Home

RES-22XR3 Installation Manual - Configuration 2

Contents

1. e The unit is completely disconnected from the power source only when the power cord is disconnected from the power source Therefore the power cord and its connectors must always remain easily accessible e Do not set up the device in the proximity of heat sources or in a damp location Make sure the device has adequate ventilation e All connection cables must be screwed or locked to the chassis housing e The device is designed to be used in horizontal position only e The device is no longer safe to operate when the device has visible damage or the device no longer functions e In these cases the device must be shut down and secured against unintentional operation e Repairs may only be carried out by a person authorized by Themis Computer e The device may only be opened for the installation and removal of extension PCI cards memory modules storage drives fan housings power supplies Themis Computer Themis Computer and the lithium battery all in accordance with the instructions given in this manual e If extensions are made to the device the legal stipulations and the device spec ifications must be observed e The device must be switched off when removing the top cover for example before installing extension PCI cards Operation of Laser Source Devices DVD CD ROM drives contain laser light emitting diodes classified in accordance with IEC 825 1 1993 LASER CLASS 1 and therefore mus
2. Figure 3 8 FLASH Recovery Screen 8 Once remote BIOS flash is completed the system will reboot gram that supports VT 100 and XModem protocols including protocols designed for GNU LINUX amp BSD operating systems such as minicom It is recommended that the terminal program be configured to use the CR LF style of line termina tion d Note AMBIOS Serial Flash will work with any terminal communications pro Themis Computer Appendix Connector Pinouts This appendix provides connector pinouts for all standard user UO interfaces on rear T O panel of the RES 22XR3 A 1 PS 2 Keyboard and Mouse The RES 22XR3 provides a 6 pin female mini DIN connector for the PS 2 key board and another for the PS 2 mouse Pinouts and signal definitions for both con nectors are defined in Table A 1 Table A 1 PS 2 Keyboard Mouse Pinouts and Signal Definitions Pin Signal Name 1 Keyboard mouse data Pinout 2 NC 5 6 3 Ground 3 4 4 Vcc gt 5 Keyboard mouse clock 6 N C A 1 Themis Computer RES 22XR3 Installation Manual Configuration 2 A 2 A 3 USB Ports The RES 22XR3 supports four USB Universal Serial Bus port connectors see Figure A 1 for pinouts USB 0 through USB 3 on the rear I O panel Pinout descriptions are listed in Table A 2 Figure A 1 USB Connector Table A 2 USB Connector Pinouts Pin Signal Name Pin Signal Name 1
3. RES 22XR3 Installation Manual Configuration 2 A 5 Gigabit Ethernet LAN Port All RES 22XR3 Configuration 2 motherboards support two RJ45 Gigabit Ethernet LAN port connectors LAN 1 and LAN 2 each with two embedded LEDs see Figure A 4 for a pinout In addition LAN 3 and LAN 4 are supported by the X8DTi LN4F motherboard only Pinout signal descriptions are listed in Table A 5 Link Speed Network Traffic Figure A 4 Ethernet Connector Type RJ45 Table A 5 RJ45 Ethernet Pinout Signals Pin Signal Name Pin Signal Name 1 TRDO 5 TRD2 2 TRDO 6 TRD1 3 TRD1 7 TRD3 4 TRD2 8 TRD3 e The color of the left LED indicates the LAN connection speed Off 10 MHz Green 100 MHz Amber 1 GHz e The right LED when lit indicates LAN activity network traffic A 6 A 4 IPMI Dedicated LAN Port The single IPMI dedicated Ethernet LAN port on the RES 22XR3 Configuration 2 rear I O panel has identical pinout and signal descriptions as the LAN Ethernet ports described in Section A 4 SVGA Monitor Port Note that only the X8DTi F and X8DTi LN4F motherboards support IPMI the X8DTi motherboard does not support IPMI Themis Computer Appendix Rack Mount Slide Installation An optional set of two rack mount slides left side and right side is available for all RES 22 systems and should be ordered at the time of purchase The RES 22XR3 Config
4. The RES 22XR3 Configuration 2 motherboards can accommodate 24 pin ATX power supplies Although most power supplies generally meet the specifications required by the CPU some are inadequate In addition the 12V 8 pin power connec tions are also required to ensure adequate power supply to the system Also your power supply must supply 1 5A for the Ethernet ports Caution To prevent damage to your power supply or motherboard please use a power supply that contains a 24 pin and two 8 pin power connectors Be sure to connect these power connectors to the 24 pin and the two 8 pin power connectors on your motherboard for adequate power supply to your system Failure to do so will void the manufacturer warranty on your power supply and motherboard It is strongly recommended that you use a high quality power supply that meets ATX power supply Specification 2 02 or above It must also be SSI compliant for more information please refer to the web site at http www ssiforum org Additionally in areas where noisy power transmission is present you may choose to install a line filter to shield the computer from noise It is recommended that you also install a power surge protector to help avoid problems caused by power surges Themis Computer RES 22XR3 Installation Manual Configuration 2 1 8 1 14 Super UO Controller The Super HO chip storage adapter functions include a floppy disk drive controller industry standard
5. used on the system once installation is complete H you choose to install other languages itis possible to change the default language after the installation O Engish Deland Reset I English New Zealand O ngiish Ptetippines O English Singapore 7 English Sesah Africa Red Hat Linux can install and support several languages To O English Zimbabwe use more than one language on your system choose specific languages to be installed or select all languages to have all available languages installed on the system Estoetan Marsesu Waroo Islands Finnish French eigum D French Canada French France Use the Reset button to cancel French Ouxemburgi S maur Selections S eet SB li i if f i Figure C 4 Language Selection Once you select the appropriate language click Next to continue Step 5 Using your mouse select the correct layout type for example U S English for the keyboard you would prefer to use for the installation and as the sys tem default see Figure C 5 on page C 5 C 4 Themis Computer Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 a Select the appropriate keyboard for the system Stoventan Spanish Sweatn Swiss french Swiss French atnin Swiss German Swiss German tatin1 Tamil inscript Tamil Typewriter Turkish A gt 7 7 77 gt gt gt gt g
6. 5 Turn off power and input signals before inserting and removing connectors or test equipment 6 Keep the work area free of non conductive materials such as ordinary plastic as sembly aids and Styrofoam 7 Use field service tools such as cutters screwdrivers and vacuums that are con ductive 8 Always place drives and boards PCB assembly side down on the foam Instructions for the Lithium Battery RES systems are equipped with a lithium battery installed on the motherboard To replace this battery please observe the instructions that are described in this man ual Warning There is a danger of explosion when the wrong type of battery is used as a replacement vi Themis Computer Table of Contents Preface 4520030 Giese eta dea kuid BA X1X 1 Overview and Specifications ccccsccccsssceesseceesescessscesnsccesnecesnceesseceeeneeeesees 1 1 LE Eet AS AD 1 1 1 2 System LEDS and YO CON eelors dereen cloacal ae 1 6 1 3 KS OVGEVIOW satanismis ava ka atta kaia 1 9 1 3 1 The 5500 5600 Series CPU and the 5520 Chipset ceeeeceeeeeeeeeseeeeeees 1 9 1 4 Special Features s2cis2 cadiansacesediascadcasvacksvtscecnceeusaceauentycpeanesavnnddeanmczennegendeadeebactuaseens 1 10 1 4 1 Recovery from AC Power LOSS ENEE 1 10 LS PC EH de Eet 1 10 1 5 1 Fan Status Monitor with Firmware Control ccccceceesseceeeesseeeeeeenes 1 10 1 5 2 Environmental Temperature Control ccc
7. Bech L Beat Figure C 11 Master Boot Record MBR If your system only uses Red Hat Enterprise Linux you should choose the MBR Click the Change Drive Order button if you would like to rearrange the drive order or if your BIOS does not return the correct drive order Changing the drive order may be useful if you have multiple SCSI adapters or both SCSI and IDE adapters and you want to boot from the SCSI device Click Next C 11 Themis Computer RES 22XR3 Installation Manual Configuration 2 Step 12 The installation program automatically detects any network devices you have and displays them in the Network Devices list see Figure C 12 RED HAT ENTERPRISE LINUX 5 Network Devices Active on Boot Device iPv4 Netmask IPv6 Prefix Edit ul eth0 OHCP DHCP Hostname Set the hostname automatically via DHCP 2 manually rnes localdomain e g host domain com Miscellaneous Settings D Betease Notes Back Next Figure C 12 Network Devices List Step 13 Once you have selected a network device click Edit From the Edit Interface pop up screen you can choose to configure the IP address and Netmask for IPv4 Prefix for IPv6 of the device via DHCP or manually if DHCP is not selected and you can choose to activate the device at boot time If you select Acti vate on boot your network interface is started when you boot see Figure C 13 on page C 13 If you do not have DHCP client
8. Configuration 2 2 1 6 Removable 60 mm Fan RES 22XR3 Configuration 2 contains three high speed 60 mm fans Each fan is removable for replacement in case of a fan failure Note Since RES 22XR3 fans are hot swappable it is not necessary to turn off system power in order to remove and replace a fan 2 1 6 1 Removing and Installing a 60 mm Fan Perform the following steps to remove and install a 60 mm fan 1 On the top cover of the chassis push the fan lid lock left to unlock the fan lid Pull the fan lid upward exposing the three 60 mm fans 2 Each fan is secured by a locking latch on the left hand side To remove a fan press the latch lock toward the center of the fan with the left hand index finger With the right hand index finger press on the right hand side of the fan and pull the fan directly upward from the RES 22XR3 chassis 60 mm Fan Locki 1 of ocking Stud 1 of 3 60 mm Fan Hinged Fan Lid Latch Lock Figure 2 11 The RES 22XR3 Front and Rear 60 mm Fans 3 When the fan is removed its 4 wire connector will automatically disconnect from the chassis Insert the replacement fan carefully into the empty fan slot until it is flush with the second fan The 4 wire connector will automatically engage its counterpart connector successfully 2 12 Themis Computer Installation and Operation Installation Procedures 2 1 7 Power Supply Each load sharing N 1 redundant power supply can be hot s
9. rack xxiv 240 pin DIMM sockets 7 2 2RU form factor 2 5520 chipset 1 9 60 mm fan housing 2 A AC on off switch 2 16 power cord 7 19 2 16 power LED 2 17 power socket 2 16 power supply 1 4 accessory kit 9 Advanced Settings Screen 3 5 AMI_FLSH Hyperterminal Screen 3 37 antistatic bags 2 1 antistatic wrist strap 2 applications military aerospace 1 telecommunications B bezel 2 9 BIOS B 2 BIOS Setup Utility 3 ACPI Configuration 3 22 Advanced Chipset Control 3 9 Advanced Setup Configurations 3 5 BIOS Recovery 3 34 Boot Sector Recovery from a Serial Port 3 35 Boot Sector Recovery from a USB Device 3 34 Boot Sector Recovery from an IDE CD ROM 3 35 How to Recover the AMIBIOS Image 3 34 Boot Configuration 3 3 Boot Device Priority 3 31 CD DVD Drives 3 32 Removable Drives 3 32 Storage Drives 3 31 BOOT Features 3 5 Changing Configuration Data 3 2 CPU Bridge Configuration 3 9 DMI Event Log 3 28 Exit Options 3 32 Discard Changes 3 33 Discard Changes and Exit 3 33 Load Fail Safe Defaults 3 33 Load Optimal Defaults 3 33 Save Changes and Exit 3 33 IDE SATA Configuration 3 13 Introduction 3 7 IP Address Configuration 3 25 IPMI Configuration 3 23 MAC Address Configuration 3 26 Main Setup 3 3 Northbridge Configuration 3 11 PCI PnP Configuration 3 17 Power Configuration 3 6 Processor and Clock Options 3 7 QPI Links Speed 3 9 Remote Access Configuration 3 18 Security Settings 3 29 Boot Sector Virus P
10. 1 e 00 30 48 D0 D4 60 3 3 19 3 Current MAC Address in BMC This item displays the current MAC address used for your IPMI connection 3 3 20 Subnet Mask Configuration Subnet masks tell the network which subnet this machine belongs to The value of each three digit number separated by dots should not exceed 255 3 3 20 1 Parameter Selector Use this feature to select the parameter of your Subnet Masks configuration 3 3 20 2 Subnet Mask This item displays the current subnet mask setting for your IPMI connection Themis Computer BIOS Setup Utility Advanced Setup Configurations 3 3 20 3 VLAN Tagging 3 3 21 Select Enabled to enable VLAN Virtual LAN Tagging support which allows multi ple networks to transparently share the same physical network without leaking infor mation between the bridged networks VLAN Tagging complies with the IEEE 802 1Q Standards The options are Enabled and Disabled default SEL PEF Configuration 3 3 21 1 PEF Configuration Set this feature to configure the Platform Event Filter PEF PEF interprets BMC events and performs actions based on pre determined settings or traps under IPMI 1 5 specifications Powering the system down or sending an alert when a triggering event is detected The default is Disabled default The following will appear if PEF Support is set to Enabled PEF Action Global Control These are the different actions based on BMC events The options are Al
11. 3 3 11 7 Sredir Memory Display Delay This feature defines the length of time in seconds to display memory information The options are No Delay default Delay 1 Sec Delay 2 Sec and Delay 4 Sec 3 19 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 12 System Health Monitor This feature allows the user to monitor system health and review the status of each item as displayed 3 3 12 1 CPU Overheat Alarm This option allows the user to select the CPU Overheat Alarm setting which deter mines when the CPU OH alarm will be activated to provide warning of possible CPU overheat defined by the CPU manufacturer may result in CPU overheat or system instability When the CPU temperature reaches this predefined threshold the CPU and system cooling fans will run at full speed 2 To avoid possible system overheating please be sure to provide adequate airflow to your system H Caution 1 Any temperature that exceeds the CPU threshold temperature pre The options are e The Early Alarm Select this setting if you want the CPU overheat alarm including the LED and the buzzer to be triggered as soon as the CPU temper ature reaches the CPU overheat threshold as predefined by the CPU manufac turer The Default Alarm Select this setting if you want the CPU overheat alarm including the LED and the buzzer to be triggered when the CPU temperature reaches about 50C above the threshold temperature a
12. 5V 3 PO 2 PO 4 GND Serial Ports The RES 22XR3 supports two male DB9 serial port connectors on the rear I O panel see Figure A 2 TTYA COM1 and an optional TTYB COM2 COM and COM pinouts are listed in Table A 3 page A 2 1 5 GG 6 9 Figure A 2 COM1 COM2 Serial Connector Table A 3 COM1 COM2 Serial Connector Pinouts Pin Signal Name Pin Signal Name Pin Signal Name 1 DCD 4 DTR 7 RTS 2 RXD 5 GND 8 CTS 3 TXD 6 DSR 9 RI A 2 Themis Computer Connector Pinouts SVGA Monitor Port A A SVGA Monitor Port A Super VGA connector is installed on the RES 22XR3 Configuration 2 on the rear I O panel A pinout for this connector is given in Figure A 3 and connector pin sig nals are described in Table A 4 Symbol C SVGA Display Port 10 6 5 1 gt wy 15 11 Figure A 3 RES 22XR3 SVGA Connector Pinout Table A 4 RES 22XR3 SVGA Connector Pin Signals Pin VGA Signal Description Pin VGA Signal Description 1 RED OUT Red signal output 9 VCC Filtered Vcc voltage source 2 GREEN OUT Green signal output 10 GND Ground 3 BLUE OUT Blue signal output 11 NC No connection 4 NC No connection 12 SDA Display Data Channel Data 5 GND Ground 13 HSYNC Horizontal synchronization 6 GND Ground 14 VSYNC Vertical synchronization 7 GND Ground 15 SCL Display Data Channel Clock 8 GND Ground A 3 Themis Computer
13. Configuration 2 AN Caution Take caution when using this function This feature is for advanced pro grammers only 3 3 8 3 3 3 8 4 3 3 8 5 The options are IDE default RAID Intel RAID Adaptec and AHCI SATA 2 Configuration Selecting Enhanced will set SATA 2 to native SATA mode The options are Dis abled and Enhanced default Primary IDE Master Slave Secondary IDE Master Slave Third IDE Master and Fourth IDE Master These settings allow the user to set the parameters of Primary IDE Master Slave Secondary IDE Master Slave Third and Fourth IDE Master slots Hit lt Enter gt to activate the following submenu screen for detailed options of these items Set the correct configurations accordingly The items included in the submenu are Type Select the type of device connected to the system The options are Not Installed Auto default CD DVD and ARMD LBA Large Mode LBA Logical Block Addressing is a method of addressing data on a disk drive In the LBA mode the maximum drive capacity is 137 GB For drive capacities over 137 GB your system must be equipped with a 48 bit LBA mode addressing If not contact your manufacturer or install an ATA 133 IDE controller card that supports 48 bit LBA mode The options are Disabled and Auto default Block Multi Sector Transfer Block Mode boosts the IDE drive performance by increasing the amount of data transferred Only 512 bytes of data can be tran
14. Figure C 17 Optional Packages Click Next Step 18 Once you have selected the package groups of your choice you get one last chance to go back before starting the installation process Click Next if you re happy with your choices or click Back to make changes see Figure C 18 on page C 18 Themis Computer RES 22XR3 Installation Manual Configuration 2 RED HAT ENTERPRISE LINUX 5 Click next to begin installation of Red Hat Enterprise Unux Server A complete log of the installation can be found in the file root install log after rebooting your system A kickstart file containing the installation options selected can be found in the file root anaconda ks efg after rebooting the system Q Bstease Notes ema Figure C 18 Option to Review or Continue Click Next Step 19 Installation Starts see Figure C 19 on page C 18 RED HAT ENTERPRISE LINUX 5 redhat Installing glib2 2 12 3 2 1c6 1386 2 MB A library of handy utility functions jBetease Notes Figure C 19 Installation Begins Themis Computer Red Hat Enterprise Linux 5 Installation Installation Step 20 Congratulations Your Red Hat Enterprise Linux installation is now com plete The installation program prompts you to prepare your system for reboot Remember to remove any installation media if it is not ejected automatically upon reboot see Figure C 20 RED HAT ENTERPRISE LINUX 5 Congratul
15. and 17 07 43 2 cm wide which with mounting brackets fits a 19 wide rack Major features are listed in Table 1 2 Table 1 2 Major Features of the RES 22XR3 Configuration 2 Feature Details Processor CPU e Two 1366 pin Intel quad core 5500 Series or quad six core 5600 Series Xeon CPU up to 6 4 GT s each Chipset e Intel 5520 Tylersburg chipset e ICH10R Southbridge and IOH 36D Memory e Twelve 12 240 pin DIMMs supporting up to 192GB 16GB DIMMs of Regis tered ECC DDR3 1333 1066 800 MHz 72 bit SDRAM Expansion slots See Table 1 1 for details Rear Panel I O e See Table 1 4 on page 1 8 for details Peripheral Support e Eight SATA2 storage drives 6 from the motherboard 2 from a PCI card e 1 combination CD RW DVD ROM slimline IDE drive Operating temperature e 0 up to 65 C 32 up to 149 F Shock endurance e 35G 25 msec duration 3 axis Dimensions 20 43 2 cm deep 3 5 2RU high 17 07 43 2 cm wide 19 48 3 cm with mounting brackets 1 2 Rack mount brackets and e Left and right rack mount tabs are attached to the chassis slides e Left and right rack mount slides are optional e 750 watts each auto ranging 100 265 VAC Dual power supplies e Load sharing N 1 redundant hot pluggable e Optional Choice of 750 watt 48V or 500 watt 28V DC Power supply Themis Computer Overview and Specifications Over
16. n llatio THEMIS nee TA D nen y A von Kn t XRF RES 22XR3 nfiguration Co r Serve Se S j ra erpris nfigu t Rugged iherboard Cont CPUs 3 ck LN i DEn 2RU 19 SE erg e e 5500 0 X8DTi Cane with Quad Two RES 22XR3 Configuration 2 Two Quad Core 5500 or Quad Six Core 5600 CPUS RES 22XR3 Configuration 2 Two Quad Core 5500 or Quad Six Core 5600 CPUS RES 22XR3 Configuration 2 Two Quad Core 5500 or Quad Six Core 5600 CPUS RES 22XR3 Configuration 2 Two Quad Core 5500 or Quad Six Core 5600 CPUS RES 22XR3 Configuration 2 Two Quad Core 5500 or Quad Six Core 5600 CPUS RES 22XR3 Configuration 2 Two Quad Core 5500 or Quad Six Core 5600 CPUS RES 22XR3 Configuration 2 Two Quad Core 5500 or Quad Six Core 5600 CPUS ap THEMIS ag THEMIS ie THEMIS jep THEMIS PP THEMIS ap THEMIS WW THEMIS RES 22XR3 Installation Manual Configuration 2 SuperMicro Motherboards X8DTi X8DTi F X8DTi LN4F THEMIS Themis Computer Americas and Pacific Rim 47200 Bayside Parkway Fremont CA 94538 Phone 510 252 0870 Fax 510 490 5529 World Wide Web http www themis com Version 1 0 July 2010 Themis Computer Rest of World 5 Rue Irene Joliot Curie 38320 Eybens France Phone 33 476 14 77 80 Fax 33 476 14 77 89 Copyright 2010 Themis Computer Inc ALL RIGHTS RESERVED No part of this publication may be repro
17. power management settings for your system 3 3 13 1 ACPI Version Features The options are ACPI v1 0 ACPI v2 0 default and ACPI v3 0 Please refer to ACPI s website for further explanation http www acpi info 3 3 13 2 ACPI APIC Support Select Enabled to include the ACPI APIC Table Pointer in the RSDT Root System Description Table pointer list The options are Enabled default and Disabled 3 3 13 3 APIC ACPI SCI IRQ When this item is set to Enabled APIC ACPI SCI IRQ is supported by the system The options are Enabled and Disabled default Themis Computer BIOS Setup Utility Advanced Setup Configurations 3 3 13 4 Headless Mode This feature is used to enable system to function without a keyboard monitor or mouse attached The options are Enabled and Disabled default 3 3 13 5 High Performance Event Timer 3 3 14 Select Enabled to activate the High Performance Event Timer HPET that produces periodic interrupts at a much higher frequency than a Real time Clock RTC does in synchronizing multimedia streams providing smooth playback and reducing the dependency on other timestamp calculation devices such as an x86 RDTSC Instruc tion embedded in the CPU The High Performance Event Timer is used to replace the 8254 Programmable Interval Timer The options are Enabled and Disabled default Trusted Computing 3 3 14 1 TCG TPM Trusted Platform Module Support 3 3 15 Select Yes on this item and ena
18. 2 cm wide 19 rack mountable e 20 50 8 cm deep Weight e Approximately 25 pounds 11 4 kg which includes all CPU 19 Rack Mountable with Slide capability Temperature Operating Non Operating sockets filled 6 DIMMs 2 full length up to 12 25 PCI cards 1 CD RW DVD ROM drive 2 storage drives and 2 power supplies e Add 8 8 pounds 4 kg for the shipping container and two AC power cords e The manual and associated shipping paperwork weighs ap proximately 1 Ib 0 5 kg e Left and right rack mount tabs attached to chassis e Left and right rack mount slides are optional e 0 up to 65 C 32 up to 149 F e 40 to 70 C 40 to 158 F Relative Humidity Operating Non Operating e 8 to 95 non condensing e 5 to 95 non condensing Maximum Wet Bulb Operating Non Operating e 55 C non condensing e 70 C non condensing Altitude Operating Non Operating e 0 to 10 000 feet above sea level e 0 to 40 000 feet above sea level Themis Computer RES 22XR3 Installation Manual Configuration 2 1 9 2 Electrical Table 1 6 lists the electrical specifications for the RES 22XR3 Configuration 2 Table 1 6 RES 22XR3 Electrical Specifications Description Parameter AC 120 volts 750W DC 48 volts 750W DC 28 volts 500W Input Power typical e 420 watts typical 420 watts typical 450 watts typical Input Current e 3
19. 32 screws included in slide kit Figure B 2 RES 22XR3 Hack Mount Slide Installation B 3 Themis Computer RES 22XR3 Installation Manual Configuration 2 B 4 Themis Computer Appendix Red Hat Enterprise Linux 5 Installation C 1 Introduction Welcome to the Red Hat Enterprise Linux Installation Guide This guide contains useful information to assist you during the installation of Red Hat Enterprise Linux via DVD device From fundamental concepts such as installation preparation to the step by step installation procedure C 2 Installation Step 1 Insert the Redhat Enterprise Linux 5 DVD and Power on the system you will see the first installation screen with a boot prompt press ENTER to begin installation see Figure C 1 on page C 2 C 1 Themis Computer RES 22XR3 Installation Manual Configuration 2 RED HAT ENTERPRISE LINUX 5 To install or upgrade in graphical mode press the To install or upgrade in text mode type Use the function keys listed below for more information EF1 Main F2 Options F3 Genera1 F4 Kernel F5 Rescue Figure C 1 Power On after Linux DVD is Inserted into Drive Step 2 Press the tab key to move focus to the Skip key then press Enter key to Continue see Figure C 2 felcome to Red Hat Enterprise To begin testing the CD media before installation press OK Choose Skip to skip the media test and start the install
20. 82077 765 compatible e a data separator e write pre compensation circuitry e decode logic e data rate selection e clock generator drive interface control logic e interrupt and DMA logic The wide range of functions integrated onto the Super I O greatly reduces the num ber of components required for interfacing with floppy disk drives The Super I O supports 360K 720K 1 2M 1 44M or 2 88M disk drives and data transfer rates of 250 Kb s 500 Kb s or 1 Mb s It also provides two high speed 16550 compatible serial communication ports UARTs Each UART includes a 16 byte send receive FIFO a programmable baud rate generator complete modem control and a processor interrupt system Both UARTS provide legacy speed with baud rate of up to 115 2 Kbps and an advanced speed with baud rates of 250 K 500 K or 1 Mb s for higher speed modems The Super I O provides functions that comply with ACPI Advanced Configuration and Power Interface which includes support of legacy and ACPI power manage ment through an SMI or SCI function pin It also features auto power management to reduce power consumption Themis Computer Overview and Specifications Specifications 1 9 1 9 1 Specifications General Table 1 5 lists general specifications for the RES 22XR3 Configuration 2 Table 1 5 RES 22XR3 Configuration 2 General Specifications Parameter Description Dimensions e 3 5 2RU high e 17 07 43
21. Caution When pulling the storage drive from the chassis hold it at the bot tom to prevent it from falling and damaging the drive 2 10 Themis Computer Installation and Operation Installation Procedures A Insert key into barrel lock and turn 45 degrees clockwise B push the latch lock C and pull drive out with the latch handle Latch Handle Figure 2 10 RES 22XR3 Storage Drive Removal 2 1 5 3 Storage Drive Installation To install a storage drive 1 Make sure the latch handle of the drive to be installed is in the open position 2 Properly orient the new drive and insert it into the vacant drive slot If the drive cannot be inserted into the slot rotate it 180 degrees 3 Push the drive toward the rear DO NOT CLOSE the latch handle while push ing until the drive is flush with the front of the chassis The handle will swing closed when it comes into contact with the RES 22XR3 chassis 4 When the drive is fully inserted in its slot insert the key into the barrel lock and turn it 45 degrees counter clockwise The drive is now locked Caution When in the closed position the latch handle secures the drive to the chassis If the handle is closed before the drive is fully inserted the latch mechanism may not fully engage to secure the drive 5 If you are installing another disk drive repeat Steps 1 4 for each additional drive Themis Computer RES 22XR3 Installation Manual
22. Dog Timer Action above is enabled This is a timed delay in minutes or seconds before a system power down or reset after an operating system failure is detected The options are 5 Min default 1 Min 30 Sec and 10 Sec DMI Event Log View Event Log Use this option to view the System Event Log 3 3 22 2 Mark all events as read This option marks all events as read The options are OK and Cancel 3 3 22 3 Clear event log This option clears the Event Log memory of all messages The options are OK and Cancel Themis Computer BIOS Setup Utility Security Settings 3 4 3 4 1 3 4 2 3 4 3 Security Settings The AMI BIOS provides a Supervisor and a User password If you use both pass words the Supervisor password must be set first Change Supervisor Password Figure 3 3 Security Settings Screen Supervisor Password This item indicates if a Supervisor password has been entered for the system Not Installed means a Supervisor password has not been used User Password This item indicates if a user password has been entered for the system Not Installed means that a user password has not been used Change Supervisor Password Select this feature and press lt Enter gt to access the submenu and then enter a new Supervisor Password 3 29 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 4 4 3 4 5 3 4 6 3 4 7 3 4 8 User Access Le
23. Drive E e 2 11 2 1 6 Removable G IE 2 12 2 1 6 1 Removing and Installing a 60 mm Fan miimmeeeemeeeennee 2 12 2011 eer 2 13 2 1 7 1 Removing E EE E 2 13 2 1 7 2 Installing a Power Supply vausivaesasiguad akak osalev ekat naiteks aid poja 2 14 2 25 Rack et aitasin eess nas lendama kl alaealisena ul 2 15 2 2 1 M unting Brackets vvsssissssscivvsaversisngeadeasyascova iiien sisii 2 15 2 2 2 Rack Mount Slides Optional s t te suveta dit ike katkdvena evdes ka teietada vahed eea 2 15 2 34 OPCTAU ON VN A SE Bak 2 16 2 3 1 Plugging in the AC Power Cords 1 sisstindspitevastsvadarkt v aah kukun eua ke jaan Ee 2 16 2 32 Tummine the Systemi EEN 2 16 ER E 2 17 29 21 Cnh AULA EE 2 17 Ze Seduce hei Installation EE EE 2 17 23 44 T ming the System EE 2 17 3 BIOS Setup Utility rts eege ia aa aula taat 3 1 SS Kine E 3 1 Sela Starting BIOS Setup Utlity m aa A eee 3 1 3 1 2 How To Change the Configuration Data mttntenrenneee 3 2 3 13 Starine the Sep UA ds als amka AELE 3 2 3 2 Main Setups eene sende eee el ee ek ee eesti 3 3 3 21 System Re TEE 3 3 viii Themis Computer Table of Contents 3 2 1 1 System Time System Date ed isi cas get eege oer ien eidel tens 3 3 5 2 1 2 Supermicro XS DTI EE 3 4 Dalle EEN ee 3 4 3 2 1 4 System Memory EE 3 4 3 3 Advanced Sep Configuratl ns EE 3 5 Derek BOOT E 3 5 3 3 1 1 HK QUICK BOOL Eege eege AE 3 5 3 3 1 2 Quet Boot ereis See
24. How to turn the RES 22XR3 Configuration 2 on and off 2 1 Installation Procedures components Wear an antistatic wrist strap and use an ESD protected mat Store ESD sensitive components in antistatic bags before placing them on any surface Handle all IC cards by the front panel or edges only H Caution Use industry standard ESD grounding technigues when handling all To install or replace a storage drive fan or power supply skip the next section and proceed directly to page 2 9 page 2 12 or page 2 13 respectively Replacement of motherboard components reguire removal of the protective cover 2 1 1 Remove Protective Top Cover To access a motherboard component open the RES 22XR3 as follows Themis Computer RES 22XR3 Installation Manual Configuration 2 1 Loosen the two captive Phillips screws holding the protective top access cover to the rear of the RES 22XR3 Configuration 2 chassis see A Figure 2 1 2 Both the front and sides of the cover have flat hooks or tabs underneath that fit under slots on the chassis top edges see B Figure 2 1 Remove the cover by sliding it toward the rear until it is free of these chassis slots 3 Store the cover in a safe place until it is replaced Rear View Rear View A Loosen the 2 captive access cover screws Chassis slot Chassis slot Left side top edge B and slide the top cover toward the rear until the top hooks and tabs clear all chassis
25. LED 2 17 power cords 2 16 Power Fail Lower 1 7 power supply 1 2 2 2 16 installation 2 14 locking mechanism 2 13 2 14 power cord retainer bracket 1 19 processor 2 Xeon 64 bit dual core 7 9 protective cover chassis 2 7 PS 2 keyboard A PS 2 Keyboard and Mouse A PS 2 mouse A R rack mount brackets 2 2 15 with handles 2 5 without handles 2 5 rack mount slides xxiv 1 2 1 20 B 1 installation kit B 2 screw locations B rack mount slides optional 2 5 rear panel 1 4 Rear Panel I O 1 2 Red Hat Enterprise Linux 5 C Red Hat Enterprise Linux 5 Installation C Remote On Off Switch module B On Off Configuration B On Only Configuration B 2 ordering B 2 Re Packaging for Shipment E Re Packing Instructions E RES x2XR3 Manual Matrix AC and DC Power Supplies xx xxi xxii Index 3 Themis Computer RES 22XR3 Installation Manual Configuration 2 RES x2XR3S x1Xr3 Manual Matrix AC and DC Power Supplies xxi ROM File Extraction Screen 3 37 S Safety Instructions iv Electrostatic Discharge ESD v Instructions for the Lithium Battery vi Operation of Laser Source Devices v screw locations for rack mount slides B Security Settings Screen 3 29 serial ports A 2 Shock 7 17 shock xxiv Shock endurance 2 Sidebars xxv slides rack mount xxiv slimline drive 7 2 Sound Baffle Installed front 1 17 rear 1 18 Southbridge 2 Specifications Altitude 7 15 BTU Rating 6 Dimensions 2 15 Elect
26. Memory This displays the size of memory available in the system e Size This item displays the memory size detected by the BIOS 3 4 Themis Computer BIOS Setup Utility Advanced Setup Configurations 3 9 Advanced Setup Configurations Use the arrow keys to select Boot Setup and hit lt Enter gt to access the submenu items gt Boot Features Figure 3 2 Advanced Settings Screen 3 3 1 BOOT Features 3 3 1 1 Quick Boot If Enabled this option will skip certain tests during POST to reduce the time needed for system boot The options are Enabled default and Disabled 3 3 1 2 Quiet Boot This option allows the bootup screen options to be modified between POST mes sages or the OEM logo Select Disabled to display the POST messages Select Enabled to display the OEM logo instead of the normal POST messages The options are Enabled default and Disabled 3 5 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 6 3 3 1 3 3 3 1 4 3 3 1 5 3 3 1 6 3 3 1 7 3 3 2 3 3 2 1 AddOn ROM Display Mode This sets the display mode for the Option ROM Select Keep Current to use the cur rent AddOn ROM Display setting Select Force BIOS to use the Option ROM dis play mode set by the system BIOS The options are Force BIOS default and Keep Current Bootup Num Lock This feature selects the Power on state for Numlock key The options are Off and On default Wait For
27. Rack Mount Slide Installation itseentereernrnee B 1 Appendix C Red Hat Enterprise Linux 5 Installation C 1 CT ge ee EE EE C 1 C 2 Installation EEN C 1 Appendix D Optional Remote On Off Switch B 1 DI Remote On Off Configuration surivisurvatv atv ivar vv ratev vn dgedkanvaskate kohane u kehka ve atv vige B 1 D2 Remote On OnlyC EE B 2 D 3 Ordering the Remote On Off Switch ittteenteeeeneeeenneeeenneeoenneeeenneeee B 2 Appendix E Re Packing Instructions eetemeaeeneeeereeren e E 1 E l Re Packaging for Shipment GE E 1 BZ EE EEGEN E 1 E 3 Instructions for Re Pac king sus lauale E 2 Indek ue US EC Eeer Index Reader Comment Card xiii Themis Computer RES 22XR3 Installation Manual Configuration 2 xiv Themis Computer Table of Contents List of Figures Figure 1 1 RES 22XR3 Configuration 2 iteeteeeneeeeneeeonteeeeneeeonneeeenneee enne 1 1 Figure 1 2 X8DTi Motherboard Block Dagram cee eeecceeseceeeceeeeeeeceeeeeceeeeeenteeeesaes 1 3 Figure 1 3 External Features of the RES 22XR3 Front and Rear mee 1 4 Figure 1 4 Major Components of the RES 22XR3 Configuration 2 Open Top View 1 5 Figure 1 5 RES 22XR3 Configuration 2 System LEDs and I O Connectors 00 000 0 1 6 Figure 1 6 RES 22XR3 with Front Sound Baffle Installed Front View 1 17 Figure 1 7 RES 22XR3 with
28. Rear Sound Baffle Installed Rear View 1 18 Figure 2 1 Remove the RES 22XR3 Protective Access Cover 2 2 Figure 2 2 Remove the Air Flow Deflector bcrews ee ceeceeeseeeeeeeceeeeeeceeececeteeeenteeeenaes 2 4 Figure 2 3 Memory Module Slot Locations wwirereaenera 2 5 Figure 2 4 Memory Module Removal iemeeeeeeveneeeneeneeenaneenneeeneeneeenane enne 2 6 Figure 2 5 PCI Card Installation RES 22XR3 Configuration 7 2 7 Figure 2 6 PCI Card Clamp ienei senda valikaine vastava aata asada es ekk K k 2 7 Figure 2 7 The RES 22XR3 Configuration 2 Lithium Battery and Socket sseseeneeseen 2 8 Figure 2 8 Opening the RES 22XR3 Front Bezel Doors 2 9 Figure 2 9 Unlocking the RES 22XR3 storage Drives Front Doors Removed 2 10 Figure 2 10 RES 22XR3 Storage Drive Removal imeeeoeteeeenneeeonneeeennee ena 2 11 Figure 2 11 The RES 22XR3 Front and Rear G mm bans eee eeeseeeseeeeeeeeeeeeteeeees 2 12 Figure 2 12 Remove the RES 22XR3 Power Supply Locking Bracket 2 13 Figure 2 13 The RES 22XR3 Power Supply Locking Mechanism ssssssesssssseessesesee 2 14 Figure 2 14 Right Rack Mount Bracket 2 15 Figure 2 15 AC Power Socket and LED on the RES 22XR3 Bear 2 16 Figure 2 16 System Power Button and LED on the RES 22XR3 Front 2 16 Figure 3 1 Main BIOS Setup Screen 3 3 Figure 3 2 Advanced Settin
29. SAS1 0 6 SAS2 0 y LN4 Extra gigabit Ethernet controller for two extra ports z F IPMI blank No IPMI a All motherboards measure 12 W x 13 L except X8DTN and X8DAH F which are 13 68 W x 13 L XX Themis Computer Preface Table 2 RES x2XR3S RES x1XR3 17 07 Chassis Manual Matrix AC and DC Power Supplies Mother aie RES 32XR3S RES 22XR3S RES 12XR3S RES 31XR3 RES 21XR3 RES 11XR3 board kets Manual P N Manual P N Manual P N Manual P N Manual P N Manual P N X8DTL 6F 2 117408 024 117412 024 117416 024 X8DTL 6 X8DTL 3F 2 117409 024 117413 024 117417 024 X8DTL 3 ER 2 117410 024 117414 024 117418 024 X8DTL i E 2 117411 024 117415 024 117419 024 X8DAL i X8SAX 1 117420 024 117421 024 X8ST3 F 1 117385 024 117422 024 X8STE SH 9 X8STi X8STi F 1 117423 024 X8STi LN4 oe X8STi 3F Naming Key X8uvwxyz e System RES x2XR3S and RES x1XR3 where x 3 2 or 1 u D Double CPU sockets S Single CPU socket v A Sound chip no graphics chip T Graphics chip no sound chip w Not applicable x i SATA only 8 SAS1 0 6 SAS 2 0 y LN4 Extra gigabit Ethernet controller for two extra ports z F IPMI blank No IPMI xxi Themis Computer RES 22XR3 Installation Manual Configuration 2 A matrix describing RES chassis that are configured for front I O connector and front PCI card access in a 16 chassis is giv
30. and applications in independent partitions creat 3 7 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 8 J 3 3 3 5 3 3 3 6 3 3 3 7 3 3 3 8 3 3 3 9 ing multiple virtual systems in one physical computer The options are Enabled default and Disabled Note If there is any change to this setting you will need to power off and restart the system for the change to take effect Please refer to Intel s website for detailed information Execute Disable Bit Capability Available when supported by the OS and the CPU Set to Enabled to enable the Execute Disable Bit which will allow the processor to designate areas in the system memory where an application code can execute and where it cannot thus preventing a worm or a virus from flooding illegal codes to overwhelm the processor or damage the system during an attack The default is Enabled default Refer to Intel and Microsoft Web Sites for more information Simultaneous Multi Threading Available when supported by the CPU Set to Enabled to use the Simultaneous Multi Threading Technology which will result in increased CPU performance The options are Disabled and Enabled default Active Processor Cores Set to Enabled to use a processor s Second Core and beyond Please refer to Intel s web site for more information The options are All default 1 and 2 Intel Speed_Step Technology EIST Enhanced Intel SpeedStep Tec
31. at each end Figure 2 4 Memory Module Removal 3 Before inserting a new memory module into the vacant slot make sure that the two latches are pulled outward away from the center of the slot With the latches in the outward position gently insert the new module verti cally into its slot and press firmly downward until it snaps into place Note Make sure the memory module has the proper orientation by align ing the alignment notch at the bottom edge with its counterpart ridge at the bottom of the slot 4 If all the memory modules have been replaced in the system replace the air flow diverter and secure it with the seven screws previously removed 5 Replace the PCI card retainer bracket and secure it with the single screw removed in Step 1 on page 2 4 6 If installation of motherboard components is completed close the RES 22XR3 chassis by refastening the top cover removed in Section 2 1 1 Remove Protective Top Cover on page 2 1 2 6 Themis Computer Installation and Operation Installation Procedures 2 1 3 PCI Cards RES 22XR3 Configuration 2 supports two 32 bit 33 MHz PCI slots one PCI Express 2 0 x16 slot two PCI Express 2 0 x8 slots and one PCI Express x4 Slot All slots support cards up to 12 28 inches long Lithium Battery PCI Express x4 Slot PCI 32 bit 33 MHz Slot PCI Express 2 0 x16 Slot PCI Express 2 0 x8 Slot PCI Express 2 0 x8 Slot in x16 Slot Figure 2 5 PCI Card Inst
32. ee 3 9 3 3 3 4 Memory Mode sc ccssisissecectaaseonsetuaticccts eiieeii rrena 3 9 ix Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 5 3 Demand Scr bbing etteteter ienGeteieetier eegen ajava kuj kahe 3 10 3 3 3 6 Patrol SCHIDDING scatet n r a tet Aue 3 10 3 3 5 7 Throttling Closed Loop Throttling Open Loop 3 10 3 3 6 Northbridge Configuration 4 sccisecieiacansencsesassdegateseenseescuecaensnctedacaonnseteveene 3 11 3 3 6 1 Crystal Beach DMA Direct Memory Access snsesseeesseese 3 11 3 3 6 2 Crystal Beach DCA Direct Cache Access eeeeeeeeeeesreeeeees 3 12 3 3 6 3 NUMA Support aber NEE 3 12 3 3 0 4 Intel NEE eeneg gea 3 12 331 Southbridge Configuration maaks aaa 3 12 Soil USB BUNCHONS kik Saa al 3 12 3 3 72 Legacy USB Support deele de SEENEN Eed avad 3 12 et USB2 O0 COMO HET viiks aken jagavat manala saadava t navale 3 12 3 3 7 4 USB 2 0 Controller Mode saamatuse sadat kalana 3 13 3 3 k3 BIOS EHET Hand Off sinccr a 3 13 S310 HDA Controller seunes E sctsacuataedees 3 13 Seis Reserved Pase EE 3 13 3 3 8 IDE SATA Configuration itusv t korduva tovaaieket awed aaa laike ENEE kaa 3 13 3 3 8 1 SATAFI Configuration iemeeeveneoenneoeneneooneneo enne enne 3 13 3 3 8 2 TEE 3 13 3 3 8 3 OI eege 3 14 3 3 8 4 Primary IDE Master Slave Secondary IDE Master Slave Third IDE Master and Fourth IDE Master 3 14 3 3 8 5 Block Mul
33. in each processor with 8MB shared cache among cores e Two full width Intel QuckPath interconnect links up to 6 4 GT s of data transfer rate in each direction e Virtualization Technology Integrated Management Engine supported e Point to point cache coherent interconnect Fast narrow unidirectional links and Concurrent bi directional traffic e Error detection via CRC and Error correction via Link level retry 1 9 Themis Computer RES 22XR3 Installation Manual Configuration 2 1 4 1 4 1 Special Features Recovery from AC Power Loss BIOS provides a setting for you to determine how the system will respond when AC power is lost and then restored to the system You can choose for the system to remain powered off in which case you must press the power switch to turn it back on or for it to automatically return to a power on state See the Advanced BIOS Setup section to change this setting The default setting is Last State 1 5 1 10 1 5 1 1 92 PC Health Monitoring This section describes the PC health monitoring features of the RES 22XR3 Config uration 2 motherboards All have an onboard System Hardware Monitor chip that supports PC health monitoring An onboard voltage monitor will scan these onboard voltages continuously e For the X8DTi motherboard Only CPU1 Vcore CPU2 Vcore CPU1 DIMM CPU2 DIMM 1 5V 3 3Vcc V 3 3 SB V 12Vcc V 5Vin and Bat tery Voltage Once a voltage becomes unstab
34. located directly on the front of the RES 32XR3 chassis Ordering the Remote On Off Switch Because internal modifications must be made to the RES 32XR3 Configuration 2 in order to support the Remote On Off Switch module the module must be ordered and installed at the time your system is ordered Themis Computer Appendix Re Packing Instructions E 1 Re Packaging for Shipment If it becomes necessary to return equipment to Themis Computer it is very impor tant that the equipment be shipped in packaging that provides adequate protection against crushing and moisture invasion The original packaging is best for this pur pose provided the packaging is retained in serviceable condition If the original packaging is no longer serviceable or no longer available care should be taken in repackaging for shipment so that the equipment is protected from damage in transit Equipment should be wrapped in a moisture resistant covering and placed either in double boxes or in boxes with crush resistant insulation between the equipment and the outer walls of the container If using the original packaging the clear plastic membrane should be placed next to the equipment i e up against the bottom or down against the top The following instructions assume the original packing components are still avail able and in serviceable condition E 2 Packing Components The original packing components are shown in Figure E 1 page E 2 They
35. partitions set up a boot loader If you select No Boot Loader will be Installed you ll need to use a third party boot loader such as Partition Magic or Microsoft s TLDR unless you want to set up a Boot Loader Password or Configure Advanced Boot Loader Options see Figure C 10 on page C 10 C 9 Themis Computer RES 22XR3 Installation Manual Configuration 2 C 10 RED HAT ENTERPRISE LINUX 5 The GRUB boot loader will be installed on dev sda No boot loader will be installed You can configure the boot loader to boot other operating systems It will allow you to select an operating system to boot from the list To add additional operating systems which are not automatically detected click Add To change the operating system booted by default setect Default by the desired operating system Default Label Device Add Red Hat Enterprise Linux Server eev VoiGroup oo LogVo100 Edit Delete A boot loader password prevents users from changing options passed to the kernel For greater system security It is recommended that you set a password Use a boot loader password Configure advanced boot loader options Q Retease Notes Back i SS Next Figure C 10 Setting Up Boot Loader To configure more advanced boot loader options such as changing the drive order or passing options to the kernel be sure Configure advanced boot loader options is selected before clicking Next Step 11 Now that
36. slots Figure 2 1 Remove the RES 22XR3 Protective Access Cover 4 Proceed to the appropriate section to install or replace a memory module page 2 3 PCI card page 2 7 or lithium battery page 2 8 2 2 Themis Computer Installation and Operation Installation Procedures 2 1 2 Memory Modules The RES 22XR3 Configuration 2 supports memory according to Table 2 1 Note the total memory capacity varies according to the motherboard installed in the RES 22XR3 Table 2 1 RES 22XR3 Memory Capacity Memory Parameters Motherboard DDR3 A E Number Pins per Capacity Registered Speed MHz of DIMMS DIMM ECC X8DTi 192 GB Yes 1333 1066 800 12 240 X8DTi F 192 GB Yes 1333 1066 800 12 240 X8DTi LN4F 192 GB Yes 1333 1066 800 12 240 Caution Exercise extreme caution when installing or removing FBD Memory Modules to prevent any possible damage Table 2 2 RES 22XR3 Memory Population CPU 1 CPU 2 DIMMs Branch 0 Branch 1 Branch 3 Branch 0 Branch 1 Branch 3 6 DIMMs 1A 2A 3A 1A 2A SA 12 DIMMs 1A 1B 2A 2B SA 3B 1A 1B 2A 2B SA 3B When installing memory follow these rules for best memory performance e It is strongly recommended that you do not mix memory modules of different speeds sizes and vendors Themis Computer RES 22XR3 Installation Manual Configuration 2 2 1 2 1 Installation The following procedure ex
37. system has detected The available options are Auto default Force DDR 800 Force DDR 1066 Force DDR 1333 and Force SPD Memory Mode The options are Independent default Channel Mirror Lockstep and Sparing Independent All DIMMs are available to the operating system e Channel Mirror The motherboard maintains two identical copies of all data in memory for redundancy 3 9 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 5 5 3 3 5 6 3 3 5 7 e Lockstep The motherboard uses two areas of memory to run the same set of operations in parallel e Sparing A preset threshold of correctable errors is used to trigger fail over The spare memory is put online and used as active memory in place of the failed memory Demand Scrubbing A memory error correction scheme where the Processor writes corrected data back into the memory block from where it was read by the Processor The options are Enabled and Disabled default Patrol Scrubbing A memory error correction scheme that works in the background looking for and correcting resident errors The options are Enabled and Disabled default Throttling Closed Loop Throttling Open Loop Throttling improves reliability and reduces power in the processor by automatic voltage control during processor idle states Available options are Disabled default and Enabled If Enabled the following items will appear Hysteresis Temperature Closed Loo
38. temperature CPU temperatures voltages and fan speeds go beyond a pre defined range 1 6 1 6 1 ACPI Features ACPI stands for Advanced Configuration and Power Interface The ACPI specifica tion defines a flexible and abstract hardware interface that provides a standard way to integrate power management features throughout a PC system including its hard ware operating system and application software This enables the system to auto matically turn on and off peripherals such as CD ROMs network cards storage drives and printers In addition to enabling operating system directed power management ACPI pro vides a generic system event mechanism for Plug and Play and an operating system independent interface for configuration control ACPI leverages the Plug and Play BIOS data structures while providing a processor architecture independent imple mentation that is compatible with Windows XP Windows 2003 Windows 2008 Windows Vista Operating Systems Slow Blinking LED for Suspend State Indicator When the CPU goes into a suspend state the chassis power LED will start blinking to indicate that the CPU is in suspend mode When the user presses any key the CPU will wake up and the LED will automatically stop blinking and remain on Themis Computer RES 22XR3 Installation Manual Configuration 2 1 12 1 6 2 1 6 3 Main Switch Override Mechanism When an ATX power supply is used the power button can function as a sy
39. upper left hand removable storage drive SATA II IDO is designat Note SAS drives are not supported by Configuration 2 motherboards For SATA ed as the boot drive 2 9 Themis Computer RES 22XR3 Installation Manual Configuration 2 2 1 5 1 Opening the RES 22XR3 Front Doors The knurled captive screw on the front of the RES 22XR3 Configuration 2 allows the doors to lock without a key To unlock the doors turn the screw counterclock wise and pull both doors away from the chassis The accessory kit shipped with your RES 22XR3 contains two barrel lock keys This provides you with the option of unlocking locking the storage drives TTT AAA See H soos m 0 ti S Drive Release Drive Lock Button one per drive Figure 2 9 Unlocking the RES 22XR3 storage Drives Front Doors Removed 2 1 5 2 Storage Drive Removal After opening the front bezel cover perform the following steps to remove and install a storage drive 1 Make sure the system is powered off see Operation on page 2 16 2 Locate the drive to be removed 3 Insert the barrel lock key into the storage drive you want to remove and turn it 45 degrees clockwise presuming the disk drive is locked see A in Figure 2 10 on page 2 11 4 Firmly push in the latch lock until the latch handle releases away from the drive see B in Figure 2 10 5 Grab the latch handle and pull the drive completely away from its slot see C in Figure 2 10
40. you have chosen which boot loader to install you can also deter mine where you want the boot loader to be installed You may install the boot loader in one of two places The master boot record MBR This is the recommended place to install a boot loader unless the MBR already starts another operating system loader such as System Commander The MBR is a special area on your hard drive that is automatically loaded by your computer s BIOS and is the earliest point at which the boot loader can take control of the boot process If you install it in the MBR when your machine boots GRUB presents a boot prompt You can then boot Red Hat Enterprise Linux or any other operating system that you have configured the boot loader to boot see Figure C 11 on page C 11 Themis Computer Red Hat Enterprise Linux 5 Installation Installation The first sector of your boot partition This is recommended if you are already using another boot loader on your system In this case your other boot loader takes control first You can then configure that boot loader to start GRUB which then boots Red Hat Enterprise Linux install Boot Loader record on Gev nda Master Boot Record MBA Dev futal First sector of boot partition Change Orve Order Force LBA32 not normally required If you wish to add default options to the boot command enter them into the Genera kemal parameters Deia General kermel parameters D Release Notes
41. 5 amperes 120 Vac 13 5 amperes 48 Vdc 16 amperes 28 Vdc SVS5 4 or equivalent Input Frequency e 47 63 Hertz NA NA Input Voltage 100 265 Vac e 40 72 Vdc D 18 36 Vdc internally fused internally fused internally fused Input VA Rating e 425 VA NA NA BTU Rating e 1447 BTU hour e 1447 BTU hour e 1447 BTU hour Power Factor e 0 99 NA NA Input Leakage Current e 3 5 mA NA NA Plug Type e IEC 9 ypa SE SVS5 4 or eguivalent a Does not include plug in PCI cards b NA Not Applicable 1 9 2 1 System Power The RES 22XR3 operates with two N 1 redundant AC power supplies of 750 watts capacity each that auto range single phase AC input from 100 to 265 VAC 47 to 63 Hertz sources Filtered and fused internal AC is supplied to each power supply from a rear mounted power connection Two optional N 1 redundant DC power supplies of 750 watts 48 volts or 500 watts 28 volts each may be substituted for the AC power supplies see Table 1 6 These supplies should be specified at the time of your order Output Voltage Note Some AC RES systems may be installed with 650 watt instead of 750 watt power supplies which should not effect the performance of the system The RES 22XR3 power supply provides output voltages that are split between 3 3V 5V 5V sb 12V and 12V rails Themis Computer Overview and Specifications 1 9 3 1 9 3 1 1 9 3 2 1 9 3 3 Front
42. Enabled to enable Intel s Virtualization Technology support for Direct I O VT d by reporting the I O device assignments to VMM through the DMAR ACPI Tables This feature offers fully protected I O resource sharing across the Intel plat forms providing the user with greater reliability security and availability in net working and data sharing The settings are Enabled and Disabled default Southbridge Configuration This feature allows the user to configure the settings for the Intel ICH South Bridge chipset USB Functions Select the number of onboard USB ports to be enabled The Options are Disabled 2 USB ports 4 USB ports 6 USB ports 8 Ports 10 Ports and 12 USB ports default Legacy USB Support Select Enabled to use Legacy USB devices If this item is set to Auto Legacy USB support will be automatically enabled if a legacy USB device is installed on the motherboard and vise versa The settings are Disabled and Enabled default USB 2 0 Controller Select Enabled to activate the onboard USB 2 0 controller The options are Enabled default and Disabled The manufacturer s default setting is Enabled This setting cannot be changed by the user Themis Computer BIOS Setup Utility 3 3 7 4 3 3 7 5 3 3 7 6 3 3 7 7 3 3 8 3 3 8 1 3 3 8 2 Advanced Setup Configurations USB 2 0 Controller Mode This setting allows you to select the USB 2 0 Controller mode The options are Hi Speed 480 Mbps def
43. F1 If Error This forces the system to wait until the F1 key is pressed if an error occurs The options are Disabled and Enabled default Hit Del Message Display This feature displays Press DEL to run Setup during POST The options are Enabled default and Disabled Interrupt 19 Capture Interrupt 19 is the software interrupt that handles the boot disk function When this item is set to Enabled the ROM BIOS of the host adaptors will capture Interrupt 19 at boot and allow the drives that are attached to these host adaptors to function as bootable disks If this item is set to Disabled the ROM BIOS of the host adaptors will not capture Interrupt 19 and the drives attached to these adaptors will not func tion as bootable devices The options are Enabled default and Disabled Power Configuration Power Button Function If set to Instant_Off the system will power off immediately as soon as the user hits the power button If set to 4 Second Override the system will power off when the user presses the power button for 4 seconds or longer The options are Instant Off default and 4 Second Override Themis Computer BIOS Setup Utility 3 3 2 2 3 3 2 3 3 3 3 3 3 3 1 3 3 3 2 3 3 3 3 3 3 3 4 Advanced Setup Configurations Restore on AC Power Loss Use this feature to set the power state after a power outage e Select Power Off for the system power to remain off after a power loss e Select Po
44. Rear View Rear Access Accessing the I O connectors and PCI card I O on the rear of the RES 22XR3 Configuration 2 requires opening the rear sound baffle door To do this loosen the four 4 captive knurled Phillips screws A holding the baffle door to the chassis see A in Figure 1 7 and swing the door downward away from the chassis exposing the rear connectors and PCI cards Removing the protective top cover for access to the interior requires that the rear sound baffle be totally removed this can be done with the baffle door closed To do this five 5 M3x4 flathead Phillips screws B must be removed two on each side of the baffle and one captive in the middle on the top see Figure 1 7 After removing the rear baffle the top cover can be removed as described in Section 2 1 1 Remove Protective Top Cover on page 2 1 Chapter 2 Installation and Operation Themis Computer Right Side lt B Overview and Specifications Packaging and Shipping 1 10 Packaging and Shipping The RES 22XR3 is packaged in a reusable shipping container Approximate weight of an empty container and two AC power cords is 8 8 pounds 4 kg The approximate weight of a RES 22XR3 Configuration 2 loaded with 2 CPUs 6 DIMMs 2 storage drives 2 PCI cards a CD RW DVD ROM drive and 2 power supplies is approximately 25 pounds 11 4 kg See Table 1 7 on page 1 20 for a general weight table for all models of the RES Series of compu
45. SB5 Serial Ports and USB6 USB7 and 2 USB 4 pin headers USB2 and USB3 can be accessed directly from the motherboard e One DB9 male connector on rear panel to attach a serial device to COM 1 Serial Port SAM TRON Note A second serial port COM 2 can be accessed directly from the motherboard Super VGA Port e 15 pin SVGA connector to attach a monitor device e Standard RJ45 connector to attach one or two gigabit Ethernet LAN line s LAN1 and LAN2 Note LAN 3 and LAN 4 are supported by the X8DTi LN4F mother board only Ethernet LAN Ports IPMI Dedicated LAN e Standard RJ45 connector to attach a dedicated IPMI LAN line Port XBDTi F and X8DTi LN4F motherboards only 1 8 Themis Computer Overview and Specifications Chipset Overview 1 3 1 3 1 Chipset Overview Built upon the functionality and the capability of the Intel 5520 platform RES 22XR3 Configuration 2 motherboards provide the performance and feature sets reguired for dual processor based high end systems including optimal configuration options for communications high end CAD systems presentation storage compu tation or database applications The 5500 platform supports single or dual Xeon 64 bit dual core processors with front side bus speeds of up to 1 333 GHz The Intel chipset consists of e the Intel 5520 Tylersburg chipset and e the ICH OR IOH 36D With the Intel QuickPath Interconnect QPI controll
46. Sound Baffle Specifications Environmental Shock The RES 22XR3 Configuration 2 is designed to survive an elevated shock environ ment All structural components are welded together enabling the system to survive a maximum 3 axis shock load of 35G at 25 ms duration Electrostatic Discharge The RES 22XR3 is designed to tolerate electrostatic pulses up to 15 kilovolts KV with no impact on system operation Noise The RES 22XR3 conforms to the 54 db noise specification It is possible to achieve further noise reduction by installing a sound baffle muffler on both the front see Figure 1 6 and the rear see Figure 1 7 on page 1 18 of the RES 22XR3 chassis Call your Themis representative for additional information Figure 1 6 RES 22XR3 with Front Sound Baffle Installed Front View Note All RES systems are shipped with BIOS fan speed set to the quietest mode The typical default fan speed control mode of most RES systems is super quiet 1 17 Themis Computer RES 22XR3 Installation Manual Configuration 2 Rear Sound Baffle Rear Left Side B gt gt B gt gt Front Access Opening the two front doors of the RES 22XR3 Configuration 2 reguires removing the front sound baffle To do this loosen the two 2 captive knurled Phillips screws holding the baffle to the chassis see A in Figure 1 6 page 1 17 and remove the baffle Rear Figure 1 7 RES 22XR3 with Rear Sound Baffle Installed
47. Static Allocation default to allow the host server to allocate an IP address based on a table containing MAC Address IP Address pairs that are manually entered probably by a network administrator Only clients with a MAC address listed in the MAC IP Address Table will be assigned an IP address The IP Address allocated to the client is on a longer term basis than that assigned by the DHCP mentioned in the other option The options are DHCP and Static default IP Address Configuration This submenu displays the following IP Address Configuration information 3 3 18 1 Parameter Selector This item displays the parameter of your IP Address configuration 3 25 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 18 2 IP Address This item displays the IP address of this computer IP addresses are 6 two digit hexa decimal numbers Base 16 0 9 A B C D E F separated by dots Oe 00 30 48 D0 D4 60 3 3 18 3 Current IP Address in BMC This item displays the current IP address used for your IPMI connection 3 3 19 MAC Address Configuration This submenu displays the following MAC Address Configuration information 3 3 19 1 Parameter Selector Use this feature to select the parameter of your Mac Address configuration 3 3 19 2 MAC Address This item displays the MAC address of this computer MAC addresses are 6 two digit hexadecimal numbers Base 16 0 9 A B C D E F separated by dots
48. The configuration data that determines the system parameters may be changed by entering the AMI BIOS Setup utility This Setup utility can be accessed by pressing lt Del gt at the appropriate time during system boot 3 1 3 Starting the Setup Utility Normally the only visible Power On Self Test POST routine is the memory test As the memory is being tested press the lt Delete gt key to enter the main menu of the AMI BIOS Setup Utility From the main menu you can access the other setup screens An AMI BIOS identification string is displayed at the left bottom corner of the screen below the copyright message Flashing the wrong BIOS can cause irreparable damage to the system In no event shall Supermicro be liable for direct indirect special incidental or consequential damages arising from a BIOS update If you have to update the BIOS do not shut down or reset the system while the BIOS is updating This is to avoid possible boot failure 1 Caution Do not upgrade the BIOS unless your system has a BIOS related issue 3 2 Themis Computer BIOS Setup Utility Main Setup 3 2 3 2 1 3 2 1 1 Main Setup When you first enter the AMI BIOS Setup Utility you will enter the Main setup screen You can always return to the Main setup screen by selecting the Main tab on the top of the screen The Main BIOS Setup screen is shown below BIOS SETUP UTILITY System Time Figure 3 1 Main BIOS Setup Screen Sy
49. access or you are unsure what to provide here please contact your network administrator Themis Computer Red Hat Enterprise Linux 5 Installation Installation Edit interface etho Configure eth0 Advanced Micro Devices AMD 79c970 PCnet32 LANCE Hardware address 00 0C 29 42 45 96 F luse dynamic IP configuration DHCP Enable IPv4 support kW Enable IPv6 support Activate on boot Address Prefix Netmask X cance Pox Figure C 13 Edit Interface Pop Up Screen Click OK Step 14 Set your time zone by selecting the city closest to your computer s physi cal location Click on the map to zoom in to a particular geographical region of the world see Figure C 14 on page C 14 From here there are two ways for you to select your time zone e Using your mouse click on the interactive map to select a specific city repre sented by a yellow dot A red X appears indicating your selection e You can also scroll through the list at the bottom of the screen to select your time zone Using your mouse click on a location to highlight your selection C 13 Themis Computer RES 22XR3 Installation Manual Configuration 2 RED HAT ENTERPRISE LINUX 5 Please click into the map to choose a region America New York Eastem Time System clock uses UTC Betease Notes Back T Next Figure C 14 Selecting Time Zone Click Next Step 15 Setting up a root account and pa
50. al cable How to use Serial Flash for Boot Sector Recovery 1 Connect a Null modem serial cable between the target system and the host system that runs the terminal program 2 Make sure that the new BIOS Image file is accessible for the host system 3 Start the terminal program on the host system and create a new connection 3 35 Themis Computer RES 22XR3 Installation Manual Configuration 2 Use the following communication parameters for the new connection e Bits per second 115200 bits sec e Data Bits 8 e Parity None e Stop Bit 1 e Flow Control None 4 When BIOS flashing is completed the computer will reboot Do not interrupt the flashing process until it is completed Sa E E SR Press lt SpaceBar gt to update BIOS SUE a VL aap eco a A ene at Confirm update BIOS y n y Ketma ve ede tae Begin Eemote BIOS flash y n y DEE Starting remote flash Sue el Upload new BIOS file using Xmodem protocol 5 Following the instructions given on the screen to update the BIOS These instructions are also shown below a Atthe prompt press the lt SpaceBar gt to update the BIOS b When asked to confirm BIOS updating press lt y gt to confirm BIOS up dates c Press lt y gt again to begin flashing BIOS remotely Note Be sure to complete Steps a to c above guickly because you have a second or less to do so 6 Once you ve completed the inst
51. allation RES 22XR3 Configuration 2 2 1 3 1 Installing Cards Perform the following steps to install a PCI card 1 Loosen the captive knurled screw on the PCI card clamp see A Figure 2 6 Captive knurled screw PCI card clamp PCI card I O panels 7 total a seve A CN vd 21115117 We MAALT D rrrrrrsnar A Loosen the captive knurled screw B and swing the PCI card clamp upward Figure 2 6 PCI Card Clamp 2 7 Themis Computer RES 22XR3 Installation Manual Configuration 2 2 Swing the PCI card clamp away from the top of the chassis exposing the tops of the PCI card I O panels see B Figure 2 6 3 Locate the empty slot within which a card will be installed see Figure 2 5 4 Install the new card making sure the I O panel is aligned with the chassis opening 5 Repeat Step 3 and Step 4 until all additional cards have been installed 6 Swing the PCI card clamp back to its position over the PCI card I O panels and tighten the captive knurled screw on the PCI card clamp 7 Attach any internal I O cables to the installed PCI cards and carefully fold and tuck any exposed ribbon cables into the cabinet 8 If you have no further installations to perform close the RES 22XR3 chassis by refastening the top cover removed in Section 2 1 1 Remove Protective Top Cover on page 2 1 2 1 4 Lithium Battery 2 1 4 1 Removing the Lithium Battery Perform the following steps to re
52. ation between clement Figure C 2 Skip Key Themis Computer Red Hat Enterprise Linux 5 Installation Installation Step 3 Press Enter and you will see the Welcome screen Welcome screen does not prompt you for any input From this screen you can access the Release Notes for Red Hat Enterprise Linux 5 0 0 by clicking on the Release Notes button see Figure C 3 RED HAT ENTERPRISE LINUX 5 RED HAT ENTERPRISE LINUX 5 D se Figure C 3 Welcome Screen Click on the Next button to continue Step 4 Using your mouse select a language to use for the installation The lan guage you select here will become the default language for the operating system once it is installed Selecting the appropriate language also helps target your time zone configuration later in the installation The installation program tries to define the appropriate time zone based on what you specify on this screen see Figure C 4 on page C 4 C 3 Themis Computer RES 22XR3 Installation Manual Configuration 2 redhat Onine Help __ Addtroeal Language Suppor Sehect the Get ault Language lor ihe d E bh USA Additional Language pe ova Soe Support Select additional languages to install on the system ee Ines 2 Select a language to use as the C Engilish Great treme zeen default language The default Oe t nglish Hong Kangi select Gett language will be the language C Engh Ordud Select Datak Orly
53. ations the installation is complete Remove any media used during the Installation process and press the Reboot button to reboot your system D 4 Q Betease Notes KJ Reboot Figure C 20 Installation is Complete After your computer s normal power up seguence has completed the graphical boot loader prompt appears at which you can do any of the following things e Press Enter causes the default boot entry to be booted e Select a boot label followed by Enter causes the boot loader to boot the operat ing system corresponding to the boot label Do nothing after the boot loader s timeout period by default five seconds the boot loader automatically boots the default boot entry Do whatever is appropriate to boot Red Hat Enterprise Linux One or more screens of messages should scroll by Themis Computer RES 22XR3 Installation Manual Configuration 2 Step 21 Eventually a login prompt or a GUI login screen if you installed the X Window System and chose to start X automatically appears see Figure C 21 RED HAT ENTERPRISE LINUX 5 Username Figure C 21 Login Screen Step 22 Once logged in you are ready to use the desktop see Figure C 22 2 45 Pm MB Applications Places System GCS R Le E wy Figure C 22 Ready to use the Desktop Themis Computer C 20 Appendix Optional Remote On Off Switch D 1 Remote On Off Configuration Customers i
54. ault and Full Speed 12 Mbps BIOS EHCI Hand On Select Enabled to enable BIOS Enhanced Host Controller Interface support to pro vide a workaround solution for an operating system that does not have EHCI Hand Off support When enabled the EHCI Interface will be changed from the BIOS con trolled to the OS controlled The options are Disabled and Enabled default HDA Controller Select Enabled to activate the onboard High Definition Audio controller The options are Enabled default and Disabled Reserved Page Rout Select PCI to use PCI communication mode for the USB connections Select LPC to use LPC mode for the USB connections The options are PCI default and LPC IDE SATA Configuration When this submenu is selected the AMI BIOS automatically detects the presence of the IDE devices and displays the following items SATA 1 Configuration If Compatible is selected it sets SATA 1 to legacy compatibility mode while selecting Enhanced sets SATA 1 to native SATA mode The options are Disabled Compatible and Enhanced default Configure SATA 1 as This feature allows the user to select the drive type for SATAF1 Select RAID Intel to enable Intel s SATA RAID firmware to configure Intel s SATA RAID settings Select RAID Adaptec to enable Adaptec s SATA RAID firmware to configure Adaptec s SATA RAID settings Select AHCI to enable SATA Advanced Host Interface 3 13 Themis Computer RES 22XR3 Installation Manual
55. ble the TPM jumper on the motherboard to enable TCG TPM 1 1 1 2 TPM support in order to improve data integrity and network security The options are No default and Yes If this feature is set to Yes the following items will display TPM Enable Disable Status This item displays the status of TPM Enabled Disabled state TPM Owner Status This item displays the status of TPM Ownership IPMI Configuration Intelligent Platform Management Interface IPMI is a set of common interfaces that IT administrators can use to monitor system health and to manage the system as a whole For more information on the IPMI specifications please visit Intel s website at www intel com 3 23 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 15 1 Status of BMC 3 3 16 Baseboard Management Controller BMC manages the interface between system management software and platform hardware This is an informational feature which returns the status code of the BMC micro controller View BMC System Event Log This feature displays the BMC System Event Log SEL It shows the total number of entries of BMC System Events To view an event select an Entry Number and pressing lt Enter gt to display the infor mation as shown in the screen e SEL Entry Number e SEL Record ID e SEL Record Type e Timestamp Generator ID e Event Message Format User e Event Sensor Type e Event Sensor Number e Event Dir Type e Ev
56. ccscscssscscseccesssccsenscceeeneceeees 1 10 1 53 System Reso rc AET GE 1 11 1 02 KEEP E SALATSI a 1 11 1 6 1 Slow Blinking LED for Suspend State Indicator mteee 1 11 1 6 2 Main Switch Override Mechanisme 1 12 1 6 3 Weake Oiie LAIN OW Ee 1 12 1 7 Power Supply EE 1 13 1S Super TVO e EE 1 14 1 enee Eed ege 1 15 19 41 el 1 15 1 92 Electrical EE 1 16 19 21 System POWER ceisdean a a R R kaka 1 16 19 2 2 Output NEE Ee 1 16 129 33 Eelere e 1 17 LEE Zeene AA n 1 17 1 9 3 2 Electrostatic Discharge cis sccissssccsecevssscsens secsdactasstead sade podav NEE 1 17 1 9 3 5 NOISE 2 eege eelere aan Aa 1 17 1 10 Packaging and Shipping dee eege Deeg kusi 1 19 VIOL A CCOSSOry EE 1 19 1 10 2 Rack Mount Slides Optional enne 1 20 Themis Computer vii RES 22XR3 Installation Manual Configuration 2 2 Installation and Operation een 2 1 2 1 Installation EE 2 1 2 1 1 Remove Protective Top Covet v ssissscsecasssscisisdsesesaseenscesasessaasdtessnetannccaeseees 2 1 22 Memory Te 2 3 Ee WEE 2 4 2 14 CVI EE 2 7 24 31 TASEME e EE 2 7 A E E ETLE ee EE 2 8 2 1 4 1 Removing the Lithium Battery ssecseeeeseseeseeeresrerserererrerserereeres 2 8 2 1 4 2 Installing a Lithium E EE 2 9 21 5 SATA Storage e 2 9 2 1 5 1 Opening the RES 22XR3 Front Doors sssseseseeseerreereereereeee 2 10 2 1 5 2 Storage Drive Removal seessesssesssesessseessessesseresseesssressresseesses 2 10 2 1 5 3 Storage
57. ch step is in 1 1000 of an inch The default is 400 default Press or on your keyboard to change this value Northbridge Configuration This feature allows the user to configure the settings for the Intel Northbridge chip Crystal Beach DMA Direct Memory Access This feature works in conjunction with the Intel I O AT Acceleration Technology to accelerate the performance of TOE devices Note A TOE device is a specialized dedicated processor that is installed on an add on card or a network card to handle some or all packet processing of this add on card When this feature is set to Enabled it will enhance overall system performance by providing direct memory access for data transferring The options are Enabled and Disabled default 3 11 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 6 2 3 3 6 3 3 3 6 4 3 3 7 3 3 7 1 3 3 7 2 3 3 7 3 Crystal Beach DCA Direct Cache Access This feature works in conjunction with the Intel I O AT Acceleration Technology to accelerate the performance of the TOE device When this feature set to Enabled it will enhance overall system performance by providing direct cache access for data transferring The options are Enabled and Disabled default NUMA Support Select Enabled to use the feature of Non Uniform Memory Access to improve CPU performance The options are Enabled default and Disabled Intel VT d Select
58. comprise a packing box bottom crush resistant layer and top crush resistant layer The bot tom and top crush resistant layers are identical components placed so that the side E 1 Themis Computer RES 22XR3 FIO Installation Manual with the plastic membrane is against the eguipment Top Layer Membrane 8 ra j _ Figure E 1 Packaging Components E 3 Instructions for Re Packing Re assemble the packing material about the equipment in accordance with the fol lowing instructions see Table E 2 on page E 3 Inspect the original packing materials for serviceability e Place one crush resistant layer open side down membrane side up in the bot tom of the box e Place the equipment on top of the bottom layer right side up Themis Computer Re Packing Instructions Instructions for Re Packing e Place the other crush resistant layer membrane side down open side up on top of the eguipment e Press down on the top layer to firmly compress the layers around the equip ment and allow for the box flaps to be closed e Seal the top of the box with strong packing tape wrapping the tape completely around the box both lengthwise and crosswise e Prepare for shipment in accordance with the instructions received from Themis Computer Figure E 2 Order of Assembly E 3 Themis Computer RES 22XR3 FIO Installation Manual E 4 Themis Computer Index Numerics 19
59. cs card is installed in a PCI Express slot see Figure 2 5 on page 2 7 and connect a multiscan monitor to the SVGA or DVI connector 3 Attach a PS 2 keyboard and mouse to the appropriate connectors on the rear T O panel of the RES 22XR3 Configuration 2 see Figure 1 5 on page 1 6 4 Turn the system on see previous section 2 3 3 2 Linux Installation The process of installing the Linux operating system onto the RES 22XR3 is detailed in Appendix C Red Hat Enterprise Linux 5 Installation 2 3 4 Turning the System Off Caution Before turning your system off make sure to save all open files properly close applications and broadcast a warning to all users on any active networks 1 To turn the RES 22XR3 power off press and hold the system power on off button see Figure 2 16 page 2 16 for at least four 4 seconds This will shut down the system and turn off the POWER LED As an alternative a modern operating system Windows 9x or more recent and Linux for example can turn off the system after a graceful OS software shutdown Themis Computer RES 22XR3 Installation Manual Configuration 2 2 18 Themis Computer Installation Section Chapter BIOS Setup Utility 3 1 3 1 1 Introduction This chapter describes the AMI BIOS Setup Utility for the RES 22XR3 Configura tion 2 motherboards The AMI ROM BIOS is stored in a Flash EEPROM and can be easily updated This chapter describes
60. describing 20 chassis configurations is given in Table 1 page xx A matrix describing 17 07 chassis configurations is given in Table 2 on page xxi e SuperMicro X8DTi e SuperMicro X8DTi F e SuperMicro X8DTi LN4F Figure 1 Rugged Enterprise Server Model RES 22XR3 Themis Computer xix RES 22XR3 Installation Manual Configuration 2 Table 1 RES x2XR3 20 Chassis Manual Matrix AC and DC Power Supplies cpu RES 32xR3 RES 22xR3 RES 22XR3 RES 12XR3 8 with Riser Category Motherboard Soc Manual Manual Manual kets Part Number Part Number ZE Part Number Part Number Configuration 1 aes 2 116790 024 1176789 024 9 X8DTH 6F X8DTi Configuration 2 X8DTi F 2 117022 024 117017 024 X8DTi LN4F X8DT3 Configuration 3 X8DT3 F 2 117023 024 117018 024 X8DT3 LN4F Configuration A X8DTN 2 117024 024 117019 024 Configuration 5 MODA 2 117025 024 117020 024 g X8DA3 Configuration 6 X8DAH F 2 117026 024 117021 024 Configuration 7 X8DTU F 117280 024 116970 024 Naming Key X8Dvwxyz e System RES x2XR3 where x 3 2 or 1 v A Sound chip no graphics chip T Graphics chip no sound chip Configuration 6 motherboard X8DAH F supports both audio and video however the naming key does not contain a T in the title w H Two Tylersberg Northbridge chips blank One Tylersberg Northbridge chip U Motherboard with cutout x i SATA only 3
61. dieda 3 19 Seve Lee Terminal ee ee ees 3 19 3 3 11 6 VT UTF8 Combo Key Support cee eeeeeeecceesseeeceteeeeeteeeenes 3 19 3 3 11 7 Sredir Memory Display Delai 3 19 33 12 System Health Monitor geed 3 20 3 3 12 1 CPU Overheat Alarm Ae Ae 3 20 3 3 12 2 CPU Temperature System Temperature iemeeenee 3 20 33 123 System Temperature lise t alaks 3 21 3 3 12 4 Voltage MOmtonine uusasukad 3 22 3 3 12 5 System Fan Monitor ocissscadsays svsasassssadcassnsaseiseevedeasooactaseeeeveatennns 3 22 3 3 12 6 Fanl Banne 3 22 Salk AC RE 3 22 3 3 13 1 ACPI Version Features o sccsdssasucted ious sedacsvasscctannt anes aveuenasustas 3 22 3 3 13 2 ACPI APIC Support onnenn kaeda Eed dass kivesta 3 22 E o APIS AC PIS CI TRO mamma 3 22 3 3 13 4 Headless e EE EE 3 23 3 3 13 5 High Performance Event Timer imeeenmeenenneeoenae 3 23 3 3 14 KR EE 3 23 3 3 14 1 TCG TPM Trusted Platform Module Support 3 23 3 3 15 IPM Configuration sisscccsccccvecsscisascsesnshcoaavebensnecessacastersuaaceesasceeenseasaasebevsns 3 23 23151 Status OF BMG eege Eeer 3 24 3 3 16 View BME System Event Log sissies dicscecissceccarasecsansviagdicdessaces easvanadeedeoes 3 24 3 3 16 1 Clear BMC System Event Log c cccccsscccssccesnsscsensccsenneceeses 3 24 323 07 Set LAN Con PUT AMON sates rete eee ete Aid Aces Seberang 3 25 Salk Erres 3 25 3 3 17 2 Channel Number Status ccisct cccasssassecevsssesadeviss
62. duced in any form by photocopy microfilm retrieval system or by any other means now known or hereafter invented without the prior written permission of Themis Computer The information in this publication has been carefully checked and is believed to be accurate However Themis Computer assumes no responsibility for inaccuracies Themis Computer retains the right to make changes to this publication at any time without prior notice Themis Computer does not assume any liability arising from the application or use of this publication or the product s described herein RESTRICTED RIGHTS LEGEND Use duplication or disclosure by the United States Government is subject to the restrictions set forth in DFARS 252 227 7013 tel and FAR 52 227 19 TRADEMARKS and SERVICEMARKS Themis is a registered trademark of Themis Computer Inc Intel and Xeon are registered trademarks of Intel Corporation Red Hat is a registered trademark of Red Hat Inc Linux is a registered trademark of Linus Torvalds SuperMicro is a registered trademark of Super Micro Computer Inc All other trademarks servicemarks or registered trademarks used in this publication are the property of their respective owners CE Marking CE This product complies with the European EMC Directive 2004 108 EC and the European Low Voltage Safety Directive 2006 95 EC Safety Precautions Instructions regarding safety precautions during installation opera
63. ecctaanacades ceseaartsuseae 3 25 3 3L 7 5 IP Address SOULCE 3 c8scysccsss decd scssdesccaasveoedevaegsacteavacensslepsdarasdiene 3 25 53 10 IP Address Confis ration scenei a i a 3 25 3 3 18 1 TEE 3 25 3 3 18 2 TP AAOFESS eisene ee eege 3 26 xi Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 18 3 Current IP Address in BMC vxjaceissghedgatsecssberyhcntadedanen stan aata 3 26 3 3 19 MAC Address Configuration E 3 26 3 3191 EE 3 26 33192 MAC AAATESS nni a a aa 3 26 3 3 19 3 Current MAC Address in BMC 0 0 eee eeeceeceseceeeteeeceeeeeeseeeenaes 3 26 3 3 20 Subnet Mask Configuration ammuuusammumdkusmduamamu ilusas 3 26 3 3 20 1 Parameter Selector engone Cheese 3 26 3 3 20 2 Subnet EH 3 26 E VELAN KEE 3 27 de WER POE COMM SUUTA OM EE 3 27 3 3 21 1 PEF Come SRA OW varus liita jaala alaalia ld 3 27 3 3 21 2 BMC Watch Dog Timer Action i kustutan kaunad 3 28 33 22 DML Event EE 3 28 3 39 22 1 VIEW EEN 3 28 3 3 22 2 Mark all events as WEE 3 28 33 22 Clearevent E 3 28 3 4 Securty SELES eene i ainen 3 29 3 41 Supervisor Password dE 3 29 3 4 2 User ee WEE 3 29 3 4 3 Change Supervisor ageweecht 3 29 3 4 4 User Access Level Available when Supervisor Password is set as above 3 30 3 4 5 Change RE EE 3 30 3 4 6 Clear User Password Available only if User Password has been set 3 30 JAT Password EE 3 30 3 4 8 Boot Sector Virus Protection mrtoneeteeten
64. en in Table 3 This chassis design makes it more convenient to install cables to the system and demands no access to the rear of the chassis except to replace a fan Figure 2 shows the front view of a standard rear I O RES 22 chassis Figure 3 on page xxiii shows the rear view Figure 4 shows the front view of a front I O RES 32 chassis Figure 5 shows the rear view Table 3 Front I O 16 Chassis Manual Matrix AC and DC Power Supplies CPU Mother Soc RES 32XR3 FIO Manual P N RES 22XR3 FIO Manual P N board kets X8DAH F 2 117611 024 X8DTU F 2 117664 024 Naming Key X8uvwxyz e System RES x2XR3S and RES x1XR3 where X 3 2 0t 1 RES 32XR3 FIO motherboard X8DAH F supports both audio and video however the naming key does not contain a T in the title u D Double CPU sockets S Single CPU socket v A Sound chip no graphics chip T Graphics chip no sound chip w Not applicable x i SATA only 8 SAS1 0 6 SAS2 0 y LN4 Extra gigabit Ethernet controller for two extra ports z F IPMI blank No IPMI t TU KITT iiil LLL Ce lt a ema PER Figure 2 Front View of a Standard Rear I O RES 22 Chassis Doors Removed xxii Themis Computer Preface 10 ae sg Sr Sg sn ss Iil ei Figure 3 Rear View of a Standard Rear I O RES 22 Chassis D 2IRMOIFIO mn mmm mm mm L 3 re E J 5 lt O AE AL ie LL lt een EI e
65. ent Data 3 3 16 1 Clear BMC System Event Log Select OK and press the lt Enter gt key to clear the BMC system log Select Cancel to keep the BMC System log The options are OK default and Cancel A Caution Any cleared information is unrecoverable Make absolutely sure that you no longer need any data stored in the log before clearing the BMC Event Log Themis Computer BIOS Setup Utility 3 3 17 Advanced Setup Configurations Set LAN Configuration Set this feature to configure the IPMI LAN adapter with a network address as shown in the following graphics 3 3 17 1 Channel Number Enter the channel number for the SET LAN Config command This is initially set to 1 default Press or on your keyboard to change the Channel Number 3 3 17 2 Channel Number Status This feature returns the channel status for the Channel Number selected above Channel Number is OK or Wrong Channel Number 3 3 17 3 IP Address Source 3 3 18 This features allows the user to select how an IP address is assigned to a client com puter or network device Select DHCP Dynamic Host Configuration Protocol to allow a client computer or device obtains an IP address from a DHCP server that manages a pool of IP addresses and network information on a request and grant basis Upon time out or lease expiration the IP address assigned to the client can be reas signed to a new client Select Static
66. ent rack adjust and attach the front and rear slide brackets to the outside slide section using the screws washers and nuts provided with the slide kit With all slide brackets securely attached to both the right and left outside slide sections install both sections to the inside right and inside left of a 19 rack with two bolts per bracket making sure there is adequate room for the 2 RU height 3 5 of a RES 22XR3 Configuration 2 system Carefully insert the RES 22XR3 Configuration 2 system into the 19 rack so that the inside slides on both sides of the chassis travel smoothly into the chan nels of the outside slide sections Push the system into the rack until the mounting brackets on the front of the chassis are flush with the front of the rack Secure the RES 22XR3 Configuration 2 system to the 19 rack with two bolts on each side Themis Computer Rack Mount Slide Installation Outside slide section Attach the rear long slide bracket KBE re to the outside slide section with screws OL d washers and nuts included in slide kit USU ws E ALTEA l ahi Attach the front short slide brack NSU SUL SAULI RA ach the front short slide bracket ere en Im to the outside slide section with screws ENN Sin SSL AL Im washers and nuts included in slide kit Rescue Ay e US Attach both inside slide sections to the left and right sides of the RES 22XR3 chassis with 8
67. er built in the processor the 5500 Series Processor platform is the first dual processing platform to offer the next generation point to point system interconnect interface replacing the current Front Side Bus Technology providing substantial system performance enhancement by utilizing serial link interconnections allowing for increased bandwidth and scalabil ity The IOH connects to each processor through an independent OuickPath Inter connect link Each link consists of 20 pairs of unidirectional differential lanes for transmission and receiving in addition to a differential forwarded clock A full width OuickPath interconnect link pair provides 84 signals Each processor supports two OuickPath links one going to the other processor and the other to the 5520 chip The Intel 5520 platform supports up to 36 PCI Express Gen2 lanes and the 5520 Northbridge supports peer to peer read and write transactions The ICHIOR proc vides up to 6 PCI Express ports six SATA ports and 10 USB connections In addi tion the Intel 5520 platform also offers a wide range of RAS Reliability Availability and Serviceability features These features include memory interface ECC x4 x8 Single Device Data Correction SDDC Cyclic Redundancy Check CRC parity protection out of band register access via SMBus memory mirroring memory sparing and Hot plug support on the PCI Express Interface The 5500 5600 Series CPU and the 5520 Chipset e Four processor cores
68. ert default Power Down Reset System Power Cycle OEM Action Diagnostic Inter face Alert Startup Delay This feature inserts a delay during startup for PEF alerts The options are Enabled and Disabled default PEF Alert Startup Delay This sets the pre determined time to delay PEF alerts after system power ups and resets Refer to Table 24 6 of the IPMI 1 5 Specification for more information at www intel com The options are No Delay 30 sec 60 sec 1 5 min 2 0 min Startup Delay This feature enables or disables startup delay The options are Enabled and Disabled default 3 27 Themis Computer RES 22XR3 Installation Manual Configuration 2 PEF Startup Delay This sets the pre determined time to delay PEF after system power ups and resets Refer to Table 24 6 of the IPMI 1 5 Specification for more information at www intel com The options are No Delay default 30 sec 60 sec 1 5 min 2 0 min Event Message for PEF Action This enables of disables Event Messages for PEF action Refer to Table 24 6 of the IPMI 1 5 Specification for more information at www intel com The options are Dis abled default and Enabled 3 3 21 2 BMC Watch Dog Timer Action 3 3 22 3 3 22 1 Allows the BMC to reset or power down the system if the operating system hangs or crashes The options are Disabled default Reset System Power Down Power Cycle BMC Watch Dog TimeOut Min Sec This option appears if BMC Watch
69. et A 4 Gigabit Ethernet LAN Port A 3 A 4 graphics card 2 17 I I O Connectors 1 6 Ethernet LAN Port 1 8 PS 2 keyboard 1 8 PS 2 mouse 1 8 Serial Ports 8 USB Serial Ports 1 8 I O faceplates 1 4 ICH10R Southbridge 2 ICHIOR IOH 36D xxiv Installation procedures 2 7 installing rack mount slides B memory modules 2 4 PCI cards 2 7 Instructions for Re Packing E 2 Intel 5520 Tylersburg chipset xxiv Intel 5520 chipset 2 Intel Xeon CPU xix Intel Xeon CPU 1366 pin 1 2 IPMI Dedicated LAN Port 1 8 K keys storage drive 19 Themis Computer Index L LAN Port 8 LAN port A 4 latch locks 1 4 LEDs NIC1 Gb Ethernet 7 NIC2 Gb Ethernet 7 SATA storage drives 7 system 1 4 Linux 5 Installation C Introduction C Linux Installation 2 17 lithium battery 2 installation 2 9 lithium battery and socket illustration of 2 8 removal 2 8 M Main BIOS Setup Screen 3 3 Major Components of the RES 22XR3 1 5 memory 2 memory modules ECC SDRAM 2 4 N Noise Level 7 noise reduction 7 noise specification 17 Notes xxv O Opening the RES 22XR3 Front Doors 2 10 Operating temperature 2 Output Voltage 6 Overheat LED 7 P Packaging and Shipping 19 Packing Components E PCI cards 2 1 2 7 Peripheral Support 2 pinouts serial ports A 2 USB port A 2 Plugging in and Securing the AC Power Cords 2 16 power button 1 4 button and LED 2 16 cord sockets 1 4
70. etermined Select SWDMA0 to allow the BIOS to use Single Word DMA mode 0 It has a data transfer rate of 2 1 MBs Select SWDMA1 to allow the BIOS to use Single Word DMA mode 1 It has a data transfer rate of 4 2 MBs Select SWDMA2 to allow the BIOS to use Single Word DMA mode 2 It has a data transfer rate of 8 3 MBs Select MWDMA0 to allow the BIOS to use Multi Word DMA mode 0 It has a data transfer rate of 4 2 MBs Select MWDMAT to allow the BIOS to use Multi Word DMA mode 1 It has a data transfer rate of 13 3 MBs Select MWDMA2 to allow the BIOS to use Multi Word DMA mode 2 It has a data transfer rate of 16 6 MBs 3 15 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 16 3 3 8 8 3 3 8 9 Select UDMA0 to allow the BIOS to use Ultra DMA mode 0 It has a data transfer rate of 16 6 MBs It has the same transfer rate as PIO mode 4 and Multi Word DMA mode 2 Select UDMA to allow the BIOS to use Ultra DMA mode 1 It has a data transfer rate of 25 MBs Select UDMA2 to allow the BIOS to use Ultra DMA mode 2 It has a data transfer rate of 33 3 MBs Select UDMA3 to allow the BIOS to use Ultra DMA mode 3 It has a data transfer rate of 66 6 MBs Select UDMA4 to allow the BIOS to use Ultra DMA mode 4 It has a data transfer rate of 100 MBs Select UDMAS to allow the BIOS to use Ultra DMA mode 5 It has a data transfer rate of 133 MBs Select UDMAS to allow the BIOS to use Ultra DMA mode 6 I
71. f the two C 15 Themis Computer RES 22XR3 Installation Manual Configuration 2 To select a component click on the checkbox beside it RED HAT ENTERPRISE LINUX 5 The default installation of Red Hat Enterprise Linux Server includes a set of software applicable for general internet usage What additional tasks would you like your system to include support for O Software Development Web server You can further customize the software selection now or after instali via the software management application Customize jater Customize now D petease Notes Back j Next Figure C 16 Package Installation Default Screen Step 17 Select each component you wish to install Once a package group has been selected if optional components are available you can click on Optional packages to view which packages are installed by default and to add or remove optional packages from that group see Figure C 17 on page C 17 If there are no optional components this button will be disabled Themis Computer Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Applications 32 KDE K Desktop Environment Development Servers Base System Languages GNOME is a powerfut graphical user interface which includes a panel desktop system Icons and a graphical file manager 32 of 36 optional packages selected Optional packages Betease Notes tax next
72. figuration 2 Open Top View Themis Computer 1 5 RES 22XR3 Installation Manual Configuration 2 1 2 System LEDs and I O Connectors All RES 22XR3 system LEDs are located on the front panel see A Figure 1 5 all T O connectors are located on the rear panel see B Figure 1 5 LEDs are described in Table 1 3 on page 1 7 I O connectors are described in Table 1 4 page 1 8 Front Panel Doors Removed lt mn mmm F HAAVAL ALAL HERE Oe Ree EN lS 7 3 R ENET ENET 4 DL lt gt lt Hard Disk Power Power NIC1 NIC2 Overheat Power ON OFF A Drives Fail Fail Fan Fail Button PS1 PS2 PS1 PS2 Left Power Right Power Supply Supply Rear Panel ps ees Gigabit Ethernet I O Connectors i g IPMI Dedicated LAN TANG id S Green PS 2 Mouse M 1 Port PS 2 Keyboard USBI top CO or VGA Port LAN E fot u Kee Port USBO bottom i X8DTi F X8DTi LN4F motherboards only X8DTi LN4F motherboard only Figure 1 5 RES 22XR3 Configuration 2 System LEDs and UO Connectors 1 6 Themis Computer Overview and Specifications System LEDs and I O Connectors Table 1 3 System LEDs LED Description Power e Indicates that the system is turned on Storage Drive e Indicates SATA II hard drive activity NIC1 Gb Ethernet e Indicates network activity on LAN 1 NIC2 Gb Et
73. ge ed doves A als Eed 3 5 3 3 1 3 AddOn ROM Display Mode aie us ka klaad a 3 6 3 3 1 4 Bootup Num Lock i4 s ga tunv skedevtkkseed ines eeta j et e khk ENEE 3 6 335125 Wait For RU TE EO siccccssiccsastsecesesasnnecedesesenstensnsaaeenrvevaatenetiners 3 6 3 3 1 6 Hit Del Message Display aaa anna 3 6 3 3 17 Mnterr pt RE 3 6 3 3 2 Power Configuration sseeesesssesessseessresseesseeeseessseessresserssersseeessseesseesseeeset 3 6 3 3 2 1 Power Button Function aere eegener 3 6 3 3 2 2 Restore on AC EE 3 7 Se Watek Dos Ke 3 7 3 3 3 Processor and Clock RE 3 7 e e Er ab GE GE 3 7 3 3 3 2 Hardware Prefetcher Available when supported by the CPU 3 7 3 3 3 3 Adjacent Cache Line Prefetch Available when supported by the CPU An 3 7 3 3 3 4 Intel Virtualization Technology Available when supported by the CPU mmemee 3 7 3 3 3 5 Execute Disable Bit Capability Available when supported by the OS and the CPU 3 8 3 3 3 6 Simultaneous Multi Threading Available when supported by the CPU imemme 3 8 3 3 3 E E 3 8 3 3 3 8 Intel Speed Step Technology ilusaks ae 3 8 3 3 3 9 TE EES EAST KEE 3 8 3 3 3 10 Clock Spread Spectrum sesisparesvikvssaevann esa kiip val ikak e koka seav kokad 3 9 3 3 4 Advanced Chipset Control 554 eeki aatal Eed 3 9 SrO ABIES Ee E E E EE EE E A EE 3 9 3 3 9 QPI PRC QUI CY E 3 9 3 3 5 2 QPI EOS and E ET 3 9 oie Memory TEC UCTION aere iere eeh
74. gs tte st et eege voldik aids atdesavenctasiadombans 3 5 Figure 3 3 Security Settings Screen isc cisiceededssivesacsonesdeics seta acejasndndscdabedsdasieasaagensevereecueme 3 29 Themis Computer XV RES 22XR3 Installation Manual Configuration 2 Figure 3 4 Bobi SSCS ee 3 31 Figure 3 57 EM tatt hcroo et ee Eden ad aasad 3 32 Figure 3 6 AMI FLSH Hepertermnal ee 3 37 Figure 3 7 ROM File Extraction Soreemusakss paate eakat 3 37 Figure 3 8 FLASH bert ee Een 3 38 Figure A L bor Eeer A 2 Figure A 2 COM1 COM2 Serial Connector EEN A 2 Figure A 3 RES 22XR3 SVGA Connector Pinout ss sessseessesesseessesereseessessrsseesseeseesees A 3 Figure A 4 Ethernet Connector Type RJ45 esseseessesesseseesesseeerssrsresesseseesessessrsseseesesse A 4 Figure B 1 Screw Locations for Rack Mount Slides mmrreennneneennnnnneeeennna B 1 Figure B 2 RES 22XR3 Rack Mount Slide Installation etenreneee B 3 Figure C 1 Power On after Linux DVD is Inserted into Drive metmeeee C 2 Figure C 2 Skip EE C 2 Figure C 3 Welcome Screetisss EE C 3 Figure C 4 Language Selection ic s ien Eed deed deele CA Figure C 5 Selecting Layout Tee untsi EA EE C 5 Figure C 6 Enter Installation Numbers eat a C 6 Figure C27 gt RH eege ee AE el ng EE and samara C 7 Figure C 8 Reviewing Opting ys vaxore katalaani tu tying Savesicass laulul sense tala hindu kilisi C 8 Figure C 9 Creating a Cust
75. hernet e Indicates network activity on LAN 2 ENET 1 Power Fail e Warns that there is a failure in the upper power lt coe gt Upper Power Supply supply ENET2 Power Fail e Warns that there is a failure in the lower power lt eoe gt Lower Power Supply supply O ro Om Overheat Fan Fail Normally OFF RED light when tem perature limits are ex ceeded e Warns that the system is exceeding specified temperature parameters The CPU overheat warning function must be enabled in the BIOS thus allowing the user to define an overheat temperature which when exceeded trig gers the overheat warning LED Symbol Rear Panel LED s Description Each Ethernet port contains two LEDs e The color of the left LED when facing the port indicates the LAN connection speed N A LAN1 and LAN2 Off 10 MHz Green 100 MHz Amber 1 GHz e The right LED when lit indicates LAN activity a NIC Network Interface Controller Themis Computer RES 22XR3 Installation Manual Configuration 2 Table 1 4 I O Connectors Connector Description PS 2 Mouse e 6 pin mini DIN female connector to attach a PS 2 mouse device PS 2 Keyboard e 6 pin mini DIN female connector to attach a PS 2 keyboard device e Two 4 pin USB connectors to attach serial devices to USB Port 0 and USB 0 and USB 1 USB Port 1 Hi Speed USB 2 0 Note Two 2x5 pin USB type A headers 2 ports each USB4 U
76. hnology allows the system to automat ically adjust processor voltage and core freguency in an effort to reduce power consumption and heat dissipation Please refer to Intel s web site for detailed information The options are Disable Disable GV3 and Enable Enable GV3 default Intel C STATE Tech If enabled C State is set by the system automatically to either C2 C3 or C4 state The options are Disabled default and Enabled Themis Computer BIOS Setup Utility Advanced Setup Configurations 3 3 3 10 Clock Spread Spectrum 3 3 4 3 3 5 3 3 5 1 3 3 5 2 3 3 5 3 3 3 5 4 Select Enable to use the feature of Clock Spectrum which will allow the BIOS to monitor and attempt to reduce the level of Electromagnetic Interference caused by the components whenever needed The options are Disabled default and Enabled Advanced Chipset Control The items included in the Advanced Settings submenu are listed below CPU Bridge Configuration QPI Links Speed This feature selects QPI s data transfer speed The options are Slow mode and Full Speed default QPI Frequency This selects the desired QPI frequency The options are Auto default 4 800 GT 5 866GT 6 400 GT QPI LOs and L1 This enables the QPI power state to low power LOs and L1 are automatically selected by the motherboard The options are Disabled default and Enabled Memory Frequency This feature forces a DDR3 frequency slower than what the
77. iguration 2 for the purpose of sliding the unit in and out of a rack Mounting slides are optional and can be ordered at the time of purchase Approximate weights of models in the RES series of computers are listed in Table 1 7 To learn how to install rack mount slides refer to Appendix B Rack Mount Slide Installation Table 1 7 Approximate Weights of the RES Series Weight CPU SE Model Approximate Sockets Depth Description RES 12XR3 19 5 Ibs 8 9 kg 2 20 Includes e All CPU sockets filled e 6 DIMMs RES 12XR3 S 17 7 7 kg 2 17 e 2 storage drives e 2 PCI cards e 1 CD RW DVD ROM drive RES 11XR3 16 5 Ibs 7 5 kg 1 17 e 2 power supplies RES 22XR3 25 Ibs 11 4 kg 2 20 Includes A e All CPU sockets filled RES 22XR3 S 23 Ibs 10 4 kg 2 17 SEN eg e 2 storage drives e 2 PCI cards RES 22XR3 FIO 25 3 Ibs 11 5 kg 2 16 S iC RI DE BOM E e 2 power supplies RES 21XR3 22 5 Ibs 10 2 kg 1 17 RES 32XR3 28 5 Ibs 12 9 kg 2 20 Includes e All CPU sockets filled RES 32XR3 S 26 5 Ibs 12 0 kg 2 17 EDINME e 2 storage drives e 2 PCI cards RES 32XR3 FIO 29 0 Ibs 13 2 kg 2 16 E e MGE e 2 power supplies RES 31XR3 26 Ibs 11 8 kg 1 17 Themis Computer Installation Section Chapter Installation and Operation This chapter describes e How to install a memory module storage drive PCI card 60 mm fan power supply and lithium battery e Rack mount brackets e
78. improve the RES 22XR3 Installation Manual Configuration 2 Please take time to let us know what you think about this manual Information provided in the manual was complete Agree___ Disagree___ Not Applicable___ Information was well documented and easy to follow Agree Disagree Not Applicable___ Information was easily accessible Agree Disagree Not Applicable The manual was useful Agree Disagree Not Applicable Please write down any comments you may have about this manual including how it can be improved Name Title Company Address
79. intended for an experienced system administrator with a knowledge of both networking and high speed server systems Website Information Themis Computer corporate and product information may be accessed on the World Wide Web by browsing the website http www themis com Your Comments are Welcome We are interested in improving our documentation and welcome your comments and suggestions You can email your comments to us at docfeedback Othemis com Please include the document part number in the subject line of your email Themis Computer Preface Notes Cautions Warnings and Sidebars Notes Cautions Warnings and Sidebars The following icons and formatted text are included in this document for the reasons described Note A note provides additional information concerning the procedure or action being described erator or equipment This may involve but is not restricted to heavy equipment or t Caution A caution describes a procedure or action that may result in injury to the op sharp objects To reduce the risk follow the instructions accompanying this symbol operator or eguipment as a result of hazardous voltages To reduce the risk of elec Warning A warning describes a procedure or action that may cause injury to the trical shock and danger follow the instructions accompanying this symbol Sidebar A sidebar adds detail to the section within which it is placed but is not abs
80. ion 2 General Specifications eee eeeeeeeeeeeeeees 1 15 Table 1 6 RES 22XR3 Electrical Specifications eer Eege eerge 1 16 Table 1 7 Approximate Weights of the RES Series iieeeemeonevneevanneeonuene 1 20 Table 2 1 RES 22XR3 Memory Capacity aggies idee Zeg e Deg ien dee r 2 3 Table 2 2 RES 22XR3 Memory Population 00ennvavenast vanaoonavaoenaves enav ee enavee en 2 3 Table A 1 PS 2 Keyboard Mouse Pinouts and Signal Definitions 0 0 0 0 eeeeeeeeeees A 1 Table A 2 USB Connector PIMBULS iiei oiii a cots pead vaada E E EENIA A 2 Table A 3 COM 1 COM2 Serial Connector Pinouts mereeeeeneeeneneeenneeeee A 2 Table A 4 RES 22XR3 SVGA Connector Pin Signals ssssessesseeeseeesseessersseresssesssees A 3 Table A 5 RJ45 Ethernet Pinout Signals imeeereeeonneeoonneeoonneeenneeoonneeenneee et A 4 Themis Computer xvii RES 22XR3 Installation Manual Configuration 2 xviii Themis Computer Preface This document entitled RES 22XR3 Installation Manual Configuration 2 pro vides instructions on how to install configure power up and boot the Themis Rug ged Enterprise Server RES 22XR3 Configuration 2 see Figure 1 which is based on two 64 bit Intel 5500 Series Xeon Quad Core processors or two Intel 5600 Series Xeon Ouad to Six Core processors RES 22XR3 Configuration 2 supports one of three motherboards in a 20 chassis a matrix
81. le a warning is given or an error message is sent to the screen Users can adjust the voltage thresholds to define the sensitivity of the voltage monitor Fan Status Monitor with Firmware Control The PC health monitor can check the RPM status of the cooling fans The onboard CPU and chassis fans are controlled by Thermal Management in the BIOS under Hardware Monitoring in the Advanced section Environmental Temperature Control The thermal control sensor monitors the CPU temperature in real time and will turn on the thermal control fan whenever the CPU temperature exceeds a user defined threshold The overheat circuitry runs independently from the CPU Once it detects that the CPU temperature is too high it will automatically turn on the thermal fan Themis Computer Overview and Specifications ACPI Features control to prevent any overheat damage to the CPU The onboard chassis thermal circuitry can monitor the overall system temperature and alert users when the chassis temperature is too high A Caution To avoid possible system overheating please be sure to provide adequate airflow to your system System Resource Alert This feature is available when used with Supero Doctor III in the Windows OS envi ronment or used with the Supero Doctor II in Linux Supero Doctor is used to notify the user of certain system events For example you can also configure Supero Doc tor to provide you with warnings when the system
82. lity BIOS Recovery 3 Once the USB drive LED is on release the lt Ctrl gt and lt Home gt keys AMI BIOS will issue beep codes to indicate that the BIOS ROM file is being updated 4 When BIOS flashing is completed the computer will reboot Do not interrupt the flashing process until it is completed 3 7 3 Boot Sector Recovery from an IDE CD ROM This process is almost identical to the process of Boot Sector Recovery from a USB device except that the BIOS image file is loaded from a CD ROM Use a CD R or CD RW drive to burn a CD with the BIOS image file in it and name the file SUPER ROM for the recovery process to load the file 3 7 4 Boot Sector Recovery from a Serial Port Serial Flash This process also known as Serial Flash allows the user to use a serial port to load a BIOS image for Boot Sector recovery This feature is usually used for embedded systems that rely on a serial port for remote access and debugging Requirements In order to use Serial Flash for Boot Sector Recovery you will need to meet the fol lowing requirements e The Target system the system that needs BIOS updates must have a serial port and Serial Flash support embedded in the BIOS image file e The Host system should also have a serial port and a terminal program that supports XModem Transfer protocol Hyper Terminal for the Windows oper ating systems and minicom for Linux FreeSBD etc e A Null modem seri
83. ly into an empty slot with the extraction handle facing to the right and the power LED at the top see Figure 2 13 Power LED AC Outlet Knurled Captive Screw Power Supply Locking Lever GK Knurled Captive Screw Power Supply TT Locking Bracket Extraction Handle Figure 2 13 The RES 22XR3 Power Supply Locking Mechanism 2 Push the power supply carefully into its slot until it is firmly seated a click will be heard when the locking lever is securely fastened to the chassis 3 Replace the power supply locking bracket removed in Step 1 page 2 13 and tighten the two knurled captive screws to firmly secure both power supplies see Figure 2 13 2 14 Themis Computer Installation and Operation Rack Mounts 2 2 Rack Mounts 2 2 1 Mounting Brackets The rack mount brackets flanges are used to secure the chassis to the 19 rack see Figure 2 14 Handles are used to pull the RES 22XR3 from the rack when rack mount slides have been installed on the sides of the chassis see following section Right Mounting Bracket Figure 2 14 Right Rack Mount Bracket 2 2 2 Hack Mount Slides Optional Rack Mount Slides can be mounted on each side of the RES 22XR3 Configuration 2 for the purpose of sliding the unit in and out of a rack Mounting slides are optional and should be ordered at the time your system is purchased To learn how to install rack mount slides refer to Appendix B Rack Mo
84. move linux partitions on selected drives and create defautt layout Use free space on selected drives and create default layout Create custom layout Advanced storage configuration J Reytew and modify partitioning layout B Release Notes Back Sr Next Figure C 8 Reviewing Option Click Next once you have made your selections to proceed Step 9 If you chose one of the automatic partitioning options and selected Review you can either accept the current partition settings click Next or modify the setup using Disk Druid the manual partitioning tool If you chose to create a custom layout you must tell the installation program where to install Red Hat Enterprise Linux This is done by defining mount points for one or more disk partitions in which Red Hat Enterprise Linux is installed You may also need to create and or delete partitions at this time see Figure C 9 on page C 9 C 8 Themis Computer Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Drive dev sda 10237 MB Model VMware Virtual S aa KS A Lee E KCL e TL ae Dn Mount Point Size Device RAID Volume Type Format imp Start End Vv LVM Volume Groups VolGroupoo 10080 Li LogVo101 swap 1984 Logvol0G ex 8096 ST Hari Nrives 1 Hide RAID device LVM Volume Group members LO nisa nocas ome ener Figure C 9 Creating a Custom Layout Click Next Step 10 Once you have configured your
85. move the lithium battery 1 Make sure the system is powered off see Operation on page 2 16 2 Locate the lithium battery socket and squeeze the latch see A Figure 2 7 together until the battery lifts out of its socket Battery Latch W OAS Ris A Torelease sgueeze battery latch together B and remove battery from socket Figure 2 7 The RES 22XR3 Configuration 2 Lithium Battery and Socket 2 8 Themis Computer Installation and Operation Installation Procedures 3 Remove the old battery and replace with a new battery see next section 2 1 4 2 Installing a Lithium Battery Perform the following steps to insert a new lithium battery 1 Tilt the replacement battery into the empty socket so that it is angled under the battery latch see B Figure 2 7 2 Carefully press down on the battery until it clicks firmly into place Note The battery location is dependent on which motherboard is in stalled in the chassis Figure 2 5 on page 2 7 shows the location of the bat tery on the X8DA3 Motherboard 2 1 5 SATA II Storage Drive Perform the following steps to remove and install a SATA II storage drive The front doors of the RES 22XR3 Configuration 2 must be unlocked and opened to access the storage drives see Figure 2 8 Knurled Screw AAAAAAA EE 2 ml ee HUE K CITE d PTE EEEELECEEEEELLE E UU Figure 2 8 Opening the RES 22XR3 Front Bezel Doors II drives the
86. mp Play Select No to allow the AMI BIOS to configure all devices in the system PCI Latency Timer This feature sets the latency Timer of each PCI device installed on a PCI bus Select 64 to set the PCI latency to 64 PCI clock cycles The options are 32 64 default 96 128 160 192 224 and 248 PCI IDE Bus Master When enabled the BIOS uses PCI bus mastering for reading writing to IDE drives The options are Disabled and Enabled default Slot 1 Option ROM Slot 6 Option ROM Select Enabled to enable Slot 1 Option ROM Slot 6 Option ROM which will allow you to boot the computer from a PCI device installed on a PCI slot The options are Disabled and Enabled default LAN1 PXE LAN2 PXE LAN3 PXE LAN4 PXE LN3 PXE LN4 PXE for LN4 models only Select Enabled to enable the onboard LAN1 LAN2 PXE Option ROMs This is to boot computers using a network interface The options are Enabled and Disabled default 3 17 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 10 Super IO Device Configuration 3 3 10 1 Onboard Floppy Controller Select Enable to enable the onboard Floppy Controller The options are Enabled default and Disabled 3 3 10 2 Floppy A Floppy B This feature allows the user to select the type of floppy drive connected to the system as specified The options are Disabled 360KB 5 1 4 1 2MB 5 1 4 720KB 3 1 2 1 44MB 3 1 2 and 2 88MB 3 1 2 The default setting for Fl
87. ne enne 3 30 De AIDAS OM SULADES Ui E 3 31 3 31 Boot Device Priority esensina sence R E kolki 3 31 ENKE aaa 3 31 2 9 35 EE 3 32 354 CDIDVD DIVES nasacunuadinnnnaiisiaadsandiiaununudaidmanh 3 32 3 05 EX OPUONS ee EA Ee 3 32 341 Save Changes and ERU TE 3 33 3 6 2 Discard Changes and Exit scisiseceisisessacsacoassevaseevensans soacdasseceton thevaatebenseeeasens 3 33 30 30 DISC ARC KC Han OS ee EE 3 33 3 6 4 Load Optimal Tetange iiss idasaczenssysictavenacedcnvenbendabedstcyGieceedendeetiedaiteancedaers 3 33 3 6 5 Load Fail Safe Defaults erwkovvtsvivvaetv vajav anedg n ke saed kukesevu Ee 3 33 xii Themis Computer Table of Contents 3 1 BIOS EE 3 34 3 7 1 How to Recover the AMIBIOS Image Main BIOS Block 3 34 3 7 2 Boot Sector Recovery from a USB Device mimiieereeaeennaeeenneeee 3 34 3 7 3 Boot Sector Recovery from an IDE CD ROM mmimmeemeeemeee 3 35 3 7 4 Boot Sector Recovery from a Serial Port Serial Flash 3 35 Appendix A Connector Pinout 0 cccccccccesscecesececesececseecsceecseeecseeecseeecseeeesaes A 1 A l PS 2 Keyboard and Mouse gcaccassecctaatesvetsnavasaceesedseceannandte kohane kaisa daa jada eng A 1 PD VUSB POTS EE A 2 4 3 Seal EE A 2 PEAS VGA Montor POTU Silina teise Lusika Jaksi e e a East Jass a s Sh A 3 A 5 Gigabit Ethernet LAN Port GE A 4 A 6 TIPMI Dedicated LAN Port Torrene ean a a aa aaa A 4 Appendix B
88. nterested in installing an optional switch from which to remotely turn the RES 32XR3 Configuration 2 on or off are able to order a Remote On Off Switch module that is easily installed in an available storage drive bay see Figure D 1 which shows the Remote On Off Switch installed in an RES 32XR3 FIO system RES 32XR3 FIO Remote On Off Switch Module Figure D 1 Remote On Off Switch Module D 1 Themis Computer RES 32XR3 Installation Manual Configuration 2 D 2 D 3 D 2 The Remote On Off Switch module is installed after first removing one of the exist ing RES 32XR3 storage drives any except the boot drive then installing a cable with a standard male DB9 connector at one end and an On Off switch an LED is optional at the other end When operational if the RES 32XR3 Configuration 2 is turned OFF pressing the remote switch ON will turn the system on If the RES 32XR3 Configuration 2 is turned ON pressing the switch OFF for less than 4 seconds will gracefully shut down the system through the BIOS pressing the switch OFF for 4 seconds or more results in a hard power off equivalent to pull ing the plug on the system Remote On Only Configuration When the Remote On Off Switch module is configured as an ON only device if the RES 32XR3 Configuration 2 is turned OFF pressing the remote switch ON will turn the system on Turning the RES system off however requires pressing the ON OFF button that is
89. o the CPU 2 The information provided above is for your reference only For more information on thermal management please refer to Intel s Web site atwww Intel com 3 3 12 3 System Temperature The system temperature will be displayed in degrees in Celsius and Fahrenheit as it is detected by the BIOS 3 21 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 3 12 4 Voltage Monitoring CPU1 Vcore CPU2 Vcore CPU1 DIMM CPU2 DIMM 1 5V 3 3Vcc V 3 3V SB V 12Vcc V 5Vin and Battery Voltage 3 3 12 5 System Fan Monitor This feature allows the user to decide how the system controls the speeds of the onboard fans The CPU temperature and the fan speed are correlative When the CPU on die temperature increases the fan speed will also increase and vice versa Select Workstation if your system is used as a Workstation Select Server if your system is used as a Server Select Disabled Full Speed 12V to disable the fan speed control function and allow the onboard fans to constantly run at the full speed 12V The Options are Disabled full speed default 4 pin Server 4 pin Workstation 4 pin Quiet and 4 pin Super Quiet 3 3 12 6 Fani Fan 8 Reading 3 3 13 This feature displays the fan speed readings from fan interfaces Fan through Fan8 Fan7 is CPU1 Fan and Fan8 is CPU2 Fan ACPI Configuration Use this feature to configure Advanced Configuration and Power Interface ACPI
90. olutely vital to the description or procedure of the section XXV Themis Computer RES 22XR3 Installation Manual Configuration 2 xxvi Themis Computer General Section Chapter Overview and Specifications 1 1 Overview The RES 22XR3 Configuration 2 see Figure 1 1 below a block diagram is given in Figure 1 2 page 1 3 is a rack mounted system designed for above average shock and vibe environments The RES 22XR3 supports dual Intel 64 bit Xeon proces sors with QPI up to 6 4 GT s with up to 192 GB of DDR3 ECC Registered mem ory and has many computer and graphics intensive and diverse I O capabilities ideal for military aerospace and commercial telecommunications applications Options supported by the RES 32XR3 are listed in Table 1 1 on page 1 2 Figure 1 1 RES 22XR3 Configuration 2 1 1 Themis Computer RES 22XR3 Installation Manual Configuration 2 Table 1 1 RES 22XR3 Configuration 2 Motherboard Options PCl e PCI X and PCI Slots Motherboard IPMI SATA sas Memory Graphics Audio Slots p PCl e PCl e PCl e PCI X PCI x16 x8 x4 X8DTi Yes 12 Yes 1 2 1 ER X8DTi F Yes Yes 12 Yes 1 2 1 ER X8DTi LN4F Yes Yes 12 Yes 1 2 1 Ee a Super Micro Computer Inc b Two 32 bit 33 MHz PCI slots The RES 22XR3 is designed within a 2RU high 3 5 form factor 20 50 8 cm deep
91. om Layout E C 9 Figure C 10 Setting Up Boot E C 10 Figure C 11 Master Boot Record MBR cecceeseeeseeesseceseceeeeeeceeeaceceaeceseeeseecnaeeneeesaes C 11 Figure C 12 Network Devices List saakski oO C 12 Figure C 13 Edit Interface Pop Up Screen ausammast C 13 Figure 14 S l c ne Time Zone ere C 14 Figure C 15 Setting Up Root Account and Password C 15 Figure C 16 Package Installation Default Screen C 16 Figure C 17 Optional Pack ag sisassoucsvatssers tund okk jva vaatad taak krahv ee dee ue C 17 xvi Themis Computer Table of Contents Figure C 18 Option to Review or Continue 0 ese eceecessecesecneeeeeeeeeeecsseceaecaeeeaeeeeeeeeenaees C 18 Figure C 19 Installation Begins s 01550cise ches gheet beet edel at dou audience hase eege C 18 Figure C 20 Installation is Complete 1 iisiatvitvesa tuitidavkatravkutk lkd keh kuda tk ukaas tkase vide C 19 teuer EIERE eg C 20 Figure C 22 Ready to use the Desktopi seisata urna oe peaaegu aaakaekav idas kike upakile C 20 Figure D 1 Remote On Off Switch Module D 1 Figure E 1 Packaging Components enne E 2 Figure E 2 Order ol Assembly aatatel ojamaa E 3 List of Tables Table 1 1 RES 22XR3 Configuration 2 Motherboard Options sssssssesssssessresseessesssee 1 2 Table 1 2 Major Features of the RES 22XR3 Configuration 2 1 2 Table 1 3 System LEDS ei na ee tasakaal amaan tal Shiga a kei 1 7 Table 1 4 UO COMnectors 8 lelle laia i E ee 1 8 Table 1 5 RES 22XR3 Configurat
92. oot device 4th boot device 5th boot device and Disabled e Ist Boot Device Ist Floppy Drive e 2nd Boot Device USB XXXXXXXXX 3 5 2 Storage Drives This feature allows the user to specify the boot sequence from all available storage drives The settings are Disabled and a list of all storage drives that have been detected i e Let Drive 2nd Drive 3rd Drive etc 3 31 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 5 3 Removable Drives This feature allows the user to specify the boot seguence from available Re the sequence of priority for the Boot Device movable Drives The settings are 1st boot device 2nd boot device and Disabled e Ist Drive 1st Floppy Drive e 2nd Drive USB XXXXXXXXX 3 5 4 CD DVD Drives This feature allows the user to specify the boot sequence from available CD DVD Drives 4 e 1st Drive 2nd Drive etc 3 6 Exit Options Select the Exit tab from the AMI BIOS Setup Utility screen to enter the Exit BIOS Setup screen Save Changes and Exit Figure 3 5 Exit Options 3 32 Themis Computer BIOS Setup Utility 3 6 1 3 6 2 3 6 3 3 6 4 3 6 5 Exit Options Save Changes and Exit When you have completed the system configuration changes select this option to leave the BIOS Setup Utility and reboot the computer so the new system configura tion parameters can take effect Select Save Changes and Exit from the Exit menu and pres
93. oppy A is 1 44MB 3 1 2 default and for Floppy B is Disabled default 3 3 10 3 Serial Port1 Address Serial Port2 Address This option specifies the base I O port address and the Interrupt Request address of Serial Port 1 and Serial Port 2 Select Disabled to prevent the serial port from access ing any system resources When this option is set to Disabled the serial port physi cally becomes unavailable Select 3F8 IRQ4 to allow the serial port to use 3F8 as its T O port address and IRQ 4 for the interrupt address The options for Serial Port are Disabled 3F8 IRQ4 default 3E8 IRQ4 2E8 IRQ3 The options for Serial Port2 are Disabled 2F8 IRQ3 default 3E8 IRQ4 and 2E8 IRQ3 Serial Port 2 Mode Use this feature to configure Serial Port 2 mode The options are Normal default IrDA and ASK IR IrDA Infrared Data is an industry standard for remote control devices ASK IR Amplitude Shifted Keying Infrared is a protocol compatible with Sharp branded PDAs and other infrared devices 3 3 10 4 Watch Dog Timer If enabled the Watch Dog Timer will allow the system to reboot when it is inactive for more than 5 minutes The options are Enabled and Disabled default 3 3 11 Remote Access Configuration 3 3 11 1 Remote Access This allows the user to enable the Remote Access feature The options are Disabled default and Enabled Themis Computer BIOS Setup Utility Advanced Setup Configurations If Remote Access i
94. ot failure 3 1 3 2 How to Recover the AMIBIOS Image Main BIOS Block An AMIBIOS ash chip consists of a boot sector block and a main BIOS code block a main BIOS image The boot sector block contains critical BIOS code including memory detection and recovery code to be used to ash a new BIOS image if the orig inal BIOS Image is corrupted When the system is powered on the boot sector code executes first Once it is completed the main BIOS code will continue with system initialization and complete the bootup process Note BIOS Recovery described below is used when the main BIOS block crash es However when the BIOS Boot sector crashes you will need to send the moth erboard back to Supermicro for RMA repairs Boot Sector Recovery from a USB Device This feature allows the user to recover a BIOS image using a USB device without additional utilities needed A user can download the BIOS image into a USB flash device and name the file SUPER ROM for the recovery process to load the file A USB ash device such as a USB Flash Drive a USB CDROM or a USB CDRW device can be used for this purpose 1 Insert the USB device that contains the new BIOS image the ROM files saved in a root directory into your USB drive 2 While turning the power on press and hold lt Ctrl gt and lt Home gt at the same time until the USB Access LED Indicator comes on This might take a few seconds Themis Computer BIOS Setup Uti
95. p Only Temperature Hysteresis is the temperature lag in degrees Celsius after the set DIMM temperature threshold is reached before Closed Loop Throttling begins The options are Disabled 1 50C default 3 00C and 6 00C Guardband Temperature Closed Loop Only This is the temperature which applies to the DIMM temperature threshold Each step is in 0 50C increment The default is 006 default Press or on your key board to change this value Inlet Temperature This is the temperature detected at the chassis inlet Each step is in 0 50C increment The default is 070 Press or on your keyboard to change this value Themis Computer BIOS Setup Utility 3 3 6 3 3 6 1 Advanced Setup Configurations Temperature Rise This is the temperature rise to the DIMM thermal zone Each step is in 0 50C incre ment The default is 020 default Press or on your keyboard to change this value Air Flow This is the air ow speed to the DIMM modules Each step is one mm sec The default is 1500 default Press or on your keyboard to change this value Altitude This feature defines how many meters above or below sea level the system is located The options are Sea Level or Below default 1 300 301 600 601 900 901 1200 1201 1500 1501 1800 1801 2100 2101 2400 2401 2700 2701 3000 DIMM Pitch This is the physical space between each DIMM module Ea
96. plains how to install the DDR3 Memory Modules 1 Loosen and remove the eight screws securing the air flow deflector and PCI card retainer bracket in the following manner see Figure 2 2 e Screw A After removing Screw A remove the PCI card retainer bracket and store it in a safe place e Screw B Remove the seven screws marked B in Figure 2 2 which will loosen the air flow diverter so that it can be removed from the system Fee gt 8 PCI Card Retainer Bracket Figure 2 2 Remove the Air Flow Deflector Screws 2 4 Themis Computer Installation and Operation Installation Procedures e After the air flow diverter has been removed the memory module slots will be exposed see Figure 2 3 A Wan P2 DIMM 1B ll Frill aaa 3 Ze a P2 DIMM 1A cy P2 DIMM 2B Branch 1 lt Branch 0 Ee ill P2 DIMM 2A Ta P2 DIMM 3B Branch 2 P2 DIMM 3A pee Branch 0 lt W TUTTI TMT ett PU 1 Socket mee ET P1 DIMM 3B Adi Val ie ee i REINIMAA M AMA Figure 2 3 Memory Module Slot Locations 2 If a module is already seated in the slot you have selected for installation remove it by gently pressing down and outward on the latches at both ends of the slot see Figure 2 4 on page 2 6 then pulling the old module directly up from the slot until it is free of the connector see Figure 2 4 2 5 Themis Computer RES 22XR3 Installation Manual Configuration 2 Press latch downward 8 outward
97. re 1 3 External Features of the RES 22XR3 Front and Rear The RES 22XR3 front panel houses eight removable storage drives see Figure 1 3 In addition the front panel supports a CD RW DVD ROM combo slimline drive All motherboards support SATA II drives only Also included on the front panel is a system power ON OFF button and LEDs see Figure 1 5 on page 1 6 The rear panel contains I O faceplates for seven PCI cards of which only six are used graphics RAID NIC etc two AC power supplies with latch locks and power cord sockets and all I O connectors see Figure 1 5 Major internal components of the RES 22XR3 Configuration 2 can be seen in the open top view cover removed of Figure 1 5 on page 1 6 Major features of the RES 22XR3 are described in Table 1 2 page 1 2 Major inter nal components are seen in the open top view of Figure 1 4 on page 1 5 Themis Computer Overview and Specifications Overview Air Flow Deflector 12 DIMM Memory Modules and 2 CPUs underneath Power Supply 1 of 2 Lithium Battery hb s ta PCI Slot 1 PCI 32 bit 33 MHz E i y 1 a t 2 PCI Express x4 3 PCI 32 bit 33 MHz m H 4 PCI Express 2 0 x16 5 PCI Express 2 0 x8 in x16 6 PCI Express 2 0 x8 X8DTi amp X8DTi F only PCI Card Retainer Bracket 60 mm Fan 1 of 3 1 CD DVD Storage Drive 1 of 8 Combo Drive Front Housing Figure 1 4 Major Components of the RES 22XR3 Con
98. rostatic Discharge 1 17 Input Current 1 16 Input Frequency 1 16 Input Leakage 16 Input Power 1 16 Input VA Rating 1 16 Input Voltage 6 Maximum Wet Bulb 5 Noise Level 17 Packaging and Shipping 19 Plug Type 16 Power Factor 1 16 Relative Humidity 5 Shock 2 17 Temperature 5 Weight 7 15 Index 4 storage drive 2 7 storage drives installation 2 77 removal 2 10 Storage Drive Installation 2 71 Super I O 1 14 SuperMicro X8DTi motherboard xix SuperMicro X8DTi F motherboard xix SuperMicro X8DTi LN4F motherboard xix SVGA connector 2 17 Switch module Remote B system LEDs 1 6 LANI and LAN2 7 NIC1 Gb Ethernet 7 NIC2 Gb Ethernet 7 Overheat 7 Power 1 7 Power Fail LED upper 1 7 SATA storage drives 1 7 System Power 16 T Technical Support 9 temperature xxiv TTYA COM1 A 2 Turning the System Off 2 17 Turning the System On 2 16 U UARTs 1 14 USB Ports A 2 USB Serial Ports 8 V VGA Connector Pin Signals A 3 VGA Port 1 8 W Warnings xxv Website Information xxiv Themis Computer X Xeon processors 1 2 1 9 Index 5 Themis Computer RES 22XR3 Installation Manual Configuration 2 Index 6 Themis Computer Place Stamp Here Themis Computer 47200 Bayside Parkway Fremont CA 94538 Attn Publications Department Fold here tape at top to seal lt a SINSHL Reader Comment Card We welcome your comments and suggestions to help
99. rotection 3 30 Change Supervisor Password 3 29 Change User Password 3 30 Clear User Password 3 30 Password Check 3 30 Supervisor Password 3 29 User Access Level 3 30 User Password 3 29 Index 1 Themis Computer RES 22XR3 Installation Manual Configuration 2 SEL PEF Configuration 3 27 Set LAN Configuration 3 25 Southbridge Configuration 3 12 Starting 3 1 Starting the Setup Utility 3 2 Subnet Mask Configuration 3 26 Super IO Device Configuration 3 8 System Health Monitor 3 20 System Overview 3 3 Trusted Computing 3 23 View BMC System Event Log 3 24 Boot Settings Screen 3 37 C Cautions xxv CD RW DVD ROM drive 1 2 Chipset 7 2 COM1 COM serial port header 1 6 Comments xxiv components major 4 Configuration 2 SuperMicro X8DTi motherboard xix SuperMicro X8DTi F motherboard xix SuperMicro X8DTi LN4F motherboard xix Configuration system 2 17 D Dimensions chassis 2 disk drive adapter functions super I O 1 14 DVI connector 2 17 E ECC SDRAM 1 2 memory modules 2 4 Electrical Specifications 6 Electrostatic Discharge 1 17 EMI xxiv Environmental Specifications 7 ESD grounding techniques 2 protected mat 2 7 Ethernet A 4 Index 2 Expansion slots 2 F Fan Removing and Installing a 60 mm Fan 2 2 flanges 2 15 FLASH Recovery Screen 3 38 form factor 2RU 2 front bezel 2 9 front doors 2 9 front panel 4 fused AC 1 16 G General Specifications 1 15 Gigabit Ethern
100. ructions given a screen will display to indicate that remote flashing is starting and the new BIOS file is being uploaded 7 To use Hyper Terminal to transfer the XModem protocol by using the Send File dialog under the Transfer menu follow the instructions below to com plete XModem transfers Themis Computer BIOS Setup Utility BIOS Recovery a Select the Transfer menu and enter lt Send gt see Figure 3 6 AMI FLSH HyperTerminal File Edit View Call EST Help Receive File Capture Text Send Text File Press lt Spa ke remote BIOS flash Regi n remo Capture to Printer d v n y Starting remote flash Upload new BIOS file using modem protocol KKK Figure 3 6 AMI FLSH Hyperterminal b Specify the location of the ROM file and select the proper protocol XMo dem c Press lt Send gt to start ROM File extraction See the picture below Send File Folder C Documents and Settings Desktop Filename C Documents and Settings Desktop 3C02 ROM Protocol ae Figure 3 7 ROM File Extraction Screen 3 37 Themis Computer RES 22XR3 Installation Manual Configuration 2 d Once the ROM file extraction is completed the message New BIOS re ceived OK will display Starting FLASH Recovery NVRAM data will be destroyed CMOS data will be preserved Ending FLASH Recovery FLASH Update completed successfully Rebooting
101. s lt Enter gt Discard Changes and Exit Select this option to quit the BIOS Setup without making any permanent changes to the system configuration and reboot the computer Select Discard Changes and Exit from the Exit menu and press lt Enter gt Discard Changes Select this option and press lt Enter gt to discard all the changes and return to the AMI BIOS Utility Program Load Optimal Defaults To set this feature select Load Optimal Defaults from the Exit menu and press lt Enter gt Then select OK to allow the AMI BIOS to automatically load Optimal Defaults to the BIOS Settings The Optimal settings are designed for maximum sys tem performance but may not work best for all computer applications Load Fail Safe Defaults To set this feature select Load Fail Safe Defaults from the Exit menu and press lt Enter gt The Fail Safe settings are designed for maximum system stability but not for maximum performance 3 33 Themis Computer RES 22XR3 Installation Manual Configuration 2 3 7 BIOS Recovery A Caution Do not upgrade the BIOS unless your system has a BIOS related issue Flashing the wrong BIOS can cause irreparable damage to the system In no event shall Supermicro be liable for direct indirect special incidental or consequential damages arising from a BIOS update If you need to update the BIOS do not shut down or reset the system while the BIOS is updating This is to avoid possible bo
102. s predefined by the CPU manufacturer to give the CPU and system fans additional time needed for CPU and system cooling In both the alarms above please take immediate action as shown below 3 3 12 2 CPU Temperature System Temperature This feature displays current temperature readings for the CPU and the System The following items will be displayed for your reference only CPU Temperature The CPU thermal technology that reports absolute temperatures Celsius Fahrenheit has been upgraded to a more advanced feature by Intel in its newer processors The Themis Computer BIOS Setup Utility J Advanced Setup Configurations basic concept is each CPU is embedded by unique temperature information that the motherboard can read This Temperature Threshold or Temperature Tolerance has been assigned at the factory and is the baseline on which the motherboard takes action during different CPU temperature conditions Oe by increasing CPU Fan speed triggering the Overheat Alarm etc Since CPUs can have different Temper ature Tolerances the installed CPU can now send information to the motherboard what its Temperature Tolerance is and not the other way around This results in better CPU thermal management Supermicro has leveraged this feature by assigning a temperature status to certain thermal conditions in the processor Low Medium and High This makes it easier for the user to understand the CPU s tempera
103. s set to Enabled the following items will display Serial Port Number This feature allows the user decide which serial port to be used for Console Redirec tion The options are COM 1 COM2 and Onboard IPMI default e Base Address IRQ This item displays the base address and IRQ of the serial port used for Console Redirection 3 3 11 2 Serial Port Mode This feature allows the user to set the serial port mode for Console Redirection The options are 115200 8 n 1 default 57600 8 n 1 38400 8 n 1 19200 8 n 1 and 9600 8 n 1 3 3 11 3 Flow Control This feature allows the user to set the ow control for Console Redirection The options are None default Hardware and Software 3 3 11 4 Redirection After BIOS POST Select Disabled to turn off Console Redirection after Power On Self Test POST Select Always to keep Console Redirection active all the time after POST Note This setting may not be supported by some operating systems Select Boot Loader to keep Console Redirection active during POST and Boot Loader The options are Disabled Boot Loader and Always default 3 3 11 5 Terminal Type This feature allows the user to select the target terminal type for Console Redirec tion The options are ANSI VT100 default and VT UTF8 3 3 11 6 VT UTF8 Combo Key Support A terminal keyboard definition that provides a way to send commands from a remote console Available options are Enabled default and Disabled
104. sferred per interrupt if Block Mode is not used Block Mode allows transfers of up to 64 KB per interrupt Select Disabled to allow data to be transferred from and to the device one sector at a time Select Auto to allow data transfer from and to the device occur multiple sectors at a time if the device supports it The options are Auto default and Disabled Themis Computer BIOS Setup Utility 3 3 8 6 3 3 8 7 Advanced Setup Configurations PIO Mode The IDE PIO Programmable I O Mode programs timing cycles between the IDE drive and the programmable IDE controller As the PIO mode increases the cycle time decreases The options are Auto default 0 1 2 3 and 4 Select Auto to allow the AMI BIOS to automatically detect the PIO mode Use this value if the IDE disk drive support cannot be determined Select 0 to allow the AMI BIOS to use PIO mode 0 It has a data transfer rate of 3 3 MBs Select 1 to allow the AMI BIOS to use PIO mode 1 It has a data transfer rate of 5 2 MBs Select 2 to allow the AMI BIOS to use PIO mode 2 It has a data transfer rate of 8 3 MBs Select 3 to allow the AMI BIOS to use PIO mode 3 It has a data transfer rate of 11 1 MBs Select 4 to allow the AMI BIOS to use PIO mode 4 It has a data transfer bandwidth of 32 Bits Select Enabled to enable 32 Bit data transfer DMA Mode Select Auto to allow the BIOS to automatically detect IDE DMA mode when the IDE disk drive support cannot be d
105. ssword is one of the most important steps during your installation Your root account is similar to the administrator account used on Windows NT machines The root account is used to install packages upgrade RPMs and perform most system maintenance Logging in as root gives you complete control over your system see Figure C 15 on page C 15 C 14 Themis Computer Red Hat Enterprise Linux 5 Installation Installation RED H T ENTERPRISE LINUX 5 The root account is used for administering the system Enter a password for the root user Root Password eeeers Confirm eeeeees Retease Notes Back SS Next Figure C 15 Setting Up Root Account and Password Click Next Step 16 Now that you have made most of the choices for your installation you are ready to confirm the default package selection or customize packages for your sys tem The Package Installation Defaults screen appears and details the default package set for your Red Hat Enterprise Linux installation This screen varies depending on the version of Red Hat Enterprise Linux you are installing see Figure C 16 on page C 16 To customize your package set further select the Customize now option on the screen Clicking Next takes you to the Package Group Selection screen You can select package groups which group components together according to function for example X Window System and Editors individual packages or a combination o
106. stem Overview The following BIOS information will be displayed System Time System Date Use this option to change the system time and date Highlight System Time or System Date using the arrow keys Enter new values through the keyboard and press lt Enter gt Press the lt Tab gt key to move between fields The date must be entered in Day MM DD YY format The time is entered in HH MM SS format Themis Computer RES 22XR3 Installation Manual Configuration 2 Note The time is in the 24 hour format For example 5 30 P M appears as 17 30 00 3 2 1 2 Supermicro X8DT3 BIOS Build Version This item displays the BIOS revision used in your system BIOS Build Date This item displays the date when this BIOS was completed AMI BIOS Core Version This item displays the revision number of the AMI BIOS Core upon which your BIOS was built 3 2 1 3 Processor The AMI BIOS will automatically display the status of the processor used in your system e CPU Type This item displays the type of CPU used in the motherboard e Speed This item displays the speed of the CPU detected by the BIOS e Physical Count This item displays the number of processors installed in your system as detected by the BIOS e Logical Count This item displays the number of CPU Cores installed in your system as detected by the BIOS e Micro code Revision This item displays the revision number of the BIOS Micro_code used in your system 3 2 1 4 System
107. stem sus pend button to make the system enter a SoftOff state The monitor will be suspended and the hard drive if used will spin down Pressing the power button again will cause the whole system to wake up During the SoftOff state the ATX power supply provides power to keep the reguired circuitry in the system alive In case the sys tem malfunctions and you want to turn off the power just press and hold the power button for 4 seconds This option can be set in the Power section of the BIOS Setup routine Wake On LAN WOL Wake On LAN is defined as the ability of a management application to remotely power up a computer that is powered off Remote PC setup up dates and asset track ing can occur after hours and on weekends so that daily LAN traffic is kept to a min imum and users are not interrupted The motherboard has a 3 pin header WOL to connect to the 3 pin header on a Network Interface Card NIC that has WOL capa bility In addition an onboard LAN controller can also support WOL without any connection to the WOL header The 3 pin WOL header is to be used with a LAN add on card only J Note Wake On LAN requires an ATX 2 01 or above compliant power supply Themis Computer Overview and Specifications Power Supply 1 7 Power Supply As with all computer products a stable power source is necessary for proper and reliable operation It is even more important for processors that have high CPU clock rates
108. systems such as Windows VFAT or NTFS partitions Remove Linux partitions on selected drives and create default layout select this option to remove only Linux partitions partitions created from a previous Linux installation This does not remove other partitions you may have on your hard drive s such as VFAT or FAT32 partitions Use free space on selected drives and create default layout select this option to retain your current data and partitions assuming you have enough free space avail able on your hard drive s Using your mouse choose the storage drive s on which you want Red Hat Enter prise Linux to be installed If you have two or more drives you can choose which drive s should contain this installation Unselected drives and any data on them are not touched Themis Computer C 7 RES 22XR3 Installation Manual Configuration 2 To review and make any necessary changes to the partitions created by automatic partitioning select the Review option After selecting Review and clicking Next to move forward the partitions created for you in Disk Druid appear You can make modifications to these partitions if they do not meet your needs see Figure C 8 Inctallation requires parlioring of your hard drive By default a partitioning layout is chosen which Is reasonable for most users You can either choose has eae Ber ap eee Aid aeii Remove all partitions on selected drives and create default layout Re
109. t gt gt X US international Ukrainian United Kingdom D Release notes anac Figure C 5 Selecting Layout Type Once you have made your selection click Next to continue Step 6 Enter the installation number if you don t have an installation number select the Skip Entering Installation Number Radio Button Click OK and if you did not enter an installation number you ll be given a warning Click Skip to continue see Figure C 6 on page C 6 Themis Computer RES 22XR3 Installation Manual Configuration 2 C 6 RED HAT ENTERPRISE LINUX 5 A Sesect the appropriate heybosrd for the system Sovan Spanish Seeasnh an Swiss French To instali the full set of supported packages included in your m tsenip on please enter your installation Nuenber Sales French lated Swiss German n Irmtallatson Number Swiss German latint Skp entenng instaitabon Number Dann irmoripi am Typeeriter X Cave Por Turkish Se U S international TATA United Kingdom 3geiente notes d Bach gt Next Figure C 6 Enter Installation Number Click Next to continue Step 7 Partitioning allows you to divide your hard drive into isolated sections where each section behaves as its own hard drive Partitioning is particularly useful if you run multiple operating systems On this screen you can choose to create the default layout or choose to manual parti tion using the Create cus
110. t has a data transfer rate of 133 MBs The options are Auto default SWDMAn MWDMAn and UDMAn S M A R T For storage drives Self Monitoring Analysis and Reporting Technology SMART can help predict impending drive failures Select Auto to allow the AMI BIOS to automatically detect storage drive support Select Disabled to prevent the AMI BIOS from using the S M A R T Select Enabled to allow the AMI BIOS to use the S M A R T to sup port hard drive disk The options are Disabled Enabled and Auto default 32 Bit Data Transfer Select Enable to enable the function of 32 bit IDE data transfer The options are Enabled default and Disabled 3 3 8 10 Hot Plug Select Enable to enable the hot plug function for the SATA devices The options are Enabled default and Disabled 3 3 8 11 IDE Detect Timeout sec Use this feature to set the time out value for the BIOS to detect the ATA ATAPI devices installed in the system The options are 0 sec 5 10 15 20 25 30 and 35 default Themis Computer BIOS Setup Utility 3 3 9 3 3 9 1 3 3 9 2 3 3 9 3 3 3 9 4 3 3 9 5 3 3 9 6 Advanced Setup Configurations PCI PnP Configuration Clear NVRAM This feature clears the NVRAM during system boot The options are No default and Yes Plug amp Play OS Selecting Yes allows the OS to configure Plug amp Play devices This is not required for system boot if your system has an OS that supports Plug a
111. t not be opened If the enclosure of such a drive is opened invisible laser radiation is emitted Do not allow yourself to be exposed to this radiation The laser system meets the code of Federal Regulations 21 CFR 1040 for the USA and Canadian Radiation Emitting Devices Act REDR C 1370 Electrostatic Discharge ESD A sudden discharge of electrostatic electricity can destroy static sensitive devices or micro circuitry Proper packaging and grounding techniques are necessary pre cautions to prevent damage Always take the following precautions 1 Transport boards in static safe containers such as boxes or bags 2 Keep electrostatic sensitive parts in their containers until they arrive at static free stations 3 Always be properly grounded when touching a sensitive board component or assembly 4 Store electrostatic sensitive boards in protective packaging or on conductive foam Grounding Methods Guard against electrostatic damage at workstations by following these steps 1 Cover workstations with approved anti static material Provide a wrist strap connected to a work surface and properly grounded tools and equipment Themis Computer RES 22XR3 Installation Manual Configuration 2 2 Use anti static mats heel straps or air ionizers to give added protection 3 Handle electrostatic sensitive components boards and assemblies by the case or the PCB edge 4 Avoid contact with pins leads or circuitry
112. te T Ekke S I a e FT TITUS TTTTT TTT TTT TTTTTTI t Iw 4 i il Ma d d Figure 4 Front View of a Front I O RES 22 Chassis Figure 5 Rear View of a Front I O RES 22 Chassis xxiii Themis Computer RES 22XR3 Installation Manual Configuration 2 xxiv The 2RU high 3 5 RES 22XR3 Configuration 2 has been designed to fit into a standard 19 rack and is provided with rack mount brackets with handles Optional rack mount slides are also available The RES 22XR3 is rugged enough to withstand extreme shock up to 35G temperature and EMI as that associated with such demanding markets as the military aerospace and telecommunications industries Intel processors supported by RES 22XR3 Configuration 2 include either Two Intel 5500 Series Xeon Quad Core CPUs or Two Intel 5600 Series Xeon Quad to Six Core CPUs which operate at a QPI QuickPath Interconnect up to 6 4 GT s and support a total memory capacity of 192 GigaBytes 12 16 GB DIMMs using 1066 MHz DDR3 ECC Registered memory modules Changing memory speeds 1333 MHz and 800 MHz is supported by lower capacity DIMMs hence lower total memory capacity RES 22XR3 Configuration 2 is based on the functionality and capability of the fol lowing Intel chipset e Intel 5520 Tylersburg chipset e ICHIOR IOH 36D An overview of RES 22XR3 design and specifications is given in Chapter 1 Over view and Specifications of this manual This manual is
113. ters The approximate weight of a manual and associated shipping paperwork is one pound 0 5 kg Therefore both the shipping container and a fully installed RES 22XR3 including power cords manual and associated paperwork weigh under 35 pounds 16 kg A Caution Do not discard the original packaging that your system was shipped in The original packaging was designed specifically to withstand the stress and rigors of today s shipping environment It will be needed in the event the system must be shipped back to Themis Computer See Appendix E Re Packing Instructions 1 10 1 Accessory Kit Each RES 22XR3 Configuration 2 is packaged with an Accessory Kit consisting of the following items A A Power cord Retainer Bracket B Two AC Power Cords C Two Storage Drive Barrel Keys When you unpack the RES 22XR3 Configuration 2 please verify that all of these items are included If any of these items are missing or not as pictured please call Themis Technical Support at 510 252 0870 or send an email to support the mis com To learn how to secure the AC power cords and the power cord retainer bracket refer to Section 2 3 1 Plugging in the AC Power Cords on page 2 16 1 19 Themis Computer RES 22XR3 Installation Manual Configuration 2 1 20 1 10 2 Rack Mount Slides Optional Rack Mount Slides can be mounted on each side of the RES 22XR3 Conf
114. the basic navigation of the AMI BIOS Setup Utility setup screens Starting BIOS Setup Utility To enter the AMI BIOS Setup Utility screens press the lt Delete gt key while the sys tem is booting up Note In most cases the lt Delete gt key is used to invoke the AMI BIOS setup screen There are a few cases when other keys are used such as lt F1 gt lt F2 gt etc Each main BIOS menu option is described in this manual The Main BIOS setup menu screen has two main frames The left frame displays all the options that can be configured Grayed out options cannot be configured Options in blue can be config ured by the user The right frame displays the key legend Above the key legend is an area reserved for a text message When an option is selected in the left frame it is highlighted in white Often a text message will accompany it 2 1 Themis Computer RES 22XR3 Installation Manual Configuration 2 Note The AMI BIOS has default text messages built in Supermicro retains the option to include omit or change any of these text messages The AMI BIOS Setup Utility uses a key based navigation system called hot keys Most of the AMI BIOS setup utility hot keys can be used at any time during the setup navigation process These keys include lt F1 gt lt F10 gt lt Enter gt lt ESC gt arrow keys etc J Note Options printed in Bold are default settings 3 1 2 How To Change the Configuration Data
115. ti Sector Transfer mmmeerss 3 14 3 38 60 PIO Mod Eeer 3 15 3 3 8 7 DMA Mode ssissccscessivcsetsassatateanciselenvaeteass igat avalause ash 3 15 3 3 8 8 SMART For storage drives seenreeonaneoenaneosnaveo nae 3 16 33 89 32 Bit Data Transfer ee 3 16 EEN LA Hot dE 3 16 3 2051 IDE Detect nen SSE arstilt akud aema henrik ava 3 16 3 3 9 RECHERCHER 3 17 33 91 Cleat NVRAM atakse 3 17 3392 Plus amp Play NEE 3 17 e PCL Eateney KEE 3 17 e E DE BRITTEN 3 17 3 3 9 5 Slot 1 Option ROM Slot 6 Option ROM eee eeeceeeteeeeeee 3 17 3 3 9 6 LANI PXE LAN2 PXE LAN3 PXE LAN4 PXE LN3 PXE LN4 PXE for LN4 models only 3 17 3 3 10 Super IO Device Configuration 4 csscassesescvaveasasesdqucsseosteccdarsebedeeaonedetevdene 3 18 Themis Computer Table of Contents 3 3 10 1 Onboard Floppy Controller ccc eeeceeesecessseceesteeeeseeeeeneeeenes 3 18 3 3 10 2 Floppy A Floppy B 23545455 sevakaceaieedtes putes Eden ee el 3 18 3 3 10 3 Serial Port Address Serial Port Address 3 18 3 3 10 4 Watch Dog Timer ssc csscedescccdissasassacivisdeccdavandecctasnnca es leseaantsuseee 3 18 3 3 11 Remote Access Configuration EE 3 18 Se AR a IN EE 3 18 3 3 11 2 Serial Port Mode seii9giusereiaeterer eedie Ee hate kak tuhande t 3 19 3 2 11 3 Flow Control kreisi inns le koa khk eiia 3 19 3 31 1 4 Redirection After BIOS POST sii ieocccsices eos k ised ke ida i
116. tion or maintenance of the equipment are given in the section entitled Safety Instructions on page iv WARNINGS and CAUTIONS The definitions of WARNINGS and CAUTIONS as used in this document are given in the Preface in the section entitled Notes Cautions Warnings and Sidebars Themis Customer Support North America South America and Pacific Rim Telephone 510 252 0870 Fax 510 490 5529 E mail support themis com Web Site http www themis com RES 22XR3 Installation Manual Configuration 2 Version 1 0 July 2010 Part Number 117017 024 Themis Computer Version Revision History Ke LO EE July 2010 iii Themis Computer RES 22XR3 Installation Manual Configuration 2 Safety Instructions To maximize user safety and ensure correct device operation all instructions con tained in this section should be read carefully Caution Itis important that the user observe all warnings and instructions that are on the device and contained in this manual e The device must be used in accordance with the instructions for use e Electrical installations in the room must correspond to the requirements of respective regulations e Take care that there are no cables particularly mains cables in areas where persons can trip over them e Do not use a mains connection in sockets shared by a number of other power consumers Do not use an extension cable e Only use the mains cable supplied
117. tom layout option of Disk Druid The first three options allow you to perform an automated installation without hav ing to partition your drive s yourself If you do not feel comfortable with partition ing your system it is recommended that you do not choose to create a custom layout and instead let the installation program partition for you You can configure an SCSI target for installation or disable a dmraid device from this screen by clicking on the Advanced storage configuration button see Figure C 7 on page C 7 Themis Computer Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 installation requires partitioning of your hard drive By detault a partitioning tayout is chosen which is reasonable for most users You can either choose to use this or create your own Remove linux partitions on selected drives and create default layout Setect the drive s to use for this installation Advanced storage configuration i Review and modify partitioning layout _ Betease Notes Back Next Figure C 7 Partitioning Click Next to continue Step 8 Create default layout allows you to have some control concerning what data is removed if any from your system Your options are e Remove all partitions on selected drives and create default layout select this option to remove all partitions on your hard drive s this includes partitions cre ated by other operating
118. ture status rather than by just simply seeing a temperature reading 1 e 250C The CPU Temperature feature will display the CPU temperature status as detected by the BIOS e Low This level is considered as the normal operating state The CPU tem perature is well below the CPU Temperature Tolerance The motherboard fans and CPU will run normally as configured in the BIOS Fan Speed Con trol User intervention No action required Medium The processor is running warmer This is a precautionary level and generally means that there may be factors contributing to this condition but the CPU is still within its normal operating state and below the CPU Tem perature Tolerance The motherboard fans and CPU will run normally as con figured in the BIOS The fans may adjust to a faster speed depending on the Fan Speed Control settings User intervention No action is required However consider checking the CPU fans and the chassis ventilation for blockage High The processor is running hot This is a caution level since the CPU s Temperature Tolerance has been reached or has been exceeded and may activate an overheat alarm User intervention If the system buzzer and Over heat LED has activated take action immediately by checking the system fans chassis ventilation and room temperature to correct any problems Note 1 The system may shut down if it continues for a long period to prevent damage t
119. unt Slide Installation Caution Any screws used to mount a slide to a RES 22XR3 chassis must not ex ceed a length of 3 8 to prevent excessive penetration of the chassis Themis Computer RES 22XR3 Installation Manual Configuration 2 2 3 Operation 2 3 1 Plugging in the AC Power Cords Before powering on the RES 22XR3 plug in the AC power cords as follows 1 On the rear of the RES 22XR3 plug an AC power cord shipped with unit into the AC power socket on each power supply see Figure 2 15 AC Power Socket Figure 2 15 AC Power Socket and LED on the RES 22XR3 Rear 2 3 2 Turning the System On 1 Plug the AC power cord from each of the RES 22XR3 Configuration 2 power supplies into a live AC outlet The LED on each power supply will turn on when AC power is enabled 2 On the front of the RES 22XR3 push the system power on off button see Figure 2 16 This will cause the system POWER LED to light green Power LED System Power On Off Button RESA RES 22XR3 Figure 2 16 System Power Button and LED on the RES 22XR3 Front 2 16 Themis Computer Installation and Operation Operation 2 3 3 Getting Started 2 3 3 1 Configuration 1 Make sure all storage drives are installed see SATA II Storage Drive on page 2 9 Drive ID numbers are shown in Figure 1 3 on page 1 4 Chapter 1 Changes may be made through the BIOS 2 Make sure that a graphi
120. uration 2 chassis contains six threaded screw holes on each side to accommo date 8 32 size screws included with the rack mount slide kit steel slides require four mounting holes and aluminum slides require three mounting holes see Figure B 1 Mounting Bracket 202 4 424 9 24 9 Legena Screw Hole Size 48 32 Figure B 1 Screw Locations for Rack Mount Slides Dimensions of the screw hole patterns on the sides of the RES 22XR3 Configura tion 2 chassis for installing rack mount slides are shown in Figure B 1 B 1 Themis Computer RES 22XR3 Installation Manual Configuration 2 Caution Any screws used to mount a slide to a RES 22 chassis must not exceed a length of 3 8 to prevent excessive penetration of the chassis The rack mount slide installation kit includes the following items a Two inside slide sections b Two outside slide sections c Two front short slide brackets d Two rear long slide brackets e Assorted screws washers and nuts Follow these steps to install a steel rack mount slide to the RES 22XR3 Configura tion 2 chassis 1 B 2 Attach the inside slide section see Figure B 2 on page B 3 to both sides of the RES 22XR3 Configuration 2 chassis using four 8 32 screws per side Measure the depth of the 19 equipment rack into which the RES 22XR3 Configuration 2 system will be installed this can vary from 24 to 30 Using the depth of the equipm
121. vel Available when Supervisor Password is set as above Use this feature to set the user s access level The options are e Full Access default grants full User read and write access to the Setup Util ity e View Only allows access to the Setup Utility but cannot change the fields e Limited allows only limited fields to be changed such as Date and Time e No Access prevents User access to the Setup Utility Change User Password Select this feature and press lt Enter gt to access the submenu and then enter a new User Password Clear User Password Available only if User Pass word has been set This item allows you to clear a user password after it has been entered Password Check This item allows you to check a password after it has been entered The options are Setup default and Always Boot Sector Virus Protection When Enabled the AMI BIOS displays a warning when any program or virus issues a Disk Format command or attempts to write to the boot sector of the storage drive The options are Enabled and Disabled default Themis Computer BIOS Setup Utility Boot Configuration 3 9 Boot Configuration Use this feature to configure boot settings see Figure 3 4 gt Boot bevice Priority Figure 3 4 Boot Settings 3 9 1 Boot Device Priority This feature allows the user to specify the sequence of priority for the Boot Device The settings are 1st boot device 2nd boot device 3rd b
122. view DDR3 1333 1066 800 MHz ECC DDR3 1333 1066 800 MHz ECC E ee E E al fa e Up to 48 GB total DDR3 SDRAM per CPU 4 Six 240 pin DIMM Sockets Optional PCI F X16 e Up to 48 GB total DDR3 SDRAM per CPU Six 240 pin DIMM Sockets Ports 7 10 Port 7 Ports 1 2 INTEL 5520 P gt Ports 3 4 Ports 5 6 Ports 0 Port 8 P gt zi PCI E X4 2 foe x DMI E 6 5 E E wW 2 5 E GE g S 5 2 INTEL ICH10R PCI E X4 fi gt LANE 1 2 3 4 2 LANE 5 LANE 6 3 LPC Figure 1 2 X8DTi Motherboard Block Diagram 1 3 Themis Computer RES 22XR3 Installation Manual Configuration 2 e ON OFF Switch Front View Ge tas i I a a y i E 3 5 2RU t i i DU Storage Drive SATA II 8 Total Front LED Indicator Panel see Figure 1 5 page 1 6 a 17 07 42 7 cm 19 with Rack Mounts 20 50 Ja PCI Slot 32 bit 33 MHz 50 8 cm deep PCI E 4 Dual Power Supplies SEBs MHz j Empty a PS1 PS2 Rear View OI OH Power Supply Latch Lock AC Power Socket 3 prong NEMA 15 D CD RW DVD ROM Combo Slimline Drive System Power 1 4 H LJ Sp CR LEI Sg ra i i w s es e S _ 20 Bocce zs ss Rear I O Panel PCI Express 2 0 x16 slot Slot 7 see Figure 1 5 page 1 6 PCI Express x8 slot in a x16 slot PCI Express 2 0 x8 slot Figu
123. wapped while the sys tem is still on and operational 2 1 7 1 Removing a Power Supply Perform the following steps to remove a power supply 1 Remove the two captive Phillips screws holding the power supply locking bracket to the chassis see A Figure 2 12 Store the bracket for later use Knurled Captive Phillips a oe Li Knurled Captive Phillips Screw 7 gt Power Supply Locking Bracket A Remove power supply locking bracket B then disengage locking lever and remove power supply AC Outlet Phillips Screw Hole Push right to release power supply Power LED for Power Supply Locking Bracket P Power Supply _ a m If rr 2 K d i Locking Lever e Phillips Screw Hole for knurled captive screw on Power Supply Locking Bracket Extraction Handle Figure 2 12 Remove the RES 22XR3 Power Supply Locking Bracket 2 13 Themis Computer RES 22XR3 Installation Manual Configuration 2 2 Putthe right index finger on the power supply extraction handle and the right thumb on the left side of the power supply locking lever 3 Sgueeze the locking lever toward the extraction handle and firmly pull the power supply from the chassis Caution When pulling the power supply from the chassis hold it at the bot tom to prevent it from falling and damaging the unit 2 1 7 2 Installing a Power Supply Perform the following steps to install a power supply 1 Insert the replacement power supp
124. wer On for the system power to be turned on after a power loss e Select Last State to allow the system to resume its last state before a power loss The options are Power On Power Off and Last State default Watch Dog Timer If enabled the Watch Dog Timer will allow the system to reboot when it is inactive for more than 5 minutes The options are Enabled and Disabled default Processor and Clock Options This submenu allows the user to configure the Processor and Clock settings C1E Support Select Enabled to use the feature of Enhanced Halt State C1E significantly reduces the CPU s power consumption by reducing the CPU s clock cycle and voltage during a Halt State The options are Disabled and Enabled default Hardware Prefetcher Available when supported by the CPU If set to Enabled the hardware pre fetcher will pre fetch streams of data and instruc tions from the main memory to the L2 cache in the forward or backward manner to improve CPU performance The options are Disabled and Enabled default Adjacent Cache Line Prefetch Available when supported by the CPU The CPU fetches the cache line for 64 bytes if this option is set to Disabled The CPU fetches both cache lines for 128 bytes as comprised if Enabled default Intel Virtualization Technology Available when supported by the CPU Select Enabled to use the feature of Virtualization Technology to allow one platform to run multiple operating systems

Download Pdf Manuals

Related Search

Related Contents

Hoover SH20030 Use and Care Manual  R,9DIME 200E series 5~ winchester disk drive user manual  Nuts Grinder - 株式会社エフ・エム・アイ  Manual de Utilização Plugin  Franklin KJB-640 User's Manual  DM1424 Hematocrit-Centrifuge Manual  Untitled - Lidl Service Website  

Copyright © All rights reserved. Failed to retrieve file