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RES-32XR3 Installation Manual - Configuration 3

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1. 40 72 Vdc D 18 36 Vdc internally fused internally fused internally fused Input VA Rating e 425 VA NA NA BTU Rating e 1447 BTU hour e 1447 BTU hour e 1447 BTU hour Power Factor e 0 99 NA NA Input Leakage Current e 3 5 mA NA NA e Y Type e Y Type SVS5 4 or equivalent SVS5 4 or equivalent a Does not include plug in PCI cards b NA Not Applicable 1 8 2 1 1 8 2 2 System Power The RES 32XR3 operates with two N 1 redundant AC power supplies of 750 watts capacity each that auto range single phase AC input from 100 to 265 VAC 47 to 63 Hertz sources Filtered and fused internal AC is supplied to each power supply from a rear mounted power connection Two optional N 1 redundant DC power supplies of 750 watts 48 volts or 500 watts 28 volts each may be substituted for the AC power supplies see Table 1 7 These supplies should be specified at the time of your order Note Some AC RES systems may be installed with 650 watt instead of 750 watt power supplies which should not effect the performance of the system Output Voltage The RES 32XR3 power supply provides output voltages that are split between 3 3V 5V 5V sb 12V and 12V rails Themis Computer 1 Overview and Specifications 1 8 3 1 8 3 1 1 8 3 2 1 8 3 3 Front Sound Baffle Specifications Environmental Shock The RES 32XR3 Configuration 3 is designed to survive an elevated shock environ ment All structu
2. The motherboard fans and CPU will run normally as configured in the BIOS Fan Speed Con trol User intervention No action required e Medium The processor is running warmer This is a precautionary level 3 21 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 J and generally means that there may be factors contributing to this condition but the CPU is still within its normal operating state and below the CPU Tem perature Tolerance The motherboard fans and CPU will run normally as con figured in the BIOS The fans may adjust to a faster speed depending on the Fan Speed Control settings User intervention No action is required However consider checking the fans and the chassis ventilation for blockage High The processor is running hot This is a caution level since the CPU s Temperature Tolerance has been reached or has been exceeded and may activate an overheat alarm User intervention If the system buzzer and Over heat LED has activated take action immediately by checking the system fans chassis ventilation and room temperature to correct any problems Note 1 The system may shut down if it continues for a long period to prevent damage to the CPU 2 The information provided above is for your reference only For more information on thermal management please refer to Intel s Web site atwww Intel com 3 3 11 3 System Temperature The system tempe
3. RES 32XR3 Installation Manual Configuration 3 Version 1 2 B 4 Themis Computer Appendix Red Hat Enterprise Linux 5 Installation C 1 Introduction Welcome to the Red Hat Enterprise Linux Installation Guide This guide contains useful information to assist you during the installation of Red Hat Enterprise Linux via DVD device From fundamental concepts such as installation preparation to the step by step installation procedure C 2 Installation Step 1 Insert the Redhat Enterprise Linux 5 DVD and Power on the system you will see the first installation screen with a boot prompt press ENTER to begin installation see Figure C 1 on page C 2 C 1 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 RED HAT ENTERPRISE LINUX 5 To install or upgrade in graphical mode press the To install or upgrade in text mode type Use the function keys listed below for more information Fi Main F2 Options F3 General1 F4 Kernel FS5 Rescuel Figure C 1 Power On after Linux DVD is Inserted into Drive Step 2 Press the tab key to move focus to the Skip key then press Enter key to Continue see Figure C 2 on page C 2 Bed Hat Enterprise To begin testing the CD media before installation press OK Choose Skip to skip the media test and start the Installation Figure C 2 Skip Key Themis Computer C Red Hat Enterprise Linux 5
4. default and 4 Second Override Themis Computer 3 BIOS Setup Utility 3 3 2 2 3 3 2 3 3 3 3 3 3 3 1 3 3 3 2 3 3 3 3 Advanced Setup Configurations Restore on AC Power Loss Use this feature to set the power state after a power outage Select Power Off for the system power to remain off after a power loss Select Power On for the system power to be turned on after a power loss Select Last State to allow the system to resume its last state before a power loss The options are Power On Power Off and Last State default Watch Dog Timer If enabled the Watch Dog Timer will allow the system to reboot when it is inactive for more than 5 minutes The options are Enabled and Disabled default Processor and Clock Options This submenu allows the user to configure the Processor and Clock settings Ratio CMOS Setting This option allows the user to set the ratio between the CPU Core Clock and the FSB Frequency The default setting is the maximum ratio allowed for the type of CPU installed in the system Note If an invalid ratio is entered the AMI BIOS will restore the setting to the previous state The Ratio CMOS settings differ depending on the type of CPU in stalled in the system C1E Support Select Enabled to use the feature of Enhanced Halt State C1E significantly reduces the CPU s power consumption by reducing the CPU s clock cycle and voltage during a Halt State The options are Disabled a
5. 3 3 5 4 3 3 5 5 3 3 5 6 Intel OAT The Intel OAT I O Acceleration Technology significantly reduces CPU overhead by leveraging CPU architectural usage freeing the system resource for other tasks The options are Disabled and Enabled default Note A TOE device is a specialized dedicated processor that is installed on an add on card or a network card to handle some or all packet processing of this add on card DCA Direct Cache Access Select Enabled to use Intel s DCA Direct Cache Access Technology to improve data transfer efficiency The options are Enabled and Disabled default DCA Prefetch Delay A DCA Prefetch is used with TOE components to prefetch data on order to shorten execution cycles and maximize data processing efficiency Prefetching too fre quently can saturate the cache directory and delay necessary cache accesses This feature reduces or increases the frequency in which the system prefetches data The options are 8 16 24 32 default 40 48 56 64 72 80 88 96 104 112 and 120 IOH PCI E Max Payload Size Some add on cards perform faster with the coalesce feature which limits the pay load size to 128B while others with a payload size of 256B which inhibits the coalesce feature Please refer to your add on card user guide for the desired setting The options are 256B default and 128B Intel VT d Select Enabled to enable Intel s Virtualization Technolog
6. Drives The settings are 1st boot device 2nd boot device and Disabled e Ist Drive 1st Floppy Drive e 2nd Drive USB XXXXXXXXX CD DVD Drives This feature allows the user to specify the boot sequence from available CD DVD Drives i e Ist Drive 2nd Drive etc USB Drives Use this feature to specify the boot sequence from the available USB Drives Ist Drive 2nd Drive Network Drives Use this feature to specify the boot sequence from available Network Drives lst Drive 2nd Drive Themis Computer 3 BIOS Setup Utility 3 6 Exit Options Select the Exit tab from the AMI BIOS Setup Utility screen to enter the Exit BIOS Setup screen Save Changes and Exit Figure 3 5 Exit Options 3 6 1 Save Changes and Exit When you have completed the system configuration changes select this option to leave the BIOS Setup Utility and reboot the computer so the new system configura tion parameters can take effect Select Save Changes and Exit from the Exit menu and press lt Enter gt 3 6 2 Discard Changes and Exit Select this option to quit the BIOS Setup without making any permanent changes to the system configuration and reboot the computer Select Discard Changes and Exit from the Exit menu and press lt Enter gt 3 33 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 6 3 3 6 4 3 6 5 Discard Changes Select this option and press lt Enter gt to d
7. Power e Indicates that the system is turned on Storage Drive e Indicates SAS SATA II storage drive activity ENET1 NIC 12 Gb Ethernet e Indicates network activity on LAN 1 Lee o gt eyes NIC2 Gb Ethernet e Indicates network activity on LAN 2 qe aS Overheat Fan Fail Normally OFF RED light when tem perature limits are ex ceeded e Warns that the system is exceeding specified temperature parameters The CPU overheat warning function must be enabled in the BIOS thus allowing the user to define an overheat temperature which when exceeded trig gers the overheat warning LED Symbol Rear Panel LED s Description Each Ethernet port contains two LEDs e The color of the left LED when facing the port indicates the LAN connection speed NA LAN1 and LAN2 Off 10 MHz BANS anal bane Green 100 MHz Amber 1 GHz e The right LED when lit indicates LAN activity a NIC Network Interface Controller b LANS and LAN4 supported by the X8DT3 LN4F motherboard Themis Computer 1 Overview and Specifications System LEDs and I O Connectors Table 1 5 O Connectors Connector Description PS 2 Mouse e 6 pin mini DIN female connector to attach a PS 2 mouse device PS 2 Keyboard e 6 pin mini DIN female connector to attach a PS 2 keyboard device e Two 4 pin USB connectors to attach serial devices to USB Port 0 and USB 0 and USB 1 USB
8. This setting allows you to select the USB 2 0 Controller mode The options are Hi Speed 480 Mbps default and Full Speed 12 Mbps BIOS EHCI Hand Off Select Enabled to enable BIOS Enhanced Host Controller Interface support to pro vide a workaround solution for an operating system that does not have EHCI Hand Off support When enabled the EHCI Interface will be changed from the BIOS con trolled to the OS controlled The options are Disabled and Enabled default Reserved Page Rout Select PCI to use PCI communication mode for the USB connections Select LPC to use LPC mode for the USB connections The options are PCI default and LPC 3 13 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 7 3 3 7 1 IDE SATA Configuration When this submenu is selected the AMI BIOS automatically detects the presence of the IDE devices and displays the following items SATA 1 Configuration If Compatible is selected it sets SATA 1 to legacy compatibility mode while select ing Enhanced sets SATA 1 to native SATA mode The options are Disabled Com patible and Enhanced default Configure SATA 1 as This feature allows the user to select the drive type for SATA 1 Select RAID Intel to enable Intel s SATA RAID firmware to configure Intel s SATA RAID settings Select RAID Adaptec to enable Adaptec s SATA RAID firmware to configure Adaptec s SATA RAID settings Select AHCI to enable SATA Ad
9. red LED kis supply has failed or has ote system is powered on lost AC input le e System is powered on and G power supply modules are Power Fail LED functioning normally or Off Left amp Right Power supply system has been shut And Note system is powered on down and there has been Oi no interruption to the AC D power e Ci e AC power has been inter RK Power Fail LED rupted to both power sup On Left or Right Power Supply ply modules When power Or red LED Kiss dead d off is restored but system is 91e SYSIEM IS POWEIEU O still off one of the two indi Ci e cator lights will be lit Z h Green LED e System is receiving DC Rear Power Supply Modules green LED adjacent to AC input Note system is powered on power 3 3V 5V 12V from the power supply module Off Green LED adjacent to AC input Note system is powered off e System is off and not re ceiving DC power from the Power Supply module a This LED behavior indicates only that AC power has interrupted to both power supplies and does not indicate which power supply module lost power first or regained power first b This LED behavior indicates that DC power is not being used and the system is off It does not indicate a loss of AC power to the power supply module Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 8 Table 1 4 System LEDs LED Description
10. voltage monitor Fan Status Monitor with Firmware Control The PC health monitor can check the RPM status of the cooling fans The onboard chassis fans are controlled by Thermal Management in the BIOS under Hardware Monitoring in the Advanced section Environmental Temperature Control The thermal control sensor monitors the CPU temperature in real time and will turn on the thermal control fan whenever the CPU temperature exceeds a user defined threshold The overheat circuitry runs independently from the CPU Once it detects that the CPU temperature is too high it will automatically turn on the thermal fan control to prevent any overheat damage to the CPU The onboard chassis thermal Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 circuitry can monitor the overall system temperature and alert users when the chassis temperature is too high L Caution To avoid possible system overheating please be sure to provide adequate airflow to your system System Resource Alert This feature is available when used with Supero Doctor II in the Windows OS envi ronment or used with the Supero Doctor II in Linux Supero Doctor is used to notify the user of certain system events For example you can also configure Supero Doc tor to provide you with warnings when the system temperature CPU temperatures voltages and fan speeds go beyond a pre defined range 1 6 1 6 1 ACPI Features ACPI s
11. 1 118188 024 117423 024 X8STi LN4 X8STi 3F Naming Key X8uvwxyz e System RES x2XR3S and RES x1XR3 where x 3 2 or 1 u D Double CPU sockets S Single CPU socket v A Sound chip no graphics chip T Graphics chip no sound chip w Not applicable x i SATA only 3 SAS 1 0 6 SAS 2 0 y LN4 Extra gigabit Ethernet controller for two extra ports z F IPMI blank No IPMI a The 17 deep RES XR3 chassis actually measures 17 07 deep but for simplicity will continue to be referred to as being 17 deep through out these manuals xxi Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 xxii A matrix describing RES chassis that are configured for front I O connector and front PCI card access in a 16 chassis is given in Table 3 This chassis design makes it more convenient to install cables to the system and demands no access to the rear of the chassis except to replace a fan Figure 2 shows the front view of a standard rear I O RES 32 chassis Figure 3 on page xxiii shows the rear view Figure 4 shows the front view of a front I O RES 32 chassis Figure 5 shows the rear view Table 3 Front I O 16 Deep Chassis Manual Matrix AC and DC Power Supplies CPU Mother Soc RES 32XR3 FIO Manual P N RES 22XR3 FIO Manual P N board kets X8DAHs F 2 117611 024 X8DTU F 2 117664 024 X 3 2 0t1 u D S v A i 3 6 z
12. 1 Slow Blinking LED for Suspend State Indicator mtmne 1 12 1 6 2 Main Switch Override Mechanisme 1 13 1 6 3 Wake On LAN WOL eegene en Eege 1 13 1 7 Super VO Controller 1044 pia kit v staakvulkaladavasmadan leinavad salu kadakad asualal luuda 1 14 18 EE 1 15 WEE COTE EE 1 15 152 ELS Ody aries eastside ae Saas GS lesa GEN he icra RN 1 16 1 82 11 System POW Cl sammas liedukas 1 16 IER et e EE 1 16 1 8 37 EAL OMAGA eege eene eeh 1 17 Med gt 118 0 JINI SN TT ST A dina EAA 1 17 1 8 3 2 Electrostatic Discharges EE 1 17 158 3 3 e e 1 17 1 9 Packaging and te 1 19 Ee i dE 1 19 Themis Computer vii RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 9 2 Rack M nt Slides Optional c sj csssssccededesceed ate cocedtsassendeassyccaesanses k e 1 20 2 Installation and Operation 15 vtl kvaale mavens 2 1 2b Installation Procedures enee 2 1 2 1 1 Remove Protective Top Covet viisis jcaiiassaccesatedosccassssacdeaveavaatasoesaceaanaveeeateces 2 1 2 1 2 Memory Melen ea 2 3 GE E e E et 2 4 E PC AUS ancien ts iti tu Sulit cadets daca vald aiandid 2 7 ZA Sell Ans talline e EE 2 7 GN ABARAT ALLER EE 2 8 2 1 4 1 Removing the Lithium Battery oo eeeeeeeeeneecneeeteeneees 2 8 2 1 4 2 Installing a Lithium Battery AAA 2 9 2 1 5 SAS SATA II Storage Drive austatud laud 2 9 2 1 5 1 Opening the RES 32XR3 Front Doors sseescseeeeeesrrerrrereeresee 2 10 2 1 5 2 Storage
13. 5600 Series Xeon Quad Six Core CPUs which operate at a QPI QuickPath Interconnect up to 6 4 GT s and support a total memory capacity of 192 GigaBytes 12 16 GB DIMMs using 1066 MHz DDR3 ECC Registered memory modules Changing memory speeds 1333 MHz and 800 MHz is supported by lower capacity DIMMs hence lower total memory capacity RES 32XR3 Configuration 3 is based on the functionality and capability of the fol lowing Intel chipset e Intel 5520 Tylersburg chipset e ICHIOR IOH 36D An overview of RES 32XR3 Configuration 3 design and specifications is given in Chapter 1 Overview and Specifications of this manual This manual is intended for an experienced system administrator with a knowledge of both networking and high speed server systems Website Information Themis Computer corporate and product information may be accessed on the World Wide Web by browsing the website http www themis com Your Comments are Welcome We are interested in improving our documentation and welcome your comments and suggestions You can email your comments to us at docfeedback Othemis com Please include the document part number in the subject line of your email Themis Computer Preface Notes Cautions Warnings and Sidebars The following icons and formatted text are included in this document for the reasons described Note A note provides additional information concerning the procedure or action being describ
14. 7 3 Boot Sector Recovery from an IDE CD ROM This process is almost identical to the process of Boot Sector Recovery from a USB device except that the BIOS image file is loaded from a CD ROM Use a CD R or CD RW drive to burn a CD with the BIOS image file in it and name the file SUPER ROM for the recovery process to load the file 3 7 4 Boot Sector Recovery from a Serial Port Serial Flash This process also known as Serial Flash allows the user to use a serial port to load a BIOS image for Boot Sector recovery This feature is usually used for embedded systems that rely on a serial port for remote access and debugging Reguirements In order to use Serial Flash for Boot Sector Recovery you will need to meet the fol lowing requirements The Target system the system that needs BIOS updates must have a serial port and Serial Flash support embedded in the BIOS image file e The Host system should also have a serial port and a terminal program that supports XModem Transfer protocol Hyper Terminal for the Windows operat ing systems and minicom for Linux FreeSBD etc e A Null modem serial cable How to use Serial Flash for Boot Sector Recovery 1 Connect a Null_modem serial cable between the target system and the host system that runs the terminal program 2 Make sure that the new BIOS Image file is accessible for the host system 3 Start the terminal program on the host system and create a
15. D 1 Dal Remote On Off Cone ination mesie ee e a E R D 1 D 2 Remote On Only Configuration meeteeonteeeonneeeonneeeoneeeennneeonneeeenneeee D 2 D 3 Ordering the Remote On Off Switch mieteeeenneeenneeeonneeeenneeeenneeeenneee D 2 Appendix E Optional RES Audio USB Serial Port Module A D 1 EI RES Audio USB Serial Port Custom Module ss nsnnssensseessesessseeseesseesssessseessese D 1 EJ Attach 1 O Cables ssnst inas ien si RE i D 3 E 1 2 Connector POOLS EE D 4 E 1 2 1 USB Ports A and B1sivsijvatamititsaiasbs aas bt dee ni inara D 4 E 1 2 2 Serial Port COMI ssicsssssiaccisesdearssdssacdvasdceensateseiecs eaa D 5 E 1 2 3 Stereo Audio Ports Optional eieenrevonanevenaneoenavasenaveeene D 6 E 2 Ordering the RES Audio USB Serial Port Custom Module D 7 xiii Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Appendix F Repackaging Instructions 0 ccccccceescecesececesececeseeeesseceeseeeeseeeesaees E 1 F 1 Repackaging for Shipment EE E 1 Bed Packaging RE E 2 F 3 Instructions for Repackaging sic ssiccasssicseccisdeateanstadesandeceveadesscedeus seaesnaseduatanesnad E E 3 Index siidi Saeed tea en ee ecard Index 1 Reader Comment Card xiv Themis Computer Table of Contents List of Figures Figure 1 Rugged Enterprise Server RES 32XR3 Configuration 3 IX Figure 2 Front View of a Standard Rear
16. Drive Removal sesssesssesssesssseeesresseesseesseessseesseesseesses 2 10 2 1 5 3 Storage Drive VALA TAHOMA aka 2 11 2 1 6 Removable 120 mm Fan eren Singel EE eegen 2 12 2 1 6 1 Removing and Installing a 120 mm kan 2 12 GN Ee GN TEE 2 13 2 1 7 1 Removing a Power Supply eessen EEN 2 13 2 1 7 2 Installing a Power Supply enger beet eegen Eelere 2 14 2 2 RACE e EE 2 15 2 2 1 Mounting Brackets senera iania ae at 2 15 2 2 2 Rack Mount Slides Optional 1 4 cccssasseccsesayeadsssatcanscceatenesoonccchestevadteasbass 2 15 Zed Op ratioi sensere e n EE 2 16 2 3 1 Plugging in the AC Power Cords 5 sccc sdcesssccseasacedecedesnsecdesancdantacestaa cones 2 16 23 25 Tumie the System a Silt aata a 2 16 23 30 Gettung Started s EE 2 17 ei COMM gurat oN E 2 17 23 32 AT TISCALI ATION usa aaa 2 17 2 3 4 Turning the System eegend ee eege ee 2 17 3 BIOS Setup Utility EEN 3 1 321 troduction SUGARIS AIS a eae 3 1 3 1 1 Starting BIOS Setup Utility virseestvivsvadavdumtaet haevadeval s taan ad eh aekhunat atika KEE 3 1 3 1 2 How To Change the Configuration Data mettnteeenneeeenneeee 3 2 513 Starting thesSetap Utility E 3 2 viii Themis Computer Table of Contents 3 3 SE EE alea ale t e ete aaaea oeart aen netesi 3 3 3 2 11 Syste OVERVIEW o l o E ta ade E alea A E EE EEE 3 3 3 2 1 1 System re eege ee 3 3 SN Supermicro AS DG DEEN 3 4 FDS gt PROCESSOR EC 3 4 2 CEET 3 4 Advanced Setu
17. F IPMI Naming Key X8uvwxyz RES 32XR3 FIO motherboard X8DAH F supports both audio and video however the naming key does not contain a T in the title Double CPU sockets Single CPU socket Sound chip no graphics chip T Graphics chip no sound chip w Not applicable SATA only SAS 1 0 SAS 2 0 y LN4 Extra gigabit Ethernet controller for two extra ports blank No IPMI e System RES x2XR3S and RES x1XR3 where a BIUIUIOIUI WIEN UI A 2222211 mr A 2 2 2 ee MEN ae ES DI mung CO Figure 2 Front View of a Standard Rear I O RES 32 Chassis Doors Removed Themis Computer Preface e eesee MH g 2 ae Figure 4 Front View of a Front I O RES 32 Chassis Figure 5 Rear View of a Front UO RES 32 Chassis xxiii Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 xxiv The 3RU high 5 25 RES 32XR3 Configuration 3 has been designed to fit into a standard 19 rack and is provided with rack mount brackets with handles Optional rack mount slides are also available The RES 32XR3 is rugged enough to withstand extreme shock up to 35G temperature and EMI such as that associated with such demanding markets as the military aerospace and telecommunications industries Intel processors supported by RES 32XR3 Configuration 3 include either Two Intel 5500 Series Xeon Quad Dual Core CPUs or e Two Intel
18. Figure 2 10 RES 32XR3 Storage Drive Removal sssessseseseeresserssesrresressesrrsrreseesreseresee 2 11 Figure 2 11 The RES 32XR3 Configuration 3 120 mm Fans sssssessseesssessesseseseeeeseee 2 12 Figure 2 12 The RES 32XR3 Power Supply Locking Mechanism ssssseesssessessseeeseee 2 13 Figure 2 13 Right Rack Mount Bracket 2 15 Themis Computer XV RES 32XR3 Installation Manual Configuration 3 xvi Figure 2 14 AC Power Socket and LED on the RES 32XR3 Configuration 3 Rear 2 16 Figure 2 15 System Power Button and LED on the RES 32XR3 Front 2 16 Figure 3 1 Main BIOS Setup Screen sacs cts ses daavcved gies ken taadi kulud tats gas kuta ita kudas k ed ke 3 3 Figure 3 2 Advanced Settings EE 3 5 Le WEE 3 29 kKigure 3 4 Book SCtuin SS omama dm aan 3 31 Figure 35 eut KASS aada Ee 3 33 Figure 3 6 AMI LELSH Hypertermmmm l ege Siate aregieietugdengeage ged Sieie ndEggeget A gege 3 38 Figure 3 7 ROM File Extraction si2c csvis joatevaka kaduda peversdeansaee soveadeunvasaasvanpoviaeedsteaeneasncabsae 3 38 Figure 3 5 FLASH Recovery srecne ee dein diana nde 3 39 Figure A 1 WSB Connector Pinout EE A 2 Figure A 2 COM1 Serial Connector bmnout A 2 Figure A 3 RES 32XR3 SVGA Connector Pinout 00 cc ceeeeceeseceteceteeeeeeeeseeesaeenteenenee A 3 Figure A 4 Ethernet Connector Type RAD A 4 Figure B 1 Screw Locations for Rack Mount Slides snnnseensnseensseesseeeesseessessse
19. I O RES 32 Chassis xxii Figure 3 Rear View of a Standard Rear I O RES 32 Chassis xxiii Figure 4 Front View of a Front I O RES 32 Chassis xxiii Figure 5 Rear View of a Front I O RES 32 Chassis xxiii Figure 1 1 RES 32XR3 Configuration 3 with Rack Mounts 1 1 Figure 1 2 X8DT3 Motherboard Block Duagram 1 3 Figure 1 3 External Features of RES 32XR3 Configuration 3 1 4 Figure 1 4 Major Components of RES 32XR3 Configuration 3 1 5 Figure 1 5 RES 32XR3 Configuration 3 System LEDs and I O Connectors 1 6 Figure 1 6 RES 22XR3 with Front Sound Baffle Installed Front View 1 17 Figure 1 7 RES 22XR3 with Rear Sound Baffle Installed Rear View 1 18 Figure 2 1 Remove the RES 32XR3 Protective Access Cover 2 2 Figure 2 2 Remove Air Flow Deflector Borews cc eccsccccessseeceesesseeecseaeeeenssseeeeeeneaaes 2 4 Figure 2 3 Memory Module Slot Locations eseesesesseseesesssssresseesrssresresseseresressessresressesee 2 5 Figure 2 4 Memory Module Removal 2 6 Figure 2 5 PCI Card Installation RES 32XR3 Configuration 3 metnr 2 7 Figure Zb PCI Card Clamp sisiiivisivcesisssesicsscasacsiscgeatsanbavcava kevad kasaka aaa 2 7 Figure 2 7 The RES 32XR3 Configuration 3 Lithium Battery and Socket 2 8 Figure 2 8 Opening the RES 32XR3 Configuration 3 Front Bezel Doors 2 9 Figure 2 9 Unlocking the RES 32XR3 Storage Drive 2 10
20. LAN 4 each with two embedded LEDs see Figure A 4 Note LAN 3 and LAN 4 are installed on X8DT3 LN4F and X8DTi LN4F moth erboards only Pinout signal descriptions are listed in Table A 5 Link Speed Network Traffic Figure A 4 Ethernet Connector Type RJ45 Table A 5 RJ45 Ethernet Pinout Signals Pin Signal Name Pin Signal Name 1 TRDO 5 TRD2 2 TRDO 6 TRD1 3 TRD1 7 TRD3 4 TRD2 8 TRD3 e The color of the left LED indicates the LAN connection speed Off 10 MHz Green 100 MHz Amber 1 GHz e The right LED when lit indicates LAN activity network traffic A 6 A 4 IPMI Dedicated LAN Port The single IPMI dedicated Ethernet LAN port on the RES 32XR3 rear I O panel has identical pinout and signal descriptions as the LAN Ethernet ports described in Sec tion A 5 Gigabit Ethernet LAN Ports Note that the XSDT3 motherboard does not support IPMI hence does not have the IPMI dedicated LAN port installed Themis Computer Appendix Rack Mount Slide Installation An optional set of two rack mount slides left side and right side is available for all RES 32 systems and should be ordered at the time of purchase The RES 32XR3 chassis contains six threaded screw holes on each side to accommodate 8 32 size screws included with the rack mount slide kit steel slides require four mounting holes and aluminum slides require three mounting h
21. Manual Configuration 3 Version 1 2 a Select the Transfer menu and enter lt Send gt see Figure 3 6 AMI_FLSH HyperTerminal File Edit view Call BAGEA Help 3 Receive File Capture Text Send Text File Press lt Spa ike remote BIOS flash Reg E n remo Capture to Printer d v n y Starting remote flash Upload new BIOS file using Kmodem protocol KKK Figure 3 6 AMI FLSH Hyperterminal b Specify the location of the ROM file and select the proper protocol XMo dem c Press lt Send gt to start ROM File extraction see Figure 3 7 Sen File Folder C Documents and Settings Desktop Filename C Documents and Settings Desktop 3C02 ROM Protocol Ba a Ee Send Close Cancel Figure 3 7 ROM File Extraction Themis Computer 3 BIOS Setup Utility BIOS Recovery d Once the ROM file extraction is completed the message New BIOS re ceived OK will display Starting FLASH Recovery NVRAM data will be destroyed CMOS data will be preserved Ending FLASH Recovery FLASH Update completed successfully Rebooting Figure 3 8 FLASH Recovery 8 After the remote BIOS flash is completed the system will reboot Note AMBIOS Serial Flash will work with any terminal communications pro gram that supports VT 100 and XModem protocols including protocols designed for GNU LINUX amp BSD operating systems such as minicom It is recomme
22. Port 1 Hi Speed USB 2 0 Note Two 2x5 pin USB type A headers 2 ports each USB4 USB5 Serial Ports and USB6 USB7 and 2 USB 4 pin headers USB2 and USB3 can be accessed directly from the motherboard e One DB9 male connector on rear panel to attach a serial device to COM 1 Serial Port SOM RoN Note A second serial port COM 2 can be accessed directly from the motherboard Super VGA Port e 15 pin SVGA connector to attach a monitor device e Standard RJ45 connector to attach one or two gigabit Ethernet LAN line s LAN 1 and LAN 2 Note LAN 3 and LAN 4 are supported by the X8DT3 LN4F mother board only Ethernet LAN Ports IPMI Dedicated LAN e Standard RJ45 connector to attach a dedicated IPMI LAN line Port X8DT3 F and X8DT3 LN4F motherboards only 1 9 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 3 1 10 1 3 1 Chipset Overview Built upon the functionality and capability of the Intel 5520 platform RES 32XR3 Configuration 3 provides the performance required for dual processor based high end systems including optimal configuration options for communications high end CAD systems or database applications Configuration 3 motherboards support up to two quad six core 5600 series or two quad dual core 5500 series Intel 64 bit Xeon processors with a QPI up to 6 4 GT s The supporting Intel chipset consists of e the Intel 5520 Tylersburg chipset
23. Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 8 7 3 3 8 8 3 3 9 3 3 9 1 3 3 9 2 3 3 9 3 Onboard LAN Options ROM Select This feature allows the user to select the onboard LAN Option ROM type The options are iSCSI and PXE default LAN1 Option ROM LAN2 Options ROM LAN3 Option ROM LAN4 Option ROM Select Enabled to enable the onboard LAN1 LAN2 LAN3 or LAN4 ROM This is to boot the computer using a network interface The options are Enabled default and Disabled Super IO Device Configuration Onboard Floppy Controller Select Enable to enable the onboard Floppy Controller The options are Enabled default and Disabled Floppy A This feature allows the user to select the type of floppy drive connected to the system as specified The options are Disabled 360KB 5 1 4 1 2MB 5 1 4 720KB 3 1 2 1 44MB 3 1 2 and 2 88MB 3 1 2 The default setting for Floppy A is 1 44MB 3 1 2 default Serial Porti Address Serial Port2 Address This option specifies the base I O port address and the Interrupt Request address of Serial Port 1 and Serial Port 2 Select Disabled to prevent the serial port from access ing any system resources When this option is set to Disabled the serial port physi cally becomes unavailable Select 3F8 IRQ4 to allow the serial port to use 3F8 as its T O port address and IRQ 4 for the interrupt address The options for Serial Port are Disabl
24. Zeelert isccccssissscccesssscsensttocnsadessdccedannasacadeovseess 3 9 33 32 15 Intel C STATE GOI t aka al la 3 9 3 3 3 16 C State package Ee 3 10 3 33 17 GA Atto Demotion 4 ssc5 s0isscsendctchdeasgasesaetanaaannshpenseeegiaaaaeesaceiartguness 3 10 3 33 18 G3 Atto Demotion 8c sis diewscsesdens gaa cessseadaenehnen k sust kaka 3 10 ix Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 3 19 Clock Spread Spectrum kina s hed gadedvcnatesybeatuwndgasagetabes enee 3 10 3 3 4 Advanced e E EE 3 10 SOA SOPU E WEE 3 10 33 42 GPL EEN erer ee 3 10 3343 OPI Os and E tass avadada manada 3 11 So 4A Memory Prequenty ele d e akkas a 3 11 3 3 4 9 Memory Mode smesse ege ENEE 3 11 3 3 4 6 Demand Scrubbing eeremstuggtetendeegegeeggeN ege leaeanteaedewecesess 3 11 3 3 4 1 Patrol SOU e sissi 3 11 3 3 4 8 Throttling Closed Loop s 3 cas csajcose ces eege degen 3 11 3 3 5 Northbridge Configuration iteeteeenteeeonneeeonneeoneeeonneee enne 3 11 Sede oe ls Ue OA EE 3 12 3 3 5 2 DCA Direct Cache Access cccccecsccccecccesesssnscececeeeeeensnseaeees 3 12 3 3 0 5 DCA ER EE 3 12 3 3 5 4 OH PCI E Max Payload Size sctsjeccssssesesgsdesectacauenctantstaatbedses 3 12 33 99 tek Melkamu 3 12 3 3 5 6 Active State Power Management s sc ss isccadcassseucsasadeeest ege e 3 12 3 3 6 Southbridge Configuration 0 0 cee ceesecsenceceeeeecseeeeceeeeecseeeseeeeeeteeeenaes 3 13 3 3 0 1
25. a x8 slot All slots support cards up to 12 28 inches long Lithium Battery PCI 32 bit 33 MHz Slot PCI Express x4 Slot PCI 32 bit 33 MHz Slot PCI Express 2 0 x8 Slot PCI Express 2 0 x8 Slot PCI Express 2 0 x8 Slot Figure 2 5 PCI Card Installation RES 32XR3 Configuration 3 2 1 3 1 Installing Cards Perform the following steps to install a PCI card 1 Loosen the captive knurled screw on the PCI card clamp see A Figure 2 6 Captive knurled screw PCI card clamp PCI card I O panels 7 total il WITT Hessi LLITITIT u ns I amp i 8 A A Loosen the captive knurled screw B and swing the PCI card clamp upward Figure 2 6 PCI Card Clamp 2 7 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 Swing the PCI card clamp away from the top of the chassis exposing the tops of the PCI card I O panels see B Figure 2 6 3 Locate the empty slot within which a card will be installed see Figure 2 5 4 Install the new card making sure the I O panel is aligned with the chassis opening 5 Repeat Step 3 and Step 4 until all additional cards have been installed 6 Swing the PCI card clamp back to its position over the PCI card I O panels and tighten the captive knurled screw on the PCI card clamp 7 Attach any internal I O cables to the installed PCI cards and carefully fold and tuck any exposed ribbon cables into the cabinet 8 If you have no further insta
26. again will cause the whole system to wake up During the SoftOff state the ATX power supply provides power to keep the required circuitry in the system alive In case the system mal functions and you want to turn off the power just press and hold the power button for 4 seconds This option can be set in the Power section of the BIOS Setup routine Wake On LAN WOL Wake On LAN is defined as the ability of a management application to remotely power up a computer that is powered off Remote PC setup up dates and asset track ing can occur after hours and on weekends so that daily LAN traffic is kept to a min imum and users are not interrupted The motherboard has a 3 pin header WOL to connect to the 3 pin header on a Network Interface Card NIC that has WOL capa bility In addition an onboard LAN controller can also support WOL without any connection to the WOL header The 3 pin WOL header is to be used with a LAN add on card only J Note Wake On LAN requires an ATX 2 01 or above compliant power supply Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 7 1 14 Super UO Controller The Super I O chip storage drive adapter functions include a floppy disk drive controller industry standard 82077 765 compatible e a data separator e write pre compensation circuitry e decode logic e data rate selection e clock generator drive interface control logic e interrupt and DMA
27. amp Installation Manual e D RES 32XR3 Configuration 3 3RU 19 Rack Mount Rugged Enterprise Server with X8DT3 X8DT3 F X8DT3 LN4F Motherboard Configurations Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 32XR3 Configuration 3 Two Guad Dual Core 5500 or Guad Six Core 5600 Xeon CPUs THEMIS THEMIS THEMIS THEMIS ap ap ag THEMIS THEMIS THEMIS THEMIS RES 32XR3 Installation Manual Configuration 3 Version 1 2 October 2011 SuperMicro Motherboards X8DT3 X8DT3 F X8DT3 LN4F THEMIS Themis Computer Americas and Pacific Rim 47200 Bayside Parkway Fremont CA 94538 Phone 510 252 0870 Fax 510 490 5529 World Wide Web http www themis com Themis Computer Rest of World 5 Rue Irene Joliot Curie 38320 Eybens France Phone 33 476 14 77 80 Fax 33 476 14 7
28. and e the ICHIOR IOH 36D With the Intel QuickPath Interconnect QPI controller built in the processor the 5500 5600 Series Processor platform is the first dual processing platform to offer the next generation point to point system interconnect interface replacing Front Side Bus Technology providing substantial system performance enhancement by utiliz ing serial link interconnections allowing for increased bandwidth and scalability The IOH connects to each processor through an independent QuickPath Interconnect link Each link consists of 20 pairs of unidirectional differential lanes for transmis sion and receiving in addition to a differential forwarded clock A full width Quick Path interconnect link pair provides 84 signals Each processor supports two QuickPath links one going to the other processor and the other to the 5520 chip The Intel 5520 platform supports up to 36 PCI Express Gen2 lanes and supports peer to peer read and write transactions The ICH1OR provides up to 6 PCI Express ports six SATA ports and 10 USB connections Features include memory interface ECC x4 x8 Single Device Data Correction SDDC Cyclic Redundancy Check CRC parity protection out of band register access via SMBus memory mirroring memory sparing and Hot plug support on the PCI Express Interface The 5500 5600 Series CPU and the 5520 Chipset e Four 5500 to six 5600 processor cores in each CPU with 8MB shared cache among cores e Two fu
29. below for DMA Mode Select Options Table 3 2 DMA Mode Select Options Option Selected DMA Mode Max Transfer Rate SWDMA 0 Single Word DMA 0 2 1 MB s SWDMA 1 Single Word DMA 1 4 2 MB s SWDMA 2 Single Word DMA 2 8 3 MB s MWDMA 0 Multi Word DMA 0 4 2 MB s MWDMA 1 Multi Word DMA 1 13 3 MB s MWDMA 2 Multi Word DMA 2 16 6 MB s UDMA 0 Ultra DMA 0 16 6 MB s UDMA 1 Ultra DMA 1 25 MB s UDMA 2 Ultra DMA 2 33 3 MB s UDMA 3 Ultra DMA 3 44 4 MB s UDMA 4 Ultra DMA 4 66 6 MB s UDMA 5 Ultra DMA 5 100 MB s UDMA 6 Ultra DMA 6 133 MB s S M A R T For Storage drives Self Monitoring Analysis and Reporting Technology SMART can help predict impending drive failures Select Auto to allow the AMI BIOS to automatically detect storage drive support Select Disabled to prevent the AMI BIOS from using the S M A R T Select Enabled to allow the AMI BIOS to use the S M A R T to sup port storage drive disk The options are Disabled Enabled and Auto default 32 Bit Data Transfer Select Enable to enable the function of 32 bit IDE data transfer The options are Enabled default and Disabled Themis Computer 3 BIOS Setup Utility 3 3 7 4 3 3 8 3 3 8 1 3 3 8 2 3 3 8 3 3 3 8 4 3 3 8 5 3 3 8 6 Advanced Setup Configurations IDE Detect Timeout sec Use this feature to set the time out value for the BIOS to detect the ATA ATAPI devices installed in the system The
30. can easily order an optional RES Audio USB Serial Port Custom Module see Figure E 1 that is installed at the Themis factory into an available stor age drive bay see following Caution Custom Module Ss Custom Module PCB I O Connectors Figure E 1 RES Audio USB Serial Port Custom Module E 1 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Module to the RES motherboard the RES Custom Module must be installed at the Themis factory before being shipped to the customer Do not attempt to remove the RES Custom Module from its drive slot unless you have some hardware experience see the following paragraph Figure E 2 and Figure E 3 on page E 3 H Caution Because connections must be made internally from the RES Custom The RES Audio USB Serial Port Custom Module is installed after first removing one of the existing RES storage drives any one except the boot drive then connect ing the appropriate I O cables from the RES Audio USB Serial Port Custom Module to the external devices After the storage drive has been removed from the system cables from the internal RES motherboard are fed through the open drive slot and attached to the I O headers on the top surface of the Custom Module PCB and the Module is inserted into the vacant drive slot see Figure E 2 Note that a RES 32XR3 FIO is shown in this Appendix although the Module may be installed into any RES system Figure E 3 on pag
31. display mode for the Option ROM Select Keep Current to use the cur rent AddOn ROM Display setting Select Force BIOS to use the Option ROM dis play mode set by the system BIOS The options are Force BIOS default and Keep Current Bootup Num Lock This feature selects the Power on state for Numlock key The options are Off and On default Wait For F1 If Error This forces the system to wait until the F1 key is pressed if an error occurs The options are Disabled and Enabled default Hit Del Message Display This feature displays Press DEL to run Setup during POST The options are Enabled default and Disabled Interrupt 19 Capture Interrupt 19 is the software interrupt that handles the boot disk function When this item is set to Enabled the ROM BIOS of the host adaptors will capture Interrupt 19 at boot and allow the drives that are attached to these host adaptors to function as bootable disks If this item is set to Disabled the ROM BIOS of the host adaptors will not capture Interrupt 19 and the drives attached to these adaptors will not func tion as bootable devices The options are Enabled default and Disabled Power Configuration Power Button Function If set to Instant_Off the system will power off immediately as soon as the user hits the power button If set to 4 Second Override the system will power off when the user presses the power button for 4 seconds or longer The options are Instant_Off
32. invisible laser radiation is emitted Do not allow yourself to be exposed to this radiation The laser system meets the code of Federal Regulations 21 CFR 1040 for the USA and Canadian Radiation Emitting Devices Act REDR C 1370 Electrostatic Discharge ESD A sudden discharge of electrostatic electricity can destroy static sensitive devices or micro circuitry Proper packaging and grounding techniques are necessary pre cautions to prevent damage Always take the following precautions 1 Transport boards in static safe containers such as boxes or bags 2 Keep electrostatic sensitive parts in their containers until they arrive at static free stations 3 Always be properly grounded when touching a sensitive board component or assembly 4 Store electrostatic sensitive boards in protective packaging or on conductive foam Grounding Methods Guard against electrostatic damage at workstations by following these steps 1 Cover workstations with approved anti static material Provide a wrist strap connected to a work surface and properly grounded tools and equipment Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 Use anti static mats heel straps or air ionizers to give added protection 3 Handle electrostatic sensitive components boards and assemblies by the case or the PCB edge 4 Avoid contact with pins leads or circuitry 5 Turn off power and input signals before inser
33. is corrupted When the system is powered on the boot sector code executes first Once it is completed the main BIOS code will con tinue with system initialization and complete the bootup process Note BIOS Recovery described below is used when the main BIOS block crash es However when the BIOS Boot sector crashes you will need to send the moth erboard back to Supermicro for RMA repairs Boot Sector Recovery from a USB Device This feature allows the user to recover a BIOS image using a USB device without additional utilities needed A user can download the BIOS image into a USB flash device and name the file SUPER ROM for the recovery process to load the file A USB flash device such as a USB Flash Drive a USB CDROM or a USB CDRW device can be used for this purpose 1 Insert the USB device that contains the new BIOS image the ROM files saved in a root directory into your USB drive 2 While turning the power on press and hold lt Ctrl gt and lt Home gt at the same time until the USB Access LED Indicator comes on This might take a few seconds Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 Once the USB drive LED is on release the lt Ctrl gt and lt Home gt keys AMI BIOS will issue beep codes to indicate that the BIOS ROM file is being updated 4 When BIOS flashing is completed the computer will reboot Do not interrupt the flashing process until it is completed 3
34. on page C 10 C 9 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 C 10 RED HAT ENTERPRISE LINUX 5 The GRUB boot loader will be installed on devisda No Boot loader will be installed You can configure the boot loader to boot other operating systems it will allow you to select an operating system to Boot feom the list To add additional operating systems which are not automatically detected click Add To change the operating system booted by default select Default by the desired operating system Default Labet Device Add Red Hat Enterprise Linux Server Mev VoiGroup00 Logvel00 Ealt Qelete A boot loader password prevents users from changing options passed to the kernel For greater system security it is recommended that you set a password Use a boot loader password Contigure advanced boot loader options B Release Notes a Back Se Next Figure C 10 Setting Up Boot Loader To configure more advanced boot loader options such as changing the drive order or passing options to the kernel be sure Configure advanced boot loader options is selected before clicking Next Step 11 Now that you have chosen which boot loader to install you can also deter mine where you want the boot loader to be installed You may install the boot loader in one of two places The master boot record MBR This is the recommended place to install a boot loader unless the MBR al
35. options are 0 sec 5 10 15 20 25 30 and 35 default PCI PnP Configuration Clear NVRAM This feature clears the NVRAM during system boot The options are No default and Yes Plug amp Play OS Selecting Yes allows the OS to configure Plug amp Play devices This is not required for system boot if your system has an OS that supports Plug amp Play Select No default to allow the AMI BIOS to configure all devices in the system PCI Latency Timer This feature sets the latency Timer of each PCI device installed on a PCI bus Select 64 to set the PCI latency to 64 PCI clock cycles The options are 32 64 default 96 128 160 192 224 and 248 PCI IDE Bus Master When enabled the BIOS uses PCI bus mastering for reading writing to IDE drives The options are Disabled and Enabled default SR IOV Supported Select Enabled to enable Single Root I O Virtualization SR IOV support that works in conjunction with the Intel Virtualization Technology and allow multiple operating systems running simultaneously within a single computer via natively sharing PCI Express devices in order to enhance network connectivity and perfor mance The options are Enabled and Disabled default Slot 1 Option ROM Slot 6 Option ROM Select Enabled to enable Slot 1 Option ROM Slot 6 Option ROM which will allow you to boot the computer from a PCI device installed on a PCI slot The options are Disabled and Enabled default 3 17
36. run multiple operating systems and applications in independent partitions creat ing multiple virtual systems in one physical computer The options are Enabled default and Disabled Note If there is any change to this setting you will need to power off and restart the system for the change to take effect Please refer to Intel s website for detailed information Execute Disable Bit Capability Available when supported by the OS and the CPU Set to Enabled to enable the Execute Disable Bit support which will allow the pro cessor to designate areas in the system memory where an application code can exe cute and where it cannot thus preventing a worm or a virus from flooding illegal codes to overwhelm the processor or damage the system during an attack The default is Enabled default Refer to Intel and Microsoft Web Sites for more infor mation Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations 3 3 3 9 Intel AES NI Available when supported by the OS and the CPU If set to Enabled Intel AES NI will add new encryption features to help accelerate AES SW application providing code authorization and signature verification to enhance system security The default is Disabled Refer to Intel and Microsoft web sites for more information 3 3 3 10 Simultaneous Multi Threading Available when supported by the CPU Set to Enabled to use the Simultaneous Multi Threading Technology which will
37. s such as VFAT or FAT32 partitions e Use free space on selected drives and create default layout select this option to retain your current data and partitions assuming you have enough free space avail able on your hard drive s Using your mouse choose the storage drive s on which you want Red Hat Enter prise Linux to be installed If you have two or more drives you can choose which drive s should contain this installation Unselected drives and any data on them are not touched Themis Computer C 7 RES 32XR3 Installation Manual Configuration 3 Version 1 2 To review and make any necessary changes to the partitions created by automatic partitioning select the Review option After selecting Review and clicking Next to move forward the partitions created for you in Disk Druid appear You can make modifications to these partitions if they do not meet your needs see Figure C 8 insulation requires partitioning of your hard drive By default a partitioning Layout is chosen which is feasonatee for most users You can either choose aikins a H Remove ant partitions on selected drives and create default layout Remove linux partitions on selected drives and create default layout Use free space on selected drives and create default layout Create custom layout p Advanced storage configuration Heyliw and modify partitioning layout E Release Notes Back Next Figure C 8 Reviewing Option Click Next once
38. safety precautions during installation operation or maintenance of the equipment are given in the section entitled Safety Instructions on page iv WARNINGS and CAUTIONS The definitions of WARNINGS and CAUTIONS as used in this document are given in the Preface in the section entitled Notes Cautions Warnings and Sidebars Themis Customer Support North America South America and Pacific Rim Telephone 510 252 0870 Fax 510 490 5529 E mail support Othemis com Web Site http www themis com RES 32XR3 Installation Manual Configuration 3 Version 1 2 October 2011 Part Number 117023 024 RES 32XR3 Installation Manual Configuration 3 Version Revision History CESIOM ELi isast aada oan esis seame ctober e Corrected year of copyright on page ii Added the Chapter Number to the header of all odd pages Added index entries to the manual Added P N 118188 024 to Table 2 page xxi Added clarifying text to Table 1 2 on page 1 2 regarding SAS SATA support Added Table 1 3 Power Supply LED Behavior on page 1 7 Updated Chapter 3 BIOS Setup Utility to the current AMI Revision Moved Repackaging for Shipment to Appendix F Added Appendix E Optional RES Audio USB Serial Port Module to manual Added Deep to the size in inches located in the title of the three manual matrix tables in the Preface Assorted minor edits and changes throughout the manual Version E DEE January 201
39. the log before clearing the BMC Event Log Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 16 Set LAN Configuration Set this feature to configure the IPMI LAN adapter with a network address as shown in the following graphics 3 3 16 1 Channel Number Enter the channel number for the SET LAN Config command This is initially set to 1 default Press or on your keyboard to change the Channel Number 3 3 16 2 Channel Number Status This feature returns the channel status for the Channel Number selected above Channel Number is OK or Wrong Channel Number 3 3 16 3 IP Address Source This feature allows the user to select how an IP address is assigned to a client com puter or network device Select DHCP Dynamic Host Configuration Protocol to allow a client computer or device obtains an IP address from a DHCP server that manages a pool of IP addresses and network information on a reguest and grant basis Upon time out or lease expiration the IP address assigned to the client can be reassigned to a new client Select Static Static Allocation to allow the host server to allocate an IP address based on a table containing MAC Address IP Address pairs that are manually entered probably by a network administrator Only clients with a MAC address listed in the MAC IP Address Table will be assigned an IP address The IP Address allocated to the client is on a
40. to avoid possible boot failure 3 2 Themis Computer 3 BIOS Setup Utility 3 2 3 2 1 3 2 1 1 Main Setup When you first enter the AMI BIOS Setup Utility you will enter the Main setup screen You can always return to the Main setup screen by selecting the Main tab on the top of the screen The Main BIOS Setup screen is shown below BIOS SETUP UTILITY Sustem Time Figure 3 1 Main BIOS Setup Screen System Overview The following BIOS information will be displayed System Time System Date Use this option to change the system time and date Highlight System Time or System Date using the arrow keys Enter new values through the keyboard and press lt Enter gt Press the lt Tab gt key to move between fields The date must be entered in Day MM DD YY format The time is entered in HH MM SS format Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Note The time is in the 24 hour format For example 5 30 P M appears as 17 30 00 3 2 1 2 Supermicro X8DTi e BIOS Build Version This item displays the BIOS revision used in your sys tem e BIOS Build Date This item displays the date when this BIOS was completed e AMI BIOS Core Version This item displays the revision number of the AMI BIOS Core upon which your BIOS was built 3 2 1 3 Processor The AMI BIOS will automatically display the status of the processor used in your system e CPU Type This it
41. you have made your selections to proceed Step 9 If you chose one of the automatic partitioning options and selected Review you can either accept the current partition settings click Next or modify the setup using Disk Druid the manual partitioning tool If you chose to create a custom layout you must tell the installation program where to install Red Hat Enterprise Linux This is done by defining mount points for one or more disk partitions in which Red Hat Enterprise Linux is installed You may also need to create and or delete partitions at this time see Figure C 9 on page C 9 C 8 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Drive dev sda 10237 MB Model VM VMware Virtual S TE 10134 Mg New Eat Delete Reset RAID LVM Mount Pointy Size Device ch Type Format 148 Start End v LVM Volume Groups VoIGroupoo 10080 Logvo101 swap 1984 L gvoig ext3 8096 T Mar Drives _ Hide RAID device AVM Volume Group members D Betease Notes gack E Next Figure C 9 Creating a Custom Layout Click Next Step 10 Once you have configured your partitions set up a boot loader If you select No Boot Loader will be Installed you ll need to use a third party boot loader such as Partition Magic or Microsoft s TLDR Unless you want to set up a Boot Loader Password or Configure Advanced Boot Loader Options see Figure C 10
42. 1 Added Version number to header of even pages Added footnote in Table 2 stating that the RES XR3 17 07 Deep chassis mod els would be referred to as 17 Deep Added footnote in Table 1 6 stating that specifications are dependent on config uration in this manual Added info in Table 1 4 indicating that motherboard X8DT3 LN4F includes two extra LAN ports LAN 3 amp 4 Added note about BIOS fan speed being set to quietest mode Energy Saving ES Assorted minor edits and changes throughout the manual Version TEE August 2010 a iii Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Safety Instructions To maximize user safety and ensure correct device operation all instructions con tained in this section should be read carefully Caution It is important that the user observe all warnings and instructions that are on the device and contained in this manual e The device must be used in accordance with the instructions for use e Electrical installations in the room must correspond to the requirements of respective regulations e Take care that there are no cables particularly mains cables in areas where persons can trip over them e Do not use a mains connection in sockets shared by a number of other power consumers Do not use an extension cable e Only use the mains cable supplied e The unit is completely disconnected from the power source only when the power cord is d
43. 7 89 Copyright 2011 Themis Computer Inc ALL RIGHTS RESERVED No part of this publication may be reproduced in any form by photocopy microfilm retrieval system or by any other means now known or hereafter invented without the prior written permission of Themis Computer The information in this publication has been carefully checked and is believed to be accurate However Themis Computer assumes no responsibility for inaccuracies Themis Computer retains the right to make changes to this publication at any time without prior notice Themis Computer does not assume any liability arising from the application or use of this publication or the product s described herein RESTRICTED RIGHTS LEGEND Use duplication or disclosure by the United States Government is subject to the restrictions set forth in DFARS 252 227 7013 c 1 i and FAR 52 227 19 TRADEMARKS and SERVICEMARKS Themis is a registered trademark of Themis Computer Inc Intel and Xeon are registered trademarks of Intel Corporation Red Hat is a registered trademark of Red Hat Inc Linux is a registered trademark of Linus Torvalds All other trademarks servicemarks or registered trademarks used in this publication are the property of their respective owners CE Marking CE This product complies with the European EMC Directive 2004 108 EC and the European Low Voltage Safety Directive 2006 95 EC Safety Precautions Instructions regarding
44. CI card I O on the rear of the RES 32XR3 Configuration 3 reguires opening the rear sound baffle door To do this loosen the four 4 captive knurled Phillips screws A holding the baffle door to the chassis see A in Figure 1 7 and swing the door downward away from the chassis exposing the rear connectors and PCI cards Removing the protective top cover for access to the interior reguires that the rear sound baffle be totally removed this can be done with the baffle door closed To do this five 5 M3x4 flathead Phillips screws B must be removed two on each side of the baffle and one captive in the middle on the top see Figure 1 7 After removing the rear baffle the top cover can be removed as described in Section 2 1 1 Remove Protective Top Cover on page 2 1 Chapter 2 Installation and Operation Themis Computer 1 Overview and Specifications 1 9 Packaging and Shipping The RES 32XR3 Configuration 3 is packaged in a reusable shipping container Approximate weight of an empty container and two AC power cords is 8 8 pounds 4 kg The approximate weight of a RES 32XR3 Configuration 3 loaded with 2 CPUs 6 DIMMs 2 storage drives 2 full length PCI cards a CD RW DVD ROM drive and 2 power supplies is approximately 28 5 pounds 12 9 kg See Table 1 8 page 1 20 for a general weight table for all models of the RES Series of computers The approximate weight of a manual and associated shipping paperw
45. DRAM 1 2 memory modules 2 4 Electrical Specifications 16 Electrostatic Discharge 1 17 EMI xxiv Environmental Specifications 7 ESD grounding techniques 2 protected mat 2 Ethernet A 4 Exit Options Screen 3 33 Expansion slots 2 F flanges 2 15 FLASH Recovery Screen 3 39 floppy disk drive 4 form factor 3RU 2 front bezel 2 9 front panel 4 fused AC 1 16 G General Specifications 7 15 Gigabit Ethernet A 4 graphics card 2 17 I I O Cables Themis Computer Index attaching D 3 I O Connectors Ethernet LAN Port 9 PS 2 keyboard 1 9 PS 2 mouse 1 9 Serial Ports 1 9 USB Serial Ports 1 9 I O connectors 6 TO faceplates 1 4 ICHIOR Southbridge 2 ICH10R IOH 36D xxiv Installation procedures 2 7 installing rack mount slides B memory modules 2 4 PCI cards 2 7 Intel 5520 Tylersburg chipset xxiv Intel 5520 chipset 2 Intel Xeon CPU xix Intel Xeon CPU 1366 pin 2 Introduction 3 K keys front bezel 7 19 L LAN port A 4 latch locks 1 4 LEDs 1 6 NIC Gb Ethernet 8 system 1 4 Linux 5 Installation C Linux Installation 2 17 Creating a Custom Layout C 9 Edit Interface Pop Up Screen C 13 Enter Installation Number C 6 Installation Begins C 8 Installation is Complete C 9 Language Selection C 4 Login Screen C 20 Master Boot Record MBR C 71 Network Devices List C 12 Option to Review or Continue C 18 Optional Packages C 17 Package Installation Default Screen C 16 Pa
46. Installation Installation Step 3 Press Enter and you will see the Welcome screen Welcome screen does not prompt you for any input From this screen you can access the Release Notes for Red Hat Enterprise Linux 5 0 0 by clicking on the Release Notes button see Figure C 3 on page C 3 RED HAT ENTERPRISE LINUX 5 RED HAT ENTERPRISE LINUX 5 ECT SA ETA Figure C 3 Welcome Screen Click on the Next button to continue Step 4 Using your mouse select a language to use for the installation The lan guage you select here will become the default language for the operating system once it is installed Selecting the appropriate language also helps target your time zone configuration later in the installation The installation program tries to define the appropriate time zone based on what you specify on this screen see Figure C 4 on page C 4 C 3 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Qni tulpi a lis yuu a S E e T Siiner mp Geta bagage ter ie rimm English ia Additional Language e longus usa gt Support Soletti ark liimal languages ko stall wm bhe esteem nigh nA Le Se E E Engen gan gg E Sea otault language e do language will be the language Kon ed Korg Select Dated Dorey Used on the system once fg e installation is complete If you IO Engish mia Reset choose to install other D Engish dee talad languages itis possible
47. J10 Pin 7 Figure E 4 Dual USB Connector Pinouts Table E 1 Dual USB Connector Pinout Signal Descriptions J10 Pin Signal Name Pin Signal Name 1 5V 2 5V 3 DM Data Minus 4 DM Data Minus 5 DP Data Plus 6 DP Data Plus 7 Ground 8 Ground 9 Cut Off for Keying 10 No Connection Themis Computer Header E Optional RES Audio USB Serial Port Module RES Audio USB Serial Port Custom Module E 1 2 2 Serial Port COM1 The RES Custom Module supports one male DB9 serial port connector J9 on the front I O panel see Figure E 5 COM1 The COM pinout is listed in Figure E 5 pinout signal descriptions are described in Table E 2 which also shows the serial header J8 connections to serial port J9 Serial Port COM1 1 5 ere 6 9 J8 Header Figure E 5 COM1 Serial Connector Pinout Table E 2 COM1 Serial Connector Pinout Signal Descriptions J8 and J9 J8 Signal Connected J8 Signal Connected J8 Signal Connected Pin Name to J9 Pin Pin Name to J9 Pin Pin Name to J9 Pin 1 DCD 1 4 RTS 7 7 DTR 4 2 DSR 6 5 TXD 3 8 RI 9 3 RXD 2 6 CTS 8 9 GND 5 Themis Computer E 5 RES 32XR3 Installation Manual Configuration 3 Version 1 2 E 1 2 3 Stereo Audio Ports Optional The RES Custom Module supports one optional Stereo Audio Out jack on the front VO panel see Figure E 6 The Stereo Audio Out pinout is
48. N4F Configuration 4 X8DTN 2 117024 024 117019 024 Configuration 5 Gh 2 117025 024 117020 024 9 X8DA3 Configuration 6 X8DAH F 2 117026 024 117021 024 Configuration 7 X8DTU F 117280 024 116970 024 Naming Key X8Dvwxyz e System RES x2XR3 where x 3 2 or 1 v A Sound chip no graphics chip T Graphics chip no sound chip Configuration 6 motherboard X8DAH F supports both audio and video however the naming key does not contain a T in the title w H Two Tylersberg Northbridge chips blank One Tylersberg Northbridge chip U Motherboard with cutout x i SATA only 3 SAS1 0 6 SAS2 0 y LN4 Extra gigabit Ethernet controller for two extra ports z F IPMI blank No IPMI a All motherboards measure 12 W x 13 L except X8DTN and X8DAH F which are 13 68 W x 13 L XX Themis Computer Preface Table 2 RES x2XR3S RES x1XR3 17 Deep Chassis Manual Matrix AC and DC Power Supplies Mother GE RES 32XR3S RES 22XR3S RES 12XR3S RES 31XR3 RES 21XR3 RES 11XR3 board kets Manual P N Manual P N Manual P N Manual P N Manual P N Manual P N X8DTL 6F 2 117408 024 117412 024 117416 024 X8DTL 6 X8DTL 3F 2 117409 024 117413 024 117417 024 X8DTL 3 aca 2 117410 024 117414 024 117418 024 X8DTL i BOON 2 117411 024 117415 024 117419 024 X8DAL i X8SAX 1 117420 024 117421 024 X8ST3 F 1 117 024 117422 024 X8STE SE 9 X8STi Sa
49. Supermicro retains the option to include omit or change any of these text messages The AMI BIOS Setup Utility uses a key based navigation system called hot keys Most of the AMI BIOS setup utility hot keys can be used at any time during the setup navigation process These keys include lt F1 gt lt F10 gt lt Enter gt lt ESC gt arrow keys etc Note Options printed in Bold are default settings How To Change the Configuration Data The configuration data that determines the system parameters may be changed by entering the AMI BIOS Setup utility This Setup utility can be accessed by pressing lt Del gt at the appropriate time during system boot Starting the Setup Utility Normally the only visible Power On Self Test POST routine is the memory test As the memory is being tested press the lt Delete gt key to enter the main menu of the AMI BIOS Setup Utility From the main menu you can access the other setup screens An AMI BIOS identification string is displayed at the left bottom corner of the screen below the copyright message Caution Do not upgrade the BIOS unless your system has a BIOS related issue Flashing the wrong BIOS can cause irreparable damage to the system In no event shall Supermicro be liable for direct indirect special incidental or consequential damages arising from a BIOS update If you have to update the BIOS do not shut down or reset the system while the BIOS is updating This is
50. USB Functions ahe aal ee 3 13 3 30 27 Legacy USE Supporto atta Sees BA eee 3 13 3 3 0 3 USB 2 0 Controller eieiei nenatis 3 13 3 3 6 4 USB 2 0 Controller Mode 13441444 seth ieatieaineie eel 3 13 3 3 0 5 BIOS EHET Aid OL Essa ons ganas aaa 3 13 5 70 0 Reserved Page R l siiis nioen 3 13 3 3 7 IDE SATA Configuration cos scsetsisiadiccisdeatasscsaaea coacteteus seed enda kuva cranes 3 14 3 3 7 1 SATA 1 Configuration ee deeg 3 14 3 3 7 2 SATA 2 Configuration ee 3 14 3 3 7 3 Primary IDE Master Slave Secondary IDE Master Slave Third IDE Master and Fourth IDE Master 3 14 3 3 7 4 IDE Detect Timeout sec usa 3 17 3 3 8 PCI PnP Config ralioni ed eeEhedeed ERAN usk kava inin 3 17 3 3 8 1 Clear NVRAM EE 3 17 3 302 PIS Play OS eege 3 17 3 303 E 110571 753010 bt AE SR 3 17 S504 ECK IEN Bus Master Geseit Age ie 3 17 33 03 SRIOV SUP POM EE 3 17 3 3 8 6 Slot 1 Option ROM Slot 6 Option ROM ssssenseeseesessesssressees 3 17 3 3 8 7 Onboard LAN Options ROM Select eee eeeeeeeeeeeeeeseeeeeees 3 18 Themis Computer Table of Contents 3 3 8 8 LANI Option ROM LAN2 Options ROM LAN3 Option ROM LAN4 Option ROM A 3 18 3 3 9 Super IO Device Configuration k ike ei ete algae aa 3 18 3 3 9 1 Onboard Floppy Controllers nat icin A Eege 3 18 3 39 2 Floppy ET 3 18 3 3 9 3 Serial Port Address Serial Port Address 3 18 3 3 24 Serial Ports ELE 3 19 3 3 10 Remote Access Configuration 1 445w6w1v55k
51. Use industry standard ESD grounding techniques when handling all N components Wear an antistatic wrist strap and use an ESD protected mat Store ESD sensitive components in antistatic bags before placing them on any surface Handle all IC cards by the front panel or edges only To install or replace a storage drive fan or power supply skip the next section and proceed directly to page 2 9 page 2 12 or page 2 13 respectively Replacement of motherboard components requires removal of the protective cover 2 1 1 Remove Protective Top Cover To access a motherboard component open the RES 32XR3 as follows Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 Loosen the two captive Phillips screws holding the protective top access cover to the rear of the RES 32XR3 Configuration 3 chassis see A Figure 2 1 2 Both the front and sides of the cover have flat hooks or tabs underneath that fit under slots on the chassis top edges see B Figure 2 1 Remove the cover by sliding it toward the rear until it is free of these chassis slots 3 Store the cover in a safe place until it is replaced Rear View ll BTML et Mm 19 Wm 1 A Loosen the 2 captive access cover screws Chassis slot Chassis slot Left side top edge B and slide the top cover toward the rear until the top hooks and tabs clear all chassis slots Figure 2 1 Remove the RES 32XR3 Protective Access Cover 4 Procee
52. Wet Bulb 7 15 Noise Level 7 17 Packaging and Shipping 19 Plug Type 1 16 Power Factor 16 Relative Humidity 5 Shock 2 17 Temperature 5 Weight 7 15 Stereo Audio Jack D 3 Stereo Audio Ports D 6 Storage Drives 2 10 storage drives 2 7 installation 2 77 storage drives removal 2 10 Super I O 1 14 SuperMicro X8DT3 motherboard xix SuperMicro X8DT3 F motherboard xix SuperMicro X8DT3 LN4F motherboard xix SVGA connector 2 17 Switch module Remote D system LEDs 6 NIC Gb Ethernet 8 Overheat 1 8 Power 1 8 Power Fail LED 7 Power Fail LED Left 1 7 Power Fail LED Off 7 Power Fail LED Right 7 System Power 1 16 T Technical Support 9 temperature xxiv Themis Customer Support ii TTYA COM1 A 2 Turning the System Off 2 17 Turning the System On 2 16 U UARTs 1 14 USB Port A and Port B D 3 USB Ports D 4 USB ports A 2 D 4 USB Serial Ports 1 9 V Version Revision History iii Version 1 0 iii Version 1 1 lii Version 1 2 iii W Warnings xxv Website Information xxiv X Xeon processors 1 2 Index 5 Themis Computer RES 32XR3 Installation Manual Version 1 2 Index 6 Themis Computer Place Stamp Here Themis Computer 47200 Bayside Parkway Fremont CA 94538 Attn Publications Department lb SINSHL Reader Comment Card We welcome your comments and suggestions to help improve the RES 32XR3 Installation Manual Configuration 3 Please take time to let us kno
53. a PCI E X8 Intel ICH10R E x kr O a r PCI E X4 bai Lane 1 2 3 4 Lane 5 USB 2 0 Lane 6 gt PCI E X8 DMI a emt m ni LPC PCI 33MHz Mir e PCI 33 Rame i coM 1 COM 2 External Internal Figure 1 2 X8DT3 Motherboard Block Diagram Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 3 5 Floppy Disk Drives Optional CD RW DVD ROM or 2 88 MB DAT Drive Optional Combo Slimline Drive System Power Remove Blank Cover Plate Front View Doors Removed ON OFF Switch a 2 nae WU Wu i Storage Drive total of 8 aus see Figure 1 si 17 43 4 cm 19 with Rack Mounts a X 20 50 8 cm deep Dual Power Supplies a PS1 PS2 PCI Slot 32 bit 33 MHz PCI Express x4 slot PCI Slot 32 bit 33 MHz Rear View Slot 7 not installed Power Supply Latch Lock AC Power Socket 3 prong NEMA 15 PCI Express 2 0 x8 slot PCI Express 2 0 x8 slot Rear I O Panel see Figure 1 5 page 1 7 PCI Express 2 0 x8 slot Figure 1 3 External Features of RES 32XR3 Configuration 3 Front and Rear The RES 32XR3 front panel houses eight removable storage drives see Figure 1 3 In addition the front panel supports a CD RW DVD ROM combo slimline drive and a 1 44 MB 3 5 floppy disk drive optional or a single 2 88 MB DAT drive optional All motherboards support both SAS and SATA II drives If supported a combina
54. age 2 16 2 Locate the drive to be removed 3 Insert the barrel lock key into the hard drive you want to remove and turn it 45 degrees clockwise presuming the disk drive is locked see A in Figure 2 10 page 2 11 4 Firmly push in the latch lock until the latch handle releases away from the drive see B in Figure 2 10 5 Grab the latch handle and pull the drive completely away from its slot see C in Figure 2 10 2 10 Themis Computer 2 Installation and Operation Installation Procedures Caution When pulling the storage drive from the chassis hold it at the bot tom to prevent it from falling and damaging the drive A Insert key into barrel lock and turn 45 OAAS Ee B push the latch lock C and pull drive out with the latch handle Latch Handle Figure 2 10 RES 32XR3 Storage Drive Removal 2 1 5 3 Storage Drive Installation To install a storage drive 1 Make sure the latch handle of the drive to be installed is in the open position 2 Properly orient the new drive and insert it into the vacant drive slot If the drive cannot be inserted into the slot rotate it 180 degrees 3 Push the drive toward the rear DO NOT CLOSE the latch handle while push ing until the drive is flush with the front of the chassis The handle will swing closed when it comes into contact with the RES 32XR3 chassis 4 When the drive is fully inserted in its slot insert the key into the barrel lock and
55. anvvotgve t ine d sa navesi t e take deka ve k te 3 19 Joos dl Remote ACCESS yen Ms ina anta eege lelu ties 3 19 3 3 11 Zetting 3 20 3 3 1 1 1 CPU Overheat Games See kenake aka akna 3 20 3 3 11 2 CPU1 Temperature CPU2 Temperature SLOT Pea cnet ee ae ee eA a 3 21 Jll System A CTS T AGUNG vaik abun loves ee 3 22 3 3 11 4 Voltage Motte rein cccecatsussacevesseceesseceaacndenseanss acseqantsuveas 3 22 3 3 11 5 Fan Speed Control Modes 452 d scisusssacsastedetssesoniedsssasaees ocdgertsuvene 3 22 3 3 11 6 Fanl Fan 8 Reading Ae leste eege eegene e 3 23 3 3 12 ACPI Comfi surat EE 3 23 3 3 1 2k DOPL Aware OLS Lauma md imaamist 3 23 3 3 12 2 ACPI Version Features aada kaalus paela 3 23 3 3 12 3 ACPI APIC SUPPO a a i aa e a a aas 3 23 S12 SoA PIC ACRES CLARO EE 3 23 2 21290 Headless EE 3 23 312 05 NUMA Sp DOM maas maia pl ai tai 3 23 3 3127 WHEA SUpport sci jsiesisatiadcisicdsacacastaa Wald cdaaes kekadada kapid elad katab 3 24 3 3 12 8 High Performance Event Timer sesseessseeessessessseesssserssressersse 3 24 SL Trusted OM IPUEIN Ee 3 24 3 3 13 1 TCG TPM Trusted Platform Module Support s ssssssesseeeesee 3 24 33 14 IPM CONT SUPA ON cinsinin ia aaa Ee 3 24 2AA PALS OP BMC ratsa usa 3 25 3 3 14 2 IPMI Firmware Revision EE 3 25 3 3 15 View BMC System Event E 3 25 3 3 15 1 Clear BMC System Event LOS satu 3 25 3 3 16 Set E RE e WEE 3 26 2 3 10 1 Channel N HADET 6 2 i 20 loss tesssece usta aanus t ttas dal g
56. are listed in Table 1 1 on page 1 2 Figure 1 1 RES 32XR3 Configuration 3 with Rack Mounts 1 1 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Table 1 1 RES 32XR3 Configuration 3 Motherboard Options PCl e PCI X and PCI Slots Mother IPMI SATA sas Memory Graph Audio pore Pcre PCke SES x16 x8 x4 X8DT3 Yes Yes 12 Yes 3 1 2 X8DT3 F Yes Yes Yes 12 Yes 3 1 E X8DT3 LN4F Yes Yes Yes 12 Yes 3 1 E a SuperMicro Computer Inc b Two 32 bit 33 MHz PCI slots The RES 32XR3 is designed within a 3RU high 5 25 form factor 20 50 8 cm deep and 17 43 2 cm wide which with mounting brackets fits a 19 wide rack Major features are listed in Table 1 2 Table 1 2 Major Features of the RES 32XR3 Configuration 3 Feature Details Processor CPU e Two 1366 pin Intel quad core 5500 Series or quad six core 5600 Series Xeon CPU up to 6 4 GT s each Chipset e Intel 5520 Tylersburg chipset e ICH10R Southbridge and IOH 36D Memory e Twelve 12 240 pin DIMMs supporting up to 192GB 16GB DIMMs of Regis tered ECC DDR3 1333 1066 800 MHz 72 bit SDRAM Expansion slots e See Table 1 1 for details Rear Panel I O e See Table 1 5 on page 1 9 for details Peripheral Support e Eight SAS or five SATA II storage drives directly
57. automatically disconnect from the chassis Insert the replacement fan carefully into the empty fan slot until it is flush with the second fan The 4 wire connector will automatically engage its counterpart connector successfully 2 12 Themis Computer 2 Installation and Operation Installation Procedures 2 1 7 Power Supply Each load sharing N 1 redundant power supply can be hot swapped while the sys tem is still on and operational 2 1 7 1 Removing a Power Supply Perform the following steps to remove a power supply 1 Remove the two captive Phillips screws holding the power supply locking bracket to the chassis Store the bracket for later use see A in Figure 2 12 Knurled captive Phillips screw 4 LS l i Knurled captive Phillips screw E A Power supply locking bracket 5 1 A Remove power supply locking bracket B men disengage locking lever and remove power supply i System Power LED AC Outlet Phillips Screw Hole Push right to release power supply y for power supply locking bracket Power Suppl Locking Lovet Phillips Screw Hole for knurled captive screw on power supply locking bracket Extraction Handle PARAAAARAAONANANANAAANADANNOANNI Figure 2 12 The RES 32XR3 Power Supply Locking Mechanism 2 13 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 Put the right index finger on the power supply extraction handl
58. ces or click Back to make changes see Figure C 18 on page C 18 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 RED HAT ENTERPRISE LINUX 5 Click next to begin instaliation of Red Hat Enterprise Linux Server A complete fog of tne installation can be found in the file rootinstali iog after rebooting your system A kickstart file containing the Installation options selected can be found in the file root anaconda ks cfg after rebooting the system D Berease Notes as Figure C 18 Option to Review or Continue Click Next Step 19 Installation Starts see Figure C 19 RED HAT ENTERPRISE LINUX 5 installing gllb2 2 12 3 2 1 6 386 2 MB A library of handy utitity functions QD ketease Notes E ba Figure C 19 Installation Begins Themis Computer C Red Hat Enterprise Linux 5 Installation Installation Step 20 Congratulations Your Red Hat Enterprise Linux installation is now com plete The installation program prompts you to prepare your system for reboot Remember to remove any installation media if it is not ejected automatically upon reboot see Figure C 20 RED HAT ENTERPRISE LINUX 5 Congratulations the installation is complete Remove any media used during the Installation process and press the Reboot button to reboot your system J Beierse Notes KJ Reboot Figure C 20 Installation is Complete After you
59. d to the appropriate section to install or replace a memory module page 2 3 PCI card page 2 7 or lithium battery page 2 8 2 2 Themis Computer 2 Installation and Operation 2 1 2 Memory Modules Installation Procedures The RES 32XR3 Configuration 3 supports memory according to Table 2 1 Note the total memory capacity varies according to the motherboard installed in the system Table 2 1 RES 32XR3 Configuration 3 Memory Capacity Memory Parameters Motherboard DDR3 Number Pins per Capacity Registered Speed MHz of DIMMS DIMM ECC X8DT3 192 GB Yes 1333 1066 800 12 240 X8DT3 F 192 GB Yes 1333 1066 800 12 240 X8DT3 LN4F 192 GB Yes 1333 1066 800 12 240 Caution Exercise extreme caution when installing or removing Memory Modules to prevent any possible damage Table 2 2 RES 32XR3 Configuration 3 Memory Population CPU 1 CPU 2 DIMMs Branch 0 Branch 1 Branch 3 Branch 0 Branch 1 Branch 3 6 DIMMs 1A 2A SA 1A 2A SA 12 DIMMs 1A 1B 2A 2B SA 3B 1A 1B 2A 2B SA 3B When installing memory follow these rules for best memory performance e It is strongly recommended that you do not mix memory modules of different speeds sizes and vendors Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 1 2 1 Installation The following procedure explains how to install the DDR3 Memory Module
60. drive order may be useful if you have multiple SCSI adapters or both SCSI and IDE adapters and you want to boot from the SCSI device Click Next Step 12 The installation program automatically detects any network devices you have and displays them in the Network Devices list see Figure C 12 on page C 12 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 RED HAT ENTERPRISE LINUX 5 Network Devices Active on Boot Device iPv4 Netmask 1Pv Prefix Edit Hostname Set the hostname automatically via DHCP 4 manually rmhelS tocaidomain eg host domain com Miscellaneous Settings C peiense Notes pack e Hen Figure C 12 Network Devices List Step 13 Once you have selected a network device click Edit From the Edit Inter face pop up screen you can choose to configure the IP address and Netmask for IPv4 Prefix for IPv6 of the device via DHCP or manually if DHCP is not selected and you can choose to activate the device at boot time If you select Acti vate on boot your network interface is started when you boot see Figure C 13 on page C 13 If you do not have DHCP client access or you are unsure what to pro vide here please contact your network administrator C 12 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation Configure eth0 Advanced Micro Devices AMD 79c970 PCnet32 LANCE Hardware address 00 0C 29 42 45 96 F Mee dynam
61. e E 3 shows the internal connections that are made between the RES Custom Module and the RES motherboard RES 32XR3 FIO eS Seen INNI e 4 nf d e After attaching header cables through a vacant drive slot to RES motherboard headers and optional rear panel audio I O connectors insert the RES Custom Module into the vacant drive slot RES Audio USB Serial Port Custom Module Figure E 2 Install the RES Audio USB Serial Port Custom Module E 2 Themis Computer E Optional RES Audio USB Serial Port Module RES Audio USB Serial Port Custom Module E 1 1 Attach I O Cables Figure E 3 shows the three types of I O supported by the RES Audio USB Serial Port Custom Module e USB Port A and Port B e One Serial Port e One optional Stereo Audio Jack installed only by customer request Figure E 3 also shows the header connectors that are routed by cable through the empty drive slot into the RES system for connection to the proper RES motherboard surface headers or optional rear audio connectors To RES Motherboard surface top side headers To Rear of Chassis gt Optional Connected to any available USB header USB Serial USB to Audio Out Audio In Header Header Audio Chip Line Out Line In Connected to any available Serial header Connected to any available USB header i J10 J8 J1 Connected to an audio connector on the rear ofthe chassis seli Out AMAAN TE Wn Kee Connected
62. e and the right thumb on the left side of the power supply locking lever 3 Squeeze the locking lever toward the pull handle and firmly pull the power supply from the chassis Caution When pulling the power supply from the chassis hold it at the bot tom to prevent it from falling and damaging the unit 2 1 7 2 Installing a Power Supply Perform the following steps to install a power supply 1 Insert the replacement power supply into an empty slot with the extraction handle facing to the right and the power LED at the top see Figure 2 12 on page 2 13 2 Push the power supply carefully into its slot until it is firmly seated a click will be heard when the locking lever is securely fastened to the chassis 3 Replace the power supply locking bracket and tighten the two captive Phillips screws see Figure 2 12 to secure both power supplies 2 14 Themis Computer 2 Installation and Operation 2 2 Rack Mounts 2 2 1 Mounting Brackets The rack mount brackets flanges are used to secure the chassis to the 19 rack see Figure 2 13 Handles are used to pull the RES 32XR3 from the rack when rack mount slides have been installed on the sides of the chassis see following section Right Mounting Bracket Figure 2 13 Right Rack Mount Bracket 2 2 2 Rack Mount Slides Optional Rack Mount Slides can be mounted on each side of the RES 32XR3 Configuration 3 for the purpose of sliding the unit in and o
63. e installation program partition for you You can configure an iSCSI target for installation or disable a dmraid device from this screen by clicking on the Advanced storage configuration button see Figure C 7 on page C 7 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Installation requires partitioning of your hard drive By default a partitioning tayout Is chosen which is reasonable for most users You can eltner choose to use this oF create your own Remove linux partitions on sefected drives and create default layout Select the drive s to use for this installation Advanced storage configuration Reylew and modify partitioning layout _ Retease Notes Back Se Next Figure C 7 Partitioning Click Next to continue Step 8 Create default layout allows you to have some control concerning what data is removed if any from your system Your options are e Remove all partitions on selected drives and create default layout select this option to remove all partitions on your hard drive s this includes partitions cre ated by other operating systems such as Windows VFAT or NTFS partitions e Remove Linux partitions on selected drives and create default layout select this option to remove only Linux partitions partitions created from a previous Linux installation This does not remove other partitions you may have on your hard drive
64. easvenaetateeeareiebervctresncaceravnaede ss kududa aki ovat C 18 Figure C 20 Installation is Complete a vscicactivecadd awn dation eon oot C 19 Figure 21 Lorm Screens sca wench eelere elatas C 20 Figure C 22 Ready to use the DesktO pi wascesaessastgencardstoaeizresensaies aitavad jaaa EN C 20 Figure D 1 Remote On Off Switch Module D 1 Figure E 1 RES Audio USB Serial Port Custom Module D 1 Figure E 2 Install the RES Audio USB Serial Port Custom Module D 2 Figure E 3 Attach the Appropriate I O Cables AA D 3 Figure E 4 Dual USB Connector Pinouts sssoeseesseeeesseseosssseesssseeesssereessereesseseessseesssse D 4 Figure E 5 COMI Serial Connector Pinout ee eeeeceesececseececeteeeceeceeseeeeseeeenaeeees D 5 Figure E 6 Stereo Audio Connector Pinout uk D 6 Figure F 1 Packaging Components 4 ssscecccsassatesacassncssevdqoadsnetoen andes uvesaaveahedacannecesevdynasaea E 2 Figure F 2 Order Or ASSEMABI VA ioii neres ires eoi gesa o goa i gais EESE E 3 List of Tables Table 1 RES x2XR3 20 Deep Chassis Manual Matrix 00 eee ceeceeseeeseeceeeeeeeeeeneees XX Table 2 RES x2XR3S RES x1XR3 17 Deep Chassis Manual Matrix xxi Table 3 Front I O 16 Deep Chassis Manual Matz xxii Table 1 1 RES 32XR3 Configuration 3 Motherboard Options sesssesseseseeeeeeesresrerereeee 1 2 Table 1 2 Major Features of the RES 32XR3 Configuration 3 11 1 2 Table 1 3 Power Supply LED Behavior ingpde
65. ecurely attached to both the right and left outside slide sections install both sections to the inside right and inside left of a 19 rack with two bolts per bracket making sure there is adequate room for the 3 RU height 5 25 of a RES 32XR3 system 5 Carefully insert the RES 32XR3 system into the 19 rack so that the inside slides on both sides of the chassis travel smoothly into the channels of the out side slide sections Push the system into the rack until the mounting brackets on the front of the chassis are flush with the front of the rack 6 Secure the RES 32XR3 system to the 19 rack with two bolts on each side Themis Computer B Rack Mount Slide Installation Outside slide section Attach the rear long slide bracket Ae to the outside slide section with screws washers and nuts included in slide kit id f E Less A ff FH ZA a Us hin SULTS Attach the front short slide bracket REAL i d wii to the outside slide section with screws iiaa i ge washers and nuts included in slide kit NORA Nie M USUD EEA Attach both inside slide sections to the left and right sides of D o the RES 32XR3 chassis with 8 32 screws included in slide kit Figure B 2 RES 32XR3 Rack Mount Slide Installation B 3 Themis Computer
66. ed the equipment This may involve but is not restricted to heavy equipment or D Caution A caution describes a procedure or action that may result in damage to sharp objects To reduce the risk follow the instructions accompanying this symbol to the operator To reduce the risk follow the instructions accompanying this sym Warning A warning describes a procedure or action that may cause injury or death bol Sidebar A sidebar adds detail to the section within which it is placed but is not absolutely vital to the description or procedure of the section XXV Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 xxvi Themis Computer General Section Chapter Overview and Specifications 1 1 Overview The RES 32XR3 Configuration 3 see Figure 1 1 below a block diagram is given in Figure 1 2 page 1 3 is a rack mounted high performance system designed spe cifically for above average shock and vibration environments The RES 32XR3 sup ports two Intel 1366 pin LGA 64 bit 5500 5600 Series Xeon processors each with a QPI Quick Path Interconnect up to 6 4 GT s Giga Transfers per second supporting 192 GB of 1333 1066 800 MHz DDR3 ECC Registered memory mod ules Its computer graphics intensive and diverse I O capabilities are ideal for mili tary aerospace and commercial telecommunications applications Motherboards supported by Configuration 3
67. ed 3F8 IRQ4 default 3E8 IRQ4 2E8 IRQ3 The options for Serial Port2 are Disabled 2F8 IRQ3 default 3E8 IRQ4 and 2E8 IRQ3 Serial Port 2 Mode Use this feature to configure Serial Port 2 mode The options are Normal default IrDA and ASK IR IrDA Infrared Data is an industry standard for remote control devices ASK IR Amplitude Shifted Keying Infrared is a protocol compatible with Sharp branded PDAs and other infrared devices Themis Computer 3 BIOS Setup Utility 3 3 9 4 3 3 10 3 3 10 1 Advanced Setup Configurations Serial Port3 Address This option specifies the base I O port address and the Interrupt Request address of Serial Port 3 Select Disabled to prevent the serial port from accessing any system resources When this option is set to Disabled the serial port physically becomes unavailable Select 3E8 IRQ5 to allow the serial port to use 3E8 as its I O address and IRQ 5 for the interrupt address The options are Disabled and 3E8 IRQ5 default Remote Access Configuration Remote Access This allows the user to enable the Remote Access feature The options are Disabled and Enabled default If Remote Access is set to Enabled the following items will display Serial Port Number This feature allows the user decide which serial port to be used for Console Redirec tion The options are COM 1 COM2 and COM3 default Base Address IRA This item displays the base address and IRO of the se
68. em displays the type of CPU used in the motherboard e Speed This item displays the speed of the CPU detected by the BIOS e Physical Count This item displays the number of processors installed in your system as detected by the BIOS e Logical Count This item displays the number of CPU Cores installed in your system as detected by the BIOS 3 2 1 4 System Memory This displays the size of memory available in the system e Size This item displays the memory size detected by the BIOS 3 4 Themis Computer 3 BIOS Setup Utility 3 3 Advanced Setup Configurations Use the arrow keys to select Boot Setup and hit lt Enter gt to access the submenu items BIOS SETUP UTILITY gt Boot Features Figure 3 2 Advanced Settings Screen 3 3 1 BOOT Features 3 3 1 1 Quick Boot If Enabled this option will skip certain tests during POST to reduce the time needed for system boot The options are Enabled default and Disabled 3 3 1 2 Quiet Boot This option allows the bootup screen options to be modified between POST mes sages or the OEM logo Select Disabled to display the POST messages Select Enabled to display the OEM logo instead of the normal POST messages The options are Enabled default and Disabled Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 6 3 3 1 3 3 3 1 4 3 3 1 5 3 3 1 6 3 3 1 7 3 3 2 3 3 2 1 AddOn ROM Display Mode This sets the
69. en pulling the old module directly up from the slot until it is free of the connector see Figure 2 4 2 5 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 6 Press latch downward amp outward at each end Figure 2 4 Memory Module Removal 3 Before inserting a new memory module into the vacant slot make sure that the two latches are pulled outward away from the center of the slot With the latches in the outward position gently insert the new module verti cally into its slot and press firmly downward until it snaps into place Note Make sure the memory module has the proper orientation by align ing the alignment notch at the bottom edge with its counterpart ridge at the bottom of the slot 4 If all the memory modules have been replaced in the system replace the air flow diverter and secure it with the six screws previously removed 5 Replace the PCI card retainer bracket and secure it with the single screw removed in Step 1 on page 2 4 6 If installation of motherboard components is completed close the RES 32XR3 chassis by refastening the top cover removed in Section 2 1 1 Remove Protective Top Cover on page 2 1 Themis Computer 2 Installation and Operation Installation Procedures 2 1 3 PCI Cards The RES 32XR3 Configuration 3 supports two 32 bit 33 MHz PCI slots three x8 PCI Express 2 0 slot one in a x16 slot and one x4 PCI Express 2 0 slot in
70. er if you don t have an installation number select the Skip Entering Installation Number Radio Button Click OK and if you did not enter an installation number you ll be given a warning Click Skip to continue see Figure C 6 on page C 6 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 C 6 RED HAT ENTERPRISE LINUX 5 Seet the appropriate keyboard for the system ee Th insta tre full set of supported packaipes eile Mi your se rtcriplion please enter your installation Nurme Swiss German Ireteiiatzom Murriteet e Jomar t pulsi Gorman NIRTI Sarp entering instaitanon Nurntver Tani lirmoript Tamis Typewriter H Gei Jo US intematronal Ubracian Unwted tingdom ietmama Noten Po gt M Figure C 6 Enter Installation Number Click Next to continue Step 7 Partitioning allows you to divide your hard drive into isolated sections where each section behaves as its own hard drive Partitioning is particularly useful if you run multiple operating systems On this screen you can choose to create the default layout or choose to manual parti tion using the Create custom layout option of Disk Druid The first three options allow you to perform an automated installation without hav ing to partition your drive s yourself If you do not feel comfortable with partition ing your system it is recommended that you do not choose to create a custom layout and instead let th
71. esseresseee B 1 Figure B 2 RES 32XR3 Rack Mount Slide Installation s sssnesensseeeseeeesseessessseesseresseee B 3 Figure C 1 Power On after Linux DVD is Inserted into Drive sssssessesessssessesessressesee C 2 Figure C2 Su Rey stade Gemeend Eege AE de leede e C 2 Figure C 3 Welcome ageet A Seet EE Eed get C 3 Figure C 4 Language Seleen aaa eee See ae C 4 Figure C 5 Selecting Layout Type ummuksis C 5 Figure C 6 Enter Installation Number C 6 Figure CT P HMIGHING geet EE olk akkas ak a a maaalad C 7 Figure C 8 Reviewing Optio kees aka aa C 8 Figure C 9 Creating a Custom Layout EE C 9 Figure C 10 Setting Up Boot Loader cece cecceeceeesceseceeeceeeeeeseecaecnseeeeeeenseeesaeeneeeeaes C 10 Figure C 11 Master Boot Record MBR cecceeseesseeesseceseceeeeeeeeeeacecaeceeeeaeecnaeeneeseaes C 11 Figure C 12 Network Devices list aaasta atakki add ds C 12 Themis Computer Version 1 2 Table of Contents Figure C 13 Edit Interface Pop Up Screen ic acis enka ia ev oak C 13 Figure C 14 Selecting Time EE C 14 Figure C 15 Setting Up Root Account and Password sseseesssssseseseesesseseesesseesesseseeseserse C 15 Figure C 16 Package Installation Default Screen mteteeeneoneseneoenenneeene et C 16 Figure C 17 Eppes ege Eege C 17 Figure C 18 Option to Review or Continue ssesseeeseeeessesesesssrestssesesesseserstsseesesseseesessese C 18 Figure C 19 Installation Begins i 3 ccciscs jcst
72. from the motherboard with one SATA header being consumed by the CD DVD drive additional SATA support is provided by an optional PCl card installation e 1 combination CD RW DVD ROM slimline IDE drive Operating temperature e 0 up to 65 C 32 up to 149 F Shock endurance e 35G 25 msec duration 3 axis Dimensions 5 25 3RU high 17 43 4 cm wide 19 48 3 cm with mounting brackets 20 43 2 cm deep slides Rack mount brackets and Left and right rack mount tabs are attached to the chassis Left and right rack mount slides are optional Dual power supplies 750 watts each auto ranging 100 265 VAC Load sharing N 1 redundant hot pluggable Optiona Choice of 750 watt 48V or 500 watt 28V DC Power supply a Chassis supports a total of 8 storage drives 1 2 Themis Computer 1 Overview and Specifications Overview VRD 6 Phase VRD 6 Phase gt Processor 2 lt gt Ble le agp Be pg o Ee Eessen d Eegen D I Si 401 Up to 96 GB total DDR3 ECC Up to 96 GB total DDR3 ECC Registered memory per CPU Registered memory per CPU Six 240 pin DIMM Sockets Six 240 pin DIMM Sockets QPI QPI Go 5 Optional PCI E X16 GE Ports 7 10 ao S z LAN 2 Port 7 82576EB z Ports 1 2 DI g Intel 5520 SAS Port 8 LSI 1068 Ports 3 4 Ports 5 6 Pot 0 PCI E X4 ESI PCI E X4
73. ftware Applicable for general internet usage What additional tasks would you like your system to Include support for Software Development Web server You can further customize the software selection now or after install via the software management application Customize jater Customize now i eon n Figure C 16 Package Installation Default Screen Step 17 Select each component you wish to install Once a package group has been selected if optional components are available you can click on Optional packages to view which packages are installed by default and to add or remove optional packages from that group see Figure C 17 on page C 17 If there are no optional components this button will be disabled Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Desktop Environments a GNOME Desktop Environment Applications 57 KDE K Desktop Environment Development Servers Base System Languages GNOME is a powerful graphical user interface which includes a panel desktop system icons and a graphica file manager 32 of 36 optional packages selected Optional packages D Betease Notes agak Next Figure C 17 Optional Packages Click Next Step 18 Once you have selected the package groups of your choice you get one last chance to go back before starting the installation process Click Next if you re happy with your choi
74. g for the shipping container and two AC power cords e The manual and associated shipping paperwork weighs ap proximately 1 Ib 0 5 kg 19 Rack Mountable with Slide capability e Left and right rack mount tabs attached to chassis e Left and right rack mount slides are optional Temperature Operating Non Operating e 0 up to 65 C 32 up to 149 F e 40 to 70 C 40 to 158 F Relative Humidity Operating Non Operating e 8 to 95 non condensing e 5 to 95 non condensing Maximum Wet Bulb Operating Non Operating e 55 C non condensing e 70 C non condensing Altitude Operating Non Operating e 0 to 10 000 feet above sea level e 0 to 40 000 feet above sea level a Specifications are dependent on the configuration in this manual Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 8 2 Electrical Table 1 7 lists the electrical specifications for the RES 32XR3 Configuration 3 Table 1 7 RES 32XR3 Electrical Specifications eee Description AC 120 volts 750W DC 48 volts 750W DC 28 volts 500W Input Power typical e 420 watts typical e 420 watts typical e 450 watts typical Input Current e 3 5 amperes 120 Vac e 13 5 amperes 48 Vdc e 16 amperes 28 Vdc Plug Type e IEC Input Frequency e 47 63 Hertz NA NA Input Voltage 100 265 Vac
75. guration 3 Version 1 2 3 3 12 7 WHEA Support Select Enabled to enable Windows Hardware Error Architecture WHEA support which will provide a common infrastructure for the system to handle hardware errors on Windows platforms to reduce system crashes caused by hardware errors and to improve system recovery and health monitoring The default setting is Enabled 3 3 12 8 High Performance Event Timer 3 3 13 Select Enabled to activate the High Performance Event Timer HPET that produces periodic interrupts at a much higher frequency than a Real time Clock RTC does in synchronizing multimedia streams providing smooth playback and reducing the dependency on other timestamp calculation devices such as an x86 RDTSC Instruc tion embedded in the CPU The High Performance Event Timer is used to replace the 8254 Programmable Interval Timer The options are Enabled default and Dis abled Trusted Computing 3 3 13 1 TCG TPM Trusted Platform Module Support 3 3 14 Select Yes on this item and enable the TPM jumper on the motherboard to enable TCG TPM 1 1 1 2 TPM support in order to improve data integrity and network security The options are No default and Yes If this feature is set to Yes the following items will display TPM Enable Disable Status This item displays the status of TPM Enabled Disabled state TPM Owner Status This item displays the status of TPM Ownership IPMI Configuration Intelligent Platform Manageme
76. gure D 1 which shows the Remote On Off Switch installed in an RES 32XR3 FIO system RES 32XR3 FIO Remote On Off Switch Module Figure D 1 Remote On Off Switch Module D 1 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 The Remote On Off Switch module is installed after first removing one of the exist ing RES 32XR3 storage drives any except the boot drive then installing a cable with a standard male DB9 connector at one end and an On Off switch an LED is optional at the other end When operational if the RES 32XR3 Configuration 3 is turned OFF pressing the remote switch ON will turn the system on D 2 Remote On Only Configuration When the Remote On Off Switch module is configured as an ON only device press ing the remote switch ON will turn the system on Turning the RES system off how ever requires pressing the ON OFF button that is located directly on the front of the RES 32XR3 chassis D 3 D 2 Ordering the Remote On Off Switch Because internal modifications must be made to the RES 32XR3 Configuration 3 in order to support the Remote On Off Switch module the module must be ordered and installed at the time your system is ordered Themis Computer Appendix Optional RES Audio USB Serial Port Module E 1 RES Audio USB Serial Port Custom Module Customers interested in adding audio USB and serial port capabilities to the front of any RES system
77. he storage drives see Figure 2 8 Knurled Screw e gg EE b SVE EEETEETLETEILITLELIA UU RBD ee ass neie ge WILL AURACARARCROCIUAUNAN ULB LUE EEL ET LL E DN 3 H Figure 2 8 Opening the RES 32XR3 Configuration 3 Front Bezel Doors Note For SAS drives the lower left hand removable disk drive SAS IDO is designated as the boot drive For SATA II drives the upper left hand removable disk drive SATA II IDO is designated as the boot drive 2 9 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 1 5 1 Opening the RES 32XR3 Front Doors The knurled captive screw on the front of the RES 32XR3 Configuration 3 allows the doors to lock without a key To unlock the doors turn the screw counterclock wise and pull both doors away from the chassis The accessory kit shipped with your RES 32XR3 contains two barrel lock keys This provides you the option of unlocking locking the storage drives see Figure 2 9 TT AAA TT MIA EE mmm IIAL LB i Rm Drive 1 e Drive EF Drive UU OUR TITTEN m T naive 4 e Drive5 Drive6 Drive 7 ke 14 Drive Release Drive Lock Button one per drive Figure 2 9 Unlocking the RES 32XR3 Storage Drives Front Doors Removed 2 1 5 2 Storage Drive Removal After opening the front bezel cover perform the following steps to remove and install a storage drive 1 Make sure the system is powered off see Operation on p
78. ic IP configuration DHCP Enable IPv4 support Enable IPv6 support i Activate on boot Address Prefix Netmask X Cancel Jox Figure C 13 Edit Interface Pop Up Screen Click OK Step 14 Set your time zone by selecting the city closest to your computer s physical location Click on the map to zoom in to a particular geographical region of the world see Figure C 14 on page C 14 From here there are two ways for you to select your time zone 1 Using your mouse click on the interactive map to select a specific city rep resented by a yellow dot A red X appears indicating your selection 2 You can also scroll through the list at the bottom of the screen to select your time zone Using your mouse click on a location to highlight your selection C 13 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 RED HAT ENTERPRISE LINUX 5 Please click into the map to choose a region America New_ York gt Easter Time System clock uses UTC D Retease Notes Back 4 Next Figure C 14 Selecting Time Zone Click Next Step 15 Setting up a root account and password is one of the most important steps during your installation Your root account is similar to the administrator account used on Windows NT machines The root account is used to install packages upgrade RPMs and perform most sys tem maintenance Logging in as root gives you complete contr
79. ides are optional and can be ordered at the time of purchase Approximate weights of models in the RES series of computers are listed in Table 1 8 To learn how to install rack mount slides refer to Appendix B Rack Mount Slide Installation Table 1 8 Approximate Weights of the RES Series Weight CPU SE Model Approximate Sockets Depth Description RES 12XR3 19 5 Ibs 8 9 kg 2 20 Includes e All CPU sockets filled e 6 DIMMs RES 12XR3 S 17 7 7 kg 2 17 e 2 storage drives e 2 PCI cards e 1 CD RW DVD ROM drive RES 11XR3 16 5 Ibs 7 5 kg 1 17 e 2 power supplies RES 22XR3 25 Ibs 11 4 kg 2 20 Includes e All CPU sockets filled RES 22XR3 S 23 Ibs 10 4 kg 2 17 SiS e 2 storage drives e e 2 PCI cards RES 22XR3 FIO 25 3 Ibs 11 5 kg 2 16 E HE e 2 power supplies RES 21XR3 22 5 Ibs 10 2 kg 1 17 RES 32XR3 28 5 Ibs 12 9 kg 2 20 Includes e All CPU sockets filled RES 32XR3 S 26 5 Ibs 12 0 kg 2 17 SE Oe e 2 storage drives e e 2 PCI cards RES 32XR3 FIO 29 0 Ibs 13 2 kg 2 16 WE e 2 power supplies RES 31XR3 26 Ibs 11 8 kg 1 17 Themis Computer Installation Section Chapter Installation and Operation This chapter describes e How to install a memory module storage drive PCI card 120 mm fan power supply and lithium battery e Rack mount brackets e How to turn the RES 32XR3 Configuration 3 on and off 2 1 Installation Procedures Caution
80. iguration Use this feature to configure Advanced Configuration and Power Interface ACPI power management settings for your system 3 3 12 1 ACPI Aware O S Select Enabled to enable ACPI support if it is supported by the OS to control ACPI through the Operating System Otherwise disable this feature The options are YES default and No 3 3 12 2 ACPI Version Features The options are ACPI v1 0 ACPI v2 0 default and ACPI v3 0 Please refer to ACPI s website for further explanation http www acpi info 3 3 12 3 ACPI APIC Support Select Enabled to include the ACPI APIC Table Pointer in the RSDT Root System Description Table pointer list The options are Enabled default and Disabled 3 3 12 4 APIC ACPI SCI IRQ When this item is set to Enabled APIC ACPI SCI IRQ is supported by the system The options are Enabled and Disabled default 3 3 12 5 Headless Mode This feature is used to enable the system to function without a keyboard monitor or mouse attached The options are Enabled and Disabled default 3 3 12 6 NUMA Support Select Enabled to enable Non Uniform Memory Access support for an NUMA Aware OS to improve CPU performance Select Disabled to provide better memory access for a non NUMA OS Select NUMA for SLES 11 for better CPU perfor mance on a SUSE Linux Enterprise Server 11 The options are Enabled default Disabled and NUMA for SLES11 3 23 Themis Computer RES 32XR3 Installation Manual Confi
81. ime e No Access prevents User access to the Setup Utility Change User Password Select this feature and press lt Enter gt to access the submenu and then enter a new User Password Clear User Password Available only if User Pass word has been set This item allows you to clear a user password after it has been entered Password Check This item allows you to check a password after it has been entered The options are Setup default and Always Themis Computer 3 BIOS Setup Utility 3 9 Boot Configuration Use this feature to configure boot settings see Figure 3 4 BIOS SETUP UTILITY gt Boot Device Priority Figure 3 4 Boot Settings 3 5 1 Boot Device Priority This feature allows the user to specify the sequence of priority for the Boot Device The settings are 1st boot device 2nd boot device 3rd boot device 4th boot device 5th boot device and Disabled e Ist Boot Device Ist Floppy Drive e 2nd Boot Device USB XXXXXXXXX 3 5 2 Storage Drives This feature allows the user to specify the boot sequence from all available storage drives The settings are Disabled and a list of all storage drives that have been detected i e Let Drive 2nd Drive 3rd Drive etc 3 31 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 5 3 3 5 4 3 5 5 Removable Drives This feature allows the user to specify the boot sequence from available Removable
82. ing box bottom crush resistant layer and top crush resistant layer The bottom and top crush resistant layers are identical components placed so that the side with the plastic membrane is against the equipment Top Layer Membrane 8 ra i zz Figure F 1 Packaging Components F 2 Themis Computer F Repackaging Instructions F 3 Instructions for Repackaging Re assemble the packaging material about the equipment in accordance with the fol lowing instructions see Table F 2 on page F 3 e Inspect the original packaging materials for serviceability e Place one crush resistant layer open side down membrane side up in the bot tom of the box e Place the equipment on top of the bottom layer right side up e Place the other crush resistant layer membrane side down open side up on top of the equipment e Press down on the top layer to firmly compress the layers around the equip ment and allow for the box flaps to be closed e Seal the top of the box with strong packaging tape wrapping the tape com pletely around the box both lengthwise and crosswise e Prepare for shipment in accordance with the instructions received from Themis Computer ae 3 Figure F 2 Order of Assembly F 3 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 F 4 Themis Computer Index Numerics 1 44 MB 3 5 floppy drive 4 120 mm fan housing 2 19 rack xxi
83. is feature allows the user to monitor system health and review the status of each item as displayed CPU Overheat Alarm This option allows the user to select the CPU Overheat Alarm setting which deter mines when the CPU OH alarm will be activated to provide warning of possible CPU overheat Caution 1 Any temperature that exceeds the CPU threshold temperature pre defined by the CPU manufacturer may result in CPU overheat or system instability When the CPU temperature reaches this predefined threshold the CPU and system cooling fans will run at full speed 2 To avoid possible system overheating please be sure to provide adequate airflow to your system Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations The options are e The Early Alarm Select this setting if you want the CPU overheat alarm including the LED and the buzzer to be triggered as soon as the CPU temper ature reaches the CPU overheat threshold as predefined by the CPU manufac turer e The Default Alarm default Select this setting if you want the CPU overheat alarm including the LED and the buzzer to be triggered when the CPU tem perature reaches about 50C above the threshold temperature as predefined by the CPU manufacturer to give the CPU and system fans additional time needed for CPU and system cooling In both the alarms above please take immediate action as shown below 3 3 11 2 CPU1 Temperature CPU2 Temperature Syste
84. iscard all the changes and return to the AMI BIOS Utility Program Load Optimal Defaults To set this feature select Load Optimal Defaults from the Exit menu and press lt Enter gt Then select OK to allow the AMI BIOS to automatically load Optimal Defaults to the BIOS Settings The Optimal settings are designed for maximum sys tem performance but may not work best for all computer applications Load Fail Safe Defaults To set this feature select Load Fail Safe Defaults from the Exit menu and press lt Enter gt The Fail Safe settings are designed for maximum system stability but not for maximum performance Themis Computer 3 BIOS Setup Utility 3 7 BIOS Recovery A Caution Do not upgrade the BIOS unless your system has a BIOS related issue Flashing the wrong BIOS can cause irreparable damage to the system In no event shall Supermicro be liable for direct indirect special incidental or consequential damages arising from a BIOS update If you need to update the BIOS do not shut down or reset the system while the BIOS is updating This is to avoid possible boot failure 3 7 1 3 2 How to Recover the AMIBIOS Image the Main BIOS Block An AMIBIOS flash chip consists of a boot sector block and a main BIOS code block a main BIOS image The boot sector block contains critical BIOS code including memory detection and recovery code to be used to flash a new BIOS image if the original BIOS Image
85. isconnected from the power source Therefore the power cord and its connectors must always remain easily accessible e Do not set up the device in the proximity of heat sources or in a damp location Make sure the device has adequate ventilation e All connection cables must be screwed or locked to the chassis housing e The device is designed to be used in horizontal position only e The device is no longer safe to operate when the device has visible damage or the device no longer functions e In these cases the device must be shut down and secured against unintentional operation e Repairs may only be carried out by a person authorized by Themis Computer e The device may only be opened for the installation and removal of extension PCI cards memory modules storage drives fan housings power supplies Themis Computer RES 32XR3 Installation Manual Configuration 3 and the lithium battery all in accordance with the instructions given in this manual e If extensions are made to the device the legal stipulations and the device spec ifications must be observed e The device must be switched off when removing the top cover for example before installing extension PCI cards Operation of Laser Source Devices DVD CD ROM drives contain laser light emitting diodes classified in accordance with IEC 825 1 1993 LASER CLASS 1 and therefore must not be opened If the enclosure of such a drive is opened
86. it is very impor tant that the eguipment be shipped in the original packaging which provides ade guate protection against crushing and moisture invasion Failure to use original packaging materials exactly as described in this appendix may invalidate the war ranty If the original packaging is no longer serviceable or no longer available please contact Themis Customer Support for a new shipping box to send back your RES 32XR3 ensuring protection from damage in transit If it becomes necessary to ship in packaging other than that provided by Themis equipment should be wrapped in a moisture resistant covering and placed either in double boxes or in boxes with crush resistant insulation between the equipment and the outer walls of the container When using the original packaging the clear plastic membrane should be placed next to the equipment 1 e up against the bottom or down against the top The fol lowing instructions assume the original packing components are still available and in serviceable condition low the instructions of this Appendix F may invalidate the warranty Please con t Caution Failure to use the original Themis packaging materials and failure to fol tact Themis if new packaging materials are reguired Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 F 2 Packaging Components The original packaging components are shown in Figure F 1 page F 2 They com prise a packag
87. listed in Figure E 6 header J1 pinout signal descrip tions are described in Table E 3 Stereo Audio Out Jack Left Line Out Right Line Out USB to Audio Chip Header Line In Header 5 Volts USB DM Line Out Left Line In Left USB DP Line Out Right Line In Right X No Connection DM Data Minus DP Data Positive Figure E 6 Stereo Audio Connector Pinout Table E 3 Stereo Audio Out Connector Pinout Signal Descriptions J1 Pin Signal Name Pin Signal Name Pin Signal Name 1 No Connection 4 Data Minus 7 Ground 2 5 volts 5 No Connection 8 Ground 3 No Connection 6 Data Plus 9 No Connection E 6 Themis Computer E Optional RES Audio USB Serial Port Module E 2 Ordering the RES Audio USB Serial Port Custom Module Because internal modifications must be made to the RES chassis in order to support the RES Audio USB Serial Port Custom Module the Custom Module must be spec ified on the purchase order for your RES system Please contact Themis for further information regarding the RES Audio USB Serial Port Custom Module You can reach Themis on the web at www themis com or by calling 1 510 252 0870 E 7 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 E 8 Themis Computer Appendix Repackaging Instructions F 1 Repackaging for Shipment If it becomes necessary to return equipment to Themis Computer
88. ll width Intel QuickPath interconnect links up to 6 4 GT s of data transfer rate in each direction e Virtualization Technology Integrated Management Engine supported e Point to point cache coherent interconnect Fast narrow unidirectional links and Concurrent bi directional traffic e Error detection via CRC and Error correction via Link level retry Themis Computer 1 Overview and Specifications 1 4 1 4 1 Special Features Recovery from AC Power Loss BIOS provides a setting for you to determine how the system will respond when AC power is lost and then restored to the system You can choose for the system to remain powered off in which case you must press the power switch to turn it back on or for it to automatically return to a power on state See the Advanced BIOS Setup section to change this setting The default setting is Last State 1 5 1 5 1 1 5 2 PC Health Monitoring This section describes the PC health monitoring features of the RES 32XR3 Config uration 3 motherboards All have an onboard System Hardware Monitor chip that supports PC health monitoring An onboard voltage monitor will scan these onboard voltages continuously e CPU Cores 1 8V 3 3V 5V 12V 3 3V Standby 5V Standby VBAT HT Memory Chipset Voltages Once a voltage becomes unstable a warning is given or an error message is sent to the screen Users can adjust the voltage thresholds to define the sensitivity of the
89. llation and Operation Operation 2 3 3 Getting Started 2 3 3 1 Configuration 1 Make sure all storage drives are installed see SAS SATA II Storage Drive on page 2 9 Drive ID numbers are shown in Figure 1 3 on page 1 4 Chapter 1 Changes may be made through the BIOS 2 Make sure that a graphics card is installed in a PCI Express slot Configuration 3 motherboards have onboard graphics capability see Figure 2 5 on page 2 7 and connect a multiscan monitor to the SVGA or any other available connec tion type exist 3 Attach a PS 2 keyboard and mouse to the appropriate connectors on the rear I O panel of the RES 32XR3 Configuration 3 see Figure 1 5 on page 1 6 4 Turn the system on see previous section 2 3 3 2 Linux Installation The subject of installing the Linux operating system onto the RES 32XR3 is detailed in Appendix C Red Hat Enterprise Linux 5 Installation 2 3 4 Turning the System Off Caution Before turning your system off make sure to save all open files properly close applications and broadcast a warning to all users on any active networks 1 To turn the RES 32XR3 power off press and hold the system power on off button see Figure 2 15 page 2 16 for at least four 4 seconds This will shut down the system and turn off the POWER LED as well as the power supply module LED As an alternative a modern operating system Windows 9x or newer and Linux for example can turn off the
90. llations to perform close the RES 32XR3 chassis by refastening the top cover removed in Section 2 1 1 Remove Protective Top Cover on page 2 1 2 1 4 Lithium Battery 2 1 4 1 Removing the Lithium Battery Perform the following steps to remove the lithium battery 1 Make sure the system is powered off see Operation on page 2 16 2 Locate the lithium battery socket and squeeze the latch see A Figure 2 7 together until the battery lifts out of its socket 3 Remove the old battery and replace with a new battery see next section Battery Latch TNS NATE Me A To release squeeze battery latch together B and remove battery from socket Figure 2 7 The RES 32XR3 Configuration 3 Lithium Battery and Socket 2 8 Themis Computer 2 Installation and Operation Installation Procedures Note The battery location is dependent on which motherboard is in stalled in the chassis 2 1 4 2 Installing a Lithium Battery Perform the following steps to insert a new lithium battery 1 Tilt the replacement battery into the empty socket so that it is angled under the battery latch see B Figure 2 7 on page 2 8 2 Carefully press down on the battery until it clicks firmly into place 2 1 5 SAS SATA II Storage Drive Perform the following steps to remove and install a storage drive which may be either SAS or SATA II The front doors of the RES 32XR3 Configuration 3 must be unlocked and opened to access t
91. lly selected by the motherboard The options are Disabled default and Enabled Memory Frequency This feature forces a DDR3 frequency slower than what the system has detected The available options are Auto default Force DDR 800 Force DDR 1066 Force DDR 1333 Memory Mode The options are Independent default Channel Mirror and Lockstep Independent All DIMMs are available to the operating system e Channel Mirror The motherboard maintains two identical copies of all data in memory for redundancy Lockstep The motherboard uses two areas of memory to run the same set of operations in parallel Demand Scrubbing A memory error correction scheme where the Processor writes corrected data back into the memory block from where it was read by the Processor The options are Enabled and Disabled default Patrol Scrubbing A memory error correction scheme that works in the background looking for and correcting resident errors The options are Enabled default and Disabled Throttling Closed Loop Throttling improves reliability and reduces power in the processor by automatic voltage control during processor idle states Available options are Disabled and Enabled default Northbridge Configuration This feature allows the user to configure the settings for the Intel Northbridge chip 3 11 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 5 1 J 3 3 5 2 3 3 5 3
92. logic The wide range of functions integrated onto the Super I O greatly reduces the num ber of components reguired for interfacing with floppy disk drives The Super O supports 360K 720K 1 2M 1 44M or 2 88M disk drives and data transfer rates of 250 Kb s 500 Kb s or 1 Mb s It also provides two high speed 16550 compatible serial communication ports UARTs Each UART includes a 16 byte send receive FIFO a programmable baud rate generator complete modem control and a processor interrupt system Both UARTS provide legacy speed with baud rate of up to 115 2 Kbps and an advanced speed with baud rates of 250 K 500 K or 1 Mb s for higher speed modems The Super I O provides functions that comply with ACPI Advanced Configuration and Power Interface which includes support of legacy and ACPI power manage ment through an SMI or SCI function pin It also features auto power management to reduce power consumption Themis Computer 1 Overview and Specifications 1 8 1 8 1 Specifications General Table 1 6 lists general specifications for the RES 32XR3 Table 1 6 RES 32XR3 General Specifications Parameter Description Dimensions e 5 25 3RU high e 17 43 2 cm wide 19 rack mountable e 20 50 8 cm deep Weight e Under 42 pounds 19 kg includes 6 full length up to 12 25 PCl cards 1 CD RW DVD ROM drive 8 SAS SATA II storage drives and 2 power supplies e Add 8 8 pounds 4 k
93. longer term basis than that assigned by the DHCP mentioned in the other option The options are DHCP default and Static 3 3 17 IP Address Configuration This submenu displays the following IP Address Configuration information 3 3 17 1 Parameter Selector This item displays the parameter of your IP Address configuration 3 3 17 2 IP Address This item displays the IP address of this computer The value of each three digit number separated by dots should not exceed 255 Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations 3 3 17 3 Current IP Address in BMC This item displays the current IP address used for your IPMI connection 3 3 18 MAC Address Configuration This submenu displays the following MAC Address Configuration information 3 3 18 1 Parameter Selector Use this feature to select the parameter of your Mac Address configuration 3 3 18 2 MAC Address This item displays the MAC address of this computer MAC addresses are 6 two digit hexadecimal numbers Base 16 0 9 A B C D E F separated by dots Oe 00 30 48 D0 D4 60 The value of each three digit number separated by dots should not exceed 255 3 3 18 3 Current MAC Address in BMC This item displays the current MAC address used for your IPMI connection 3 3 19 Subnet Mask Configuration Subnet masks tell the network which subnet this machine belongs to The value of each three digit number separated by dots should not e
94. m LEDs are located on the front panel see A Figure 1 5 all T O connectors are located on the rear panel see B Figure 1 5 LEDs are described in Table 1 4 on page 1 8 I O connectors are described in Table 1 5 page 1 9 Front Panel Doors Removed LEDs i wen ENET2 W LW SD Dt P 0 Storage Power Power NIC1 NIC2 Overheat Power ON OFF Drives Fail Fail Fan Fail Button PS1 PS2 Left Power Right Power Supply Supply Rear Panel i gt lt gt TTT See gt A LR DR ERR mm b LELLI Gigabit Ethernet IPMI Dedicated LAN E A LAN 3 Port LAN 4 Port im I O Connectors _ ne PS 2 Mouse _ _ l ES SS PS 2 Keyboard USBI top COM 1 Port VGA Port SE SS ek 2 Port USBO bottom eh emg X8DT3 F X8DT3 LN4F only X8DT3 LN4F only Figure 1 5 RES 32XR3 Configuration 3 System LEDs and I O Connectors 1 6 Themis Computer 1 Overview and Specifications System LEDs and I O Connectors Table 1 3 Power Supply LED Behavior Symbol LED Power System LED Description Power Fail LED e f system is powered on e On Left Power Supply warns that the left power Ci red LED EE i supply has failed or has ote system is powered on lost AC input Power Fail LED e f system is powered on e On Right Power Supply warns that the right power Ca
95. m Temperature This feature displays current temperature readings for the CPU and the System The following items will be displayed for your reference only CPU Temperature The CPU thermal technology that reports absolute temperatures Celsius Fahrenheit has been upgraded to a more advanced feature by Intel in its newer processors The basic concept is each CPU is embedded by unique temperature information that the motherboard can read This Temperature Threshold or Temperature Tolerance has been assigned at the factory and is the baseline on which the motherboard takes action during different CPU temperature conditions De by increasing fan speed triggering the Overheat Alarm etc Since CPUs can have different Temperature Tolerances the installed CPU can now send information to the motherboard what its Temperature Tolerance is and not the other way around This results in better CPU thermal management Supermicro has leveraged this feature by assigning a temperature status to certain thermal conditions in the processor Low Medium and High This makes it easier for the user to understand the CPU s temperature status rather than by just simply seeing a temperature reading Oe 25 C The CPU Temperature feature will display the CPU temperature status as detected by the BIOS e Low This level is considered as the normal operating state The CPU tem perature is well below the CPU Temperature Tolerance
96. memory of all messages The options are OK default and Cancel 3 3 20 4 PCIE Error Log Select Yes to enable PCI Express error PERR logging The options are Yes default and No 3 28 S Themis Computer 3 BIOS Setup Utility 3 4 3 4 1 3 4 2 3 4 3 Security Settings The AMI BIOS provides a Supervisor and a User password If you use both pass words the Supervisor password must be set first Change Sayers tour Parsuord Figure 3 3 Security Settings Supervisor Password This item indicates if a Supervisor password has been entered for the system Not Installed means a Supervisor password has not been used User Password This item indicates if a user password has been entered for the system Not Installed means that a user password has not been used Change Supervisor Password Select this feature and press lt Enter gt to access the submenu and then enter a new Supervisor Password 3 29 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 4 4 3 4 5 3 4 6 3 4 7 User Access Level Available when Supervisor Password is set as above Use this feature to set the user s access level The options are e Full Access default grants full User read and write access to the Setup Util ity e View Only allows access to the Setup Utility but cannot change the fields e Limited allows only limited fields to be changed such as Date and T
97. mouse A R rack mount brackets 2 with handles 2 15 without handles 2 15 Rack Mount Slide Installation Full View B 3 rack mount slides xxiv 2 1 20 B 1 installation kit B 2 screw locations B 1 rack mount slides optional 2 5 rear panel 1 4 Rear Panel I O 1 2 Red Hat Enterprise Linux C Remote On Off Switch module D 1 configuration D 2 ordering D 2 Repackaging Instructions E Order of Assembly E 3 Index 4 RES x2XR3 20 Manual Matrix AC and DC Power Supplies xx RES x2XR3 Front I O 16 Manual Matrix AC and DC Power Supplies xxii RES x2XR3 Manual Matrix AC and DC Power Supplies xxi RES x2XR3S x1Xr3 17 Manual Matrix AC and DC Power Supplies xxi right rack mount bracket 2 5 ROM File Extraction Screen 3 38 S Safety Instructions iv Electrostatic Discharge ESD v Grounding Methods v Instructions for the Lithium Battery vi Operation of Laser Source Devices v screw locations for rack mount slides B Security Settings Screen 3 29 Serial Port D 3 Serial Port COM1 D 5 serial ports A 2 D 5 Shock 2 17 shock xxiv Shock endurance 2 Sidebars xxv slides rack mount xxiv slimline drive 7 2 Sound Baffle Installed front 1 17 rear 1 18 Southbridge 2 Specifications Themis Computer Index Altitude 7 15 BTU Rating 6 Dimensions 5 Electrostatic Discharge 1 17 Input Current 1 16 Input Frequency 1 16 Input Leakage 1 16 Input Power 6 Input VA Rating 1 16 Input Voltage 1 16 Maximum
98. nd Enabled default Hardware Prefetcher Available when supported by the CPU If set to Enabled the hardware prefetcher will prefetch streams of data and instruc tions from the main memory to the L2 cache in the forward or backward manner to improve CPU performance The options are Disabled and Enabled default 3 7 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 8 3 3 3 4 3 3 3 5 3 3 3 6 3 3 3 7 3 3 3 8 Adjacent Cache Line Prefetch Available when supported by the CPU The CPU prefetches the cache line for 64 bytes if this option is set to Disabled The CPU prefetches both cache lines for 128 bytes as comprised if Enabled default MPS and ACPI MADT Ordering This feature is used to configure the MPS Multi Processor Specifications and ACPI settings for the motherboard Select Modern Ordering if Windows XP or newer is used in the motherboard Select Legacy Ordering if Windows 2000 or older is used The options are Modern Ordering default and Legacy Ordering Max CPUID Value Limit This feature is used to set the maximum CPU ID value Enable this function to boot the legacy operating systems that cannot support processors with CPUID functions The options are Enabled and Disabled default for the Windows OS Intel Virtualization Technology Available when supported by the CPU Select Enabled to use the feature of Virtualization Technology to allow one platform to
99. nded that the terminal program be configured to use the CR LF style of line termina tion F 3 39 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 40 Themis Computer Appendix Connector Pinouts This appendix provides connector pinouts for all standard user I O interfaces on the RES 32XR3 Configuration 3 A 1 PS 2 Keyboard and Mouse The RES 32XR3 Configuration 3 provides a 6 pin female mini DIN connector for the PS 2 keyboard and another for the PS 2 mouse Signals for both connectors are defined in Table A 1 Table A 1 PS 2 Keyboard Mouse Pinout and Signal Descriptions Pin Signal Name 1 Keyboard mouse data 2 N C 5 6 3 Ground 3 4 4 Vcc gt z 5 Keyboard mouse clock 6 N C A 1 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 A 2 USB Ports The RES 32XR3 supports two USB Universal Serial Bus port connectors see Figure A 1 for a connector pinout USB 0 and USB 1 on the rear I O panel Pinout descriptions are listed in Table A 2 Figure A 1 USB Connector Pinout Table A 2 USB Connector Pinout Signal Descriptions Pin Signal Name Pin Signal Name 1 5V 3 PO 2 PO 4 GND A 3 Serial Port The RES 32XR3 supports one male DB9 serial port connector on the rear I O panel see Figure A 2 TTYA COM1 COM 1 pinout signal description
100. new connection Themis Computer 3 BIOS Setup Utility BIOS Recovery Use the following communication parameters for the new connection e Bits per second 115200 bits sec Data Bits 8 e Parity None e Stop Bit 1 e Flow Control None 4 When BIOS flashing is completed the computer will reboot Do not interrupt the flashing process until it is completed EE Press lt SpaceBar gt to update BIOS EE Confirm update BIOS y n y haris tas ela dE ER Begin remote BIOS flash y n y EE Starting remote flash eye daar A Upload new BIOS file using Xmodem protocol 5 Following the instructions given on the screen to update the BIOS These instructions are also shown below a At the prompt press the lt SpaceBar gt to update the BIOS b When asked to confirm BIOS updating press lt y gt to confirm BIOS up dates c Press lt y gt again to begin flashing BIOS remotely Note Be sure to complete Steps a to c above quickly because you have a second or less to do so 6 Once you ve completed the instructions given a screen will display to indicate that remote flashing is starting and the new BIOS file is being uploaded 7 To use Hyper Terminal to transfer the XModem protocol by using the Send File dialog under the Transfer menu follow the instructions below to com plete XModem transfers 3 37 Themis Computer RES 32XR3 Installation
101. nt Interface IPMI is a set of common interfaces that IT administrators can use to monitor system health and to manage the system as a whole For more information on the IPMI specifications please visit Intel s website at www intel com Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations 3 3 14 1 Status of BMC Baseboard Management Controller BMC manages the interface between system management software and platform hardware This is an informational feature which returns the status code of the BMC micro controller 3 3 14 2 IPMI Firmware Revision This item displays the IPMI Firmware Revision Number currently used in this sys tem 3 3 15 View BMC System Event Log This feature displays the BMC System Event Log SEL It shows the total number of entries of BMC System Events To view an event select an Entry Number and pressing lt Enter gt to display the infor mation as shown in the screen e SEL Entry Number e SEL Record ID e SEL Record Type e Event Timestamp e Generator ID e Event Message Format Version e Event Sensor Type e Event Sensor Number e Event Dir Type e Event Data 3 3 15 1 Clear BMC System Event Log Select OK and press the lt Enter gt key to clear the BMC system log Select Cancel to keep the BMC System log The options are OK default and Cancel Caution Any cleared information is unrecoverable Make absolutely sure that you no longer need any data stored in
102. o Auto the AMI BIOS will automatically set the limit on the C State package register The options are Auto default C1 C3 C6 C7 3 3 3 17 C1 Auto Demotion When this item is set to enabled the CPU will conditionally demote C3 C6 or C7 requests to C1 based on un core auto demote information The options are Disabled and Enabled default 3 3 3 18 C3 Auto Demotion When this item is set to enabled the CPU will conditionally demote C6 or C7 requests to C3 based on un core auto demote information The options are Disabled and Enabled default 3 3 3 19 Clock Spread Spectrum Select Enable to use the feature of Clock Spectrum which will allow the BIOS to monitor and attempt to reduce the level of Electromagnetic Interference caused by the components whenever needed The options are Disabled default and Enabled 3 3 4 Advanced Chipset Control The items included in the Advanced Settings submenu are listed below CPU Bridge Configuration 3 3 4 1 QPI Links Speed This feature selects QPI s data transfer speed The options are Slow mode and Full Speed default 3 3 4 2 QPI Frequency This selects the desired QPI frequency The options are Auto default 4 800 GT 5 866GT 6 400 GT Themis Computer 3 BIOS Setup Utility 3 3 4 3 3 3 4 4 3 3 4 5 3 3 4 6 3 3 4 7 3 3 4 8 3 3 5 Advanced Setup Configurations QPI LOs and L1 This enables the QPI power state to low power LOs and L1 are automatica
103. ol over your system see Figure C 15 on page C 15 C 14 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 The root account Is used for administering the system Enter a password for the root user Root Password eeeees Confirm sessses gt Retease Notes Back gt Next BC Figure C 15 Setting Up Root Account and Password Click Next Step 16 Now that you have made most of the choices for your installation you are ready to confirm the default package selection or customize packages for your sys tem The Package Installation Defaults screen appears and details the default package set for your Red Hat Enterprise Linux installation This screen varies depending on the version of Red Hat Enterprise Linux you are installing see Figure C 16 on page C 16 To customize your package set further select the Customize now option on the screen Clicking Next takes you to the Package Group Selection screen You can select package groups which group components together according to func tion for example X Window System and Editors individual packages or a com bination of the two C 15 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 To select a component click on the checkbox beside it RED HAT ENTERPRISE LINUX 5 The default installation of Red Hat Enterprise Linux Server includes a set of so
104. oles see Figure B 1 Mounting Bracket 424 9 24 9 Legend Screw Hole Size 8 32 Note All dimensions are given in millimeters mm and measured from the baseline 0 of the drawing Figure B 1 Screw Locations for Rack Mount Slides B 1 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 B 2 Dimensions of the screw hole patterns on the sides of the RES 32XR3 chassis for installing rack mount slides are shown in Figure B 1 Caution Any screws used to mount a slide to a RES 32 chassis must not exceed a length of 3 8 to prevent excessive penetration of the chassis The rack mount slide installation kit includes the following items a Two inside slide sections b Two outside slide sections c Two front short slide brackets d Two rear long slide brackets e Assorted screws washers and nuts Follow these steps to install a steel rack mount slide to the RES 32XR3 chassis 1 Attach the inside slide section see Figure B 2 on page B 3 to both sides of the RES 32XR3 chassis using four 8 32 screws per side 2 Measure the depth of the 19 equipment rack into which the RES 32XR3 sys tem will be installed this can vary from 24 to 30 3 Using the depth of the equipment rack adjust and attach the front and rear slide brackets to the outside slide section using the screws washers and nuts provided with the slide kit 4 With all slide brackets s
105. ork is one pound 0 5 kg Therefore both the shipping container and a typical RES 32XR3 Configuration 3 including power cords manual and associated paperwork weigh approximately 38 3 pounds 17 4 kg Caution Do not discard the original packaging that your system was shipped in The original packaging was designed specifically to withstand the stress and rigors of today s shipping environment It will be needed in the event the system must be shipped back to Themis Computer See Appendix F Repackaging for Shipment 1 9 1 Accessory Kit Each RES 32XR3 Configuration 3 is packaged with an Accessory Kit consisting of the following items A Two AC Power Cords B Two Storage Drive Barrel Keys When you unpack the RES 32XR3 Configuration 3 please verify that all of these items are included If any of these items are missing or not as pictured please call Themis Technical Support at 510 252 0870 or send an email to support the mis com To learn how to secure the AC power cords and the power cord retainer bracket refer to Section 2 3 1 Plugging in the AC Power Cords on page 2 16 1 19 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 20 1 9 2 Rack Mount Slides Optional Rack Mount Slides can be mounted on each side of the RES 32XR3 Configuration 3 for the purpose of sliding the unit in and out of a rack Mounting sl
106. ot Device PONI seyis ecjes enee dE eg 3 31 549 25 MOTA SE MAN ES eege 3 31 33 3 Removable DIVES ele 3 32 3 3 4 EAR AEN Ee 3 32 3 99 e 3 32 3 0 ERIK OPUONS cenn heeii ia a E a E A E A E ES 3 33 36 1 Sav Changes WE EE 3 33 3 6 2 Discard Changes and Exit sakala th aste 3 33 3 6 3 Discard Changes s cisscctsvascadvssiseccanapvacsracsdcaiascssaasa na nans 3 34 3 04 Coad Eegeregie 3 34 xii Themis Computer Table of Contents 3 6 5 oad F il Safe Defaults ssis hakanu ravita matata 3 34 et BIOS Recovery M UA SI IS RG 3 35 3 7 1 How to Recover the AMIBIOS Image the Main BIOS Block 3 35 3 7 2 Boot Sector Recovery from a USB Device AAA 3 35 3 7 3 Boot Sector Recovery from an IDE CD ROM A 3 36 3 7 4 Boot Sector Recovery from a Serial Port Serial Flash 3 36 Appendix A Connector Pinouts 3 saaksid A 1 AT PS2 Keyboard and Mouse moreris ied cade Ques E A N R A 1 PD USB e EE A 2 A3 NOELIA POTG kalasadama patja A 2 AA AVOA MOIO POM a sess ayes aes een coop Sa ae cede a Nace tee oy a A 3 A 5 Gigabit Ethernet LAN Ports masendab sateen A 4 A 6 IPMI Dedicated LAN Port ssssssoseeseeseeesseesseeesesessseessresseesseessesessseeseesseeeseressseesseese A 4 Appendix B Rack Mount Slide Installatpon B 1 Appendix C Red Hat Enterprise Linux 5 Installation 0 000000eeoeseesseesseeseeseesseeseee C 1 Gl Introd cti i EE C 1 C 2 EE DEE EE EE C 1 Appendix D Optional Remote On Off Switch
107. p Configurations x uc dase ai navaa aken naket v nkuv ok Ainar Joa UE Ka 3 5 331 REI 3 5 3 31 OUK BOO EE 3 5 BBM SOUL BOO EE 3 5 3 3 1 3 AddOn ROM Display Mode uk 3 6 9434104 Bootupe Nam oes kiita shui eaka ia ema aal 3 6 3 3 1 5 Wait Bor RU If Error egene Dee EeEuueEN 3 6 3 3 1 6 Hit Del Message Display s ciccssisecceccasviccsenasvccsctesetcacenseccacaesessees 3 6 334101 Or VO Captre ee 3 6 3 3 2 Power Configuration essuee guten SEENEN ENNEN 3 6 3 3 2 1 Power Button Function sie kor saanehsvitedavaukodisesag ksendeedtara kokad ke 3 6 3 3 2 2 Restore on AC E 3 7 SE de ENER Ern 3 7 3 3 3 Processor and Clock Options 3 csscciss ccssdasisensscatesteoaaavassbacdessacad eu depodave kotkad ke 3 7 3 3 30 Ratio CMOS Setting ais iscciccssaccasasvaccads tecessceaveraceestsenbeaseacsateseveanas 3 7 Steet EE 3 7 5 3 5 5 Hardware EE 3 7 3 3 3 4 Adjacent Cache Line Prefetch ie holst ates dete kavva sild taeatuasaiee hes tens 3 8 3 3 3 5 MES and ACPI MADT Ordering 5 kit sepik atavada s tete kka 3 8 3 33 06 Max CPUID Value Limit suka Maa ad 3 8 3 3 3 7 Intel Virtualization Technology 3 8 3 3 3 8 Execute Disable Bit Capability m iemeeeenmeevenneeenneeee 3 8 38 94 Mintel AES N E 3 9 3 3 3 10 Simultaneous Multi Threading 0 eee eceeeeeesseceesseeeenteeeenaees 3 9 3 3 3 L1 Activ PFOCESSOF TEE 3 9 3 29 12 Ile EITM Technology n ee 3 9 Stee Mtel Turbo ROOSE ebe 3 9 3 3 3 14 Performance Watt
108. r computer s normal power up sequence has completed the graphical boot loader prompt appears at which you can do any of the following things e Press Enter causes the default boot entry to be booted e Select a boot label followed by Enter causes the boot loader to boot the operat ing system corresponding to the boot label e Do nothing after the boot loader s timeout period by default five seconds the boot loader automatically boots the default boot entry Do whatever is appropriate to boot Red Hat Enterprise Linux One or more screens of messages should scroll by Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Step 21 Eventually a login prompt or a GUI login screen if you installed the X Window System and chose to start X automatically appears see Figure C 21 RED HAT ENTERPRISE LINUX 5 Username Language star Shut Down Figure C 21 Login Screen Step 22 Once logged in you are ready to use the desktop see Figure C 22 OB Applications Places System CH 2 45PM B Lo Figure C 22 Ready to use the Desktop C 20 Themis Computer Appendix Optional Remote On Off Switch D 1 Remote On Off Configuration Customers interested in installing an optional switch from which to remotely turn the RES 32XR3 Configuration 3 on or off are able to order a Remote On Off Switch module that is easily installed in an available storage drive bay see Fi
109. rades 3 26 el Chane tree ee Ee 3 26 DOS VP EE Eeer 3 26 S317 AP Address Com Sur atom eege t enger eegen Dear kka kastike 3 26 xi Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 HS LTA Parameter Selector EE 3 26 33 172 AP EE aise Ges ege sund Polski eegen laus Simak ans 3 26 3 3 17 3 Current IP Address Ee ee 3 27 3 3 18 MAC Address Configuration ek 3 27 Solel Parameter Selector usinust AN 3 27 Ee 3 27 3 3 18 3 Current MAC Address in BMC A 3 27 3 3 19 Subnet Mask Configuration ys 5 cicccsscasessetds aada janika ha aia ad 3 27 DD MW Parameter el pa a i a 3 27 3 21 9 2 OUTIL MASK saya et A ska i pall ae 3 27 3 3 19 3 Current Subnet Mask in the BMC A 3 27 3 3 19 4 Gateway AAATESS eege eege ege Eeer 3 28 3 39 19 5 Ee 3 28 3 3 20 Event Log Configuration sustujs vidvsvadis dagdceasdsecdaves vaata ia amp ENER coors 3 28 3 3 20 1 View Event LOE ane lamavast lukas sala koka 3 28 3 3 20 2 Mark all events as read ulmest smo 3 28 3 3 20 3 Clear event EE 3 28 3 3204 PCIE Error EE 3 28 JA Securty Sel mast ena a mammu mmm im massis 3 29 3 4 1 Supervisor Password iiimssteviuvavatattuiva tunaajaedasv jaenvagaee EECH 3 29 42 User PassWord EE 3 29 3 4 3 Change Supervisor Password BEE 3 29 SAA User Access Level v eicisissasscivvsavelsiscgeadeassasniea e a aE E aa Eai s 3 30 343 Change User PassWord E 3 30 5 10 WC lear User PassWord EE 3 30 3 4 7 Password Check EE 3 30 DD EE EE 3 31 2941 Bo
110. ral components are welded together enabling the system to survive a maximum 3 axis shock load of 35G at 25 ms duration Electrostatic Discharge The RES 32XR3 is designed to tolerate electrostatic pulses up to 15 kilovolts KV with no impact on system operation Noise The RES 32XR3 conforms to the 54 db noise specification It is possible to achieve further noise reduction by installing a sound baffle muffler on both the front and rear of the RES 32XR3 chassis Figure 1 6 and Figure 1 7 on page 1 18 show the front and rear baffles respectively for a RES 22XR3 system Call your Themis rep resentative for additional information Figure 1 6 RES 22XR3 with Front Sound Baffle Installed Front View Note All RES systems are shipped with BIOS fan speed set to the quietest mode The default fan speed control mode of the RES 32XR3 Configuration 3 is Energy Saving ES Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Front Access Opening the two front doors of the RES 32XR3 Configuration 3 requires removing the front sound baffle To do this loosen the two 2 captive knurled Phillips screws holding the baffle to the chassis see A Figure 1 6 on page 1 17 and remove the baffle Rear Sound Baffle Rear Right Side lt B Rear Left Side B gt gt B gt gt Figure 1 7 RES 22XR3 with Rear Sound Baffle Installed Rear View Rear Access Accessing the I O connectors and P
111. rature will be displayed in degrees in Celsius and Fahrenheit as it is detected by the BIOS 3 3 11 4 Voltage Monitoring CPU1 Vcore CPU2 Vcore CPU1 DIMM CPU2 DIMM 1 5V 3 3Vcc V 3 3V SB V 12V 5V and Battery Voltage 3 3 11 5 Fan Speed Control Modes This feature allows the user to decide how the system controls the speeds of the onboard fans The CPU temperature and the fan speed are correlative When the CPU on die temperature increases the fan speed will also increase and vice versa Select Full Speed FS to allow the onboard fans to run at full speed for maximum cooling The FS setting is recommended for special system configuration or debug ging Select Performance PF for better system cooling The PF setting is recom mended for high power consuming and high density systems Select Balanced BL for the onboard fans to run at a speed that will balance the needs between system cooling and power saving The BL setting is recommended for regular systems with normal hardware configurations Select Energy Saving ES for best power effi ciency and maximum quietness The Options are Full Speed FS Performance PF Balanced BL and Energy Saving ES default Themis Computer 3 BIOS Setup Utility Advanced Setup Configurations 3 3 11 6 Fani Fan 8 Reading This feature displays the fan speed readings from fan interfaces Fan through Fan8 Fan7 is CPU1 Fan and Fan8 is CPU2 Fan 3 3 12 ACPI Conf
112. ready starts another operating system loader such as System Commander The MBR is a special area on your hard drive that is automatically loaded by your computer s BIOS and is the earliest point at which the boot loader can take control of the boot process If you install it in the MBR when your machine boots GRUB presents a boot prompt You can then boot Red Hat Enterprise Linux or any other operating system that you have configured the boot loader to boot see Figure C 11 on page C 11 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation The first sector of your boot partition This is recommended if you are already using another boot loader on your system In this case your other boot loader takes control first You can then configure that boot loader to start GRUB which then boots Red Hat Enterprise Linux install Boot Loader record on dev nda Master Boot Record MER Sev NGal Hest sector Of BOOL partition Charge Drive Order Force LBA32 not normally required IF You ws to a omtault options to the boot command enter them into De General kere parameters mo General heme parameters D Netease Notes Back gt Host Figure C 11 Master Boot Record MBR If your system only uses Red Hat Enterprise Linux you should choose the MBR Click the Change Drive Order button if you would like to rearrange the drive order or if your BIOS does not return the correct drive order Changing the
113. result in increased CPU performance The options are Disabled and Enabled default 3 3 3 11 Active Processor Cores Set to Enabled to use a processor s Second Core and beyond Please refer to Intel s web site for more information The options are All default 1 and 2 3 3 3 12 Intel EIST Technology EIST Enhanced Intel SpeedStep Technology allows the system to automatically adjust processor voltage and core frequency in an effort to reduce power consump tion and heat dissipation Please refer to Intel s web site for detailed information The options are Disable Disable GV3 and Enable Enable GV3 default 3 3 3 13 Intel Turbo Boost Select Enabled to use the Turbo Mode to boost system performance The options are Enabled default and Disabled 3 3 3 14 Performance Watt Select Select Power Optimized to use the Turbo Boost mode after the system has been in the PO state for more than 2 seconds Select Traditional to use the Turbo Boost mode when the system has been in the PO state less than 2 seconds The options are Power Optimized and Traditional default 3 3 3 15 Intel C STATE Tech If enabled C State is set by the system automatically to either C2 C3 or C4 state The options are Disabled and Enabled default 3 9 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 3 16 C State package Limit Setting Available when C State support is enabled If this option is set t
114. rial port used for Console Redirection Serial Port Mode This feature allows the user to set the serial port mode for Console Redirection The options are 115200 8 n 1 default 57600 8 n 1 38400 8 n 1 19200 8 n 1 and 9600 8 n 1 Flow Control This feature allows the user to set the flow control for Console Redirection The options are None default Hardware and Software 3 19 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 11 3 3 11 1 Redirection After BIOS POST Select Disabled to turn off Console Redirection after Power On Self Test POST Select Always to keep Console Redirection active all the time after POST Note This setting may not be supported by some operating systems Select Boot Loader to keep Console Redirection active during POST and Boot Loader The options are Disabled Boot Loader and Always default Terminal Type This feature allows the user to select the target terminal type for Console Redirec tion The options are ANSI default VT100 and VT UTF8 VT UTF8 Combo Key Support Select Enabled to use VI UTF8 Combo as the keyboard type to send commands from a remote console The options are Enabled default and Disabled Sredir Memory Display Delay This feature defines the length of time in seconds to display memory information The options are No Delay default Delay 1 Sec Delay 2 Sec and Delay 4 Sec System Health Configuration Th
115. rive performance by increasing the amount of data transferred Only 512 bytes of data can be transferred per interrupt if Block Mode is not used Block Mode allows transfers of up to 64 KB per interrupt Select Disabled to allow data to be transferred from and to the device one sector at a time Select Auto to allow data transfer from and to the device occur multiple sectors at a time if the device supports it The options are Auto default and Disabled PIO Mode The IDE PIO Programmable I O Mode programs timing cycles between the IDE drive and the programmable IDE controller As the PIO mode increases the cycle time decreases The options are Auto default 0 1 2 3 and 4 Select Auto to allow the AMI BIOS to automatically detect the PIO mode Use this value if the IDE storage drive support cannot be determined Select 0 4 to allow the AMI BIOS to use PIO mode 0 4 It has a data transfer rate of 3 3MB s 16 6MB s See Below Table 3 1 PIO Mode Select Options Option Selected PIO Mode Max Transfer Rate 0 PIO Mode 0 3 3 MB s 1 PIO Mode 1 5 2 MB s 2 PIO Mode 2 8 3 MB s 3 PIO Mode 3 11 1 MB s 4 PIO Mode 4 16 6 MB s Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 16 DMA Mode Select Auto to allow the BIOS to automatically detect IDE DMA mode when the IDE storage drive support cannot be determined The options are Auto SWDMAn MWDM An and UDMAn See
116. rtitioning C 7 Power On C 2 Ready to use the Desktop C 20 Reviewing Option C 8 Selecting Layout Type C 5 Selecting Time Zone C 14 Setting Up Boot Loader C 0 Setting Up Root Account and Password C 15 Skip Key C 2 Welcome Screen C 3 Linux Installation Guide C lithium battery 2 installation 2 9 lithium battery and socket illustration of 2 8 removal 2 8 M Main BIOS Setup Screen 3 3 Major Components of the RES 32XR3 1 5 Manual Part Number ii memory 1 2 memory modules ECC SDRAM 2 4 N Noise Level 7 noise reduction 7 noise specification 7 17 Notes xxv O Opening the RES 32XR3 Front Doors 2 10 Operating temperature 2 Output Voltage 1 16 Overheat LED 1 8 P Packaging and Shipping 19 Packaging Components E 2 PCI cards 2 2 7 Index 3 Themis Computer RES 32XR3 Installation Manual Version 1 2 Peripheral Support 2 Packaging Components E 2 pinouts Re assembling E 3 Gigabit Ethernet LAN A 4 Shipping EI serial ports A 2 D 5 RES B 3 USB port A 2 RES Audio USB Serial Port Custom Module D Plugging in and Securing the AC Power 1 Cords 2 16 RES 32XR3 II power RES 32XR3 SVGA Connector Pin Signals A 3 button 4 reset switch 1 4 button and LED 2 16 cord sockets 1 4 LED 2 17 power cords 2 16 power supply 2 2 1 installation 2 14 locking mechanism 2 13 Power Supply Module 7 PSM LED Off 1 7 PSM LED On 12 7 processor 2 protective cover chassis 2 7 PS 2 keyboard A PS 2
117. s 1 Loosen and remove the seven screws securing the air flow deflector in the fol lowing manner see Figure 2 2 e Screw A After removing Screw A remove the PCI card retainer bracket and store in a safe place e Screw B The screw marked B in Figure 2 2 is recessed Remove it with a long shank magnetic Phillips screwdriver PCI Card Retainer Bracket Figure 2 2 Remove Air Flow Deflector Screws 2 4 Themis Computer 2 Installation and Operation Installation Procedures e Screw C Remove the five screws marked C in Figure 2 2 on page 2 4 which will loosen the air flow diverter so that it can be removed from the system After the air flow diverter has been removed the memory module slots will be exposed see Figure 2 3 CPU 2 Socket IN II i MMM TI a mA S E ont 2 wl mune GI I E Branch 0 lt P2 DIMM 1A WE STITT L ii P2 DIMM 2B e Branch 1 lt P2 DIMM 2A P2 DIMM 3B Branch 2 lt o e SIb WWW P2 DIMM 3A 2 ae RAA E o fil K gt P1 DIMM 1B db Branch 0 lt gE fh DI Tun ra CPU 1 Socket P1 DIMM 1A JAAVA e P1 DIMM 2B bE i Branch 1 lt ji P1 DIMM 2A i P1 DIMM 3B Branch 2 lt VETTE SR P1 DIMM 3A E en a TTTTTE Figure 2 3 Memory Module Slot Locations 2 If a module is already seated in the slot you have selected for installation remove it by gently pressing down and outward on the latches at both ends of the slot see Figure 2 4 on page 2 6 th
118. s are listed in Table A 3 1 5 GG 6 9 Figure A 2 COM1 Serial Connector Pinout Table A 3 COM1 Serial Connector Pinout Signal Descriptions Pin Signal Name Pin Signal Name Pin Signal Name 1 DCD 4 DTR 7 RTS 2 RXD 5 GND 8 CTS TXD 6 DSR 9 RI A 2 Themis Computer A Connector Pinouts A 4 SVGA Monitor Port A Super VGA connector is installed on the RES 32XR3 Configuration 3 on the rear T O panel A pinout for this connector is given in Figure A 3 and connector pin sig nals are described in Table A 4 Symbol LI SVGA Display Port 10 5 6 1 gt EH 15 11 Figure A 3 RES 32XR3 SVGA Connector Pinout Table A 4 RES 32XR3 SVGA Connector Pin Signals Pin VGA Signal Description Pin VGA Signal Description 1 RED OUT Red signal output 9 VCC Filtered Vcc voltage source 2 GREEN OUT Green signal output 10 GND Ground 3 BLUE OUT Blue signal output 11 NC No connection 4 NC No connection 12 SDA Display Data Channel Data 5 GND Ground 13 HSYNC Horizontal synchronization 6 GND Ground 14 VSYNC Vertical synchronization 7 GND Ground 15 SCL Display Data Channel Clock 8 GND Ground Themis Computer A 3 RES 32XR3 Installation Manual Configuration 3 Version 1 2 A 5 Gigabit Ethernet LAN Ports The RES 32XR3 supports four RJ45 Gigabit Ethernet LAN port connectors LAN 1 LAN 2 LAN 3 and
119. s titan casncacteiiad ea seelduecganacscebiatensbogedeceliaiues 1 7 Themis Computer xvii RES 32XR3 Installation Manual Configuration 3 Table 1 4 System Be el Denne nue et anon RE ne ee Pe OA al 1 8 Table 1 5 I O COnneelOrs iG aatatel nO ses eege 1 9 Table 1 6 RES 32XR3 General Specifications et sis ssadaivectus sede suacseedsncsbenetiondatventncdadeens 1 15 Table 1 7 RES 32XR3 Electrical Specifications 0 eceeseceesseceessceeesteceeseeeeseeeeaees 1 16 Table 1 8 Approximate Weights of the RES Series eescssseesseeeeeceeeeesoeeeeseeeneees 1 20 Table 2 1 RES 32XR3 Configuration 3 Memory Capacity ss sseeesseeseesseeessseesseessersse 2 3 Table 2 2 RES 32XR3 Configuration 3 Memory Populapon 2 3 Table 3 1 PIO M de Select GQ PADAS saaksid 3 15 Table 3 2 DMA Mode Select Options irstsivvsr tv tagav vaas vait kvkv EENS de 3 16 Table A 1 PS 2 Keyboard Mouse Pinout and Signal Descriptions sssssssssesesssessseesses A 1 Table A 2 USB Connector Pinout Signal Descrptons A 2 Table A 3 COMI Serial Connector Pinout Signal Descpttons A 2 Table A 4 RES 32XR3 SVGA Connector Pin Signals 0 00 eeeceesecceesseceeeteeeeseeeeseees A 3 Table A 5 RJ45 Ethernet Pinout Signals saialille aa A 4 Table E 1 Dual USB Connector Pinout Signal Descriptions J10 eee eeeeeeeeteeees D 4 Table E 2 COM1 Serial Connector Pinout Signal Descriptions J8 and J9 D 5 Table E 3 Stereo Audio Out Connector Pinout Signal De
120. scriptions J1 D 6 xviii Themis Computer Version 1 2 Preface This document entitled RES 32XR3 Installation Manual Configuration 3 pro vides instructions on how to install configure power up and boot the Themis Rug ged Enterprise Server RES 32XR3 Configuration 3 see Figure 1 below which is based on two 64 bit Intel 5500 Series Xeon Quad Dual Core CPUs or two Intel 5600 Series Xeon Quad Six Core CPUs RES 32XR3 Configuration 3 supports one of three motherboards in a 20 chassis e SuperMicro X8DT3 e SuperMicro X8DT3 F e SuperMicro X8DT3 LN4F a matrix describing 20 chassis configurations is given in Table 1 page xx A matrix describing 17 chassis configurations is given in Table 2 on page xxi UU ULI JAAAUAAAJANUANANUNA i LUUT LL Figure 1 Rugged Enterprise Server RES 32XR3 Configuration 3 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 Table 1 RES x2XR3 20 Deep Chassis Manual Matrix AC and DC Power Supplies CPU RES 32XR3 RES 22XR3 e RES 12XR3 Category Motherboard Soc Manual Manual Manual Manual kets Part Number Part Number Part Number Part Number Configuration 1 PARIET 2 116790 024 116789 024 A X8DTH 6F X8DTi Configuration 2 X8DTi F 2 117022 024 117017 024 X8DTi LN4F X8DT3 Configuration 3 X8DT3 F 2 117023 024 117018 024 X8DT3 L
121. system after a graceful OS software shutdown Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 18 Themis Computer Installation Section Chapter BIOS Setup Utility 3 1 3 1 1 Introduction This chapter describes the AMI BIOS Setup Utility for the RES 32XR3 mother boards The AMI ROM BIOS is stored in a Flash EEPROM and can be easily updated This chapter describes the basic navigation of the AMI BIOS Setup Utility setup screens Starting BIOS Setup Utility To enter the AMI BIOS Setup Utility screens press the lt Delete gt key while the sys tem is booting up Note In most cases the lt Delete gt key is used to invoke the AMI BIOS setup screen There are a few cases when other keys are used such as lt F1 gt lt F2 gt etc Each main BIOS menu option is described in this manual The Main BIOS setup menu screen has two main frames The left frame displays all the options that can be configured Grayed out options cannot be configured Options in blue can be config ured by the user The right frame displays the key legend Above the key legend is an area reserved for a text message When an option is selected in the left frame it is highlighted in white Often a text message will accompany it 3 1 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 J 3 1 2 3 1 3 Note The AMI BIOS has default text messages built in
122. tands for Advanced Configuration and Power Interface The ACPI specifica tion defines a flexible and abstract hardware interface that provides a standard way to integrate power management features throughout a PC system including its hard ware operating system and application software This enables the system to auto matically turn on and off peripherals such as CD ROMs network cards hard disk drives and printers In addition to enabling operating system directed power management ACPI pro vides a generic system event mechanism for Plug and Play and an operating system independent interface for configuration control ACPI leverages the Plug and Play BIOS data structures while providing a processor architecture independent imple mentation that is compatible with Windows 7 XP 2003 2008 Vista Operating Sys tems Slow Blinking LED for Suspend State Indicator When the CPU goes into a suspend state the chassis power LED will start blinking to indicate that the CPU is in suspend mode When the user presses any key the CPU will wake up and the LED will automatically stop blinking and remain on Themis Computer 1 Overview and Specifications 1 6 2 1 6 3 ACPI Features Main Switch Override Mechanism When an ATX power supply is used the power button can function as a system sus pend button to make the system enter a SoftOff state The monitor will be suspended and the hard drive will spin down Pressing the power button
123. ting and removing connectors or test equipment 6 Keep the work area free of non conductive materials such as ordinary plastic as sembly aids and Styrofoam 7 Use field service tools such as cutters screwdrivers and vacuums that are con ductive 8 Always place drives and boards PCB assembly side down on the foam Instructions for the Lithium Battery Systems are equipped with a lithium battery installed on the motherboard To replace this battery please observe the instructions that are described in this man ual Warning There is a danger of explosion when the wrong type of battery is used as a replacement vi Themis Computer Table of Contents Safety Instr ctions eege ege saak maaalad iv Pr face eege eege ea ee kaeti aa X1X 1 Overview and Specifications cccccccesscecsssceessscessseceesececsseceeseeeeseeessnsesesseeeenas 1 1 Jal e EE 1 1 1 2 System LEDs and I O Connectors ka Baers Ate acne eee eae er 1 6 1 3 ACHipSEt Overview arseen eg dee Ee enee 1 10 1 3 1 The 5500 5600 Series CPU and the 5520 Chipset s nsssssssessesesseesees 1 10 1 4 Special GE 1 11 1 4 1 Recovery from AC Power Loss EE 1 11 1 5 PC Eieerhtarc ME Ee eege 1 11 1 5 1 Fan Status Monitor with Firmware Control ccccsssessecececeeeeserersees 1 11 1 5 2 Environmental Temperature Control ssssssesseseesseesssessessseesseessseressessee 1 11 1 5 3 System Resource EE 1 12 E KE RER 1 12 1 6
124. tion of both SATA and SAS drives may be installed Drive requirements should be specified at the time the system is purchased Also included on the front panel is a system power ON OFF button and LEDs see Figure 1 5 page 1 6 The rear panel contains I O faceplates for seven PCI cards of which only six are used graphics RAID NIC etc two AC power supplies with latch locks and power cord sockets and all I O connectors Figure 1 5 Major fea tures of the RES 32XR3 are described in Table 1 2 page 1 2 Major internal compo nents of the RES 32XR3 Configuration 3 can be seen in the open top view cover removed of Figure 1 4 Themis Computer 1 Overview and Specifications Overview Air Flow Deflector Power Supply 1 of 2 12 DIMM Memory Modules and 2 CPUs underneath ES ra Lithium Battery PCI Slot 1 PCI 32 bit 33 MHz deg 3 D 2 PCI Express x4 3 PCI 32 biV33 MHz Ja TINA all 4 PCI Express 2 0 x8 5 PCI Express 2 0 x8 6 PCI Express 2 0 x8 PCI Card Retainer Bracket 120 mm Fan 1 of 2 KEELAMA LENKIN y 4 gt y ee es 2 e ang ce co antiigi 6 Ws Sree oa rE ET ASE CD DVD Front Combo Drive Storage Drive 1 of 8 Housing Figure 1 4 Major Components of RES 32XR3 Configuration 3 Open Top View 1 5 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 1 2 System LEDs and I O Connectors All RES 32XR3 syste
125. to CI Enghtety mebtpmez IT change the default language O Engish tiime after tire installation ar igith eth alice ly Red Hat Linux can install and o HI support several languages To HO Engish K ime use more than ane Language on CI Esnimis Your sysiom choose specific C Famese Farce alamta languages to be installed or O jet select all languages to Nave all lp h meigum available languages installed lf z d Peete te Canala on the system dp 1 7 Peach grenze Use the Reset butten te cancel ai Feeney ears mmimirgi hornet alo etiam f IS rs pel Lg gel L Aen Je ps SSS SSS EE Figure C 4 Language Selection Once you select the appropriate language click Next to continue Step 5 Using your mouse select the correct layout type for example U S English for the keyboard you would prefer to use for the installation and as the system default see Figure C 5 on page C 5 Themis Computer C Red Hat Enterprise Linux 5 Installation Installation RED HAT ENTERPRISE LINUX 5 Qe Select the appropriate keyboard for the system AE Soventan Spanish Sweden viks french Swiss French latint Suess German Swiss Garman tatin1 Tamil insonpt Tamil Typewriters Turkish ae US thteenational Ukrainian Umited Kingaom ip mease notas anx on Figure C 5 Selecting Layout Type Once you have made your selection click Next to continue Step 6 Enter the installation numb
126. to an audio connector on the rear of the chassis Line In The RES Custom Module contains an Audio chip on its PCB routed to J1 PCB Printed Circuit Board e Attach the appropriate I O Cables from the RES Custom Module to external devices Stereo Audio Out Jack Optional USB Ports A and B DB9 Serial Port Figure E 3 Attach the Appropriate I O Cables E 3 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 E 1 2 E 1 2 1 USB2 5V To J10 Pin 2 USB2 DM To J10 Pin 4 USB2 DP To J10 Pin 6 USB2 GND To J10 Pin 8 E 4 If the RES Audio USB Serial Port Custom Module is removed from its drive slot it is recommended that the end of the motherboard I O cable attached to the Module header be appropriately tagged so that it can be correctly reconnected when the Module is reinstalled If the I O cable is removed from its motherboard header it should also be appropriately tagged for proper reconnection at a later time Connector Pinouts USB Ports A and B The RES Audio USB Serial Port Custom Module supports two USB Universal Serial Bus port connectors see Figure E 4 for pinouts USB A and USB B on the front I O panel USB pinout descriptions are listed in Figure E 4 pinout signal descriptions are described in Table E 1 USB A USB B ui DA 81 USB1 5V To J10 Pin 1 A2 ER USB1 DM To J10 Pin 3 A3 B3 USB1 DP To J10 Pin 5 A4 B4 USB1 GND To
127. turn it 45 degrees counter clockwise The drive is now locked chassis If the handle is closed before the drive is fully inserted the latch mechanism t Caution When in the closed position the latch handle secures the drive to the may not fully engage to secure the drive Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 1 6 Removable 120 mm Fan The RES 32XR3 Configuration 3 contains two high speed 120 mm fans Both fans are removable for replacement in case of a fan failure Note Since RES 32XR3 Configuration 3 fans are hot swappable it is not nec essary to turn off system power in order to remove and replace a fan 2 1 6 1 Removing and Installing a 120 mm Fan Perform the following steps to remove and install a 120 mm fan 1 On the top cover of the chassis push the fan lid lock left to unlock the fan lid see Figure 2 11 Pull the fan lid upward exposing the two 120 mm fans 2 Each fan is secured by a locking latch on the left hand side To remove a fan press the latch lock toward the center of the fan with the left hand index finger With the right hand index finger press on the right hand side of the fan and pull the fan directly upward from the RES 32XR3 chassis Hinged Fan Lid Locking Stud 1 of 3 Ze Fan Lid Lock Figure 2 11 The RES 32XR3 Configuration 3 120 mm Fans 120 mm Fan Latch Lock 120 mm Fan 3 When the fan is removed its 4 wire connector will
128. ut of a rack Mounting slides are optional and should be ordered at the time your system is purchased To learn how to install rack mount slides refer to Appendix B Rack Mount Slide Installation Caution Any screws used to mount a slide to a RES 32XR3 chassis must not ex ceed a length of 3 8 to prevent excessive penetration of the chassis Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 2 3 Operation 2 3 1 Plugging in the AC Power Cords Before powering on the RES 32XR3 plug in the AC power cords as follows 1 On the rear of the RES 32XR3 plug an AC power cord shipped with unit into the AC power socket on each power supply see Figure 2 14 Locking Lever System Power LED AC Power Socket i a 1 SESS Figure 2 14 AC Power Socket and LED on the RES 32XR3 Configuration 3 Rear 2 3 2 Turning the System On 1 Plug the AC power cord from each of the RES 32XR3 Configuration 3 power supplies into a live AC outlet 2 On the front of the RES 32XR3 push the system power on off button see Fig ure 2 15 This will cause the system POWER LED to light green as well as the power supply module LED to light green System Power H il es pad a On Off Button RES SA III Stress gt Cel 44244444844 TITIIITLL Figure 2 15 System Power Button and LED on the RES 32XR3 Front Power LED 2 16 Themis Computer 2 Insta
129. uting 3 24 View BMC System Event Log 3 25 BIOS Recovery 3 35 Boot Sector Recovery from a Serial Port 3 36 Boot Sector Recovery from a USB Device 3 35 Boot Sector Recovery from an IDE CD Index 1 Themis Computer RES 32XR3 Installation Manual Version 1 2 ROM 3 36 How to Recover the AMIBIOS Image 3 35 Boot Configuration 3 3 Boot Device Priority 3 31 CD DVD Drives 3 32 Removable Drives 3 32 Storage Drives 3 31 Changing Configuration Data 3 2 Exit Options 3 33 Discard Changes 3 34 Discard Changes and Exit 3 33 Load Fail Safe Defaults 3 34 Load Optimal Defaults 3 34 Save Changes and Exit 3 33 Main Setup 3 3 System Overview 3 3 Security Settings 3 29 Change Supervisor Password 3 29 Change User Password 3 30 Clear User Password 3 30 Password Check 3 30 Supervisor Password 3 29 User Access Level 3 30 User Password 3 29 Starting 3 1 Starting the Setup Utility 3 2 Boot Settings Screen 3 31 C Cautions xxv CD RW DVD ROM drive 12 2 Chipset 2 COM1 COM serial port header 1 9 Comments xxiv components major 1 4 Configuration 3 SuperMicro X8DT3 motherboard xix SuperMicro X8DT3 F motherboard xix SuperMicro X8DT3 LN4F motherboard xix Configuration 3 motherboards 7 7 Configuration system 2 17 Index 2 Connector Pinouts PS 2 Keyboard and Mouse A Serial Port A 2 USB Ports A 2 D DAT drive 4 Dimensions chassis 2 disk drive adapter functions super I O 4 DVI connector 2 17 E ECC S
130. v 240 pin DIMM sockets 2 3RU form factor 2 5520 chipset 7 10 A AC power cord 7 19 2 16 power LED 2 17 power socket 2 16 power supply 1 4 accessory kit 19 Advanced Settings Screen 3 5 AMIBIOS 3 AMI_FLSH Hyperterminal Screen 3 38 antistatic bags 2 1 antistatic wrist strap 2 Appendix E Re Packing Instructions 1 19 audio connectors D 3 Audio USB Serial Port Custom Module D 1 COM Serial Connector Pinout D 5 COM1 Serial Connector Pinout Signal Descriptions D 5 header connectors D 3 I O cables D 2 VO headers D 2 installation D 2 ordering D 7 PCB and Carrier D rear audio connectors D 3 Stereo Audio Connector Pinout D 6 Stereo Audio Out Connector Pinout Signal Descriptions D 6 Stereo Audio Out jack D 6 USB Connector Pinout Descriptions D 4 USB Connector Pinouts D 4 Signal B bezel 2 9 BIOS Setup Utility Advanced Setup Configurations 3 5 ACPI Configuration 3 23 Advanced Chipset Control 3 0 BOOT Features 3 5 DMI Event Log 3 28 IDE SATA Configuration 3 14 IP Address Configuration 3 26 IPMI Configuration 3 24 MAC Address Configuration 3 27 Northbridge Configuration 3 11 PCI PnP Configuration 3 17 Power Configuration 3 6 Processor and Clock Options 3 7 QPI Links Speed 3 10 Remote Access Configuration 3 19 SEL PEF Configuration 3 28 Set LAN Configuration 3 26 Southbridge Configuration 3 13 Subnet Mask Configuration 3 27 Super IO Device Configuration 3 18 System Health Monitor 3 20 Trusted Comp
131. vanced Host Inter face A Caution Take caution when using this function This feature is for advanced pro grammers only 3 3 7 2 3 3 7 3 The options are IDE default RAID Intel RAID Adaptec and AHCI SATA 2 Configuration Selecting Enhanced will set SATA 2 to native SATA mode The options are Dis abled and Enhanced default Primary IDE Master Slave Secondary IDE Master Slave Third IDE Master and Fourth IDE Master These settings allow the user to set the parameters of Primary IDE Master Slave Secondary IDE Master Slave Third and Fourth IDE Master slots Hit lt Enter gt to activate the following submenu screen for detailed options of these items Set the correct configurations accordingly The items included in the submenu are Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 15 Type Select the type of device connected to the system The options are Not Installed Auto default CD DVD and ARMD LBA Large Mode LBA Logical Block Addressing is a method of addressing data on a storage drive In the LBA mode the maximum drive capacity is 137 GB For drive capacities over 137 GB your system must be equipped with a 48 bit LBA mode addressing If not contact your manufacturer or install an ATA 133 IDE controller card that supports 48 bit LBA mode The options are Disabled and Auto default Block Multi Sector Transfer Block Mode boosts the IDE d
132. w what you think about this manual e Information provided in the manual was complete Agree Disagree Not Applicable___ e Information was well documented and easy to follow Agree Disagree ___ Not Applicable___ e Information was easily accessible Agree Disagree Not Applicable___ e The manual was useful Agree___ Disagree___ Not Applicable___ Please write down any comments you may have about this manual including how it can be improved Name Title Company Address
133. xceed 255 3 3 19 1 Parameter Selector Use this feature to select the parameter of your Subnet Masks configuration 3 3 19 2 Subnet Mask This item displays the current subnet mask setting for your IPMI connection If Static is selected the subnet mask setting can be entered The value of each three digit number separated by dots should not exceed 255 3 3 19 3 Current Subnet Mask in the BMC This item displays the current Subnet Mask used for your IPMI connection The value of each three digit number separated by dots should not exceed 255 3 27 Themis Computer RES 32XR3 Installation Manual Configuration 3 Version 1 2 3 3 19 4 Gateway Address This is the IP address of the gateway in the network that the system is connected to It s usually a router If Static is selected the subnet mask setting can be entered The value of each three digit number separated by dots should not exceed 255 3 3 19 5 Mac Address BIOS will automatically enter your system s Mac address however it may be over ridden Mac addresses are 6 two digit hexadecimal numbers Base 16 0 9 A B C D E F separated by dots i e 00 30 48 D0 D4 60 3 3 20 Event Log Configuration 3 3 20 1 View Event Log Use this option to view the System Event Log 3 3 20 2 Mark all events as read This option marks all events as read The options are OK default and Cancel 3 3 20 3 Clear event log This option clears the Event Log
134. y support for Direct I O VT d by reporting the I O device assignments to VMM through the DMAR ACPI Tables This feature offers fully protected I O resource sharing across the Intel plat forms providing the user with greater reliability security and availability in net working and data sharing The settings are Enabled and Disabled default Active State Power Management Select Enabled to use the power management for signal transactions between the PCI Express LO and L1 Links Select Enabled to configure PCI E LO and L1 Link power states The options are Disabled default and Enabled Themis Computer 3 BIOS Setup Utility 3 3 6 3 3 6 1 3 3 6 2 3 3 6 3 3 3 6 4 3 3 6 5 3 3 6 6 Advanced Setup Configurations Southbridge Configuration This feature allows the user to configure the settings for the Intel ICH Southbridge chipset USB Functions Select Enabled to use onboard USB connections The Options are Disabled and Enabled default Legacy USB Support Select Enabled to use Legacy USB devices If this item is set to Auto Legacy USB support will be automatically enabled if a legacy USB device is installed on the motherboard The settings are Disabled Enabled default and Auto USB 2 0 Controller Available when USB Functions is set to Disabled This feature displays the current USB controller used in the motherboard The set tings are Disabled and Enabled default USB 2 0 Controller Mode

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