SAS controller may also be installed IDO is designated as the boot drive For SAS drives the lower left hand remov d Note For SATA2 drives the upper left hand removable storage drive SATA2 able storage drive SAS IDO is designated as the boot drive The front doors of the RES 22XR3 must be unlocked and opened to access the SAS SATA2 storage drives 2 1 5 1 Opening the RES 22XR3 Front Doors required for Storage Drive access To access the removable storage drives you must first open the two front doors see Figure 2 7 The knurled captive screw on the front of the RES 22XR3 allows the doo
14. configured for the fastest speed of RAM used Themis Computer RES 22XR3 Installation Manual Configuration 4 Version1 0 2 1 2 1 Installation The following procedure explains how to install the DDR3 Memory Modules 1 Loosen and remove the eight screws securing the air flow deflector see Fig ure 2 2 2 Select the memory slot that you wish to install a new Memory Module see Figure 2 3 on page 2 5 Figure 2 2 Remove RES 22XR3 Air Flow Deflector X8DTN Motherboard 2 4 Themis Computer 2 Installation and Operation Installation Procedures CPU 2 Socket LAME Shae riid s Bn Important m D Always populate Blue slots first FZ Ll K p k KS VV EA P2 DIMM 1C Branch 0 d P2 DIMM 1B P2 DIMM 1A P2 DIMM 2C Branch 1 lt P2 DIMM 2B P2 DIMM 2A P2 DIMM 3C KERE Branch 2 P2 DIMM 3B 1743 EIER P2 DIMM 3A ei e CPU 1 Socket Branch 0 lt S eh S i Ee P1 DIMM 1A e E P1 DIMM 2C K l Branch 1 lt P1 DIMM 2B VK P1 DIMM sn Cal 4 P1 DIMM se 1 Branch 2 lt DIMM 3B WE i P1 DIMM 3A TYT AASIA ae ae 2 Figure 2 3 Memory Module Slot Locations X8DTN Motherboard 3 If a module is already seated in the slot you have selected for installation re move it by gently pressing down and outward on the latches at both ends of the slot see Figure 2 4 on page 2 6 then pulling the old module directly up from the slot until it is free of the connector 2 5 Themis Computer R
15. for the recovery process to load the file A USB flash device such as a USB Flash Drive a USB CDROM or a USB CDRW device can be used for this purpose Insert the USB device that contains the new BIOS image the ROM files saved in a root directory into your USB drive While turning the power on press and hold lt Ctrl gt and lt Home gt at the same time until the USB Access LED Indicator comes on This might take a few seconds Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 Once the USB drive LED is on release the lt Ctrl gt and lt Home gt keys AMIBIOS will issue beep codes to indicate that the BIOS ROM file is being updated Note When BIOS flashing is completed the computer will reboot Do not inter rupt the flashing process until it is completed Se Boot Sector Recovery from an IDE CD ROM This process is almost identical to the process of Boot Sector Recovery from a USB device except that the BIOS image file is loaded from a CD ROM Use a CD R or CD RW drive to burn a CD with the BIOS image file in it and name the file SUPER ROM for the recovery process to load the file 3 7 4 Boot Sector Recovery from a Serial Port Serial Flash This process also known as Serial Flashing allows the user to use a serial port to load a BIOS image for Boot Sector recovery This feature is usually used for embed ded systems that rely on a serial port for remote access and debugging
16. groups of your choice you get one last chance to go back before starting the installation process Click Next if you re happy with your choices or click Back to make changes see Figure C 18 on page C 18 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 RED HAT ENTERPRISE LINUX 5 Click next to begin instaliation of Red Hat Enterprise Linux Server A complete fog of tne installation can be found in the file rootinstali iog after rebooting your system A kickstart file containing the Installation options selected can be found in the file root anaconda ks cfg after rebooting the system D Berease Notes aso Figure C 18 Option to Review or Continue Click Next Step 19 Installation starts see Figure C 19 RED HAT ENTERPRISE LINUX 5 installing giib2 2 12 3 2 4c6 1386 2 MB A library of handy utitity functions QD ketease Notes E ba Figure C 19 Installation Begins Themis Computer C Red Hat Enterprise Linux 5 Installation Installation Step 20 Congratulations Your Red Hat Enterprise Linux installation is now com plete The installation program prompts you to prepare your system for reboot Remember to remove any installation media if it is not ejected automatically upon reboot see Figure C 20 RED HAT ENTERPRISE LINUX 5 Congratulations the installation is complete Remove any Media used during the Installation process and pre
17. options are Disabled Enabled and Auto default 32 Bit Data Transfer Select Enable to enable the function of 32 bit IDE data transfer The options are Enabled default and Disabled IDE Detect Timeout sec Use this feature to set the time out value for the BIOS to detect the ATA ATAPI devices installed in the system The options are 0 sec 5 10 15 20 25 30 and 35 default PCI PnP Configuration Clear NVRAM This feature clears the NVRAM Non Volatile Random Access Memory during system boot The options are No default and Yes Plug amp Play OS Selecting Yes allows the OS to configure Plug amp Play devices This is not required for system boot if your system has an OS that supports Plug amp Play Select No default to allow the AMI BIOS to configure all devices in the system Themis Computer 3 BIOS Setup Utility 3 3 9 3 3 3 9 4 3 3 9 5 3 3 9 6 3 3 9 7 3 3 9 8 3 3 9 9 Advanced Setup Configurations PCI Latency Timer This feature sets the latency Timer of each PCI device installed on a PCI bus Select 64 to set the PCI latency to 64 PCI clock cycles The options are 32 64 default 96 128 160 192 224 and 248 PCI IDE BusMaster When enabled the BIOS uses PCI bus mastering for reading writing to IDE drives The options are Disabled and Enabled default SR IOV Supported Select Enabled to enable SR IOV Intel Single Root I O Virtualization support to enhance Virt
18. physi cally becomes unavailable Select 3F8 IRQ4 to allow the serial port to use 3F8 as its T O port address and IRQ 4 for the interrupt address The options for Serial Port are Disabled 3F8 IRQ4 default 3E8 IRQ4 2E8 IRQ3 The options for Serial Port2 are Disabled 2F8 IRQ3 default 3E8 IRQ4 and 2E8 IRQ3 3 3 10 3 Floppy A 3 3 11 3 3 11 1 This feature allows the user to select the type of floppy drive connected to the system as specified The options are Disabled 360KB 5 1 4 1 2MB 5 1 4 720KB 3 1 2 1 44MB 3 1 2 default and 2 88MB 3 1 2 Remote Access Configuration Remote Access This allows the user to enable or disable the Remote Access feature The options are Disabled default and Enabled If Remote Access is set to Enabled the following items will display Serial Port Number This feature allows the user decide which serial port to be used for Console Redirec tion The options are COM 1 and COM2 default Base Address IRQ This item displays the base address and IRQ of the serial port specified above The default setting is 2F8h 3 Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations 3 3 11 2 Serial Port Mode This feature allows the user to set the serial port mode for Console Redirection The options are 115200 8 n 1 default 57600 8 n 1 38400 8 n 1 19200 8 n 1 and 9600 8 n 1 3 3 11 3 Flow Control This feature allows the user to set th
19. platform also offers a wide range of RAS Reliability Availability and Serviceability features These features include memory interface ECC x4 x8 Single Device Data Correction SDDC Cyclic Redundancy Check CRC parity protection out of band register access via SMBus memory mirroring memory sparing and Hot plug support on the PCI Express Interface The 5500 Series Processor and the 5520 Chipset e Four processor cores in each processor with 8MB shared cache among cores Two full width Intel QuckPath interconnect links up to 6 4 GT s of data transfer rate in each direction e Virtualization Technology Integrated Management Engine supported e Point to point cache coherent interconnect Fast narrow unidirectional links and Concurrent bi directional traffic e Error detection via CRC and Error correction via Link level retry Themis Computer 1 Overview and Specifications 1 4 1 4 1 Special Features Recovery from AC Power Loss BIOS provides a setting for you to determine how the system will respond when AC power is lost and then restored to the system You can choose for the system to remain powered off in which case you must press the power switch to turn it back on or for it to automatically return to a power on state See the Advanced BIOS Setup section to change this setting The default setting is Last State 1 5 1 5 1 1 5 2 PC Health Monitoring This section describes the PC health mon
20. screws included in slide kit Figure B 2 RES 22XR3 Hack Mount Slide Installation B 3 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 B 4 Themis Computer Appendix Red Hat Enterprise Linux 5 Installation GA Introduction Welcome to the Red Hat Enterprise Linux Installation Guide This guide contains useful information to assist you during the installation of Red Hat Enterprise Linux via DVD device From fundamental concepts such as installation preparation to the step by step installation procedure C 2 Installation Step 1 Insert the Redhat Enterprise Linux 5 DVD and Power on the system you will see the first installation screen with a boot prompt press ENTER to begin installation see Figure C 1 on page C 2 C 1 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 RED HAT ENTERPRISE LINUX 5 To install or upgrade in graphical mode press the To install or upgrade in text mode type Use the function keys listed below for more information Fi Main F2 Options F3 General1 F4 Kernel FS5 Rescuel Figure C 1 Power On after Linux DVD is Inserted into Drive Step 2 Press the tab key to move focus to the Skip key then press Enter key to Continue see Figure C 2 on page C 2 Bed Hat Enterprise To begin testing the CD media before installation press OK Choose Skip to skip the media te
21. to provide warning of possible CPU overheat defined by the CPU manufacturer may result in CPU overheat or system instability When the CPU temperature reaches this predefined threshold the CPU and system cooling fans will run at full speed Caution 2 To avoid possible system overheating please be sure to provide ade guate airflow to your system 1 Caution 1 Any temperature that exceeds the CPU threshold temperature pre The options are e The Early Alarm Select this setting if you want the CPU overheat alarm including the LED and the buzzer to be triggered as soon as the CPU temper ature reaches the CPU overheat threshold as predefined by the CPU manufac turer The Default Alarm Select this setting if you want the CPU overheat alarm including the LED and the buzzer to be triggered when the CPU temperature reaches about 5 C above the threshold temperature as predefined by the CPU manufacturer to give the CPU and system fans additional time needed for CPU and system cooling In both the alarms above please take immediate action as shown below 3 3 12 2 CPU Temperature 2 CPU Temperature 1 System Temperature This feature displays current temperature readings for the CPU and the System The following items will be displayed for your reference only CPU Temperature 2 CPU Temperature 1 The CPU thermal technology that reports absolute temperatures Celsius Fahrenheit has been upgraded to a more advanced feature b
22. to save all open files properly close applications and broadcast a warning to all users on any active networks 1 To turn the RES 22XR3 power off press and hold the system power on off button see Figure 2 14 page 2 16 for at least four 4 seconds This will shut down the system and turn off the POWER LED as well as the rear power supply LED As an alternative a modern operating system Windows 9x or newer and Linux for example can turn off the system after a graceful OS software shutdown Themis Computer RES 22XR3 Installation Manual Configuration 4 Version1 0 2 18 Themis Computer Installation Section Chapter BIOS Setup Utility 3 1 3 1 1 Introduction This chapter describes the AMI BIOS Setup Utility for the RES 32XR3 Configura tion 4 motherboard The AMI ROM BIOS is stored in a Flash EEPROM and can be easily updated This chapter describes the basic navigation of the AMI BIOS Setup Utility setup screens Starting BIOS Setup Utility To enter the AMI BIOS Setup Utility screens press the lt Delete gt key while the sys tem is booting up Note In most cases the lt Delete gt key is used to invoke the AMI BIOS setup screen There are a few cases when other keys are used such as lt F1 gt lt F2 gt etc Each main BIOS menu option is described in this manual The Main BIOS setup menu screen has two main frames The left frame displays all the options that can be configur
23. traffic Themis Computer Appendix Rack Mount Slide Installation An optional set of two rack mount slides left side and right side is available for all RES 22 systems and should be ordered at the time of purchase The RES 22XR3 chassis contains six threaded screw holes on each side to accommodate 8 32 size screws included with the rack mount slide kit steel slides require four mounting holes and aluminum slides require three mounting holes see Figure B 1 Mounting Bracket 202 4 424 9 24 9 Legena Screw Hole Size 8 32 Figure B 1 Screw Locations for Rack Mount Slides Dimensions of the screw hole patterns on the sides of the RES 22XR3 chassis for installing rack mount slides are shown in Figure B 1 B 1 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Caution Any screws used to mount a slide to a RES 22 chassis must not exceed a length of 3 8 to prevent excessive penetration of the chassis The rack mount slide installation kit includes the following items a Two inside slide sections b Two outside slide sections c Two front short slide brackets d Two rear long slide brackets e Assorted screws washers and nuts Follow these steps to install a steel rack mount slide to the RES 22XR3 chassis 1 Attach the inside slide section see Figure B 2 on page B 3 to both sides of the RES 22XR3 chassis using four 8 32 screws per side 2
24. two extra ports a The 17 deep RES XR3 chassis actually measures 17 07 deep but for simplicity will continue to be referred to as being 17 deep through out these manuals xxi Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 xxii A matrix describing RES chassis configured for front I O connector and front PCI card access in a 16 deep chassis is given in Table 3 This chassis design makes it more convenient to install cables to the system and demands no access to the rear of the chassis except to replace a fan Figure 2 shows the front view of a standard rear TO RES 22 Figure 3 page xxiii shows the rear view Figure 4 page xxiii shows the front view of a front I O RES 32 chassis Figure 5 shows the rear view Table 3 Front I O 16 Deep Chassis Manual Matrix Geer Dier RES 32XR3 FIO Manual P N RES 22XR3 FIO Manual P N X8DAH F 2 117611 024 X8DTU F 2 117664 024 Naming Key X8uvwxyz System RES x2XR3S and RES x1XR3 where x 3 2 or1 RES 32XR3 FIO motherboard X8DAH F supports both audio and video however the naming key does not contain a T in the title u D Double CPU sockets S Single CPU socket v A Sound chip no graphics chip T Graphics chip no sound chip w Not applicable x i SATA only 3 SAS1 0 i SAS2 0 y LN4 Extra gigabit Ethernet controller for two extra ports z F IPMI blank No IPMI
25. 0 133 MHz mm 2 PCI X 100 133 MH AFIR SPorx133 Mhe 227 4 PCI Express x8 5 PCI Express x4 in x8 slot 6 PCI Express x8 7 SIMLP IPMI hidden by deflector Note PCI Slots 0 and 7 are not accessible through the rear I O slots 60 mm Fan 3 total Eamus 1 j me tt ees ara Pa d CD DVD Storage Drive 1 of 8 Combo Drive Front Housing Figure 1 4 Major Components of RES 22XR3 Configuration 4 Open Top View 1 5 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 1 2 System LEDs and I O Connectors All RES 22XR3 system LEDs are located on the front panel see A Figure 1 5 all T O connectors are located on the rear panel see B Figure 1 5 LEDs are described in Table 1 3 on page 1 7 I O connectors are described in Table 1 5 page 1 9 Front Panel Front Doors Removed tt aa US See H i j LEDs i ewen ENET2 Ce S eek o Storage Power Power NIC1 NIC2 Overheat Power ON OFF A Drives Fail Fail Fan Fail Button PS1 PS2 B Left Power Right Power Emn AAA ENER i 1 KUCKE KAATET TA CIEI HUTT KITT OTT ELLEELLE OL MAMA Bice Ta a a I O Connectors ae PS 2 Mouse ZS PS 2 Keyboard USB1 top 2 VGA LAN Port 1 left USBO bottom Port Port LAN Port 2 right Gigabit Ethernet Figure 1 5 RES 22XR3 System LEDs and I O Connectors X8DTN Motherboar
26. 3 16 Type 3 16 IDE SATA Configuration DMA Mode 3 17 Fourth IDE Master 3 6 IDE Detect Timeout 3 8 Primary IDE Master Slave 3 16 SATA 1 Configuration 3 15 SATA 2 Configuration 3 16 Secondary IDE Master Slave 3 16 Third IDE Master 3 6 Installation procedures 2 installing rack mount slides B memory modules 2 4 PCI cards 2 7 Instructions for Re Packing F 2 Intel 5520 Tylersburg chipset xxiv Intel 5520 chipset 2 Intel PCI X Hub Configuration I O Port Decode 3 15 PCI Bus A0 B0 Frequency 3 14 Index 3 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 RAS Sticky Error Handling 3 15 VGA 16 Bit Decode 3 15 Intel Xeon CPU 1366 pin Intel Xeon CPUs 1366 pin 2 K keys front bezel 19 L LAN port A 4 LANI 12 7 latch locks 1 4 LEDs NIC1 Gb Ethernet 7 NIC2 Gb Ethernet 7 system 1 4 Linux 5 Creating a Custom Layout C 9 Edit Interface Pop Up Screen C 3 Enter Installation Number C 6 Installation Begins C 8 Installation is Complete C 9 Language Selection C 4 Login Screen C 20 Master Boot Record MBR C Network Devices List C 2 Option to Review or Continue C 18 Optional Packages C 17 Package Installation Default Screen C 16 Partitioning C 7 Power On after Linux DVD is Inserted into Drive C 2 Ready to use the Desktop C 20 Reviewing Option C 8 Selecting Layout Type C 5 Selecting Time Zone C 14 Setting Up Boot Loader C 10 Setting Up Root Account and Passwo
27. 4 PIO Mode 4 16 6 MB s 3 3 8 4 DMA Mode Select Auto to allow the BIOS to automatically detect IDE DMA mode when the IDE storage drive support cannot be determined The options are Auto default SWDMAn MWDMAhg and UDMAn See Table 3 2 below for DMA Mode Select Options Table 3 2 DMA Mode Select Options Option Selected DMA Mode Max Transfer Rate SWDMA 0 Single Word DMA 0 2 1 MB s SWDMA 1 Single Word DMA 1 4 2 MB s SWDMA 2 Single Word DMA 2 8 3 MB s MWDMA 0 Multi Word DMA 0 4 2 MB s MWDMA 1 Multi Word DMA 1 13 3 MB s MWDMA 2 Multi Word DMA 2 16 6 MB s UDMA 0 Ultra DMA 0 16 6 MB s UDMA 1 Ultra DMA 1 25 MB s UDMA 2 Ultra DMA 2 33 3 MB s Themis Computer 3 17 RES 22XR3 Installation Manual Configuration 3 Version 1 1 Table 3 2 DMA Mode Select Options Continued Option Selected DMA Mode Max Transfer Rate UDMA 3 Ultra DMA 3 44 4 MB s UDMA 4 Ultra DMA 4 66 6 MB s UDMA 5 Ultra DMA 5 100 MB s UDMA 6 Ultra DMA 6 133 MB s 3 3 8 5 3 3 9 3 3 9 1 3 3 9 2 S M A R T For Storage Drives Self Monitoring Analysis and Reporting Technology SMART can help predict impending drive failures Select Auto to allow the AMI BIOS to automatically detect storage drive support Select Disabled to prevent the AMI BIOS from using the S M A R T Select Enabled to allow the AMI BIOS to use the S M A R T to sup port the storage drive The
28. 4 bit 133 100 MHz PCI X slots 1 2 e One PCl e 2 0 x8 in a UIO slot 0 The RES 22XR3 Configuration 4 is designed within a 2RU high 3 5 form factor 20 50 8 cm deep and 17 43 2 cm wide which with mounting brackets fits a 19 wide rack Major features are listed in Table 1 2 Table 1 2 Major Features of RES 22XR3 Configuration 4 Feature Details Processors CPUs e Two 1366 pin Intel Quad Dual Core 5500 Series or Quad Six Core 5600 Se ries Xeon CPUs up to 6 4 GT s each Chipset e Intel 5520 Tylersburg chipset e ICH10R Southbridge and IOH 36D Memory e Eighteen 18 240 pin DIMMs supporting up to 288 GB 16GB DIMMs of Registered ECC DDR3 1333 1066 800 MHz 72 bit SDRAM Expansion slots e See Table 1 1 for details Rear Panel I O e See Table 1 5 on page 1 9 for details Peripheral Support 6 on board SATA2 devices 5 storage drives and 1 CD ROM drive 1 combination CD RW DVD ROM slimline drive Operating temperature e 0 up to 65 C 32 up to 149 F Shock endurance e 35G 25 msec duration 3 axis Dimensions e 3 5 2RU high 17 43 2 cm wide 19 48 3 cm with mounting brackets 17 43 2 cm deep Rack mount brackets and slides Left and right rack mount tabs are attached to the chassis Left and right rack mount slides are optional Dual power supplies 750 watts each auto ranging 100 265 VAC Load sha
29. AID is selected the item ICH RAID Code Base will appear ICH RAID Code Base This feature is available when RAID is selected Select Intel to enable Intel s SATA RAID firmware to configure Intel s SATA RAID settings Select Adaptec to enable Adaptec s SATA RAID firmware to configure Adaptec s SATA RAID settings The options are Intel default and Adaptec 3 15 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 16 3 3 8 2 3 3 8 3 SATA 2 Configuration This feature is available when IDE is se lected Selecting Enhanced will set SATA 2 to native SATA mode The options are Dis abled and Enhanced default Primary IDE Master Slave Secondary IDE Master Slave Third IDE Master and Fourth IDE Master These settings allow the user to set the parameters of Primary IDE Master Slave Secondary IDE Master Slave Third and Fourth IDE Master slots Hit lt Enter gt to activate the following submenu screen for detailed options of these items Set the correct configurations accordingly The items included in the submenu are Type Select the type of device connected to the system The options are Not Installed Auto default CD DVD and ARMD LBA Large Mode LBA Logical Block Addressing is a method of addressing data on a storage drive In the LBA mode the maximum drive capacity is 137 GB For drive capacities over 137 GB your system must be eguipped with a 48 bit LBA mode addres
30. Ae e megan er erent er ee a Pee eT Or 3 19 3 3 9 6 Slotl1 Slot3 PCI X Option ROM Slot4 Slot6 PCI E Option ROM NEE 3 19 3 3 9 7 Load Onboard LAN1 Option ROM Load Onboard LAN2 Option ROM imiteeenneenenneeeenneee 3 19 3 3 9 8 Onboard LAN Option ROM Select ccc eeesceeseceeeteeeesteeeeees 3 19 3 3 9 9 Boot Graphics Adapter Priority wenrene 3 19 3 3 10 Super IO Device Contre uration E 3 20 3 3 10 1 Onboard Floppy Controller cece eeeceeescceesseceesteceeseeeeesaeeeenee 3 20 3 3 10 2 Serial Port Address Serial Port Address 3 20 is A U8 ere E E 3 20 3 3 11 Remote Access EHNEN a 3 20 JANI RTE 3 20 3311 2 Serial EE 3 21 3 3 11 23 LUO MAE OMAL A alati a E 3 21 3 3 11 4 Redirection After BIOS POST miinaenmeeanneenneenne 3 21 3 3 11 5 Terminal Vy E 3 21 3 3 11 6 VT UTF8 Combo Key Support ssssessseessssessssssessseessssesssresseesse 3 21 3 3 11 7 Sredir Memory Display Delai 3 21 3 3 12 Hardware Health Configuration seseseeeesseessesssessseessseesseessessseeesseesssees 3 21 3 3 12 1 CPU Overheat Alarm 4325cccdsccccdsisceesesnaviscens Qecsateauacesedeavasaanesavens 3 22 3 3 12 2 CPU Temperature 2 CPU Temperature 1 ene Temperature sua ceed ante taunts aed le deli 3 22 3 3 12 3 System Temperatur x sssieieidcsssacisussadevivessede seussintessaeea Re 3 23 3 3 124 Fan Speed WE 3 23 3 3 12 5 Fan Speed Control Monitor
31. ES 22XR3 Configuration 4 motherboards provide the performance and feature sets reguired for dual processor based high end systems including optimal configuration options for communications high end CAD systems presentation storage compu tation or database applications The Intel chipset consists of e the Intel 5520 Tylersburg chipset and e the ICH1 OR IOH 36D With the Intel QuickPath Interconnect QPI controller built in the processor the 5500 5600 Series Processor platform is the first dual processing platform to offer the next generation point to point system interconnect interface replacing the current Front Side Bus Technology providing substantial system performance enhancement by utilizing serial link interconnections allowing for increased bandwidth and scal ability The IOH connects to each processor through an independent QuickPath Interconnect link Each link consists of 20 pairs of unidirectional differential lanes for transmission and receiving in addition to a differential forwarded clock A full width QuickPath interconnect link pair provides 84 signals Each processor supports two QuickPath links one going to the other processor and the other to the 5520 chip The Intel 5520 platform supports up to 36 PCI Express Gen2 lanes and the 5520 North Bridge supports peer to peer read and write transactions The ICHIOR proc vides up to 6 PCI Express ports six SATA ports and 10 USB connections In addi tion the Intel 5520
32. ES 22XR3 Installation Manual Configuration 4 Version1 0 Press latch downward 8 outward at each end Figure 2 4 Memory Module Removal 4 Before inserting a new memory module into the vacant slot make sure that the two latches one at each end are pulled outward away from the center of the slot see Figure 2 4 With the latches in the outward position gently insert the new module verti cally into its slot and press firmly downward until it snaps into place ing the alignment notch at the bottom edge with its counterpart ridge at Note Make sure the memory module has the proper orientation by align the bottom of the slot 5 If all the memory modules have been replaced in the system replace the air flow diverter and secure it with the eight screws previously removed 2 6 Themis Computer 2 Installation and Operation Installation Procedures 2 1 3 PCI Cards The RES 22XR3 Configuration 4 supports the PCI slots indicated in Figure 2 5 All slots support cards up to 12 28 inches long Remember that slots 0 and 7 cannot be accessed theough the rear I O panel Slot 0 1 PCI Express x8 Slot PCI Express x4 Slot PCI U Slot PCI Express x8 Slot Access from motherboard only not from rear I O Panel SIMLP IPMI Slot Lithium Battery PCI X Slot 100 MHz 133 MHz PCI X Slot 100 MHz 133 MHz PCI X Slot 133 MHz MT i A fa s A d n MA A EN Figure 2 5 PCI Card Installation X8DTN Motherboar
33. ES 22XR3 power supply provides output voltages that are split between 3 3V 5V 5V sb 12V and 12V rails Themis Computer 1 Overview and Specifications 1 8 3 1 8 3 1 1 8 3 2 1 8 3 3 Front Sound Baffle Specifications Environmental Shock The RES 22XR3 is designed to survive an elevated shock environment All struc tural components are welded together enabling the system to survive a maximum 3 axis shock load of 25G at 40 ms duration Electrostatic Discharge The RES 22XR3 is designed to tolerate electrostatic pulses up to 15 kilovolts KV with no impact on system operation Noise The RES 22XR3 conforms to the 54 db noise specification It is possible to achieve further noise reduction by installing a sound baffle muffler on both the front see Figure 1 8 and the rear see Figure 1 7 on page 1 18 of the RES 22XR3 chassis Call your Themis representative for additional information Figure 1 6 and Figure 1 7 on page 1 18 illustrate sound baffles installed on a RES 22XR3 chassis Figure 1 6 RES 22XR3 with Front Sound Baffle Installed Front View Note All RES systems are shipped with BIOS fan speed set to the quietest mode The default fan speed control mode of the RES 22XR3 Configuration 4 is Energy Saving ES 1 17 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Front Access Opening the two front doors of the RES 22XR3 reguires removing the fr
34. The options are Yes default and No 3 3 13 2 ACPI Version Features The options are ACPI v1 0 ACPI v2 0 default and ACPI v3 0 Please refer to ACPI s website for further explanation http www acpi info 3 3 13 3 ACPI APIC Support Select Enabled to include the ACPI APIC Table Pointer in the RSDT Root System Description Table pointer list The options are Enabled default and Disabled 3 3 13 4 APIC ACPI SCI IRA When this item is set to Enabled APIC ACPI SCI IRQ is supported by the system The options are Enabled and Disabled default Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations 3 3 13 5 Headless Mode This feature is used to enable system to function without a keyboard monitor or mouse attached The options are Enabled and Disabled default 3 3 13 6 NUMA Support Select Enabled to use Non Uniform Memory Access to improve CPU performance The options are Disabled Enabled default and NUMA for SLES 11 3 3 13 7 ACPI SLIT Table Select Enabled to enable ACPI SLIT System Locality Information Table support to indicate the distances between all processors memory controllers and host bridges The options are Enabled default and Disabled 3 3 13 8 High Performance Event Timer Select Enabled to activate the High Performance Event Timer HPET that produces periodic interrupts at a much higher frequency than a Real time Clock RTC does in synchronizing multimedia streams provi
35. ailable when supported by the CPU imemee 3 8 3 3 3 9 Ee Processor Cores i eet eset Ree ea 3 8 3 3 3 10 Intel BIST Technology E misasi 3 9 3 3 3 11 Intel Turbo Boost Available when Intel EIST Technology is enabled 3 9 E lutel C STATE TEE 3 9 3049195 E 3 9 ix Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 EE CO State RAUKAS ASEN i M AN E M EDE tose 3 9 3 3 3 15 C State package limit setting Available when Intel C State Tech is enabled 3 9 33 9 10 LAU Ree 3 9 3 3 3 17 2CS Plo DEMO oN MLA 3 10 OS ssl O87 Clock Spread Speel rss salu 3 10 3 3 4 Advanced Chipset Control vussi emaks 3 10 3 3 4 1 QPI Quick Path Interconnect Links Speed 3 10 3 3 4 2 OPI Frequency Available if the item QPI Speed is set to Full Speed 3 10 334 3 OPI LOS and eksitas 3 10 SAA Memory HIedUSREK uuu alea ad 3 10 3 34 Memory MOOG summutada 3 11 3 2402 emand Scrubbing aiamaa sad 3 11 3 3 4 7 Patrol Scrubbing gt eege ataman taan kopa 3 11 3 3 4 8 Throttling Closed Loop Throttling Closed Loop 3 11 3 3 5 Northbridge Configuration sues ie iert 3 12 3 3 3 1 Intel VOAT mustlaste 3 12 3 3 5 2 DCA Direct Cache Access mennereneeeoeononnnenneneeee 3 13 33 99 DCA Prefeteh Delay astusin a 3 13 Se EE Ta EE 3 13 3 3 5 5 Active State Power Management cceeeecece
36. ainst crushing and moisture invasion The original packaging is best for this pur pose provided the packaging is retained in serviceable condition If the original packaging is no longer serviceable or no longer available care should be taken in repackaging for shipment so that the equipment is protected from damage in transit Equipment should be wrapped in a moisture resistant covering and placed either in double boxes or in boxes with crush resistant insulation between the equipment and the outer walls of the container If using the original packaging the clear plastic membrane should be placed next to the equipment 1 e up against the bottom or down against the top The following instructions assume the original packing components are still avail able and in serviceable condition F 2 Packing Components The original packing components are shown in Figure F 1 page F 2 They comprise a packing box bottom crush resistant layer and top crush resistant layer The bot tom and top crush resistant layers are identical components placed so that the side F 1 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 with the plastic membrane is against the eguipment AA M KS Membrane Bottom Layer p j lk Figure F 1 Packaging Components F 3 Instructions for Re Packing Re assemble the packing material about the eguipment in accordance with the fol lowing instructions see Figur
37. ake On LAN requires an ATX 2 01 or above compliant power supply Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 1 7 1 14 Super I O Controller The Super VO chip storage drive adapter functions include e a floppy storage drive controller industry standard 82077 765 compatible e a data separator e write pre compensation circuitry e decode logic e data rate selection e clock generator drive interface control logic e interrupt and DMA logic The wide range of functions integrated onto the Super I O greatly reduces the num ber of components required for interfacing with floppy disk drives The Super I O supports 360K 720K 1 2M 1 44M or 2 88M storage drives and data transfer rates of 250 Kb s 500 Kb s or 1 Mb s It also provides two high speed 16550 compatible serial communication ports UARTs Each UART includes a 16 byte send receive FIFO a programmable baud rate generator complete modem control capability and a processor interrupt system Both UARTs provide legacy speed with baud rate of up to 115 2 Kbps as well as an advanced speed with baud rates of 250 K 500 K or 1 Mb s for higher speed modems The Super I O provides functions that comply with ACPI Advanced Configuration and Power Interface which includes support of legacy and ACPI power manage ment through an SMI or SCI function pin It also features auto power management to reduce power consumption The
38. al Temperature Control ssssssesseseesseesssessessseesseessseressessee 1 11 1 5 3 System Resource EE 1 12 1 5 RER 1 12 1 6 1 Slow Blinking LED for Suspend State Indicator mtmne 1 12 1 6 2 Main Switch Override Mechanisme 1 13 1 6 3 Wake On LAN WOL NEE 1 13 Lt Super VO Controller cocsrennsssiniinnssnnnensnn n ne ns 1 14 18 EE 1 15 LSA E EE 1 15 162 VE sus eerus sel luua tass 1 16 1 82 11 REENEN sammas liedukas 1 16 IER et e EE 1 16 1 8 37 EAL OMAGA eege eene eeh 1 17 18 31 eeben abt lai akt Nat li tama 1 17 E e Ee ER EE 1 17 18 e e EE 1 17 1 9 Packaging and te 1 19 Ee i dE 1 19 Themis Computer vii RES 22XR3 Installation Manual Configuration 4 viii 1 9 2 Rack M nt Slides Optional c sj csssssccededesceed uh tuus dot he s tme ad eb ud id k e 1 20 2 Installation and Operation 15 asustamist maamaks mavens 2 1 2b Installation Procedures eessen 2 1 2 1 1 Remove Protective Top Covet viisis jcaiiasaccesatedesccassssacdeaseavaatasoesacsaunaveseaseees 2 1 212 Memory DUCE Ss at etal at Pal ul esta 2 3 GE E e E et 2 4 E EN E EE EE 2 7 ZA Sell Installing e EE 2 7 GN A ere EE 2 8 2 1 4 1 Removing the Lithium Battery msteeteernee 2 8 2 1 4 2 Installing a Lithium Battery 22 aid pihta aada 2 8 GER se SESE E SEALSET EST 2 9 2 1 5 1 Opening the RES 22XR3 Front Doors required for Storage Drive access m
39. al space between each DIMM module Each step is in 1 1000 of an inch The default is 400 default Press or on your keyboard to change this value Northbridge Configuration This feature allows the user to configure the settings for the Intel North Bridge chip Intel O AT This feature works in conjunction with the Intel I O AT Acceleration Technology to accelerate the performance of TOE devices Note A TOE device is a specialized dedicated processor that is installed on an add on card or a network card to handle some or all packet processing of this add on card When this feature is set to Enabled it will enhance overall system performance by providing direct memory access for data transferring The options are Enabled default and Disabled Themis Computer 3 BIOS Setup Utility 3 3 5 2 3 3 5 3 3 3 5 4 3 3 5 5 3 3 5 6 3 3 6 Advanced Setup Configurations DCA Direct Cache Access This feature works in conjunction with the Intel I O AT Acceleration Technology to accelerate the performance of the TOE device When this feature set to Enabled it will enhance overall system performance by providing direct cache access for data transferring The options are Enabled default and Disabled DCA Prefetch Delay A DCA Prefetch is used with TOE components to prefetch data in order to shorten execution cycles and maximize data processing efficiency Prefetching too fre quently can satu
40. and LED on the RES 22XR3 Rear 2 3 2 Turning the System On 1 Plug the AC power cord from each of the RES 22XR3 Configuration 4 power supplies into a live AC outlet 2 On the front of the RES 22XR3 push the system power on off button see Figure 2 14 This will cause the system POWER LED to light green as well as the power LED on each power supply to light green Power LED Ay su MGS See ee i FS Figure 2 14 System Power Button and LED on the RES 22XR3 Front System Power On Off Button 2 16 Themis Computer 2 Installation and Operation Operation 2 3 3 Getting Started 2 3 3 1 Configuration 1 Make sure all storage drives are installed see Storage Drives on page 2 9 Drive ID numbers are shown in Figure 1 3 on page 1 4 Chapter 1 Changes may be made through the BIOS 2 Make sure that a graphics card is installed in a PCI Express slot see Figure 2 5 on page 2 7 and connect a multiscan monitor to the SVGA or DVI connector 3 Attach a PS 2 keyboard and mouse to the appropriate connectors on the rear T O panel of the RES 22XR3 Configuration 4 see Figure 1 5 on page 1 6 4 Turn the system on see previous section 2 3 3 2 Linux Installation The subject of installing the Linux operating system onto the RES 22XR3 is detailed in Appendix C Red Hat Enterprise Linux 5 Installation 2 3 4 Turning the System Off Caution Before turning your system off make sure
41. ard X8DAH F supports both audio and video however the naming key does not contain a T in the title w H Two Tylersberg Northbridge chips blank One Tylersberg Northbridge chip U Motherboard with cutout SAS 1 0 i 3 6 SAS 2 0 y LN4 Extra gigabit Ethernet controller for two extra ports z F IPMI blank No IPMI SATA only a All motherboards measure 12 W x 13 L except X8DTN and X8DAH F which are 13 68 W x 13 L XX Themis Computer Preface Table 2 RES x2XR3S RES x1XR3 17 Deep Chassis Manual Matrix Mother G RES 32XR3S RES 22XR3S RES 12XR3S RES 31XR3 RES 21XR3 RES 11XR3 board kets Manual P N Manual P N Manual P N Manual P N Manual P N Manual P N X8DTL 6F 2 117408 024 117412 024 117416 024 X8DTL 6 E 2 117409 024 117413 024 117417 024 X8DTL 3 ite 2 117410 024 117414 024 117418 024 X8DTL i unas 2 117411 024 117415 024 117419 024 X8DAL i X8SAX 1 117420 024 117421 024 ti 1 117385 024 117422 024 X8STE X8STi eg 1 118188 024 117423 024 X8STi LN4 X8STi 3F Naming Key X8uvwxyz u V blank No IPMI D Double CPU sockets S Single CPU socket A Sound chip no graphics chip T Graphics chip no sound chip Not applicable le SATA only 3 SAS1 0 6 SAS2 0 F IPMI System RES x2XR3S and RES x1XR3 where x 3 2 or 1 LN4 Extra gigabit Ethernet controller for
42. are Disabled default and Enabled Memory Frequency This feature forces a DDR3 frequency slower than what the system has detected Select Force SPD Serial Presence Detect to force the module to run at a frequency specified on the SPD table The options are Auto default Force DDR 800 Force DDR 1066 Force DDR 1333 and Force SPD Themis Computer 3 BIOS Setup Utility 3 3 4 5 3 3 4 6 3 3 4 7 3 3 4 8 Advanced Setup Configurations Memory Mode The options are Independent default Channel Mirror and Lockstep e Independent All DIMMs are available to the operating system e Channel Mirror The motherboard maintains two identical copies of all data in memory for redundancy Lockstep The motherboard uses two areas of memory to run the same set of operations in parallel Demand Scrubbing A memory error correction scheme where the Processor writes corrected data back into the memory block from where it was read by the Processor The options are Enabled and Disabled default Patrol Scrubbing A memory error correction scheme that works in the background looking for and correcting resident errors The options are Enabled default and Disabled Throttling Closed Loop Throttling Closed Loop Throttling improves reliability and reduces power in the processor by automatic voltage control during processor idle states Available options are Disabled and Enabled default If Enabled the following items wil
43. ate BIOS y n y iets Bete aaa Der Begin remote BIOS flash y n y Cae eee Se EE Starting remote flash tajate jala Rie Upload new BIOS file using XModem protocol 5 Following the instructions given on the screen to update the BIOS These instructions are also shown below a Atthe prompt press the lt SpaceBar gt to update the BIOS b When asked to confirm BIOS updating press lt y gt to confirm BIOS up dates c Press lt y gt again to begin flashing BIOS remotely Note Be sure to complete Steps a c above quickly because you have a second or less to do so 6 Once you ve completed the instructions given a screen will display to indicate that remote flashing is starting and the new BIOS file is being uploaded 3 35 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 7 To use Hyper Terminal to transfer the XModem protocol by using the Send File dialog under the Transfer menu follow the instructions below to com plete XModem transfers a Select the Transfer menu and enter lt Send gt AMI FLSH HyperTerminal File Edit View Call BG Help 5 METE Receive File Capture Text Send Text File k Press lt Spa ke remote BIOS flash Regi n remo Capture to Printer d v n y Starting remote flash Upload new BIOS file using Xmodem protocol S5335 Figure 3 6 AMI_FLSH HyperTerminal b Specify the locatio
44. ation 3 6 Processor and Clock Options 3 7 Remote Access Configuration 3 20 Southbridge Configuration 3 13 Super IO Device Configuration 3 20 Trusted Computing 3 25 Boot Configuration 3 29 Boot Device Priority 3 29 CD DVD Drives 3 30 Network Drives 3 30 Removable Drives 3 29 Storage Drives 3 30 USB Drives 3 30 Changing Configuration Data 3 2 Exit Options 3 31 Discard Changes 3 32 Discard Changes and Exit 3 31 Load Fail Safe Defaults 3 32 Load Optimal Defaults 3 32 Save Changes and Exit 3 31 hot keys 3 2 Introduction 3 Main BIOS Setup 3 3 QPI Links Speed 3 0 Security Settings 3 27 Boot Sector Virus Protection 3 28 Change Supervisor Password 3 27 Change User Password 3 28 Clear User Password 3 28 Password Check 3 28 Supervisor Password 3 27 User Password 3 27 Starting the Setup Utility 3 2 Index 2 System Overview 3 3 Processor 3 4 Super micro X8DTN 3 4 System Memory 3 4 System Time System Date 3 3 View BMC System Event Log 3 26 BIOS Warning 3 2 BOOT Features AddOn ROM Display Mode 3 6 Bootup Num Lock 3 6 Hit Del Message Display 3 6 Interrupt 19 Capture 3 6 Quick Boot 3 5 Quiet Boot 3 5 Wait For FU If Error 3 6 Boot Settings Screen 3 29 3 31 C Cautions xxv CD RW DVD ROM drive 1 2 1 4 Chipset 2 Chipset Overview 7 11 COM1 COM2 serial port header 9 Comments xxiv components major 5 Configuration 4 motherboard Configuration system 2 17 CPU Overheat Alarm The Default Alarm 3 22 The Ea
45. attery e Rack mount brackets and slides e How to turn the RES 22XR3 Configuration 4 on and off 2 1 Installation Procedures components Wear an antistatic wrist strap and use an ESD protected mat Store ESD sensitive components in antistatic bags before placing them on any surface Handle all IC cards by the front panel or edges only H Caution Use industry standard ESD grounding technigues when handling all To install or replace a SAS SATA2 storage drive fan or power supply skip the next section and proceed directly to page 2 9 or page 2 13 respectively Replace ment of motherboard components require removal of the protective cover 2 1 1 Remove Protective Top Cover To access a motherboard component open the RES 22XR3 as follows Themis Computer RES 22XR3 Installation Manual Configuration 4 Version1 0 1 Loosen the two captive Phillips screws holding the protective top access cover to the rear of the RES 22XR3 chassis see A Figure 2 1 2 Both the front and sides of the cover have flat hooks or tabs underneath that fit under slots on the chassis top edges see B Figure 2 1 Remove the cover by sliding it toward the rear until it is free of these chassis slots 3 Store the cover in a safe place until it is replaced eT Me Sees cael Hoe os en A Loosen the 2 captive access cover screws Rear View Chassis slot Chassis slot Left side top edge B and slide the top cove
46. blication may be reproduced in any form by photocopy microfilm retrieval system or by any other means now known or hereafter invented without the prior written permission of Themis Computer The information in this publication has been carefully checked and is believed to be accurate However Themis Computer assumes no responsibility for inaccuracies Themis Computer retains the right to make changes to this publication at any time without prior notice Themis Computer does not assume any liability arising from the application or use of this publication or the product s described herein RESTRICTED RIGHTS LEGEND Use duplication or disclosure by the United States Government is subject to the restrictions set forth in DFARS 252 227 7013 c 1 i and FAR 52 227 19 TRADEMARKS and SERVICEMARKS Themis is a registered trademark of Themis Computer Inc Intel and Xeon are registered trademarks of Intel Corporation Red Hat is a registered trademark of Red Hat Inc Linux is a registered trademark of Linus Torvalds SuperMicro is a registered trademark of Super Micro Computer Inc All other trademarks servicemarks or registered trademarks used in this publication are the property of their respective owners CE Marking CE This product complies with the European EMC Directive 2004 108 EC and the European Low Voltage Safety Directive 2006 95 EC Safety Precautions Instructions regarding safety precautions d
47. c or Microsoft s TLDR Unless you want to set up a Boot Loader Password or Configure Advanced Boot Loader Options see Figure C 10 on page C 10 C 9 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 C 10 RED HAT ENTERPRISE LINUX 5 The GRUB boot loader will be installed on devisda No Boot loader will be installed You can configure the boot loader to boot other operating systems it will allow you to select an operating system to Boot feom the list To add additional operating systems which are not automatically detected click Add To change the operating system booted by default select Default by the desired operating system Default Label Device Add Red Hat Enterprise Linux Server Mev VoiGroup00 Logvel00 Edit Qelete A boot loader password prevents users from changing options passed to the kernel For greater system security it is recommended that you set a password Use a boot loader password Contigure advanced boot loader options B Retease Notes Back Se Next Figure C 10 Setting Up Boot Loader To configure more advanced boot loader options such as changing the drive order or passing options to the kernel be sure Configure advanced boot loader options is selected before clicking Next Step 11 Now that you have chosen which boot loader to install you can also deter mine where you want the boot loader to be installed You may install the boot loader
48. cate that the CPU is in suspend mode When the user presses any key the CPU will wake up and the LED will automatically stop blinking and remain on Themis Computer 1 Overview and Specifications 1 6 2 1 6 3 ACPI Features Main Switch Override Mechanism When an ATX power supply is used the power button can function as a system sus pend button to make the system enter a SoftOff state The monitor will be suspended and the hard drive will spin down Pressing the power button again will cause the whole system to wake up During the SoftOff state the ATX power supply provides power to keep the required circuitry in the system alive In case the system mal functions and you want to turn off the power just press and hold the power button for 4 seconds This option can be set in the Power section of the BIOS Setup routine Wake On LAN WOL Wake On LAN is defined as the ability of a management application to remotely power up a computer that is powered off Remote PC setup up dates and asset track ing can occur after hours and on weekends so that daily LAN traffic is kept to a min imum and users are not interrupted The motherboard has a 3 pin header WOL to connect to the 3 pin header on a Network Interface Card NIC that has WOL capa bility In addition an onboard LAN controller can also support WOL without any connection to the WOL header The 3 pin WOL header is to be used with a LAN add on card only J Note W
49. certain tests during POST to reduce the time needed for system boot The options are Enabled default and Disabled 3 3 1 2 Quiet Boot This option allows the bootup screen options to be modified between POST mes sages or the OEM logo Select Disabled to display the POST messages Select Enabled to display the OEM logo instead of the normal POST messages The options are Enabled default and Disabled 3 5 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 6 3 3 1 3 3 3 1 4 3 3 1 5 3 3 1 6 3 3 1 7 3 3 2 3 3 2 1 AddOn ROM Display Mode This sets the display mode for the Option ROM Select Keep Current to use the cur rent AddOn ROM Display setting Select Force BIOS to use the Option ROM dis play mode set by the system BIOS The options are Force BIOS default and Keep Current Bootup Num Lock This feature selects the Power on state for Numlock key The options are Off and On default Wait For EI If Error This forces the system to wait until the F1 key is pressed if an error occurs The options are Disabled and Enabled default Hit Del Message Display This feature displays Press DEL to run Setup during POST The options are Enabled default and Disabled Interrupt 19 Capture Interrupt 19 is the software interrupt that handles the boot drive function When this item is set to Enabled the ROM BIOS of the host adaptors will capture Interrupt 19 at boo
50. ck H EHR H Slot 1 AG Power Socket MM 3 prong NEMA 11 HIH JAHE ak G PCI Express 2 0 x8 slot Rear I O Panel see Figure 1 5 page 1 6 i PCI Express x4 in a x8 slot slot PCI Express 2 0 x8 slot Figure 1 3 External Features of the RES 22XR3 Front and Rear The RES 22XR3 front panel houses eight storage drive bays to accomodate up to eight removable storage drives The motherboard supports up to 6 SATA2 devices both storage drives and the DVD ROM combo drive but more devices may be added by installing an optional SATA or SAS controller card in an available PCI slot of the system Storage drive requirements should be specified at the time of pur chase Also included on the front panel are a combination CD RW DVD ROM Slimline drive an ON OFF power switch and system LEDs see Figure 1 5 on page 1 6 The rear panel contains I O faceplates for six PCI cards graphics RAID NIC etc two AC power supplies with latch locks and power cord sockets and all the I O con nectors see Figure 1 5 Themis Computer 1 Overview and Specifications Overview Major features of the RES 22XR3 are described in Table 1 2 page 1 2 Major inter nal components can be seen in the open top view cover removed of Figure 1 4 Power Supply 1 of 2 Air Flow Deflector 18 DIMM Memory Modules and 2 CPUs underneath Rear I O Slots 1 to 6 tf ga ZE PCI Slot 0 PCI U UIO i Biet d PCI Slot 1 PCI X 10
51. d 2 1 3 1 Installing Cards Perform the following steps to install a PCI card 1 Locate the slot within which a card will be installed see A Figure 2 5 and remove the Phillips screw holding the blank I O panel see B Figure 2 5 2 Remove the blank I O panel and install the new card securing its I O faceplate with the Phillips screw removed in Step 1 3 Carefully install each new card into the appropriate slot repeating Step 1 and Step 2 until all the cards have been installed 4 Attach any internal I O cables to the installed PCI cards and carefully fold and tuck any exposed ribbon cables into the cabinet 5 If you have no further installations to perform close the RES 22XR3 chassis by refastening the top cover removed in Step 1 on page 2 2 2 7 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version1 0 2 1 4 Lithium Battery 2 1 4 1 Removing the Lithium Battery Perform the following steps to remove the lithium battery 1 Make sure the system is powered off see Operation on page 2 16 2 Locate the lithium battery socket and squeeze the latch see A Figure 2 6 to gether until the battery lifts out of its socket Note The battery location is dependent on which motherboard is in stalled in the chassis Figure 2 5 on page 2 7 shows the location of the bat tery on the X8DTN motherboard 3 Remove the old battery and replace with a new battery see next section A eS A GER
52. d 1 6 Themis Computer 1 Overview and Specifications System LEDs and I O Connectors Table 1 3 System LEDs LED Description Power e Indicates that the system is turned on Storage Drive e Indicates SAS SATA2 storage drive activity Power Fail Left Power Supply e Warns that there is a failure in the left power supply Power Fail Right Power Supply e Warns that there is a failure in the right power supply eech NIC12 Gb Ethernet e Indicates network activity on LAN 1 pas NIC2 Gb Ethernet e Indicates network activity on LAN 2 O DS CH Overheat Fan Fail Normally OFF RED light when tem perature limits are ex ceeded e Warns that the system is exceeding specified temperature parameters The CPU overheat warning function must be enabled in the BIOS thus allowing the user to define an overheat temperature which when exceeded trig gers the overheat warning LED Symbol Rear Panel LED s Description Each Ethernet port contains two LEDs e The color of the left LED when facing the port indicates the LAN connection speed N A LAN1 and LAN2 Off 10 MHz Green 100 MHz Amber 1 GHz e The right LED when lit indicates LAN activity a NIC Network Interface Controller Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 1 8 Table 1 4 Pow
53. d in HH MM SS format Note The time is in the 24 hour format For example 5 30 P M appears as 17 30 00 3 3 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 2 1 2 Super micro X8DTN e BIOS Build Version This item displays the BIOS revision used in your sys tem e BIOS Build Date This item displays the date when this BIOS was completed 3 2 1 3 Processor The AMI BIOS will automatically display the status of the processor used in your system e CPU Type This item displays the type of CPU used in the motherboard e Speed This item displays the speed of the CPU detected by the BIOS e Physical Count This item displays the number of processors installed in your system as detected by the BIOS e Logical Count This item displays the number of CPU Cores installed in your system as detected by the BIOS e Logical Count This item displays the number of CPU Cores installed in your system as detected by the BIOS 3 2 1 4 System Memory This displays the size of memory available in the system e Size This item displays the memory size detected by the BIOS 3 4 Themis Computer 3 BIOS Setup Utility 3 3 Advanced Setup Configurations Use the arrow keys to select Boot Setup and hit lt Enter gt to access the submenu items TOS SETUP UTILITY Figure 3 2 BIOS Setup Utility Screen 3 3 1 BOOT Features 3 3 1 1 Quick Boot If Enabled this option will skip
54. ding smooth playback and reducing the dependency on other timestamp calculation devices such as an x86 RDTSC Instruc tion embedded in the CPU The High Performance Event Timer is used to replace the 8254 Programmable Interval Timer The options are Enabled default and Dis abled 3 3 13 9 WHEA Support Select Enabled to enable Windows Hardware Error Architecture WHEA support which will provide a common infrastructure for handling hardware errors on Win dows platforms in order to reduce system crashes due to hardware errors and improve system recovery and health monitoring The default setting is Enabled 3 3 14 Trusted Computing Available when a TPM device is installed on the motherboard 3 3 14 1 TCG TPM Trusted Platform Module Support Select Yes on this item and enable the TPM jumper on the motherboard to enable TCG TPM 1 1 1 2 TPM support in order to improve data integrity and network security The options are No default and Yes If this feature is set to Yes the fol lowing items will display 3 25 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 Execute TPM Command Select Enabled to execute TPM commands vou ve selected Select Don t change to keep the current TPM commands without making any changes Select Disabled to abandon the changes you have made on TPM commands The options are Enabled Disabled and Don t Change default TPM Enable Disable Status This item display
55. e F 2 on page F 3 e Inspect the original packing materials for serviceability e Place one crush resistant layer open side down membrane side up in the bot tom of the box Themis Computer F Re Packing Instructions Instructions for Re Packing e Place the equipment on top of the bottom layer right side up e Place the other crush resistant layer membrane side down open side up on top of the equipment e Press down on the top layer to firmly compress the layers around the equip ment and allow for the box flaps to be closed e Seal the top of the box with strong packing tape wrapping the tape completely around the box both lengthwise and crosswise e Prepare for shipment in accordance with the instructions received from Themis Computer Figure F 2 Order of Assembly F 3 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 F 4 Themis Computer Index Numerics AMI FLSH HyperTerminal Screen 3 36 19 rack xxiv antistatic bags 2 240 pin DIMM sockets 1 2 antistatic wrist strap 2 2RU form factor 1 2 audio connectors E 3 32 Bit Data Transfer 3 18 Audio USB Serial Port Custom Module E 5520 chipset 1 10 COM 1 Serial Connector Pinout EA COM1 Serial Connector Pinout Signal 60 mm fan housing 2 Descriptions E 5 A header connectors E 3 AC T O cables E 2 power cord 1 19 2 16 I O headers E 2 power LED 2 17 installation E 2 power socket 2 6 ord
56. e Order button if you would like to rearrange the drive order or if your BIOS does not return the correct drive order Changing the drive order may be useful if you have multiple SCSI adapters or both SCSI and IDE adapters and you want to boot from the SCSI device Click Next Step 12 The installation program automatically detects any network devices you have and displays them in the Network Devices list see Figure C 12 on page C 12 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 RED HAT ENTERPRISE LINUX 5 Network Devices Active on Boot Device iPv4 Netmask 1Pv Prefix Edit Hostname Set the hostname automatically via DHCP 4 manually rmhelS tocaidomain eg host domain com Miscellaneous Settings C peiense Notes pack eben Figure C 12 Network Devices List Step 13 Once you have selected a network device click Edit From the Edit Inter face pop up screen you can choose to configure the IP address and Netmask for IPv4 Prefix for IPv6 of the device via DHCP or manually if DHCP is not selected and you can choose to activate the device at boot time If you select Activate on boot your network interface is started when you boot see Figure C 13 on page C 13 If you do not have DHCP client access or you are unsure what to provide here please contact your network administrator C 12 Themis Computer C Red Hat Enterprise Linux 5 Installation Installa
57. e adequate airflow to your system System Resource Alert This feature is available when used with Supero Doctor II in the Windows OS envi ronment or used with the Supero Doctor II in Linux Supero Doctor is used to notify the user of certain system events For example you can also configure Supero Doc tor to provide you with warnings when the system temperature CPU temperatures voltages and fan speeds go beyond a pre defined range 1 6 1 6 1 ACPI Features ACPI stands for Advanced Configuration and Power Interface The ACPI specifica tion defines a flexible and abstract hardware interface that provides a standard way to integrate power management features throughout a PC system including its hard ware operating system and application software This enables the system to auto matically turn on and off peripherals such as CD ROMs network cards storage drives and printers In addition to enabling operating system directed power management ACPI pro vides a generic system event mechanism for Plug and Play and an operating system independent interface for configuration control ACPI leverages the Plug and Play BIOS data structures while providing a processor architecture independent imple ment that is compatible with Windows XP Windows 2003 Windows 2008 Windows Vista Operating Systems Slow Blinking LED for Suspend State Indicator When the CPU goes into a suspend state the chassis power LED will start blinking to indi
58. e and the right thumb on the left side of the power supply locking lever Figure 2 11A 3 With the left hand underneath squeeze the locking lever toward the extraction handle and firmly pull the power supply from the chassis Knurled captive Phillips screw a l j Knurled captive Phillips screw gt gt Power supply locking bracket _ A Remove power supply locking bracket B then disengage locking lever and remove power supply Phillips Screw Hole for knurled captive screw Power Supply on power supply bracket Power LED Locking Lever Phillips Screw Hole for knurled captive screw on power supply bracket 4 IP on Extraction Handle AC Outlet Figure 2 11 The RES 22XR3 Power Supply Locking Mechanism 2 13 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version1 0 Caution When pulling the power supply from the chassis hold it at the bot tom to prevent it from falling and damaging the unit 2 1 7 2 Installing a Power Supply Perform the following steps to install a power supply 1 Insert the replacement power supply into an empty slot with the extraction handle facing to the left see Figure 2 11 2 Push the power supply carefully into its slot until it is firmly seated a click will be heard when the locking lever is securely fastened to the chassis 3 Replace and tighten the two captive screws to hold the power supply locking
59. e flow control for Console Redirection The options are None default Hardware and Software 3 3 11 4 Redirection After BIOS POST Select Disabled to turn off Console Redirection after Power On Self Test POST Select Always to keep Console Redirection active all the time after POST J Note The setting stated above may not be supported by some operating systems Select Boot Loader to keep Console Redirection active during POST and Boot Loader The options are Disabled Boot Loader and Always default 3 3 11 5 Terminal Type This feature allows the user to select the target terminal type for Console Redirec tion The options are ANSI default VT100 and VT UTF8 3 3 11 6 VT UTF8 Combo Key Support A terminal keyboard definition that provides a way to send commands from a remote console Available options are Enabled default and Disabled 3 3 11 7 Sredir Memory Display Delay This feature defines the length of time in seconds to display memory information The options are No Delay default Delay 1 Sec Delay 2 Sec and Delay 4 Sec 3 3 12 Hardware Health Configuration This feature allows the user to monitor system health and review the status of each item as displayed 3 21 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 3 12 1 CPU Overheat Alarm This option allows the user to select the CPU Overheat Alarm setting which deter mines when the CPU OH alarm will be activated
60. e the mains cable supplied e The unit is completely disconnected from the power source only when the power cord is disconnected from the power source Therefore the power cord and its connectors must always remain easily accessible e Do not set up the device in the proximity of heat sources or in a damp location Make sure the device has adequate ventilation e All plugs on the connection cables must be screwed or locked to the chassis housing e The device is designed to be used in horizontal position only e The device is no longer safe to operate when the device has visible damage or the device no longer functions e In these cases the device must be shut down and secured against unintentional operation e Repairs may only be carried out by a person authorized by Themis Computer e The device may only be opened for the installation and removal of extension PCI cards memory modules storage drives fan housings power supplies Themis Computer Safety Instructions RES 22 and RES 22 systems only and the lithium battery all in accordance with the instructions given in this manual e If extensions are made to the device the legal stipulations and the device spec ifications must be observed e The device must be switched off when removing the top cover for example before installing extension PCI cards Operation of Laser Source Devices DVD CD ROM drives contain laser light emitting diodes clas
61. ed Grayed out options cannot be configured Options in blue can be config ured by the user The right frame displays the key legend Above the key legend is an area reserved for a text message When an option is selected in the left frame it is highlighted in white Often a text message will accompany it 2 1 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 J J 3 1 2 3 1 3 Note The AMI BIOS has default text messages built in SuperMicro retains the option to include omit or change any of these text messages The AMI BIOS Setup Utility uses a key based navigation system called hot keys Most of the AMI BIOS setup utility hot keys can be used at any time during the setup navigation process These keys include lt F1 gt lt F10 gt lt Enter gt lt ESC gt arrow keys etc Note Options printed in Bold are default settings How To Change the Configuration Data The configuration data that determines the system parameters may be changed by entering the AMI BIOS Setup utility This Setup utility can be accessed by pressing lt Del gt at the appropriate time during system boot Note For AMI BIOS Recovery please refer to the AMI BIOS Recovery Instruc tions posted on the SuperMicro website at http www supermicro com sup port manuals Starting the Setup Utility Normally the only visible Power On Self Test POST routine is the memory test As the memory is being te
62. ee C 18 Figure C 19 Installation Begins 14444 isccisetsesisacvsszcsiscecadiausevadeasssacianapaszantscvaacuaubavacsebetenacedaaves C 18 Figure C 20 Installation is Complete jocciscecscscbicetitecenigecosparies ncaa does ieee ete pa the C 19 Fisure C20 Torm Eed C 20 Figure C 22 Ready to use the Desktop cscssscsssscsscssstecsnccsscceecasenssesssessncesacsenssssnecsses C 20 Figure D 1 Remote On Off Switch Module D 1 Figure E 1 RES Audio USB Serial Port Custom Module E 1 Figure E 2 Install the RES Audio USB Serial Port Custom Module E 2 Figure E 3 Attach the Appropriate I O Cables enne E 3 Figure E 4 Dual USB Connector Pinouts e nnaneennnnnnee E 4 Figure E 5 COMI Serial Connector Pindis ua dee Ee E 5 Figure E 6 Stereo Audio Connector Pinout enne E 6 Figure F 1 Packaging Components enne F 2 Figure F 2 Order of ASSEMBIV gie eg Kette E el ng Eed EE astmat aa F 3 List of Tables Table 1 RES x2XR3 20 Deep Chassis Manual Matrix ieteeeenneeoeneeeonneee XX Table 2 RES x2XR3S RES x1XR3 17 Deep Chassis Manual Matrix xxi Table 3 Front I O 16 Deep Chassis Manual Matz xxii Table 1 1 RES 22XR3 Configuration 4 Motherboard Options cee ceeeeeseeeseeeeeeeees 1 2 Table 1 2 Major Features of RES 22XR3 Configuration A 1 2 Table 1 3 e EED EE 1 7 Table 1 4 Power Supply LED Behavior AU Sa 1 8 Table 1 5 NR 1 9 Themis Computer xvii RES 22XR3 Insta
63. eececeseeeesteeeeees 3 13 3 3 5 6 IOH PCIE Max Payload Size 4 54 kihte Ee ee 3 13 3 3 6 Southbridge Configuration assesment laastama 3 13 3 30 USB PUNGHONS eher g ieren eer elei EEEo ihkad kate 3 14 350 2 Legacy USB Support sessioissa Keele Eege lee 3 14 ter USB 2 OC OMTOISE ee Sula E 3 14 3 3 6 4 USB 2 0 Controller Mode a 3150139 47 aasia v i he 3 14 3 3 6 5 BIOS EHCI Hand Off amt aaa 3 14 3 3 7 Intel PCI X Hub Configuration eer kaka oa ees 3 14 3 3 7 1 PCI Bus A0 BO Fregquenty ag engt 3 14 3 3 1 MO Port Decode si vivetirtdisaistiavadvakvira annavad a E ES 3 15 3 3 7 3 RAS Row Address Strobe Sticky Error Handling 3 15 33 74 VGA Let Decode at IN 3 15 3 3 8 IDE SATA Configuration weoenreeonnneoeneneoonnneeonneeeenneeeeneeeeenee 3 15 3 3 8 1 SATAFI Configuration emeeenneoenneoeneneoennneeeeneee enne 3 15 3 3 8 2 SATA 2 Configuration This feature is available when IDE is selected 3 16 Themis Computer Table of Contents 3 3 8 3 Primary IDE Master Slave Secondary IDE Master Slave Third IDE Master and Fourth IDE Master 3 16 93 84 DMA Mode s itta taitsa ide ika elada laenata ah dae 3 17 3 3 8 5 IDE Detect Timeout sec BEE 3 18 3 3 9 PCI PnP Configuration senica n e e 3 18 IIT Clea E EE 3 18 23992 Pine ce Play Od aE ala 3 18 5529 3 PCL Latency tee erte ee led ches te dacs Seenen ett 3 19 S394 PCLIDE B sM ster eege eege eege Silja ket 3 19 EL
64. emis Computer 3 BIOS Setup Utility 3 BIOS Recovery A Caution Do not upgrade the BIOS unless your system has a BIOS related issue Flashing the wrong BIOS can cause irreparable damage to the system In no event shall SuperMicro be liable for direct indirect special incidental or consequential damages arising from a BIOS update If you need to update the BIOS do not shut down or reset the system while the BIOS is updating This is to avoid possible boot failure 3 7 1 How to Recover the AMIBIOS Image the Main BIOS Block An AMIBIOS flash chip consists of a boot sector block and a main BIOS code block a main BIOS image The boot sector block contains critical BIOS code including memory detection and recovery code to be used to flash a new BIOS image if the original BIOS Image is corrupted When the system is powered on the boot sector code executes first Once it is completed the main BIOS code will con tinue with system initialization and complete the bootup process Note BIOS Recovery described below is used when the main BIOS block crash es However when the BIOS Boot sector crashes you will need to send the moth erboard back to SuperMicro for RMA repairs Boot Sector Recovery from a USB Device This feature allows the user to recover a BIOS image using a USB device without additional utilities needed A user can download the BIOS image into a USB flash device and name the file SUPER ROM
65. er Supply LED Behavior Symbol LED Power System LED Description Power Fail LED e f system is powered on e On Left Power Supply warns that the upper power Ci red LED i supply has failed or has Note system is powered on lost AC input Power Fail LED e f system is powered on e On Right Power Supply warns that the lower power Ci red LED i supply has failed or has Note system is powered on lost AC input le e System is powered on and Ca power supply modules are 4 Power Fail LED functioning normally or kad Off Left 8 Right Power supply system has been shut i Note system is powered on down and there has been e no interruption to the AC ff power Ie e AC power has been inter 4 A rupted to both power sup 3 On ee ply modules When power Left or Right Power Supply Or red LED S g Se is restored but system is e POLES yen IS POMME still off one of the two indi A cator lights will be lit Z Go Green LED e System is receiving DC Power Supply Modules green LED adjacent to AC input Note system is powered on power 3 3V 5V 12V from the power supply module Off Green LED adjacent to AC input Note system is powered off e System is off and not re ceiving DC power from the Power Supply module a This LED behavior indicates only that AC power has interrupted to both power s
66. er to specify the boot sequence from available Removable Drives The settings are Ist boot device 2nd boot device and Disabled e Ist Drive 1st Floppy Drive e 2nd Drive USB XXXXXXXXX 3 29 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 5 3 3 5 4 3 5 5 3 5 6 3 5 6 1 Storage Drives This feature allows the user to specify the boot sequence from all available storage drives The settings are Disabled and a list of all storage drives that have been detected i e 1st Drive 2nd Drive 3rd Drive etc CD DVD Drives This feature allows the user to specify the boot sequence from available CD DVD Drives The settings are Disabled and a list of CD DVD devices as detected 1 e Ist Drive 2nd Drive etc USB Drives This feature allows the user to specify the boot sequence from all available USB devices The settings are Disabled and a list of USB devices as detected Network Drives This feature allows the user to specify the boot sequence from all available network drives The settings are Disabled and a list of network devices as detected Retry Boot Devices Select Enabled to enable Retry Boot Devices support to allow the system to attempt to boot from a specific boot device after a boot failure The options are Enabled and Disabled default Themis Computer 3 BIOS Setup Utility 3 6 Exit Options Select the Exit tab from the AMI BIOS Setup Util
67. ering if Windows 2000 or an earlier version of Windows OS is used The options are Mod ern Ordering default and Legacy Ordering Intel Virtualization Technology Available when supported by the CPU Select Enabled to use the feature of Virtualization Technology to allow one platform to run multiple operating systems and applications in independent partitions creat ing multiple virtual systems in one physical computer The options are Enabled default and Disabled Note If there is any change to this setting you will need to power off and restart the system for the change to take effect Please refer to Intel s website for detailed information Execute Disable Bit Capability Available when supported by the OS and the CPU Set to Enabled to enable the Execute Disable Bit which will allow the processor to designate areas in the system memory where an application code can execute and where it cannot thus preventing a worm or a virus from flooding illegal codes to overwhelm the processor or damage the system during an attack The default is Enabled default Refer to Intel and Microsoft Web Sites for more information Simultaneous Multi Threading Available when supported by the CPU Set to Enabled to use the Simultaneous Multi Threading Technology which will result in increased CPU performance The options are Disabled and Enabled default Active Processor Cores Set to Enabled to use a processor s Second Core a
68. ering E 7 power supply 1 4 PCB and Carrier E accessory kit 1 19 rear audio connectors E 3 ACPI Configuration Stereo Audio Connector Pinout E 6 ACPI APIC Support 3 24 Stereo Audio Out Connector Pinout Signal ACPI Aware O S 3 24 prion ie ACPI SLIT Table 3 25 Stereo Audio Out jack E 6 ACPI Version Features 3 24 USB Connector Pinout Signal Descrip APIC ACPI SCIIRQ 3 24 NODS krd Headless Mode 3 25 USB Connector Pinouts EA High Performance Event Timer 3 25 B NUMA Support 3 25 WHEA Support 3 25 BIOS Recovery 3 33 Advanced Chipset Control Boot Sector Recovery from a Serial Port CPU Bridge Configuration 3 0 3 34 Demand Scrubbing 3 11 How to use Serial Flash for Boot Sector Memory Frequency 3 10 Recovery 3 34 Memory Mode 3 11 Requirements 3 34 Patrol Scrubbing 3 11 Boot Sector Recovery from a USB Device QPI Frequency 3 10 3 33 QPI LOs and L1 3 10 Boot Sector Recovery from an IDE CD QPI Links Speed 3 10 ROM 3 34 Throttling Closed Loop Throttling Recover the AMIBIOS Image 3 33 Closed Loop 3 11 BIOS Setup Utility 3 1 AMI BIOS 3 1 Advanced Setup Configurations 3 5 Index 1 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 ACPI Configuration 3 24 Advanced Chipset Control 3 0 BOOT Features 3 5 Event Log Configuration 3 26 Hardware Health Configuration 3 2 IDE SATA Configuration 3 15 Intel PCI X Hub Configuration 3 14 Northbridge Configuration 3 12 PCI PnP Configuration 3 18 Power Configur
69. esse notes ana Uess Figure C 5 Selecting Layout Type Once you have made your selection click Next to continue Step 6 Enter the installation number if you don t have an installation number select the Skip Entering Installation Number Radio Button Click OK and if you did not enter an installation number you ll be given a warning Click Skip to continue see Figure C 6 on page C 6 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 C 6 RED HAT ENTERPRISE LINUX 5 Seet the appropriate keyboard for the system ee Th insta tre full set of supported packaipes eile Mi your se rtcriplion please enter your installation Nurme Swiss German Ireteiiatzom Murriteet Swiss German s int Sarp entering instalkatvon Huritres Tani lirmoript Tamis Typewriter H Gei Jo US intematronal Ubracian Unwted tingdom ietmama Noten Po gt Ment Figure C 6 Enter Installation Number Click Next to continue Step 7 Partitioning allows you to divide your hard drive into isolated sections where each section behaves as its own hard drive Partitioning is particularly useful if you run multiple operating systems On this screen you can choose to create the default layout or choose to manual parti tion using the Create custom layout option of Disk Druid The first three options allow you to perform an automated installation without hav ing to partition your drive s yoursel
70. f If you do not feel comfortable with partition ing your system it is recommended that you do not choose to create a custom layout and instead let the installation program partition for you You can configure an SCSI target for installation or disable a dmraid device from this screen by clicking on the Advanced storage configuration button see Figure C 7 on page C 7 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Installation requires partitioning of your hard drive By default a partitioning tayout Is chosen which is reasonable for most users You can eltner choose to use this oF create your own Remove linux partitions on sefected drives and create default layout Select the drive s to use for this installation Advanced storage configuration Reylew and modify partitioning layout Retease Notes Back Se Next ld Figure C 7 Partitioning Click Next to continue Step 8 Create default layout allows you to have some control concerning what data is removed if any from your system Your options are e Remove all partitions on selected drives and create default layout select this option to remove all partitions on your hard drive s this includes partitions created by other operating systems such as Windows VFAT or NTFS partitions e Remove Linux partitions on selected drives and create default layout select this option to remove o
71. for the PS 2 keyboard and another for the PS 2 mouse Pinouts and signal definitions for both connectors are defined in Table A Table A 1 PS 2 Keyboard Mouse Pinouts and Signal Definitions Pin Signal Name 1 Keyboard mouse data Pinout 2 NC 5 6 3 Ground 3 4 4 Vcc gt 5 5 Keyboard mouse clock 6 N C A 1 Themis Computer RES 22XR3 Installation Manual Configuraton 4 Version 1 0 A 2 A 3 USB Ports The RES 22XR3 Configuration 4 supports two USB Universal Serial Bus port connectors on the rear I O Panel see Figure A 1 for pinouts USB 0 and USB 1 Pinout descriptions are listed in Table A 2 Figure A 1 USB Connector Table A 2 USB Connector Pinouts USB 0 and USB 1 Pin Signal Name Pin Signal Name 1 5V 3 PO 2 PO 4 GND Serial Ports The RES 22XR3 supports one male DB9 serial port connectors on the rear I O panel see Figure A 2 for pinouts TTYA COM1 COM 1 pinouts are listed in Table A 3 1 5 GG 6 9 Figure A 2 COM1 Serial Connector Table A 3 COM1 Serial Connector Pinouts Pin Signal Name Pin Signal Name Pin Signal Name 1 DCD 4 DTR 7 RTS 2 RXD 5 GND 8 CTS 3 TXD 6 DSR 9 RI A 2 Themis Computer A Connector Pinouts A 4 VGA Display Port The RES 22XR3 supports a single 15 pin three 5 pin rows female VGA graphics display port connector on the rear
72. g steps to remove and install a 60 mm fan 1 Make sure the system is powered off 2 Each fan is removable by pushing the fan lid lock left to unlock the fan lid Pull the fan lid upward exposing the three 60 mm fans 3 Each fan is secured by a locking latch on the left hand side To remove a fan press the latch lock toward the center of the fan with the left hand index finger With the right hand index finger press on the right hand side of the fan and pull the fan directly upward from the RES 22XR3 chassis Locking Stud 1 of 3 60 mm Fan Hinged Fan Lid Abies Fon 60 mm Fan es Fan Lia Lock Latch Lock Figure 2 10 The RES 22XR3 60 mm Fans 4 When the fan is removed its 4 wire connector will be disconnected from the chassis Insert the replacement fan carefully into the empty fan slot until it is flush with the second fan The 4 wire connector will automatically engage it successfully 2 12 Themis Computer 2 Installation and Operation Installation Procedures 2 1 7 Power Supply Each load sharing N 1 redundant power supply can be hot swapped while the sys tem is still on and operational 2 1 7 1 Removing a Power Supply Perform the following steps to remove a power supply 1 Remove the two screws holding the power supply locking bracket to the chas sis see Figure 2 11 A Put the locking bracket in a safe place for further use 2 Place the right index finger into the power supply extraction handl
73. ight of a RES 22XR3 loaded with two storage drives two CPUs six DIMMs two PCI cards a CD RW DVD ROM drive and two power sup plies is approximately 25 pounds 11 4 kg The approximate weight of a manual and associated shipping paperwork is one pound 0 5 kg Therefore both the shipping container and a partially installed RES 22XR3 includ ing power cords manual and associated paperwork weigh under 35 pounds 15 9 kg Caution Do not discard the original packaging in which your system was shipped The original packaging was designed specifically to withstand the stress and rigors of today s shipping environment It will be needed in the event the system must be shipped back to Themis Computer For re packing instructions refer to Appendix F Re Packing Instructions 1 9 1 Accessory Kit Each RES 22XR3 Configuration 4 is packaged with an Accessory Kit consisting of the following items A A power supply holding bracket may already be installed on system B Two AC Power Cords C Two Front Bezel Door Barrel Keys When you unpack the RES 22XR3 Configuration 4 please verify that all of these items are included If any of these items are missing or not as pictured please call Themis Technical Support at 510 252 0870 or send an email to support the mis com 1 19 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0
74. in 1 1 42 182 USB1 DM To J10 Pin 3 A3 B3 USB1 DP To J10 Pin 5 A4 B4 USB1 GND To J10 Pin 7 Figure E 4 Dual USB Connector Pinouts Table E 1 Dual USB Connector Pinout Signal Descriptions J10 Pin Signal Name Pin Signal Name 1 5V 2 5V 3 DM Data Minus 4 DM Data Minus 5 DP Data Plus 6 DP Data Plus 7 Ground 8 Ground 9 Cut Off for Keying 10 No Connection Themis Computer Header E Optional RES Audio USB Serial Port Module RES Audio USB Serial Port Custom Module E 1 2 2 Serial Port COM1 The RES Custom Module supports one male DB9 serial port connector J9 on the front I O panel see Figure E 5 COM1 The COM1 pinout is listed in Figure E 5 pinout signal descriptions are described in Table E 2 which also shows the serial header J8 connections to serial port J9 Serial Port COM1 1 5 22 6 9 J8 Header Figure E 5 COM1 Serial Connector Pinout Table E 2 COM 1 Serial Connector Pinout Signal Descriptions J8 and J9 J8 Signal Connected J8 Signal Connected J8 Signal Connected Pin Name to J9 Pin Pin Name to J9 Pin Pin Name to J9 Pin 1 DCD 1 4 RTS 7 7 DTR 4 2 DSR 6 5 TXD 3 8 RI 9 3 RXD 2 6 CTS 8 9 GND 5 Themis Computer E 5 RES 22XR3 Installation Manual Configuration 4 Version 1 0 E 1 2 3 Stereo Audio Ports Optional The RES Custom Module supports one opt
75. ion allati KAS BAAN j aa dn Vun d t tts SS mm KA SIN 3 A RES 22XR3 4 tion figura Con r ise Serve e APSE s t Rugged Configuration 1 CPU SOTNs Motherboard Cont E 2RU Ee SC Quad S wit e 550 I Cor d Dua Qua Two RES 22XR3 Configuration 4 Two Quad Dual Core 5500 or Quad 6 Core 5600 Xeon CPUS RES 22XR3 Configuration 4 Two Quad Dual Core 5500 or Quad 6 Core 5600 Xeon CPUS RES 22XR3 Configuration 4 Two Quad Dual Core 5500 or Quad 6 Core 5600 Xeon CPUS RES 22XR3 Configuration 4 Two Quad Dual Core 5500 or Quad 6 Core 5600 Xeon CPUS RES 22XR3 Configuration 4 Two Quad Dual Core 5500 or Quad 6 Core 5600 Xeon CPUS RES 22XR3 Configuration 4 Two Quad Dual Core 5500 or Quad 6 Core 5600 Xeon CPUS RES 22XR3 Configuration 4 Two Quad Dual Core 5500 or Quad 6 Core 5600 Xeon CPUS THEMIS ag wr THEMIS THEMIS THEMIS THEMIS ag ag ae ae THEMIS ag THEMIS RES 22XR3 Installation Manual Configuration 4 Version 1 0 July 201 SuperMicro Motherboard X8DTN THEMIS Themis Computer Americas and Pacific Rim Themis Computer Rest of World 47200 Bayside Parkway 5 Rue Irene Joliot Curie Fremont CA 94538 38320 Eybens France Phone 510 252 0870 Phone 33 476 14 77 80 Fax 510 490 5529 Fax 33 476 14 77 89 World Wide Web http www themis com Copyright 2011 Themis Computer Inc ALL RIGHTS RESERVED No part of this pu
76. ional Stereo Audio Out jack on the front VO panel see Figure E 6 The Stereo Audio Out pinout is listed in Figure E 6 header J1 pinout signal descrip tions are described in Table E 3 Stereo Audio Out Jack Left Line Out Right Line Out USB to Audio Chip Header Line In Header 5 Volts USB DM USB DP Line In Left Line In Right X No Connection DM Data Minus DP Data Positive Figure E 6 Stereo Audio Connector Pinout Table E 3 Stereo Audio Out Connector Pinout Signal Descriptions J1 Pin Signal Name Pin Signal Name Pin Signal Name 1 No Connection 4 Data Minus 7 Ground 2 5 volts 5 No Connection 8 Ground 3 No Connection 6 Data Plus 9 No Connection E 6 Themis Computer E Optional RES Audio USB Serial Port Module E 2 Ordering the RES Audio USB Serial Port Custom Module Because internal modifications must be made to the RES chassis in order to support the RES Audio USB Serial Port Custom Module the Custom Module must be spec ified on the purchase order for your RES system E 7 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 E 8 Themis Computer Appendix Re Packing Instructions F 1 Re Packaging for Shipment If it becomes necessary to return equipment to Themis Computer it is very impor tant that the equipment be shipped in packaging that provides adequate protection ag
77. isiansieiiupainindas ana h dad va EES Eed ee 3 29 39 2 errereen ee Ge 3 29 219 35 Or e Ee ee Ee 3 30 354 CDIOVDDAVES eegene gedd 3 30 39 9 EE 3 30 DENG NEENOIK AINES ee ee 3 30 3 5 0 Retry Boot DEVICES uia E TE a 3 30 9 0 Bxlt OPHDAN Seene 3 31 201 Save Changes and Exit ieni Ae ee MA 3 31 3 0 2 Discard Changes and EXit vastad asualale essa e oaas eea airas 3 31 3 0 3 Discard Changes mea a aus il 3 32 3 6 4 Load Optimal Defaults 5s cssssccsccsesasssucnscassesdecsaessscessnsteedesansdansaaestecevecis 3 32 3 0 5 Load Fail Safe Der alts EE 3 32 xii Themis Computer Table of Contents 3T BIOS REOOVGI EE 3 33 3 7 1 How to Recover the AMIBIOS Image the Main BIOS Block 3 33 3 7 2 Boot Sector Recovery from a USB Device mimmieerneeennaeeennesee 3 33 3 7 3 Boot Sector Recovery from an IDE CD ROM 1 0 eeeceeeereeeeteeeeees 3 34 3 7 4 Boot Sector Recovery from a Serial Port Serial Flash 3 34 Appendix A Connector Pinout 2 0 0 0 ccc ccccccesscecssececeseeecseecesceecseeecssececseeecseeeesaes A 1 A l PS 2 Keyboard and Mouse s2 gcacassecctsaesvetsnavasaceesedseceannevndte kohane kui ku aadel vaeva v ga A 1 Ae USB POMS EE A 2 A 3 Serral POTS eebe e a a Mai eege N A 2 BA VGA Display PORE serite i Austa ao eta e EE A 3 A 5 Gigabit Ethernet LAN Ports maksena em maaala aaa A A 4 Appendix B Rack Mount Slide Installation 00 ccc ccccccceseceesseceesseeee
78. istin E alata Index 1 Reader Comment Card xiv Themis Computer Table of Contents List of Figures Figure 1 Rugged Enterprise Server Model RES 22XR3 Configuration 4 XiX Figure 2 Front View of a Standard Rear I O RES 22 Chassis Doors Removed xxii Figure 3 Rear View of a Standard Rear I O RES 22 Chassis xxiii Figure 4 Front View of a Front I O RES 32 Chasse xxiii Figure 5 Rear View of a Front I O RES 32 Chassis xxiii Figure 1 1 RES 22XR3 Configuration 4 Configuration 4 with Rack Mounts 1 1 Figure 1 2 X8DTN Motherboard Block Duaeram 1 3 Figure 1 3 External Features of the RES 22XR3 Front and Rea 1 4 Figure 1 4 Major Components of RES 22XR3 Configuration 4 Open Top View 1 5 Figure 1 5 RES 22XR3 System LEDs and I O Connectors X8DTN Motherboard 1 6 Figure 1 6 RES 22XR3 with Front Sound Baffle Installed Front View 1 17 Figure 1 7 RES 22XR3 with Rear Sound Baffle Installed Rear View 1 18 Figure 2 1 Remove the RES 22XR3 Protective Access Cover 2 2 Figure 2 2 Remove RES 22XR3 Air Flow Deflector X8DTN Motherboard 2 4 Figure 2 3 Memory Module Slot Locations X8DTN Motherboard 2 5 Figure 2 4 Memory Module Removal enne 2 6 Figure 2 5 PCI Card Installation X8DTN Motberboard 2 7 Figure 2 6 The RES 22XR3 Lithium Battery and Socket 2 8 Figure 2 7 Opening the RES 22XR3 Fr
79. itoring features of the XSDTN HX8DT3 Motherboards All have an onboard System Hardware Monitor chip that supports PC health monitoring An onboard voltage monitor will scan these onboard voltages continuously e For the X8DTN Motherboard Only CPU1 Vcore CPU2 Vcore 5Vin 12V 12V 3 3Vcc and Battery Voltage Once a voltage becomes unstable a warning is given or an error message is sent to the screen Users can adjust the voltage thresholds to define the sensitivity of the voltage monitor Fan Status Monitor with Firmware Control The PC health monitor can check the RPM status of the cooling fans The onboard CPU and chassis fans are controlled by Thermal Management in the BIOS under Hardware Monitoring in the Advanced section Environmental Temperature Control The thermal control sensor monitors the CPU temperature in real time and will turn on the thermal control fan whenever the CPU temperature exceeds a user defined threshold The overheat circuitry runs independently from the CPU Once it detects that the CPU temperature is too high it will automatically turn on the thermal fan control to prevent any overheat damage to the CPU The onboard chassis thermal circuitry can monitor the overall system temperature and alert users when the chassis temperature is too high Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 A Caution To avoid possible system overheating please be sure to provid
80. ity screen to enter the Exit BIOS Setup screen Saun Changes and Exit Figure 3 5 Exit Options 3 6 1 Save Changes and Exit When you have completed the system configuration changes select this option to leave the BIOS Setup Utility and reboot the computer so the new system configura tion parameters can take effect Select Save Changes and Exit from the Exit menu and press lt Enter gt 3 6 2 Discard Changes and Exit Select this option to quit the BIOS Setup without making any permanent changes to the system configuration and reboot the computer Select Discard Changes and Exit from the Exit menu and press lt Enter gt 3 31 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 6 3 3 6 4 3 6 5 Discard Changes Select this option and press lt Enter gt to discard all the changes and return to the AMI BIOS Utility Program Load Optimal Defaults To set this feature select Load Optimal Defaults from the Exit menu and press lt Enter gt Then select OK to allow the AMI BIOS to automatically load Optimal Defaults to the BIOS Settings The Optimal settings are designed for maximum sys tem performance but may not work best for all computer applications Load Fail Safe Defaults To set this feature select Load Fail Safe Defaults from the Exit menu and press lt Enter gt The Fail Safe settings are designed for maximum system stability but not for maximum performance Th
81. l appear Hysteresis Temperature Closed Loop Only Temperature Hysteresis is the temperature lag in degrees Celsius after the set DIMM temperature threshold is reached before Closed Loop Throttling begins The options are Disabled 1 5 C default 3 0 C and 6 0 C Guardband Temperature Closed Loop Only This is the temperature which applies to the DIMM temperature threshold Each step is in 0 5 C increment The default is 006 Press or on your keyboard to change this value Inlet Temperature This is the temperature detected at the chassis inlet Each step is in 0 5 C increment The default is 070 Press or on your keyboard to change this value 3 11 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 3 5 3 3 5 1 Temperature Rise This is the temperature rise to the DIMM thermal zone Each step is in 0 5 C incre ment The default is 020 Press or on your keyboard to change this value Air Flow This is the air flow speed to the DIMM modules Each step is one mm sec The default is 1500 Press or on your keyboard to change this value Altitude This feature defines how many meters above or below sea level the system is located The options are Sea Level or Below default 1 300 301 600 601 900 901 1200 1201 1500 1501 1800 1801 2100 2101 2400 2401 2700 2701 3000 DIMM Pitch This is the physic
82. llation Manual Configuration 4 Table 1 6 RES 22XR3 General Specifications wtententertentenee 1 15 Table 1 7 RES 22XR3 Configuration 4 Electrical Specifications 1 16 Table 1 8 Approximate Weights of the RES Series eee eeeessecsseceeeeeseecnaeeneeeeneees 1 20 Table 2 1 RES 22XR3 Memory Capacity tg Eeer gedet Eeer 2 3 Table 2 2 RES 22XR3 Memory Population deed Cu 2 3 Table 3 1 PIO Mode Select Options iere edeeEeEeEN eh acon SEENEN 3 17 Table 3 2 DMA Mode Select Options iisitisvsraevithhsae vanu kvaavk kvkv koasakakuenaett khk kuna eha a 3 17 Table A 1 PS 2 Keyboard Mouse Pinouts and Signal Definitions 0 0 0 0 eeeeeeeeteeees A 1 Table A 2 USB Connector Pinouts USB 0 and USbt vee A 2 Table A 3 COMI Serial Connector Pinouts Aerer AE A 2 Table A 4 VGA Connector Pinout Signal Descriptions 0 eee eeeceeeeeeeeeteeeeeteeeenaeeees A 3 Table A 5 RJ45 Ethernet Pinout Signals LAN 1 and LAN A 4 Table E 1 Dual USB Connector Pinout Signal Descriptions J10 sssssseesssessesseese E 4 Table E 2 COM1 Serial Connector Pinout Signal Descriptions J8 and J9 E 5 Table E 3 Stereo Audio Out Connector Pinout Signal Descriptions J1 E 6 xviii Themis Computer Version 1 0 tt DUT Preface This document entitled RES 22XR3 Installation Manual Configuration 4 pro vides instructions on how to install configure power up and boot
83. mblies by the case or the PCB edge 4 Avoid contact with pins leads or circuitry 5 Turn off power and input signals before inserting and removing connectors or test equipment 6 Keep the work area free of non conductive materials such as ordinary plastic as sembly aids and Styrofoam 7 Use field service tools such as cutters screwdrivers and vacuums that are con ductive 8 Always place drives and boards PCB assembly side down on the foam Instructions for the Lithium Battery RES systems are equipped with a lithium battery installed on the motherboard To replace this battery please observe the instructions that are described in this man ual Warning There is a danger of explosion when the wrong type of battery is used as a replacement vi Themis Computer Table of Contents Safety TnsStEUGHONS essene E EENS iv PIreTace uefhettege ceeds eege A R eae ae XIX 1 Overview and Specifications cccccccesscecessceessscessssceesececseeesseeeeseeeeseeeeseeeesas 1 1 lAl EEN 1 1 1 2 System LEDs and I O Connectors ak ola er 1 6 1 3 ACHipSet OVery ew JRR e e eina anes 1 10 1 3 1 The 5500 Series Processor and the 5520 Chipset sssesessessseeesseesseesse 1 10 1 4 Special GE 1 11 1 4 1 Recovery from AC Power Loss ssitas sdai 1 11 1 5 PC Healt Monitoring eege 1 11 1 5 1 Fan Status Monitor with Firmware Control sssssessseeeosseseessoseesssseesesse 1 11 1 5 2 Environment
84. mis Computer 1 Overview and Specifications 1 8 1 8 1 Specifications General Table 1 6 lists general specifications for the RES 22XR3 Table 1 6 RES 22XR3 General Specifications Parameter Description Dimensions e 3 5 2RU high e 17 43 2 cm wide 19 rack mountable e 20 50 8 cm deep Weight e Under 25 pounds 11 4 kg includes 2 CPUs 6 DIMMs 2 full length up to 12 25 PCI cards 1 CD RW DVD ROM drive 2 SAS SATAZ2 storage drives and 2 power supplies e Add 8 8 pounds 4 kg for the reusable shipping container and two AC power cords e The manual and associated shipping paperwork weighs ap proximately 1 Ib 0 5 kg 19 Rack Mountable with Slide capability e Left and right rack mount tabs 3 screws each included with chassis Temperature Operating Non Operating e 0 C to 50 C e 40 C to 70 C Relative Humidity Operating Non Operating e 8 to 90 non condensing e 5 to 95 non condensing Maximum Wet Bulb Operating Non Operating e 27 C non condensing e 35 C non condensing Altitude Operating Non Operating e 0 to 10 000 feet above sea level e 0 to 40 000 feet above sea level Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 1 8 2 Electrical Table 1 7 lists the electrical specifications for the RES 22XR3 Configuration 4 Table 1 7
85. mis Computer corporate and product information may be accessed on the World Wide Web by browsing the website http www themis com Your Comments are Welcome We are interested in improving our documentation and welcome your comments and suggestions You can email your comments to us at docfeedback themis com Please include the document part number in the subject line of your email Themis Computer Preface Notes Cautions Warnings and Sidebars The following icons and formatted text are included in this document for the reasons described Note A note provides additional information concerning the procedure or action being described erator or equipment This may involve but is not restricted to heavy equipment or t Caution A caution describes a procedure or action that may result in injury to the op sharp objects To reduce the risk follow the instructions accompanying this symbol operator or eguipment as a result of hazardous voltages To reduce the risk of elec Warning A warning describes a procedure or action that may cause injury to the trical shock and danger follow the instructions accompanying this symbol Sidebar A sidebar adds detail to the section within which it is placed but is not absolutely vital to the description or procedure of the section XXV Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 xxvi Themis Computer
86. n 1 0 RED HAT ENTERPRISE LINUX 5 The default installation of Red Hat Enterprise Linux Server includes a set of software appiicabie for general internet usage What additional tasks would you like your system to Include support for Software Development Web server You can further customize the software selection now or after install via the software management application Customize jater Customize now measa noras ome ener Figure C 16 Package Installation Default Screen Step 17 Select each component you wish to install Once a package group has been selected if optional components are available you can click on Optional Packages to view which packages are installed by default and to add or remove optional packages from that group see Figure C 17 on page C 17 If there are no optional components this button will be disabled Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Desktop Environments a GNOME Desktop Environment Applications 57 KDE K Desktop Environment Development Servers Base System Languages GNOME is a powerful graphical user interface which includes a panel desktop system icons and a graphica file manager 32 of 36 optional packages selected Optional packages D Betease Notes agak Next Figure C 17 Optional Packages Click Next Step 18 Once you have selected the package
87. n of the ROM file and select the proper protocol XMo dem c Press lt Send gt to start ROM File extraction See the picture below MS Sen File Folder C Documents and Settings Desktop Filename C Documents and Settings Desktop 3C02 ROM Protocol v tee oe Figure 3 7 ROM File Extraction d Once the ROM file extraction is completed the message New BIOS re ceived OK will display Themis Computer 3 BIOS Setup Utility BIOS Recovery Starting FLASH Recovery NVRAM data will be destroyed CMOS data will be preserved Ending FLASH Recovery FLASH Update completed successfully Rebooting Figure 3 8 FLASH Recovery 8 Once remote BIOS flash is completed the system will reboot Note AMBIOS Serial Flash will work with any terminal communications pro gram that supports VT 100 and XModem protocols including protocols designed for GNU LINUX amp BSD operating systems such as minicom It is recommended that the terminal program be configured to use the CR LF style of line termina tion Themis Computer 3 37 RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 38 Themis Computer Appendix Connector Pinouts This appendix provides connector pinouts for all standard user I O interfaces on the rear I O panel of RES 22XR3 Configuration 4 A 1 PS 2 Keyboard and Mouse The RES 22XR3 Configuration 4 provides a 6 pin female mini DIN connector
88. nd beyond Refer to Intel s web site for more information The options are All default 1 and 2 Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations 3 3 3 10 Intel EIST Technology EIST Enhanced Intel SpeedStep Technology allows the system to automatically adjust processor voltage and core frequency in an effort to reduce power consump tion and heat dissipation Please refer to Intel s web site for detailed information The options are Disable Disable GV3 and Enable Enable GV3 default 3 3 3 11 Intel Turbo Boost Available when Intel EIST Technology is enabled Select Enabled to use the Turbo Mode to boost system performance The options are Enabled default and Disabled 3 3 3 12 Intel C STATE Tech If enabled C State is set by the system automatically to either C2 C3 or C4 state The options are Disabled and Enabled default 3 3 3 13 C3 State This feature allows the user to decide how the onboard 5500 5600 Series processor will act at C3 State The options are Disabled ACPI 2 default and ACPI 3 3 3 3 14 C6 State This feature allows the user to decide how the onboard 5500 5600 Series processor will act at C6 State The options are Disabled and Enabled default 3 3 3 15 C State package limit setting Available when Intel C State Tech is enabled If set to Auto the AMI BIOS will automatically set the limit on the C State package register The options are Auto defa
89. nly Linux partitions partitions created from a previous Linux installation This does not remove other partitions you may have on your hard drive s such as VFAT or FAT32 partitions e Use free space on selected drives and create default layout select this option to retain your current data and partitions assuming you have enough free space avail able on your hard drive s Using your mouse choose the storage drive s on which you want Red Hat Enter prise Linux to be installed If you have two or more drives you can choose which drive s should contain this installation Unselected drives and any data on them are not touched Themis Computer C 7 RES 22XR3 Installation Manual Configuration 4 Version 1 0 To review and make any necessary changes to the partitions created by automatic partitioning select the Review option After selecting Review and clicking Next to move forward the partitions created for you in Disk Druid appear You can make modifications to these partitions if they do not meet your needs see Figure C 8 on page C 8 insulation requires partitioning of your hard drive By default a partitioning layout is chosen which is Feasonatee Tor most banan bbe ae sa You can either choose Remove at pa selected drives and create default layout Remove linux partitions on selected drives and create default layout Use free space on selected drives and create default layout Create custom layou
90. not been used Change Supervisor Password Select this feature and press lt Enter gt to enter a new Supervisor Password 3 27 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 4 4 3 4 5 3 4 6 3 4 7 Change User Password Select this feature and press lt Enter gt to access the submenu and then enter a new User Password Clear User Password Available only if User Pass word has been set This item allows you to clear a user password after it has been entered Password Check This item allows you to check a password after it has been entered The options are Setup default and Always Boot Sector Virus Protection When Enabled the AMI BIOS displays a warning when any program or virus issues a Disk Format command or attempts to write to the boot sector of the storage drive The options are Enabled and Disabled default Themis Computer 3 BIOS Setup Utility 3 5 Boot Configuration Use this feature to configure boot settings BIOS SETUP UTILITY Boot Device Priority Figure 3 4 Boot Settings 3 5 1 Boot Device Priority This feature allows the user to specify the sequence of priority for the Boot Device The settings are 1st boot device 2nd boot device 3rd boot device 4th boot device 5th boot device and Disabled e Ist Boot Device Ist Floppy Drive e 2nd Boot Device USB XXXXXXXXX 3 5 2 Removable Drives This feature allows the us
91. nt is used to install packages upgrade RPMs and perform most system maintenance e Logging in as root gives you complete control over your system see Figure C 15 on page C 15 C 14 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED H T ENTERPRISE LINUX 5 The root account Is used for administering the system Enter a password for the root user Root Password eeeees Confirm seeeres A Retease Notes Back gt Next BC Figure C 15 Setting Up Root Account and Password Click Next Step 16 Now that you have made most of the choices for your installation you are ready to confirm the default package selection or customize packages for your sys tem The Package Installation Defaults screen appears and details the default package set for your Red Hat Enterprise Linux installation This screen varies depending on the version of Red Hat Enterprise Linux you are installing see Figure C 16 on page C 16 To customize your package set further select the Customize now option on the screen Clicking Next takes you to the Package Group Selection screen You can select package groups which group components together according to func tion for example X Window System and Editors individual packages or a combi nation of the two To select a component click on the checkbox beside it C 15 Themis Computer RES 22XR3 Installation Manual Configuration 4 Versio
92. number of onboard USB ports to be enabled The Options are Disabled and Enabled default If this item is set to Enabled the USB 2 0 Controller will be enabled Legacy USB Support Select Enabled to use Legacy USB devices If this item is set to Auto Legacy USB support will be automatically enabled if a legacy USB device is installed on the motherboard and vise versa The settings are Disabled Enabled default and Auto USB 2 0 Controller Select Enabled to activate the onboard USB 2 0 controller The options are Enabled default and Disabled Note If the item USB Functions is enabled the USB 2 0 Controller will always be enabled When the item USB Functions is set to Disabled the user has the option to enable or disable the USB 2 0 Controller USB 2 0 Controller Mode This setting allows you to select the USB 2 0 Controller mode The options are Hi Speed 480 Mbps default and Full Speed 12 Mbps BIOS EHCI Hand Off Select Enabled to enable BIOS Enhanced Host Controller Interface support to pro vide a workaround solution for an operating system that does not have EHCI Hand Off support When enabled the EHCI Interface will be changed from the BIOS controlled to the OS controlled The options are Disabled and Enabled default Intel PCI X Hub Configuration PCI Bus AO BO Frequency This option allows the user to set the maximum PCI speed to be used in the PCI slot specified Select Auto to allow the BIOS to a
93. off are able to order a Remote On Off Switch module that is easily installed in an available storage drive bay see Figure D 1 which shows the Remote On Off Switch installed in an RES 22XR3 FIO system RES 32XR3 FIO Remote On Off Switch Module Figure D 1 Remote On Off Switch Module D 1 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 The Remote On Off Switch module is installed after first removing one of the exist ing RES 22XR3 storage drives any except the boot drive then installing a cable with a standard male DB9 connector at one end and an On Off switch an LED is optional at the other end When operational if the RES 22XR3 Configuration 4 is turned OFF pressing the remote switch ON will turn the system on D 2 Remote On Only Configuration When the Remote On Off Switch module is configured as an ON only device press ing the remote switch ON will turn the system on Turning the RES system off how ever requires pressing the ON OFF button that is located directly on the front of the RES 22XR3 chassis D 3 D 2 Ordering the Remote On Off Switch Because internal modifications must be made to the RES 22XR3 Configuration 4 in order to support the Remote On Off Switch module the module must be ordered and installed at the time your system is ordered Themis Computer Appendix Optional RES Audio USB Serial Port Module E 1 RES Audio USB Serial Por
94. on the rear of the chassis vali Out ny AT Wn Ki Connected to an audio connector on the rear of the chassis Line In The RES Custom Module contains an Audio chip on its PCB routed to J1 PCB Printed Circuit Board e Attach the appropriate j I O Cables from the RES Custom Module SS to external devices Port A USB Ports A and B DB9 Serial Port J9 Stereo Audio Out Jack Optional Figure E 3 Attach the Appropriate UO Cables E 3 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 E 1 2 E 1 2 1 USB2 5V To J10 Pin 2 USB2 DM To J10 Pin 4 USB2 DP To J10 Pin 6 USB2 GND To J10 Pin 8 E 4 If the RES Audio USB Serial Port Custom Module is removed from its drive slot it is recommended that the end of the motherboard I O cable attached to the Module header be appropriately tagged so that it can be correctly reconnected when the Module is reinstalled If the I O cable is removed from its motherboard header it should also be appropriately tagged for proper reconnection at a later time Connector Pinouts USB Ports A and B The RES Audio USB Serial Port Custom Module supports two USB Universal Serial Bus port connectors see Figure E 4 for pinouts USB A and USB B on the front I O panel USB pinout descriptions are listed in Figure E 4 pinout signal descriptions are described in Table E 1 USB A USB B DA De USB1 5V To J10 P
95. ont Doors 2 9 Figure 2 8 Unlocking the RES 22XR3 Storage Drives Front Doors Removed 2 10 Figure 2 9 RES 22XR3 Storage Drive Removal sssesssseeseeseesersersrerreesersresrresresresereses 2 11 Figure 2 10 The RES 22XR3 Got mm bans 2 12 Figure 2 11 The RES 22XR3 Power Supply Locking Mechanism ssssseessessesssesesee 2 13 Figure 2 12 Right Rack Mount Bracket i siss sattub steet tavnilaitupj nala deus valiksid 2 15 Figure 2 13 AC Power Socket and LED on the RES 22XR3 Reat 0n 2 16 Figure 2 14 System Power Button and LED on the RES 22XR3 Front 2 16 Themis Computer XV RES 22XR3 Installation Manual Configuration 4 xvi Figure 3 1 Main BIOS Setup Screen 441 ec di scsessyicsssnedicecadeecbes kulka katu Lasd lgs Eed 3 3 Figure 3 2 BIOS Setup Utility Screen x ss dee 3 5 Figure 3 35 Security EE 3 27 Figure 3 4 Boot S tuings eegene EEN 3 29 Figure 3 5 Exit ODUONS ajesdsssieectessasesausspacaicdsoaca taastan kohmakaks ag haledaks kaka 3 31 Figure 3 6 AMI FLSH HyperTerminal AAA 3 36 Figure 3 7 KREE uus small luua tus maaala 3 36 Kisure 3 8 FLASH Recovery EE 3 37 Figure ASI USB WEE A 2 Figure A 2 COMI Serial Connectort a isal lakata mast A 2 Figure A 3 VGA Connector PInOUts lt scsscecsascascansschiatasniarannceciaiuaseancaetaunal aedeaalesstnitsaiees A 3 Figure A 4 Ethernet Connector Type RJ45 s sssessssessesessssessesesssressesersseessessessressesse
96. ont sound baffle To do this loosen the two 2 captive knurled Phillips screws holding the baffle to the chassis see A in Figure 1 6 page 1 17 and remove the baf fle Rear Sound Baffle Rear Right Side lt B Rear Left Side B gt gt B gt gt Figure 1 7 RES 22XR3 with Rear Sound Baffle Installed Rear View Rear Access Accessing the I O connectors and PCI card I O on the rear of the RES 22XR3 Configuration 4 reguires opening the rear sound baffle door To do this loosen the four 4 captive knurled Phillips screws A holding the baffle door to the chassis see A in Figure 1 7 and swing the door downward away from the chassis exposing the rear connectors and PCI cards Removing the protective top cover for access to the interior requires that the rear sound baffle be totally removed this can be done with the baffle door closed To do this five 5 M3x4 flathead Phillips screws B must be removed two on each side of the baffle and one captive in the middle on the top see Figure 1 7 After removing the rear baffle the top cover can be removed as described in Section 2 1 2 Memory Modules on page 2 3 Chapter 2 Installation and Operation Themis Computer 1 Overview and Specifications 1 9 Packaging and Shipping The RES 22XR3 is packaged in a reusable shipping container Approximate weight of an empty container and two AC power cords is 8 8 pounds 4 kg The approximate we
97. peed Control Monitor This feature allows the user to de cide how the system controls the speed s of the onboard fans The CPU temperature and the fan speed are correlative When the CPU on die temperature increases the fan speed will also increase for effective system cool ing Select Full Speed FS to allow the onboard fans to run at full speed for maximum cooling The FS setting is recommended for special system configuration or debugging Select Performance PF for better system cooling The PF setting is recommended for high power consuming and high density systems Select Balanced BL forthe onboard fans to run at a speed that will balance the needs between system cooling and power saving The BL setting is recommended for regular systems with normal hard ware configurations Select Energy Saving ES for best power efficiency and maximum guietness The Options are Full Speed FS Performance PF Balanced BL and Energy Saving ES default 3 3 12 6 Voltage Readings 3 3 13 The following voltage readings will be displayed CPU1 Vcore CPU2 Vcore 5Vin 12V CPU DIMM 3 3Vcc and Battery Voltage ACPI Configuration Use this feature to configure Advanced Configuration and Power Interface ACPI power management settings for your system 3 3 13 1 ACPI Aware O S Available when supported by the OS If this feature is supported by the OS select Enabled for the OS to control ACPI Otherwise disable this feature
98. r toward the rear until the top hooks and tabs clear all chassis slots Figure 2 1 Remove the RES 22XR3 Protective Access Cover 4 Proceed to the appropriate section to install or replace a memory module page 2 3 PCI card page 2 7 or lithium battery page 2 8 2 2 Themis Computer 2 Installation and Operation Installation Procedures 2 1 2 Memory Modules The RES 22XR3 Configuration 4 supports memory according to Table 2 1 and dis tributed according to Table 2 2 Table 2 1 RES 22XR3 Memory Capacity Memory Parameters Motherboard DDR3 Number Pins per Capacity Registered Speed MHz of DIMMS DIMM DIMM X8DTN 288 GB Yes 1333 1066 800 18 240 Caution Exercise extreme caution when installing or removing FBD Memory Modules to prevent any possible damage Table 2 2 RES 22XR3 Memory Population CPU 1 CPU 2 DIMMs Branch 0 Branch 1 Branch 2 Branch 0 Branch 1 Branch 2 6 DIMMs 1A 2A 3A 1A 2A 3A 12 DIMMs 1A 1B 2A 2B 3A 3B 1A 1B 2A 2B 3A 3B 18 DIMMs 1A 1B 1C 2A 2B 2C 3A 3B 3C 1A 1B 1C 2A 2B 2C 3A 3B 3C When installing memory follow these rules for best memory performance e It is strongly recommended that you do not mix memory modules of different speeds and sizes If DIMMs of different speeds have been installed verify that the BIOS setup is
99. rate the cache directory and delay necessary cache accesses This feature reduces or increases the frequency the system prefetches data The options are 8 16 24 32 default 40 48 56 64 72 80 88 96 104 112 120 Intel VT d Select Enabled to enable Intel s Virtualization Technology support for Direct I O VT d by reporting the I O device assignments to VMM through the DMAR ACPI Tables This feature offers fully protected I O resource sharing across the Intel plat forms providing the user with greater reliability security and availability in net working and data sharing The settings are Enabled default and Disabled Active State Power Management Select enable to configure the power states of PCI Express LOs and L1 links The options are Enabled and Disabled default IOH PCIE Max Payload Size Some add on cards perform faster with the coalesce feature which limits the pay load size to 128B while others with a payload size of 256B which inhibits the coalesce feature Please refer to your add on card user guide for the desired setting The options are 256B default and 128B Southbridge Configuration This feature allows the user to configure the settings for the Intel ICH Southbridge chipset 3 13 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 3 6 1 3 3 6 2 3 3 6 3 3 3 6 4 3 3 6 5 3 3 7 3 3 7 1 USB Functions Select the
100. ration Installation Procedures A Insert key into barrel lock and turn 45 degrees clockwise B push the latch lock Latch Handle Figure 2 9 RES 22XR3 Storage Drive Removal 2 1 5 3 Storage Drive Installation To install a storage drive 1 Make sure the latch handle of the drive to be installed is in the open position 2 Properly orient the new drive and insert it into the vacant drive slot If the drive cannot be inserted into the slot rotate it 180 degrees 3 Push the drive toward the rear DO NOT CLOSE the latch handle while push ing until the drive is flush with the front of the chassis The handle will swing closed when it comes into contact with the RES 22XR3 chassis 4 When the drive is fully inserted in its slot insert the key into the barrel lock and turn it 45 degrees counter clockwise The drive is now locked Caution When in the closed position the latch handle secures the drive to the chassis If the handle is closed before the drive is fully inserted the latch mechanism may not fully engage to secure the drive 5 If you are installing another storage drive repeat Steps 1 4 for each additional drive Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 2 1 6 Removable 60 mm Fan The RES 22XR3 contains three high speed 60 mm fans All fans are removable in case of a fan failure 2 1 6 1 Removing and Installing a 60 mm Fan Perform the followin
101. rd C 15 Skip Key C 2 Welcome Screen C 3 Linux Installation 2 17 Index 4 lithium battery 2 installation 2 8 lithium battery and socket illustration of 2 8 removal 2 8 M Main BIOS Setup Screen 3 3 3 5 Major Components of the RES 32XR3 1 5 memory 2 memory modules ECC SDRAM 2 4 N Network Drives Retry Boot Devices 3 30 Noise Level 17 noise reduction 17 noise specification 17 Northbridge Configuration Active State Power Management 3 3 DCA Prefetch Delay 3 13 Direct Cache Access 3 13 Intel YO AT 3 12 Intel VT d 3 13 IOH PCIE Max Payload Size 3 13 Notes xxv O Opening the RES 22XR3 Front Doors 2 9 Operating temperature 2 Output Voltage 1 16 Overheat LED 1 7 P Packaging and Shipping 19 Packing Components F PCI cards 2 1 2 7 PCI PnP Configuration Boot Graphics Adapter Priority 3 19 Clear NVRAM 3 18 Load Onboard LAN1 Option ROM 3 19 Load Onboard LAN2 Option ROM 3 19 Onboard LAN Option ROM Select 3 19 Themis Computer Index PCI IDE BusMaster 3 19 PCI Latency Timer 3 19 Plug amp Play OS 3 18 Slot1 Slot3 PCI X Option ROM 3 19 Slot4 Slot6 PCI E Option ROM 3 19 SR IOV Supported 3 19 Peripheral Support 2 pinouts Gigabit Ethernet LAN A 4 serial ports A 2 E 5 USB port A 2 VGA Connector A 3 PIO Mode Select Table 3 17 Plugging in and Securing the AC Power Cords 2 16 Port A and Port B E 3 POST 3 21 power button and LED 2 16 cord sockets 1 4 LED 2 17 Power Configura
102. renne 2 9 2 1 5 2 Storage Drive Removal ssicscdasccaiasisdaassavssiadseasseaatnsvanaasecnsdeveases 2 10 2 1 5 3 Storage Drive Installation shredda maismaast 2 11 2 1 6 Removable 60 mm Pan i0sisisies cisiccsadsiasedendasdsbeasacegsdecsssstaessedsdaatasesbaccounes 2 12 2 1 6 1 Removing and Installing a 60 mm Fan ssssssenssessseesessessessesssee 2 12 ZAK POE SUPPLY delete Roasts tees laa ed rites tien i s 2 13 2 1 7 1 Removing a Power Supply immeeeeeeneeeonneeeonneeeennee 2 13 2 1 7 2 Installing a Power Supply ssisssiccsssiccsass asesecsssseeerscedarrasesiarce sees 2 14 2 2 SARC Ke VIOUS Susa sadamas asumaad 2 15 22515 Mounting e EE 2 15 2 2 2 Rack Mount Slides Optional lt csi 4sscae cssccasdessecedsgonaees baspacacnteadeetededonns 2 15 2 3 Operation eege eee dedi ae eee 2 16 2 3 1 Plugging in the AC Power Cords Ji kissed seen anatase 2 16 23 2 Turne the System EELER 2 16 2 3 3 E E EE E WEE 2 17 23 31 Configuration EE 2 17 235324 LAAK OSTAN ALO eier 2 17 23 4 Turning the System AE 2 17 3 BIOS Setup Utility sitasti rtsal s aeta seed lahvatas pann kapala avata 3 1 Del AMATO e 3 1 3 1 1 Starting BIOS Setup Utility staatikale vatsake lihaks 3 1 3 1 2 How To Change the Configuration Data metmeemteree 3 2 3 1 3 Starting the SAAPA eitea al aatal 3 2 Themis Computer Version 1 0 Table of Contents 3 2 Main BIOSS UB ji smaili alakaalulist a a earet aeo eto
103. ring N 1 redundant hot pluggable e Optional Choice of 750 watt 48V or 450 500 watt 28V DC Power supply a Additional storage drives are supported by a SATA or SAS PCI card The system supports up to 8 drives total see Table 1 3 on page 1 4 and Figure 2 9 on page 2 10 1 2 Themis Computer 1 Overview and Specifications Overview A A A D D D lt gt Pa B B CSI E LE LES o KS Sall A vd gt E E lt c E ken gt Port Port Port Port bag i 0 21 4 EEC J11 i t t DI A Oo RJ45 RJ45 4 rors Intel 5520 5 Ports 7 8 Ports 9 10 ESI CLINK pane SST25 VF016 Js SPI kam Se DMI CLINK JMB358 ken d t J5 ICH10R PE PCI SIMLP VGA k ES1000 Figure 1 2 X8DTN Motherboard Block Diagram Themis Computer 1 3 RES 22XR3 Installation Manual Configuration 4 Version 1 0 CD RW DVD ROM Combo Slimline Drive System Power A ON OFF Switch Front View ZC Sch i HOt Ju I mute gt W at 21 18 N 2RU i j i i Storage Drive 8 Total Front LED Indicator Panel see Figure 1 5 page 1 6 il 17 42 7 cm 19 with Rack Mounts J V PCI X Slot 133 MHz 20 50 8 cm deep PCI X Slot 100 133 MHz Slot 7 Hidden PCI X Slot 100 133 MHz a Dual ual Powe Supplies Rear View 3 AA Power Supply si gt d GE 8 CH dh Latch Lo
104. rly Alarm 3 22 CPU Temperature High 3 23 Low 3 23 Medium 3 23 D Dimensions chassis 2 doors 2 9 DVI connector 2 17 E ECC SDRAM 1 2 Themis Computer Index memory modules 2 4 Electrical Specifications 1 16 Electrostatic Discharge 17 EMI xxiv Environmental Specifications 7 ESD grounding techniques 2 protected mat 2 Ethernet A 4 Event Log Configuration Clear Event Log 3 26 Mark all Events as Read 3 26 PCI E Error Log 3 26 View Event Log 3 26 Expansion slots 2 F Fan Removing and Installing a 60 mm Fan 2 2 flanges 2 15 Flash EEPROM 3 1 FLASH Recovery Screen 3 37 form factor 2RU 1 2 front door 2 9 front doors 2 9 Front I O 16 Deep Chassis Manual Matrix xxii front panel 4 fused AC 1 16 G General Specifications 5 Gigabit Ethernet A 4 Gigabit Ethernet LAN Port A 3 A 4 graphics card 2 17 Graphics Port Connector Pinout Descriptions A 3 H Hardware Health Configuration CPU Overheat Alarm 3 22 CPU Temperature 1 3 22 CPU Temperature 2 3 22 Fan Speed Control Monitor 3 24 Fan Speed Readings 3 23 System Temperature 3 22 3 23 Voltage Readings 3 24 High Definition Audio A 4 I I O Cables attaching E 3 VO Connectors 1 6 Ethernet LAN Port 9 PS 2 keyboard 1 9 PS 2 mouse 9 Serial Ports 1 9 USB Serial Ports 9 T O faceplates 1 4 ICH10R Southbridge 2 ICHIOR IOH 36D xxiv IDE Master Slave Block Multi Sector Transfer 3 16 LBA Large Mode 3 16 PIO Mode
105. rs 1 2 Index 7 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Index 8 Themis Computer Place Stamp Here Themis Computer 47200 Bayside Parkway Fremont CA 94538 Attn Publications Department lb SINSHL Reader Comment Card We welcome your comments and suggestions to help improve the RES 22XR3 Installation Manual Configuration 4 Please take time to let us know what you think about this manual e Information provided in the manual was complete Agree Disagree Not Applicable___ e Information was well documented and easy to follow Agree Disagree ___ Not Applicable___ e Information was easily accessible Agree Disagree Not Applicable e The manual was useful Agree Disagree Not Applicable___ e Please write down any comments you may have about this manual including how it can be improved Name Title Company Address
106. rs to lock without a key To unlock the doors turn the screw counterclockwise and pull both doors away from the chassis Knurled nannu MAANAAAAD e gt 4 1 aua EHHI FCECL AULULAAAAAAAAUAADA AANLAAAAAAAANANASAA Figure 2 7 Opening the RES 22XR3 Front Doors 2 9 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version1 0 2 1 5 2 Storage Drive Removal The accessory kit shipped with your RES 22XR3 Configuration 4 contains two bar rel lock keys This provides you the option of unlocking locking the storage drives After opening the front doors perform the following steps to remove and install a storage drive bry a TT auch Sm Wi WU Wu li WUNNEN Tree SR Drive Release Drive Lock Button one per drive Figure 2 8 Unlocking the RES 22XR3 Storage Drives Front Doors Removed 1 Make sure the system is powered off see Operation on page 2 16 2 Locate the drive to be removed 3 Insert the barrel lock key into the hard drive you want to remove and turn it 45 degrees clockwise presuming the storage drive is locked 4 Firmly push in the latch lock until the latch handle releases away from the drive 5 Grab the latch handle and pull the drive completely away from its slot Caution When pulling the storage drive from the chassis hold it at the bot tom to prevent it from falling and damaging the drive 2 10 Themis Computer 2 Installation and Ope
107. s Ratio CMOS Setting This feature displays the ratio between the CPU Core Clock and the FSB Frequency The default setting depends on the type of CPU installed on the motherboard The default setting for the CPU installed on your motherboard is 18 default C1E Support Select Enabled to use the feature of Enhanced Halt State CIE significantly reduces the CPU s power consumption by reducing the CPU s clock cycle and voltage during a Halt State The options are Disabled and Enabled default Hardware Prefetcher Available when supported by the CPU If set to Enabled the hardware pre fetcher will prefetch streams of data and instruc tions from the main memory to the L2 cache in the forward or backward manner to improve CPU performance The options are Disabled and Enabled default Adjacent Cache Line Prefetch Available when supported by the CPU The CPU prefetches the cache line for 64 bytes if this option is set to Disabled The CPU prefetches both cache lines for 128 bytes as comprised if Enabled default 3 7 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 8 3 3 3 5 3 3 3 6 3 3 3 7 3 3 3 8 3 3 3 9 MPS and ACPI MADT Ordering This feature allows the user to configure the MPS Multi Processor Specification and ACPI settings for your motherboard Select modern ordering if Windows XP or a newer version of Windows OS is used in the motherboard Select Legacy Ord
108. s the status of the TPM Support to indicate if the TPM is currently enabled or disabled TPM Owner Status This item displays the status of TPM Ownership 3 3 15 Event Log Configuration This feature displays the configurable choices on your system for the event log 3 3 15 1 View Event Log Use this option to view the System Event Log 3 3 15 2 Mark all Events as Read This option marks all events as read The options are OK default and Cancel 3 3 15 3 Clear Event Log This option clears the Event Log memory of all messages The options are OK default and Cancel Caution Any cleared information is unrecoverable Make absolutely sure that you no longer need any data stored in the log before clearing the BMC Event Log 3 3 15 4 PCI E Error Log Select Yes to use the PCI E error log The options are Yes and No default Themis Computer 3 BIOS Setup Utility 3 4 3 4 1 3 4 2 3 4 3 Security Settings The AMI BIOS provides a Supervisor and a User password If you use both pass words the Supervisor password must be set first Change Supers kur Parsuord Figure 3 3 Security Settings Supervisor Password This item indicates if a Supervisor password has been entered for the system Not Installed means a Supervisor password has not been used User Password This item indicates if a user password has been entered for the system Not Installed means that a user password has
109. sa 3 3 32 11 System AD VEA EME kt paas va tits dp senna teats kenam added jamada an mata lid 3 3 3 2 1 1 System Kreeser 3 3 3 2 1 2 S per micro ASD UNA ugeet eth ova reene k eline 3 4 FFAG PROCESSOR eegene PG tact Anesth Seat i VA Kae 3 4 F2 Systemi MEGA oes A tala 3 4 3 3 Advanced Setup Configurations EE 3 5 3 31 BOOT Eeer ee 3 5 3 31 OUK BOO EE 3 5 ka WO SOUL BOO EE 3 5 3 3 1 3 AddOn ROM Display Mode uk 3 6 9434104 1Boolupa Nam oes kiita shui eaka ia ema aal 3 6 3 3 1 5 Wait For Fl If Error egene 3 6 3 3 1 6 Hit Del Message Display s ciccssisecceccasviccsenasvccsctesetcacenseccacaesessees 3 6 334101 Or VO Captre ee 3 6 3 3 2 Power Configuration essuee guten SEENEN ENNEN 3 6 3 3 2 1 Power Button Function s 2j tas idence het added 3 6 3 3 2 2 Restore on AC Power BEE 3 7 SE de ENER Ern 3 7 3 3 3 Processor and Clock Options eedekine dENR deed kaeda vka ad ou dep dave ks kaske 3 7 3 3 3 1 Ratio CMOS Setting est gde ENNEN a 3 7 Doo RE GE 3 7 3 3 3 3 Hardware Prefetcher Available when supported by the CPU imemee 3 7 3 3 3 4 Adjacent Cache Line Prefetch Available when supported by the CPU An 3 7 3 3 3 5 MPS and ACPI MADT Ordering AANEREN 3 8 3 3 3 6 Intel Virtualization Technology Available when supported by the CPU imemee 3 8 3 3 3 7 Execute Disable Bit Capability Available when supported by the OS and the CPU ssesesseeee 3 8 3 3 3 8 Simultaneous Multi Threading Av
110. seeeesseeeeaees B 1 Appendix C Red Hat Enterprise Linux 5 Installation 000 00000000000oo00oo0000000000050000e C 1 Cl itrOduehOn ESM GA SSB C 1 2 MALAM AION ai ro alana nad acai maaala ara ee eege C 1 Appendix D Optional Remote On Off Switch mmmeeeeneeeenneeeneneeeenneneennee D 1 D 1 Remote On Off Configuration cicc gecesssccseasads sdccapusceasvsscedatensstacevs nccsentedesdaccapsnbans D 1 D 2 Remote On Only Configuration ssssesesssesesssessseesseesseesseresseessseeseesseessseessseessrest D 2 D 3 Ordering the Remote On Off Switch se vaga Moik D 2 Appendix E Optional RES Audio USB Serial Port Module E 1 E 1 RES Audio USB Serial Port Custom Module mmieeeeeenneeeonneeeenaeeee E 1 EAL Attach VO Cables sca EE E 3 E 1 2 Connector Pim0uts enee Seed E 4 21 21 USB Ports A and EE E 4 E 1 2 2 Seral Port COM E gen geeiert dee E 5 E 1 2 3 Stereo Audio Ports Optional m ttenrenrene E 6 E 2 Ordering the RES Audio USB Serial Port Custom Module 0 E 7 Appendix F Re Packing Instructions ennetas F 1 F 1 Re Packaging for Shipment Lise nnetud aaa late lad kal aenea tv F 1 2 Packing Components kaes ku laka F 1 xiii Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 F 3 Mstructions for Re Pa ekimg sirssvtksdusstvonatidgtavitmatvada ed ee kust git ons aial F 2 Index OO itaalia paali rikast a
111. sified in accordance with IEC 825 1 1993 LASER CLASS 1 and therefore must not be opened If the enclosure of such a drive is opened invisible laser radiation is emitted Do not allow yourself to be exposed to this radiation The laser system meets the code of Federal Regulations 21 CFR 1040 for the USA and Canadian Radiation Emitting Devices Act REDR C 1370 Electrostatic Discharge ESD A sudden discharge of electrostatic electricity can destroy static sensitive devices or micro circuitry Proper packaging and grounding techniques are necessary pre cautions to prevent damage Always take the following precautions 1 Transport boards in static safe containers such as boxes or bags 2 Keep electrostatic sensitive parts in their containers until they arrive at static free stations 3 Always be properly grounded when touching a sensitive board component or assembly 4 Store electrostatic sensitive boards in protective packaging or on conductive foam Grounding Methods Guard against electrostatic damage at workstations by following these steps 1 Cover workstations with approved anti static material Provide a wrist strap connected to a work surface and properly grounded tools and equipment Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 2 Use anti static mats heel straps or air ionizers to give added protection 3 Handle electrostatic sensitive components boards and asse
112. sing If not contact your manufacturer or install an ATA 133 IDE controller card that supports 48 bit LBA mode The options are Disabled and Auto default Block Multi Sector Transfer Block Mode boosts the IDE drive performance by increasing the amount of data transferred Only 512 bytes of data can be transferred per interrupt if Block Mode is not used Block Mode allows transfers of up to 64 KB per interrupt Select Disabled to allow data to be transferred from and to the device one sector at a time Select Auto to allow data transfer from and to the device to occur multiple sectors at a time if the device supports it The options are Auto default and Disabled PIO Mode The IDE PIO Programmable I O Mode programs timing cycles between the IDE drive and the programmable IDE controller As the PIO mode increases the cycle Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations time decreases The options are Auto default 0 1 2 3 and 4 Select Auto to allow the AMI BIOS to automatically detect the PIO mode Use this value if the IDE storage drive support cannot be determined Select 0 4 to allow the AMI BIOS to use PIO mode 0 4 It has a data transfer rate of 3 3 MBs 16 6 MB s See Table 3 1 below Table 3 1 PIO Mode Select Options Option Selected PIO Mode Max Transfer Rate 0 PIO Mode 0 3 3 MB s 1 PIO Mode 1 5 2 MB s 2 PIO Mode 2 8 3 MB s 3 PIO Mode 3 11 1 MB s
113. ss the Reboot button to reboot your system H Beierse Notes KJ Reboot Figure C 20 Installation is Complete After your computer s normal power up seguence has completed the graphical boot loader prompt appears at which you can do any of the following things e Press Enter causes the default boot entry to be booted e Select a boot label followed by Enter causes the boot loader to boot the operat ing system corresponding to the boot label Do nothing after the boot loader s timeout period by default five seconds the boot loader automatically boots the default boot entry Do whatever is appropriate to boot Red Hat Enterprise Linux One or more screens of messages should scroll by Step 21 Eventually a login prompt or a GUI login screen if you installed the X Window System and chose to start X automatically appears see Figure C 21 on page C 20 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 RED HAT ENTERPRISE LINUX 5 Username Figure C 21 Login Screen Step 22 Once logged in you are ready to use the desktop see Figure C 22 OB Applications Places System GS 245 e Figure C 22 Ready to use the Desktop C 20 Themis Computer Appendix Optional Remote On Off Switch D 1 Remote On Off Configuration Customers interested in installing an optional switch from which to remotely turn the RES 22XR3 Configuration 4 on or
114. ssees A 4 Figure BI Screw Locations for Rack Mount Slide B 1 Figure B 2 RES 22XR3 Rack Mount Slide Installation eee eeceeeeeeeeeeeeeeeeeeeeeteeeees B 3 Figure C 1 Power On after Linux DVD is Inserted into Drive eee eee eeseeeteeeeeeeeeee C 2 Figure 22 Skip EEN C 2 Figure C3 WelCOMesS EE C 3 Figure C 4 Language Selection E C 4 Figure C 5 Selecting Layout Iyperisasmaskusapakkiakemma im iavedikeaka saadik made C 5 Figure C 6 Enter Installation Number C 6 Figure 7 Par tioning Geteste EENS Ee C 7 Kisure C 8 Reviewing Opus kiusama uu C 8 Figure C 9 Creating a Custom Lavalas aal C 9 Figure C 10 Setting Up Boot Loader gt iitsuv5t sauna astd kevad dueti vv ande kadu v la C 10 Figure C 11 Master Boot Record MBR cecceesessseesseceseceeeeeeneeeaeecaeceeeeseeceaeenteeesaes C 11 Figure C 12 Network Devices List jasc ccassses go csasdaneasedaten seatqssyanetniuacsnncancaucaniuestaialsee eeGe C 12 Figure C 13 Edit Interface Pop Up Screen C 13 Figure C 14 Selecting Time TONGA t melu kaalude petta C 14 Themis Computer Version 1 0 Table of Contents Figure C 15 Setting Up Root Account and Password sseseesssesseseseesessesersersrrsesseseeseserse C 15 Figure C 16 Package Installation Default Screen eee ceeeneeeeeeeeeecnaeceeeaeeeneeeesaees C 16 Figure C 17 Optional Package so sss ons asc ee C 17 Figure C 18 Option to Review or Continue sssssessseeesseesesessseesessestesessesersssresesseseesess
115. st and start the Installation Figure C 2 Skip Key C 2 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation Step 3 Press Enter and you will see the Welcome screen Welcome screen does not prompt you for any input From this screen you can access the Release Notes for Red Hat Enterprise Linux 5 0 0 by clicking on the Release Notes button see Figure C 3 on page C 3 RED HAT ENTERPRISE LINUX 5 RED HAT ENTERPRISE LINUX 5 ECT SA ETA Figure C 3 Welcome Screen Click on the Next button to continue Step 4 Using your mouse select a language to use for the installation The lan guage you select here will become the default language for the operating system once it is installed Selecting the appropriate language also helps target your time zone configuration later in the installation The installation program tries to define the appropriate time zone based on what you specify on this screen see Figure C 4 on page C 4 C 3 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Qni tulpi a lis yuu Harv D E e T Siiner mp Geta bagage ter ie rimm English ia Additional Language e longus usa gt Support Soletti ark liimal languages ko stall wm bhe esteem nigh nA Selecta language 10 use as the I Er n gion Seas E zm default language The default I Engli hong Kong language will be the language 2 y _Setect Datas rey
116. sted press the lt Delete gt key to enter the main menu of the AMI BIOS Setup Utility From the main menu you can access the other setup screens An AMI BIOS identification string is displayed at the left bottom corner of the screen below the copyright message Caution Do not upgrade the BIOS unless your system has a BIOS related issue Flashing the wrong BIOS can cause irreparable damage to the system In no event shall Themis Computer be liable for direct indirect special incidental or conse quential damages arising from a BIOS update If you have to update the BIOS do not shut down or reset the system while the BIOS is updating This is to avoid pos sible boot failure 3 2 Themis Computer 3 BIOS Setup Utility 3 2 3 2 1 3 2 1 1 J Main BIOS Setup When you first enter the AMI BIOS Setup Utility you will enter the Main setup screen You can always return to the Main setup screen by selecting the Main tab on the top of the screen The Main BIOS Setup screen is shown in Figure 3 1 Figure 3 1 Main BIOS Setup Screen System Overview The following BIOS information will be displayed System Time System Date Use this option to change the system time and date Highlight System Time or System Date using the arrow keys Enter new values through the keyboard and press lt Enter gt Press the lt Tab gt key to move between fields The date must be entered in Day MM DD YY format The time is entere
117. t p Advanced storage configuration Heyjew and modify partitioning layout L2 Release Notes Back gt Next Figure C 8 Reviewing Option Click Next once you have made your selections to proceed Step 9 If you chose one of the automatic partitioning options and selected Review you can either accept the current partition settings click Next or modify the setup using Disk Druid the manual partitioning tool If you chose to create a custom layout you must tell the installation program where to install Red Hat Enterprise Linux This is done by defining mount points for one or more disk partitions in which Red Hat Enterprise Linux is installed You may also need to create and or delete partitions at this time see Figure C 9 on page C 9 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Drive dev sda 10237 MB Model VM VMware Virtual 5 aa fie New Eit Delete Reset RAID LVM Device CO cut Type Format ord Start End v LVM Volume Groups VoIGroupoo 10080 Logvo101 swap 1984 Logvol ext3 8096 T Mar Drives _ Hide RAID device LVM Volume Group members D Betease Notes gack E Next Figure C 9 Creating a Custom Layout Click Next Step 10 Once you have configured your partitions set up a boot loader If you select No Boot Loader will be Installed you ll need to use a third party boot loader such as Partition Magi
118. t Bulb 5 Noise Level 17 Packaging and Shipping 19 Plug Type 1 16 Power Factor 1 16 Relative Humidity 5 Shock 2 17 Temperature 5 Weight 7 15 starting BIOS Setup Utility 3 Stereo Audio Jack E 3 Stereo Audio Ports E 6 storage drive 2 storage drives installation 2 71 removal 2 10 Storage Drive Installation 2 1 Super I O 1 14 Super IO Device Configuration Floppy A 3 20 Onboard Floppy Controller 3 20 Serial Port Address 3 20 Serial Port2 Address 3 20 SVGA connector 2 17 Switch module Remote D system LEDs 1 6 LANI and LAN2 1 7 Themis Computer Index NIC1 Gb Ethernet 7 NIC2 Gb Ethernet 7 Overheat 1 7 Power 1 7 Power Fail LED 1 8 Power Fail LED Left 17 8 Power Fail LED Off 1 8 Power Fail LED Right 8 Power Fail LED upper 1 7 System Power 1 16 T Table 1 6 7 16 TCG TPM Execute TPM Command 3 26 TPM Enable Disable Status 3 26 TPM Owner Status 3 26 Technical Support 9 temperature xxiv Throttling Closed Loop Throttling Closed Loop Air Flow 3 12 Altitude 3 2 DIMM Pitch 3 2 Guardband Temperature 3 Hysteresis Temperature 3 11 Inlet Temperature 3 Temperature Rise 3 2 TOE device 3 2 Trusted Computing TCG TPM 3 25 TTYA COM1 A 2 Turning the System Off 2 17 Turning the System On 2 16 U UARTs 1 14 USB Ports A 2 E 4 USB ports A 2 E 4 USB Serial Ports 1 9 V VGA graphics port A 3 W Warnings xxv Website Information xxiv X Xeon processo
119. t Custom Module Customers interested in adding audio USB and serial port capabilities to the front of any RES system can easily order an optional RES Audio USB Serial Port Custom Module see Figure E 1 that is installed at the Themis factory into an available stor age drive bay see following Caution Custom Module MA Custom Module PCB I O Connectors Figure E 1 RES Audio USB Serial Port Custom Module E 1 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 E 2 Module to the RES motherboard the RES Custom Module must be installed at the Themis factory before being shipped to the customer Do not attempt to remove the RES Custom Module from its drive slot unless you have some hardware experience see the following paragraph Figure E 2 and Figure E 3 on page E 3 H Caution Because connections must be made internally from the RES Custom The RES Audio USB Serial Port Custom Module is installed after first removing one of the existing RES storage drives any one except the boot drive then connect ing the appropriate I O cables from the RES Audio USB Serial Port Custom Module to the external devices After the storage drive has been removed from the system cables from the internal RES motherboard are fed through the open drive slot and attached to the I O headers on the top surface of the Custom Module PCB and the Module is inserted into the vacant drive slot see Figure E 2 Note
120. t and allow the drives that are attached to these host adaptors to function as bootable drives If this item is set to Disabled the ROM BIOS of the host adaptors will not capture Interrupt 19 and the drives attached to these adaptors will not func tion as bootable devices The options are Enabled default and Disabled Power Configuration Power Button Function If set to Instant_Off the system will power off immediately as soon as the user hits the power button If set to 4 Second Override the system will power off when the user presses the power button for 4 seconds or longer The options are Instant_Off default and 4 Second Override Themis Computer 3 BIOS Setup Utility 3 3 2 2 3 3 2 3 3 3 3 3 3 3 1 3 3 3 2 3 3 3 3 3 3 3 4 Advanced Setup Configurations Restore on AC Power Loss Use this feature to set the power state after a power outage Select Power Off for the system power to remain off after a power loss Select Power On for the system power to be turned on after a power loss Select Last State to allow the system to resume its last state before a power loss The options are Power On Power Off and Last State default Watch Dog Timer If enabled the Watch Dog Timer will allow the system to reboot when it is inactive for more than 5 minutes The options are Enabled and Disabled default Processor and Clock Options This submenu allows the user to configure the Processor and Clock setting
121. that a RES 32XR3 FIO is shown in this Appendix although the Module may be installed into any RES system Figure E 3 on page E 3 shows the internal connections that are made between the RES Custom Module and the RES motherboard RES 32XR3 FIO x G 8 e After attaching header cables through a vacant drive slot to RES motherboard headers and optional rear panel audio I O connectors insert the RES Custom Module into the vacant drive slot RES Audio USB Serial Port Custom Module Figure E 2 Install the RES Audio USB Serial Port Custom Module Themis Computer E Optional RES Audio USB Serial Port Module RES Audio USB Serial Port Custom Module E 1 1 Attach I O Cables Figure E 3 shows the three types of I O supported by the RES Audio USB Serial Port Custom Module e USB Port A and Port B e One Serial Port e One optional Stereo Audio Jack installed only by customer request Figure E 3 also shows the header connectors that are routed by cable through the empty drive slot into the RES system for connection to the proper RES motherboard surface headers or optional rear audio connectors To RES Motherboard surface top side headers To Rear of Chassis ain Optional Connected to any available USB header USB Serial USB to Audio Out Audio In Connected to any available Serial header Header Header Audio Chip Line Out Line In Connected to any available USB header f J10 J8 J1 Connected to an audio connector
122. the Themis Rug ged Enterprise Server RES 22XR3 Configuration 4 see Figure 1 which is based on two Intel 5500 Series Xeon Quad Dual Core CPUs or two Intel 5600 Series Xeon Quad Six Core CPUs RES 22XR3 Configuration 4 supports one motherboard in a 20 deep chassis e SuperMicro X8DTN A matrix describing 20 deep chassis configurations is given in Table 1 page xx A matrix describing 17 deep chassis configurations is given in Table 2 on page xxi Figure 1 Rugged Enterprise Server Model RES 22XR3 Configuration 4 xix Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Table 1 RES x2XR3 20 Deep Chassis Manual Matrix CPU RES 32XR3 RES 22XR3 a Si RES 12XR3 Category Motherboard Soc Manual Manual Manual Manual kets Part Number Part Number Part Number Part Number Configuration 1 ole 2 116790 024 116789 024 A X8DTH 6F X8DTi Configuration 2 X8DTi F 2 117022 024 117017 024 X8DTi LN4F X8DT3 Configuration 3 X8DT3 F 2 117023 024 117018 024 X8DT3 LN4F Configuration 4 X8DTN 2 117024 024 117019 024 Configuration 5 gek 2 117025 024 117020 024 s X8DA3 Configuration 6 X8DAH F 2 117026 024 117021 024 Configuration 7 X8DTU F 117280 024 116970 024 Naming Key X8Dvwxyz v A Sound chip no graphics chip T Graphics chip no sound chip System RES x2XR3 where x 3 2 or 1 Configuration 6 motherbo
123. tion Configure eth0 Advanced Micro Devices AMD 79c970 PCnet32 LANCE Hardware address 00 0C 29 42 45 96 F Mee dynamic IP configuration DHCP Enable IPv4 support Enable IPv6 support i Activate on boot Address Prefix Netmask X Cancel Jox Figure C 13 Edit Interface Pop Up Screen Click OK Step 14 Set your time zone by selecting the city closest to your computer s physical location Click on the map to zoom in to a particular geographical region of the world see Figure C 14 on page C 14 From here there are two ways for you to select your time zone e Using your mouse click on the interactive map to select a specific city repre sented by a yellow dot A red X appears indicating your selection e You can also scroll through the list at the bottom of the screen to select your time zone Using your mouse click on a location to highlight your selection C 13 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 RED HAT ENTERPRISE LINUX 5 Please click into the map to choose a region America New_ York gt Easter Time System clock uses UTC D Retease Notes Back 4 Next Figure C 14 Selecting Time Zone Click Next Step 15 Setting up a root account and password is one of the most important steps during your installation e Your root account is similar to the administrator account used on Windows NT machines The root accou
124. tion Power Button Function 3 6 Restore on AC Power Loss 3 7 Watch Dog Timer 3 7 power cords 2 16 Power Fail Lower 1 7 power supply 2 2 1 installation 2 4 locking mechanism 2 3 Power Supply LED Behavior 1 8 Power Supply Module 8 PSM LED Off 1 8 PSM LED On 1 8 power cord retainer bracket 7 19 Power On Self Test 3 21 Processor and Clock Options Active Processor Cores 3 8 Adjacent Cache Line Prefetch 3 7 C1 Auto Demotion 3 9 CIE Support 3 7 C3 Auto Demotion 3 10 C3 State 3 9 C6 State 3 9 Clock Spread Spectrum 3 10 C State package limit setting 3 9 Execute Disable Bit Capability 3 8 Hardware Prefetcher 3 7 Intel C STATE Tech 3 9 Intel EIST Technology 3 9 Intel Turbo Boost 3 9 Intel Virtualization Technology 3 8 MPS and ACPI MADT Ordering 3 8 Ratio CMOS Setting 3 7 Simultaneous Multi Threading 3 8 processors 1 2 protective cover chassis 2 7 PS 2 keyboard A PS 2 Keyboard and Mouse A PS 2 mouse A R rack mount brackets 2 2 15 with handles 2 15 without handles 2 15 rack mount slides xxiv 2 1 20 B 1 installation kit B 2 screw locations B 1 rack mount slides optional 2 5 Reader Comment Card 1 2 rear panel 1 4 Rear Panel I O 1 2 Red Hat Enterprise Linux 5 C Red Hat Enterprise Linux 5 Installation C Remote Access Serial Port Number 3 20 Remote Access Configuration Flow Control 3 21 Redirection After BIOS POST 3 21 Remote Access 3 20 Serial Port Mode 3 21 Sredir Memory Display Delay 3
125. ualization performance The options are Enabled and Disabled default Slot1 Slot3 PCI X Option ROM Slot4 Slot6 PCI E Option ROM Select Enabled to enable the onboard PCI Slot Option ROM as specified except the VGA card This is to boot the computer using a network interface The options are Enabled default and Disabled Load Onboard LAN1 Option ROM Load Onboard LAN2 Option ROM Select Enabled to enable the onboard LAN1 or LAN2 Option ROM This is to boot the computer using a network interface The options are Enabled and Disabled default Onboard LAN Option ROM Select This feature allows the user to select the onboard LAN option ROM type The options are iSCSI and PXE default Boot Graphics Adapter Priority This feature allows the user to select the priority graphics adapter for system boot The options are Onboard VGA and Offboard VGA default 3 19 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 3 10 Super IO Device Configuration 3 3 10 1 Onboard Floppy Controller Select Enable to enable the onboard Floppy Controller The options are Enabled default and Disabled 3 3 10 2 Serial Port1 Address Serial Port2 Address This option specifies the base I O port address and the Interrupt Request address of Serial Port 1 and Serial Port 2 Select Disabled to prevent the serial port from access ing any system resources When this option is set to Disabled the serial port
126. ult C1 C3 C6 and C7 3 3 3 16 C1 Auto Demotion When this feature is enabled the CPU will conditionally demote C3 C6 or C7 requests to C1 based on un core auto demote information The options are Disabled and Enabled default 3 9 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 3 3 17 C3 Auto Demotion When this feature is enabled the CPU will conditionally demote C6 or C7 requests to C3 based on un core auto demote information The options are Disabled and Enabled default 3 3 3 18 Clock Spread Spectrum 3 3 4 3 3 4 1 3 3 4 2 3 3 4 3 3 3 4 4 Select Enable to use the feature of Clock Spectrum which will allow the BIOS to monitor and attempt to reduce the level of Electromagnetic Interference caused by the components whenever needed The options are Disabled default and Enabled Advanced Chipset Control The items included in the Advanced Settings submenu are listed below CPU Bridge Configuration QPI Quick Path Interconnect Links Speed This feature selects QPI s data transfer speed The options are Slow Mode and Full Speed default QPI Frequency Available if the item QPI Speed is set to Full Speed This selects the desired QPI frequency The options are Auto default 4 800 GT 5 866 GT 6 400 GT QPI LOs and L1 This allows the user to set the QPI power state to a low setting LO and L1 are auto matically selected by the motherboard The options
127. upplies and does not indicate which power supply module lost power first or regained power first b This LED behavior indicates that DC power is not being used and the system is off It does not indicate a loss of AC power to the power supply module Themis Computer 1 Overview and Specifications System LEDs and I O Connectors Table 1 5 Rear Panel I O Connectors Connector Description PS 2 Mouse e 6 pin mini DIN female connector to attach a PS 2 mouse device PS 2 Keyboard e 6 pin mini DIN female connector to attach a PS 2 keyboard device e Two 4 pin USB connectors to attach serial devices to USB port 0 and USBO and USB1 USB port 1 Hi Speed USB 2 0 Note Five additional USB ports USB 2 3 4 6 7 can be accessed di rectly from the motherboard Serial Ports e One DB9 male connector on rear panel to attach a serial device to COM 1 port Note A second serial port COM2 can be accessed directly from the motherboard COM1 Serial Port e One DE 15 3x5 15 pin Video Graphics Array connector to attach a ee VGA display Two Gigabit Ethernet e Standard RJ45 connectors to attach one or two gigabit Ethernet LAN LAN Ports line s LAN1 and LAN2 1 9 Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 1 3 1 10 1 3 1 Chipset Overview Built upon the functionality and the capability of the Intel 5500 5600 CPU platform R
128. uring installation operation or maintenance of the equipment are given in the section entitled Safety Instructions on page iv WARNINGS and CAUTIONS The definitions of WARNINGS and CAUTIONS as used in this document are given in the Preface in the section entitled Notes Cautions Warnings and Sidebars Themis Customer Support North America South America and Pacific Rim Telephone 510 252 0870 Fax 510 490 5529 E mail support themis com Web Site http www themis com RES 22XR3 Installation Manual Configuration 4 Version 1 0 July 2011 Part Number 117019 024 Version Revision History Version ET ER July 2011 iii Themis Computer RES 22XR3 Installation Manual Configuration 4 Version 1 0 Safety Instructions To maximize user safety and ensure correct device operation all instructions con tained in this section should be read carefully Caution Itis important that the user observe all warnings and instructions that are on the device and contained in this manual e The device must be used in accordance with the instructions for use e Electrical installations in the room must correspond to the requirements of respective regulations e Take care that there are no cables particularly mains cables in areas where persons can trip over them e Do not use a mains connection in sockets shared by a number of other power consumers Do not use an extension cable e Only us
129. utomatically detect the capability of the device installed on the bus The options are Auto default 33 MHz PCI 66 MHz PCI 66 MHz PCI X M1 100 MHz PCI X M1 and 133 MHz PCI X M1 Themis Computer 3 BIOS Setup Utility 3 3 7 2 3 3 7 3 3 3 7 4 3 3 8 1 Advanced Setup Configurations I O Port Decode This option allows the user to select the decode range for the I O connections The options are 4K Decode default and 1K Decode RAS Row Address Strobe Sticky Error Handling This option allows the user to decide how to handle Sticky RAS errors The options are Clear Errors default and Leave Errors unchanged VGA 16 Bit Decode Select Enabled to enable the function of decoding VGA for the devices installed behind the PXH PCI Controller Hub The options are Enabled default and Dis abled IDE SATA Configuration When this submenu is selected the AMI BIOS automatically detects the presence of the IDE devices and displays the following items SATA 1 Configuration If Compatible is selected it sets SATA 1 to legacy compatibility mode while select ing Enhanced sets SATA 1 to native SATA mode The options are Disabled Com patible and Enhanced default Configure SATA 1 as This feature allows the user to select the drive type for SATA 1 N Caution Take caution when using this function This feature is for advanced pro grammers only The options are IDE default RAID and AHCI When R
130. y level and generally means that there may be factors contributing to this condition but the CPU is still within its normal operating state and below the CPU Tem perature Tolerance The motherboard fans and CPU will run normally as con figured in the BIOS The fans may adjust to a faster speed depending on the Fan Speed Control settings User intervention No action is required However consider checking the CPU fans and the chassis ventilation for blockage High The processor is running hot This is a caution level since the CPU s Temperature Tolerance has been reached or has been exceeded and may activate an overheat alarm User intervention If the system buzzer and Over heat LED has activated take action immediately by checking the system fans chassis ventilation and room temperature to correct any problems Note 1 The system may shut down if it continues for a long period to prevent damage to the CPU 2 The information provided above is for your reference only For more informa tion on thermal management please refer to Intel s Web site atwww Intel com 3 3 12 3 System Temperature The system temperature will be displayed in degrees in Celsius and Fahrenheit as it is detected by the BIOS 3 3 12 4 Fan Speed Readings This feature displays the fan speed readings from Fan through Fan8 3 23 Themis Computer RES 22XR3 Installation Manual Configuration 3 Version 1 1 3 3 12 5 Fan S
131. y Intel in its newer processors The basic concept is each CPU is embedded by unique temperature information that the motherboard can read This Temperature Threshold or Temperature Tolerance has been assigned at the factory and is the baseline on which the motherboard takes action during different CPU temperature conditions i e by increasing CPU Fan speed triggering the Overheat Alarm etc Since CPUs can have different Temper Themis Computer 3 BIOS Setup Utility J Advanced Setup Configurations ature Tolerances the installed CPU can now send information to the motherboard what its Temperature Tolerance is and not the other way around This results in better CPU thermal management SuperMicro has leveraged this feature by assigning a temperature status to certain thermal conditions in the processor Low Medium and High This makes it easier for the user to understand the CPU s temperature status rather than by just simply seeing a temperature reading Oe 25 C The CPU Temperature feature will display the CPU temperature status as detected by the BIOS Low This level is considered as the normal operating state The CPU tem perature is well below the CPU Temperature Tolerance The motherboard fans and CPU will run normally as configured in the BIOS Fan Speed Con trol User intervention No action required Medium The processor is running warmer This is a precautionar

RES-22XR3 Installation Manual - Configuration 4

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