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1. 6 5 Power Supply Units The standard power setup for the SC840 consists of two separate 300 watt power supply units and one empty power bay Both units provide a continuous 300 watts of power to the system Addtional power will auto matically engage if more power is needed up to 600W total Due to the hot plug redundency if one powe unit fails the other unit s takes over the load without powering down the system A third power supply may be added to the empty bay in which case the system will be provided with 600 watts of power and still have a 300 watt backup The power supply units have an auto switching that can automatically sense and operate at any voltage within the range of 110 to 220 volts input Power Supply Failure If any one of the active power units fails or the system requires more than 300W power the backup unit will automatically power up and enable the System to continue operating without interruption An audible alarm will notify you of a power unit failure which you can disable by pressing the alarm button on the control panel The PWR Fail LED will also illuminate and remain on until the failed unit has been replaced Replacing Power Units 1 Identify the failed power unit The power unit with the illuminated red LED indicates it has failed and should be replaced as soon as possible Or if the LED is neither red or green check to make sure all power cables are all fully plugged into the back of the chassi
2. Super I O Configuration BIOS SETUP UTILITY Configure Nat317Serial Port s and Parallel P Serial Portl Address Serial Portl IRQ Serial Port2 Address Serial Port2 IRQ Parallel Port Address Parallel Port IRQ Parallel Port Mode ECP Mode DMA Channel Select Screen Select Item Change Optio General Help F10 Save and Exit ESC Exit V02 03 C Copyright 1985 2000 American Megatrends Inc The Super IO Configuration includes the following items Serial Port 1 Address This option specifies the base I O port address of serial port 1 The set tings for this item include Disabled 3F8 and 3E8 and 2E8 Select the de sired setting and then press Enter Serial Port 1 IRQ This option specifies the Interrupt Request address of serial port 1 The settings for this item include Disabled 4 and 3 Serial Port 2 Address This option specifies the base I O port address of serial port 2 The settings for this item include Disabled 2F8 3E8 and 2E8 Serial Port 2 IRQ This option specifies the Interrupt Request address of serial port 2 The settings for this item include Disabled 4 and 3 7 5 SUPERSERVER 6041G Manual Parallel Port Address This option specifies the I O address used by the parallel port The settings for this item include Disabled 378 278 and 3BC Select your setting and then press Enter Parallel Port IRQ This option allows the user to set the Parallel Port IRQ The settings for this
3. Checkpoint 11h 12h 13h 14h 19h 1Ah 2Bh 2Ch 2Dh 23h 24h 25h 27h 28h 2Ah 2Eh 2Fh 30h 31h 32h Code Description Next checking if End or Ins keys were pressed during power on Initializing CMOS RAM if the nitialize CMOS RAM in every boot AMIBIOS POST option was set in AMIBCP or the End key was pressed Next disabling DMA controllers 1 and 2 and interrupt controllers 1 and 2 The video display has been disabled Port B has been initialized Next initializing the chipset The 8254 timer test will begin next The 8254 timer test is over Starting the memory refresh test next The memory refresh line is toggling Checking the 15 second on off time next Passing control to the video ROM to perform any required configu ration before the video ROM test All necessary processing before passing control to the video ROM is done Looking for the video ROM next and passing control to it The video ROM has returned control to BIOS POST Performing any required processing after the video ROM had control Reading the 8042 input port and disabling the MEGAKEY Green PC feature next Making the BIOS code segment writable and performing any necessary configuration before initializing the interrupt vectors The configuration required before interrupt vector initialization has completed Interrupt vector initialization is about to begin Interrupt vector initialization is done Clearing the password if
4. CPUs write operations stored in the L1 cache aren t copied to main memory until absolutely necessary This is the default setting System BIOS Cacheable This option enables you to move the system BIOS to the memory cache to improve performance Settings are Enabled and Disabled Event Log Configuration Event Logging This option Enables or Disables the logging of events You can use this screen to select options for the Event Log Configuration Settings You can access sub screens to view the event log and mark all events as read Use the up and down arrow keys to select an item and the plus and minus keys to change the option setting The settings are described on the following pages The screen is shown below ECC Event Logging This option Enables or Disables the logging of ECC events The events logged by AMIBIOS are post errors such as a bad BIOS floppy errors or hard drive errors Clear All Event Logs This option can be used to tell the system to clear the event log on the next boot up The settings are No and Yes View Event Log Highlighting this and pressing lt Enter gt will allow you to view the unread events from the event log area Mark All Events As Read Highlighting OK and pressing lt Enter gt will mark all events in the log area as having been read The settings are OK and Cancel 7 13 SUPERSERVER 6041G Manual Peripheral Device Configuration Onboard SCSI This option allows you
5. Floppy Drive Seek Use this option to Enable or Disable the floppy seek routine on bootup Boot Settings Configuration Quick Boot This option allows the BIOS to skip certain tests that are normally perfomred on boot up You can disable the option to speed up boot time The settings are Disabled and Enabled Quiet Boot If Disabled this option will cause the normal POST messages to be dis played upon setup When Enabled the OEM logo is displayed instead of the POST messages The settings are Enabled and Disabled Add On ROM Display Mode Set this option to display add on ROM read only memory messages The settings for this option are Force BIOS and Keep Current Force BIOS 7 10 Chapter 7 BIOS allows the computer to force a third party BIOS to display during system boot Keep Current has the system display AMIBIOS information on bootup BootUp Num Lock This option is used to select the status of the Number Lock function on your keyboard on bootup The settings are On and Off BootUp CPU Speed This option is used set the CPU speed to either High or Low PS 2 Mouse Support This option specifies whether a PS 2 Mouse will be supported Settings are Enabled and Disabled Typematic Rate Set this option to select the rate at which the computer repeats a key that is held down Settings are Fast and Slow Fast This sets the rate the computer repeats a key to over 20 times per second Under normal opera tions
6. Ultra SCSI Channel B AGP PRO BATTERY 3V PCIGA 2 JBTi sm JP59 CO 3V PCI64 1 ULTRA160 LVD SCSI CHB GUPER P3TDE6 5V PCI64 4 LI C1 WOR WOL SV PCI64 3 JP63 5V PCI64 2 AIC 7899 ULTRA160 LVD SCSI CHA 5V PCI64 1 COCOCO C JA6 JA2 JA4 SLED Note Memory modules must be installed in pairs Jumpers not indicated are for test purposes only Also see Figures 5 2 and 5 3 for the locations of the I O ports and the Front Control Panel JF1 connectors See Section 5 8 for details on jumper settings and pin definitions 5 12 Chapter 5 Advanced Motherboard Setup Jumper JA2 JA4 JA6 JBT1 JP1 JP3 JP55 JP56 JP57 JP58 JP60 JP61 JP62 DIP Switch SW1 1 4 Connector ATX POWER 1 P3TDE6 Quick Reference Description LVD SCSI Ch A Term LVD SCSI Ch B Term 50pin SCSI Ch B Term CMOS Clear FSB Speed Setting Spread Spectrum Enable Third P S Fail Enable Disable Speaker Enable Disable BIOS Select LAN NIC Enable Disable SCSI Enable Disable PCI 66 33 MHz Select Thermal Fan Enable Disable Description CPU Core Bus Ratio Description Default Settin Open Enabled Open Enabled Open Enabled Pins 1 2 Normal Pins 1 2 Auto Open Disabled On Enabled On Enabled P
7. i JF1 The Fan Fail LED connnection is 5 in located on pins 4 and 6 of JF1 Number Definition s 4 5V Refer to the table on the right for S EDEN pin definitions PC PC Pin Definitions JF 1 The I C connection is located on Pin Number Definition pins 16 and 18 of JF1 Refer to 38 SDA the table on the right for pin defini 18 SCL tions Chassis Intrusion Chassis Intrusion Pin Definitions JF1 A Chassis Intrusion connection is Pin A Number Definition located on pin 20 of JF1 See the 20 intrusion Input table on the right for pin defini tions Note An extra chassis in trusion header is provided at JP52 5 16 Chapter 5 Advanced Motherboard Setup Keyboard Lock Keyboard Lock Pin Definitions JF 1 The Keyboard Lock connection is ER located on pins 22 and 24 of JF1 Number E di Refer to the table on the right for 24 GND pin definitions Speaker Speaker Connector Pin Definitions JF1 Pin The speaker connection is located Number Function Definition on pins 28 30 32 and 34 of JF1 op gee ee Refer to the table on the right for 32 Key 34 t Speaker data pin definitions USB3 USB3 Pin An additional connection for USB3 Definitions JF1 in is included on pins 25 27 29 and Number Definition 31 of JF1 for front side USB ac A oes cess You will need a USB cable 29 31 Ground not include
8. 3 2 4 ON ON ON ON CPU 400 533 450 600 500 666 550 733 600 800 OFF 650 866 OFF 700 933 OFF 750 1000 OFF 800 1064 OFF OFF ON 850 1130 0OFF OFF ON 900 1200 0FFj OFFJ OFF IOFFION IOFFION IOFFIOFF IOFFIOFFIOFF ON ON ON ON ON ON OFF ooFFoFF 550 MHz 100 MHz x 5 5 CPU Speed Bus Freq x Ratio Chapter 5 Advanced Motherboard Setup 5 10 Jumper Settings Explanation of Jumpers To modify the operation of the motherboard jumpers can be used to choose between optional set tings Jumpers create shorts be tween two pins to change the function of the connector Pin 1 is identified with a square solder pad on the printed circuit board See the motherboard layout pages for jumper locations Note On a 2 pin jumper Closed means the jumper is over both pins and Open means the jumper is either on one pin only or completely off CMOS Clear Refer to the table on the right for the jumper settings to clear CMOS Always remove the AC power cord from the sys tem before clearing CMOS NOTE For an ATX power supply you must completely shut down the system remove the AC power cord and then use JBT1 to clear CMOS Replace JBT1 back to the pin 1 2 po sition before powering up the sys tem again Do not use the PW_ON connector to clear CMOS Front Side Bus Speed The JP1 jumper sets the FSB speed Refer to the table on the right for a description of the
9. Chapter 7 BIOS The Main BIOS Setup Menu Press the Delete key during the POST Power On Self Test to enter the Main Menu of the BIOS Setup Utility All Main Setup options are described in this section The Main BIOS Setup screeen is displayed below BIOS SETUP UTILITY Main Advanced Chipset PCIPnP Power Boot Security Exit AMIBIOS Version 07 00xx BIOS Build Date xXx XxXx XX BIOS ID Processor Type i PentiumIII Processor Speed 933MHz System Memory 256MB System Time 10 10 00 System Date Thu Select Screen 08 24 00 Select Item Change Field Select Field General Help Save and Exit Exit V02 03 C Copyright 1985 2000 American Megatrends Inc Use the Up Down arrow keys or the Tab key to move between the different settings in the above menu When the items System Time and System Date are highlighted type in the correct time date in the time field and then press Enter The date must be entered in MM DD YY format The time is entered in HH MM SS format The time is in also 24 hour format For example 5 30 a m appears as 05 30 00 and 5 30 p m as 17 30 00 Press the lt ESC gt key to exit the Main Menu and use the Left Right arrow keys to enter the the other categories of BIOS settings The next section is described in detail to illustrate how to navigate through the menus Note Items displayed in gray are preset and cannot be selected Items with a blue arrow are commands not
10. Introduction This chapter describes the AMIBIOS for the P3TDE6 The AMI ROM BIOS is stored in a Flash EEPROM and can be easily upgraded using a floppy disk based program Note Due to periodic changes to BIOS some settings may have been added or deleted and might not yet be recorded in this manual Refer to the Manual Download area of our web site for any changes to BIOS that are not reflected in this manual System BIOS The BIOS is the Basic Input Output System used in all IBM PC XT AT and PS 2 compatible computers The BIOS ROM stores the system param eters such as amount of memory type of disk drives and video displays etc BIOS ROM requires very little power When the computer is turned off a back up battery provides power to the BIOS ROM enabling it to retain the System parameters Each time the computer is powered on the computer is then configured with the values stored in the BIOS ROM by the system BIOS which gains control when the computer is powered on How To Change the Configuration Data The configuration data that determines the system parameters may be changed by entering the BIOS Setup utility This Setup utility can be ac cessed by pressing Del at the appropriate time during system boot Starting the Setup Utility Normally the only visible POST Power On Self Test routine is the memory test As the memory is being tested press the Delete key to enter the main menu of the BIOS Setup utili
11. jumper settings 5 21 Connector Jumper Cap e ENS wo N e Pin 1 2 short Setting CMOS Clear Jumper Settings JBT1 Jumper Position Definition 1 2 Normal 2 3 CMOS Clear Position Position 1 2 2 8 CMOS Clear Front Side Bus Speed Jumper Settings JP1 Jumper Position Definition 1 2 Auto 2 3 100 MHz OFF 133 MHz Note The Auto setting allows the CPU to set the speed SUPERSERVER 6041G Manual SCSI Termination Enable Disable SCSI Termination Enable Disable Jumper Settings The SCSI Termination jumper JP64 J JP64 allows you to enable or id Definition disable termination for the SCSI Open Enabled Closed Disabled connectors The normal default position is open to enable SCSI termination Refer to the table on the right for jumper settings LVD Channel A SCSI Termination Enable Disable LVD CH A SCSI Termination Jumper Settings JA2 Jumper JA2 allows you to enable Jumper or disable termination for the LVD Position Definition Open Enabled Channel A SCSI connector The Closed Disabled normal default position is open to enable SCSI termination Refer to the table on the right for jumper settings LVD Channel B SCSI Termination Enable LVD CH B SCSI Disable Termination Jumper Settings JA4 Jumper Jumper JA4 allows you to enable Position Definition i Open Enabled or
12. this setting should not be changed Slow This sets the rate the computer repeats a key to under 8 times per second System Keyboard This option is to let the system know if a keyboard is Present or Absent Primary Display This option specifies the type of monitor display you have installed on the system The settings are Absent VGA EGA Color 40 x 25 Color 80 x 25 and monochrome Parity Check Use this option to either Enable or Disable the use of memory parity check ing Boot to OS 2 This option can be used to boot the system to an OS 2 operating system The settings are No and Yes 7 11 SUPERSERVER 6041G Manual Wait for F1 if Error This settings for this option are Enabled and Disabled Disabled This prevents the AMIBIOS to wait on an error for user intervention This setting should be used if there is a known reason for a BIOS error to appear An example would be a system administrator must remote boot the system The computer system does not have a keyboard currently attached If this setting is set the system will continue to bootup in to the operating system If F1 is enabled the system will wait until the BIOS setup is entered Enabled This option allows the system BIOS to wait for any error If an error is detected pressing lt F1 gt will enter Setup and the BIOS setting can be adjusted to fix the problem This normally happens when upgrading the hardware and not setting the BIOS to recognize it
13. AN and make sure no ribbon cables touch the backplane or obstruct the holes which aid in proper airflow 6 9 SUPERSERVER 6041G Manual CD ROM and Floppy Drive Installation The top cover of the chassis must be opened to gain full access to the CD ROM and floppy drive bays The CD ROM drive must have a slim profile to fit into the 6041G First release the two retention screws that secure the unit to the rack Next release the two screws that secure the top cover to the chassis Grasp the two handles on either side and pull the unit straight out There are two square recesses in the top cover to help you push the cover away from you until it stops You can then remove the top cover from the chassis You must power down the system before installing or removing floppy or IDE drives Drives mount on rails and should click into place to be correctly and fully installed in their bays You should keep the metal shields in place on any unused drives to reduce EMI and noise and to facilitate the airflow inside the chassis The floppy disk drive cable has seven twisted wires A red mark on a wire typically designates the location of pin 1 Asingle floppy disk drive ribbon cable has 34 wires and two connectors to provide for two floppy disk drives The connector with twisted wires always connects to drive A and the connector that does not have twisted wires always connects to drive B 6 10 Chapter 6 Advanced Chassis Setup
14. Hit Delete Message Display This option tells the system to display or not display the Hit Delete to Enter Setup message The settings are Enabled and Disabled Processor Serial Number This option allows the operating system and applications to be able to read the CPU serial number from your CPUs The settings are Enabled and Dis abled Note This option is not available for Intel Celeron Processors be cause these processors do not contain a processor serial number Internal Cache This option is for enabling or disabling the internal CPU L1 cache Settings include Disabled Write Thru Write Back and Reserved Disabled This option prevents the system from using the internal CPU L1 cache This setting should be used to slow the computer system down or to trouble shoot error messages Write Thru This option allows the computer system to use the internal CPU L1 cache as Write Though cache Write Through cache is slower than Write Back cache It performs write operations to the internal L1 CPU cache and system memory simultaneously Write Back This option allows the computer system to use the internal CPU L1 cache as Write Back cache Write Back cache is faster than Write Through cache Write Back cache is a caching method in which modifications to data in the cache aren t copied to the cache source until absolutely necessary Write back caching is available on all CPUs supported by this BIOS With these 7 12 Chapter 7 BIOS
15. OR USED WITH THE PRODUCT INCLUDING THE COSTS OF REPAIRING REPLACING INTEGRATING INSTALLING OR RECOVERING SUCH HARDWARE SOFTWARE OR DATA Any disputes arising between manufacturer and customer shall be governed by the laws of Santa Clara County in the State of California USA The State of California County of Santa Clara shall be the exclusive venue for the resolution of any such disputes Supermicro s total liability for all claims will not exceed the price paid for the hardware product Unless you request and receive written permission from SUPER MICRO COMPUTER you may not copy any part of this document Information in this document is subject to change without notice Other products and companies referred to herein are trademarks or registered trademarks of their respective companies or mark holders Copyright 2005 by SUPER MICRO COMPUTER INC All rights reserved Printed in the United States of America Preface Preface About This Manual This manual is written for professional system integrators and PC techni cians It provides information for the installation and use of the Super Server 6041G Installation and maintainance should be performed by expe rienced technicians only The SuperServer 6041G is a high end dual processor 4U rackmount server based on the SC840 4U rackmount server chassis and the Super P3TDE6 a dual processor motherboard that supports one or two Pentium Ill FCPGA processors and 4GB regi
16. Organization Flowchart Chapter 1 Introduction to the SuperServer 6041G LEE ule 1 1 1 2 Server Chassis Features gre pe d 1 2 123 Mainboard Featutes erret terree 1 4 1 4 Contacting Supermicro aote nere erede 1 6 Chapter 2 Server Installation udi c r 2 1 2 2 Unpacking the SuperServer 6041G sse 2 1 2 8 Preparing for Setup ui Choosing a Setup Location nct ett 2 2 Rack Precaullonis edes thi mmi ere echo entren dut enatis 2 2 Server IPrecautions otn e tpi tp re Entre 2 2 2 4 Installing the SuperServer 6041G into a Rack eee 2 3 Identifying the Sections of the Rack Rails eeeses 2 3 Installing the Chassis Rails se 2 4 Installing the Rack Rails ntn nenne 2 4 Installing the Server into the Rack seeeen 2 5 2 5 Checking the Motherboard Setup 2 6 Checking the Drive Bay Setup sseeeeneneeneeeeneenn Chapter 3 System Interface 3s GOVOIMIGW cuiii ot ben eoe esta de aN CEU AUC ee ccce n ils 3 1 3 2 Control Panel Switches cccccccscccsscccssscessseccessecesseeesseecessseeesseeesseeeessaees 3 1 vi Table of Contents Fan FaillinnahAvtancdidah ani ditantinl teniente 3 3 OVEMNC AL E E A A A 3 3 SCA Channel 5c or a ele ent riis 3 3 3 4 SCSI Drive Carrier LEDS sss tenente nennen 3 4 3 5 Power Supply BEDS erem iere E taie reete 3 4 3 6 Motherb
17. Reach inside the chassis and pull the housing out of its hole in the chassis Unscrew the four screws that hold the fan in the housing to remove the bad fan Installing a new system exhaust fan Replace the failed fan with an identical 9 cm 12 volt fan available from Supermicro After the new fan has been installed reassemble the fan housing To put it back in the chassis first insert the bottom fan housing tab into its hole then swing the top of the fan toward the chassis pushing down on the top fan housing tab to to insert it into the corresponding hole in the chassis You should hear it click into place when fully inserted Finish by plugging the fan cable back into the same power connector you removed it from Check that the fan is working properly and that the LEDs on the control panel circuit board Figure 6 2 and the control panel have turned off Finish by replacing the top panel of the chassis 6 4 Drive Bay Installation Removal Accessing the Drive Bays SCSI Drives You do not need to access the inside of the chassis to replace or swap SCSI drives Proceed to the next step for instructions Note You must use standard 1 high 80 pin SCA SCSI drives in the SuperServer 6041G CD ROM Floppy Disk Drive For installing removing the CD ROM or floppy disk drive you will need to gain access to the inside of the chassis by removing the top cover Proceed to the CD ROM and Floppy Drive Installa tion section later in this chapter f
18. SERIA ies IDE Connectors Ultrat60 SCSI Connectors eene rrr rtr 5 12 IRQS eite oinnia OE E o neni eam ain nissan aes Chapter 6 Advanced Chassis Setup 6 1 Static Sensitive Devices ee Eten a a De Re d 6 1 6 2 COMMON Patel oerte erede AR a debiera reed EA 6 2 6 8 System False o e feti P e ee te eR E rice eeu 6 4 System Fan Failure te DE E Ei 6 4 Replacing System Cooling Fans itsasia 6 5 viii Table of Contents Replacing System Exhaust Fans 5 nteienieeette 6 6 6 4 Drive Bay Installation Remowval eee nennen nnne 6 6 Accessing the Drive Bays ote meret 6 6 SCSI Drive Installation seen 6 7 CD ROM and Floppy Drive Installation eeee 6 10 6 5 Power Supply Units erret etn o een PO ERR ERIS EX EIE Power S pply Faille credere t t n tede Replacing Power Units Chapter 7 BIOS Yel lntrOQUCctiOr incipere erc eec ice crede eer ee teet ee aede 7 2 BIOS Features 7 3 Running Setup 7 4 Advanced BIOS Setup ii tea eee 7 4 75 Chipset Set pzaiie seated rt ch et ve ed e dte 7 15 7 6 POl Plug and Play Setup ertt t retten 7 18 7 Power Setup unsc maiori rerom eoe EHE 7 20 Lo Mem 7 23 7 9 Security Setup ane a Oe as d P ies 7 25 17 10 EXIESeUp ero retine erento nien Rt n aaa Sa E araber 7 27 Appendices Appendix A BIOS Error Beep Codes and Messages e
19. a parallel port two USB ports PS 2 mouse and keyboard ports a video monitor port and a 10 100 MB Ethernet port Onboard Graphics The 6041G includes an 8 MB ATI Rage XL video card for superior graphics capabilities Other Features Other onboard features that promote system health include eight voltage monitors a chassis intrusion header auto switching voltage regulators chassis and CPU overheat sensors virus protection and BIOS rescue 1 5 SUPERSERVER 6041G Manual 1 4 Contacting Supermicro Headquarters Address SuperMicro Computer Inc 980 Rock Ave San Jose CA 95131 U S A Tel 1 408 503 8000 Fax 1 408 503 8008 Email marketing supermicro com General Information support supermicro com Technical Support Web Site www supermicro com Europe Address SuperMicro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro nl General Information support supermicro nl Technical Support rma supermicro nl Customer Support Asia Pacific Address SuperMicro Taiwan 4F No 232 1 Liancheng Rd Chung Ho 235 Taipei County Taiwan R O C Tel 886 2 8226 3990 Fax 886 2 8226 3991 Web Site www supermicro com tw Technical Support Email support supermicro com tw Tel 886 2 8228 1366 ext 132 or 139 1 6 Chapter 2 Server Installation Chapter 2 Server Installation
20. been read and saved Displaying the Hit lt DEL gt message next The Hit lt DEL gt message is displayed The protected mode memory test is about to start Preparing the descriptor tables next The descriptor tables are prepared Entering protected mode for the memory test next Entered protected mode Enabling interrupts for diagnostics mode next Interrupts enabled if the diagnostics switch is on Initializing data to check memory wraparound at 0 0 next Data initialized Checking for memory wraparound at 0 0 and finding the total system memory size next The memory wraparound test is done Memory size calculation has been done Writing patterns to test memory next The memory pattern has been written to extended memory Writing patterns to the base 640 KB memory next Patterns written in base memory Determining the amount of memory below 1 MB next The amount of memory below 1 MB has been found and verified Determining the amount of memory above 1 MB memory next for a soft reset and clearing the memory below 1 MB for the soft reset next If this is a power on situation going to checkpoint 4Eh next The memory below 1 MB has been cleared via a soft reset Clearing the memory above 1 MB next The memory above 1 MB has been cleared via a soft reset Saving the memory size next Going to checkpoint 52h next The memory test started but not as the result of a soft reset Displaying the first 64 KB memory size next The memor
21. disable termination for the LVD Closed Disabled Channel B SCSI connector The normal default position is open to enable SCSI termination Refer to the table on the right for jumper settings SpeakerEnable Disable Speaker Enable Disable Jumper Settings JP56 You may want to disable the Jumper onboard speaker Jumper JP56 Position Definition A y Open Disabled gives you this option Refer to the Closed Enabled table on the right for jumper set tings 5 22 Chapter 5 Advanced Motherboard Setup LAN1 Enable Disable LAN1 NIC Enable Disable Use jumper JP58 to enable or dis Jumper Settings JP58 Jumper able LAN1 NIC Network Interface Position ipetinifion Card on your motherboard Refer Open Enabled Closed Disabled to the table on the right for jumper settings Thermal Fan Enable Thermal Fan Enable Disable Disable Jumper Settings JP65 Jumper Use jumper JP65 to enable or dis Position __ Definition Open Disabled able the thermal fan When en Closed Enabled abled the Thermal Fan will acti vate when the chassis tempera ture reaches a predetermined tem perature Refer to the table on the right for jumper settings PCI Speed Setting PCI Slot Speed Jumper Settings JP66 Use jumper JP66 to set the speed Jumper TR Position Definition of the PCI slot Refer to the table Open 66 MHz on the right for jumper s
22. for this option are Enabled and Disabled MPS 1 4 Support The settings for this option are Enabled and Disabled 7 17 SUPERSERVER 6041G Manual 7 6 PCI PnP Setup Choose PCI PnP Setup from the AMIBIOS Setup main menu All PCI PnP options are described in this section The PCI PnP Setup screen is shown below BIOS SETUP UTILITY Main Advanced Chipset BOZPDP Power Boot Security Exit Reset Config Data No PCI Latency Timer 64 Allocate IRQ to VGA Yes Palette Snooping Disabled PCI IDE BusMaster Disabled USB Controller Enabled IRQ 3 Available IRQ 4 Available Select Screen IRQ 5 Available N Select Item IRQ 7 Available Change Option IRQ 9 Available F1 General Help IRQ 10 Available F10 Save and Exit IRQ 11 Available ESC Exit IRQ 14 Available IRQ 15 Available V07 00 C Copyright 1985 2001 American Megatrends Inc Reset Configuration Data Choosing the Yes setting will cause the PnP configuration data in the BIOS to be cleared on the next boot up Choosing the No setting does not force PnP data to be cleared on the next boot PCI Latency Timer This option specifies the latency timing of the PCI clocks for all PCI devices Settings include 32 64 96 128 160 192 224 and 248 PCI clocks Allocate IRQ to PCI VGA This option lets you allocate an interrupt request IRQ to the PCI VGA adapter card if used The settings are Yes and No 7 18 Chapter 7 BIOS Pal
23. item include 5 and 7 Parallel Port Mode This option specifies the parallel port mode The settings for this item include Normal Bi directional EPP and ECP ECP Mode DMA Channel This option allows the user to set the setting for the ECP Mode of the DMA Channel The settings for this item include 0 1 and 3 IDE Configuration Onboard PCI IDE Controller This option allows the user to enable or disable the integrated IDE Control ler The settings include Disabled Primary Second and Both Select Dis abled to disable the Integrated IDE Controller Select Primary to enable the Primary IDE ontroller only Select Secondary to enable the Secondary IDE Controller only Select Both to enable both Primary and Secondary IDE Controllers 7 6 Chapter 7 BIOS Primary IDE Master When entering Setup BIOS automatically detects the presence of IDE devices This displays the auto detection status of the IDE de vices You can also manually configure the IDE drives by providing the following information This option allows the user to configure the IDE devices When the desired item is highlighted selected press Enter and the following screen will be displayed Type This option sets the type of device that the AMIBIOS attempts to boot from after AMIBIOS POST is completed The settings include Not installed Auto CDROM and ARMD The Auto setting allows BIOS to automatically detect the presence of the IDE cont
24. lt Tab gt key The function keys are diabled when this setting is enabled The settings are Serial Ansi and Disabled 7 14 Chapter 7 BIOS 7 5 Chipset Setup Choose Chipset Setup from the AMIBIOS Setup Utility main menu The screen is shown below All Chipset Setup options are described following the screen BIOS SETUP UTILITY Main Advanced Chipset PCIPnP Power Boot Security Exit C000 16k Shadow Cached C400 16k Shadow Cached C800 16k Shadow Disabled CC00 16k Shadow Disabled D000 16k Shadow Disabled D400 16k Shadow Disabled D800 16k Shadow Disabled DC00 16k Shadow Disabled Write Combining for P6 to PCI Enabled Select Screen Act to DeAct 6CLKS ti Select Item Act to Read Write 3CLKS 2CLKS Change Option RA Cycle Time 9CLK Fl General Help SDRAM CAS Latency CAS Latency3 F10 Save and Exit Memory Auto Precharge Disabled ESC Exit SDRAM Fast Timing 11 1 1 10 1 1 V02 03 C Copyright 1985 2000 American Megatrends Inc C000 16k Shadow C400 16k Shadow C800 16k Shadow CC00 16k Shadow D000 16k Shadow D400 16k Shadow D800 16k Shadow DCO00 16k Shadow These options specify how the 16 KB of video ROM at each of the above addresses is treated When Disabled the contents of the video ROM are not copied to RAM When Enabled the contents of 16 KB of video ROM beginning at the above address are copied shadowed from ROM to RAM 7 15 SUPERSERVER 6041G Manual for faster application
25. the POST DIAG switch is on Any initialization before setting video mode will be done next Initialization before setting the video mode is complete Configuring the monochrome mode and color mode settings next Bus initialization system static output devices will be done next if present See the last page for additional information Completed post video ROM test processing If the EGA VGA controller is not found performing the display memory read write test next The EGA VGA controller was not found The display memory read write test is about to begin The display memory read write test passed Look for retrace checking next The display memory read write test or retrace checking failed Performing the alternate display memory read write test next The alternate display memory read write test passed Looking for alternate display retrace checking next B 3 SUPERSERVER 6041G Manual Checkpoint 34h 37h 38h 39h 3Ah 3Bh 40h 42h 43h 44h 45h 46h 47h 48h 49h 4Ch 4Dh 4Eh 4Fh 50h Code Description Video display checking is over Setting the display mode next The display mode is set Displaying the power on message next Initializing the bus input IPL general devices next if present See the last page of this chapter for additional information Displaying bus initialization error messages See the last page of this chapter for additional information The new cursor position has
26. to Enable or Disable the onboard SCSI Power Lost Control This option determines how the system will respond when power is reap plied after a power loss condition Choose Always On to automatically start up the system when power is reapplied Always Off means you must push the main power button to restart the system after power is restored System Health Monitor The BIOS continuously monitors the health of your system by measuring certain voltage levels and temperatures CPU1 Current Temperature CPU2 Current Temperature This reading displays the real time temperatures of CPU1 and CPU2 System Overheat Warning This option allows you to Enable or Disable a system overheat warning signal used to notify you in the event of a dangerous rise in heat levels Overheat Warning Temperature This option allows you to specify the temperature threshold that when exceeded will trigger the overheat warning alarm The rest of the System Health Monitor menu lists various voltages and tem peratures as they are currently being measured These include CPU tem perature CPU voltage the roms of the CPU chassis and thermal control fans as well as various other voltages Remote Access Configuration This option allows the user to redirect the console display through the COM port when enabled This is useful when two computers are hooked up to a single monitor When enabled the user can toggle the display from one system to the other using the
27. to notify you of chassis overheating or a fan power supply failure The LED indicating the cause of the alarm will remain illumi nated after the audible alarm is disabled RESET e RESET The reset switch reboots the system 3 1 SUPERSERVER 6041G Manual 3 3 Control Panel LEDs The control panel located on the front of the SC840 chassis has seven LEDs These LEDs provide you with critical information related to different parts of the system This section explains what each LED indicates when illuminated and any corrective action you may need to take e Power Indicates power is being supplied to the system s power supply units This LED should normally be illuminated when the system is operating e HDD Indicates IDE channel activity On the SuperServer 6041G this light indicates CD ROM drive activity when flashing Hf e PWR Fault Indicates a power supply failure This should be accom panied by an audible alarm which you can disable with the alarm switch on the control panel Inspect the power supply units at the front left of the chassis The unit with the red LED illuminated has failed Refer to Section 6 5 for instructions on replacing the failed unit Because the power sup 3 2 Chapter 3 System Interface plies are hot plug units you do not need to remove power from the system when replacing The third power supply unit is a backup that activates automatically to keep power supplied to th
28. 1 Handling the P3TDE6 Motherboard Static electrical discharge can damage electronic components To prevent damage to any printed circuit boards PCBs it is important to handle them very carefully see previous chapter Also note that the size and weight of the P3TDE6 motherboard can cause it to bend if handled improperly which may result in damage To prevent the P3TDE6 motherboard from bending keep one hand under the center of the board to support it when handling The following measures are generally sufficient to protect your equipment from static discharge Precautions Use a grounded wrist strap designed to prevent static discharge Touch a grounded metal object before removing any board from its anti static bag Handle a board by its edges only do not touch its components periph eral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the motherboard add on cards and peripherals back into their anti static bags when not in use 5 1 SUPERSERVER 6041G Manual For grounding purposes make sure your computer chassis provides ex cellent conductivity between the power supply the case the mounting fasteners and the motherboard Unpacking The motherboard is shipped in antistatic packaging to avoid static electrical damage When unpacking the board make sure the person handling it is static protected 5 2 Motherboard Installation This section explai
29. 1000 4 11 Safety EN 60950 IEC 60950 Compliant UL Listed USA CUL Listed Canada TUV Certified Germany CE Marking Europe D 2
30. 2 1 Overview This chapter provides a quick setup checklist to get your SuperServer 6041G up and running Following these steps in the order given should enable you to have the system operating within a minimum amount of time This quick setup assumes that your SuperServer 6041G system has come to you with the processors and memory preinstalled If your system is not already fully integrated with a motherboard processors system memory etc please turn to the chapter or section noted in each step for details on installing the specific component 2 2 Unpacking the SuperServer 6041G You should inspect the box the SuperServer 6041G was shipped in and note if it was damaged in any way If the server itself shows damage you should file a damage claim with the carrier who delivered it Decide on a suitable location for the rack unit that will hold the SuperServer 6041G It should be situated in a clean dust free area that is well venti lated Avoid areas where heat electrical noise and electromagnetic fields are generated You will also need it placed near a grounded power outlet Read the Rack and Server Precautions in the next section 2 3 Preparing for Setup The box the SuperServer 6041G was shipped in should include two sets of rail assemblies two rail mounting brackets and the mounting screws you will need to install the system into the rack Follow the steps in the order given to complete the installation process in a minimum amount of t
31. D 2 FDHDIN The floppy connector is located A GND Fioseryed on J15 and requires a 34 pin rib 5 Key 6 FDEDIN 7 GND 8 Index bon cable for operation See the 9 GND 10 Motor Enable A Nn 11 GND 12 Drive Select B table on the right for pin defini 13 mE 14 ARPA tions 15 GND 16 Motor Enable 17 GND 18 DIR 19 GND 20 STEP 21 GND 22 Write Data 23 GND 24 Write Gate 25 GND 26 Track 00 27 GND 28 Write Protect 29 GND 30 Read Data 31 GND 32 Side 1 Select 33 GND 34 Diskette 5 24 Chapter 5 Advanced Motherboard Setup IDE Connector Pin Definitions J13 J14 IDE Connectors Pin Number Function Pin Number Function 1 Reset IDE 2 GND 3 Host Data 7 4 Host Data 8 There are no jumpers to config E ost Data h Hosi Data 9 ure the onboard IDE connectors 7 Host Data 5 8 Host Data 10 9 Host Data 4 10 Host Data 11 J13 and J14 See the table on 11 HostData3 12 Host Data 12 en 13 Host Data 2 14 Host Data 13 the right for pin definitions 15 Host Data 1 48 Host Data 14 17 Host Data 0 18 Host Data 15 19 GND 20 Key 21 DRQ3 22 GND 23 I O Write 24 GND 25 I O Read 26 GND 27 IOCHRDY 28 BALE 29 DACK3 30 GND 31 IRQ14 32 IOCS16 33 Addr 1 34 GND 35 Addr 0 36 Addr 2 37 Chip Select 0 38 Chip Select 1 39 Activity 40 GND Ultra160 SCSI Connectors 68 pin Ultra160 SCSI Connectors JA1 JA3 JA5 Connector Connector Contact Contact See the table on the Number Signal Names Number Signal Names r
32. E6 contains header pins for various control panel connectors See Figure 5 2 for the locations of the power and reaset buttons and LEDs for overheat NIC1 NIC2 the IDE hard disk drive and power Note that even and odd numbered pins are on opposite sides of the connector All JF2 wires have been bundled into a single ribbon cable to simplify the connection to the 840 chassis Make sure the red wire plugs into pin 1 as marked on the board The other end connects to the Control Panel PCB board located just behind the system status LEDs on the chassis See Section 5 8 for details and pin de scriptions for JF1 JF1 also contains pins for these and other functions JF1 was designed for use with other chassis and is not used in the SuperServer 6041G Figure 5 2 Control Panel Connectors 34 33 o o Alarm Reset Speaker lt olo gt USB3 Ojo prd olo LED 4 Keyboard ojo Lock ojo Unused Chassis Int 959 4 Oo Oo FC lt F1 gt Reset Control Power LED Oo gt m lt Control HDD LED Oo Oo NIC LED En gt PWR ON Control NIC1LED P o Control X Power Fail lt o o IDE LED Control Overheat LED P lolol 4 Ground Power Fail Button Fan Fail Oo Oo gt PWR LED Ground Reset Button 5V olo Ground Power Button Standby J 2 1 2 1 JF1 JF2 5 5 SUPERSERVER 6041G Manual 5 4 OPorts Control Panel Connectors The I O ports are color coded in conformance with the PC 99 specification
33. LED OH Pins 7 and 8 on JF2 are for the overheat LED which provides ad vance warning of chassis over heating See Figure 5 2 for pin definitions See the table on the right for pin definitions on JF1 NIC 1 LED The LED connection for the Net work Interface Controller 1 is lo cated on pins 11 and 12 of JF2 This header is used to display net work activity for LAN1 See Fig ure 5 2 for pin definitions See the table on the right for pin definitions on JF1 5 15 Reset Pin Definitions JF1 Pin Number Definition 15 Reset 17 Ground Power Fail LED Pin Definitions JF1 Pin Number Definition 8 45V 10 PWR Fail Overheat LED OH Pin Definitions JF1 Pin Number Definition 26 OH Active NIC LED Pin Definitions JF1 Pin Number Definition 12 5V 14 GND SUPERSERVER 6041G Manual HDD IDE LED IDE LED Pin Definitions The IDE hard drive LED connection JF1 is located on pins 13 and 14 of fen eee JF2 See Figure 5 2 for pin defini PR tions See the table on the right for pin definitions on JF1 Power LED PWR LED Pin Definitions JF1 The Power LED connection is lo M u umber Definition cated on pins 15 and 16 of JF2 1 5V n 3 K See Figure 5 2 for pin definitions 5 GND See the table on the right for pin definitions on JF1 Fan Fail Fan Fail LED Pin Definitions
34. SUPERO SUPERSERVER 6041G SUPERMICR ER orien Oo o USER S MANUAL 1 0a The information in this User s Manual has been carefully reviewed and is believed to be accurate The vendor assumes no responsibility for any inaccuracies that may be contained in this document makes no commitment to update or to keep current the information in this manual or to notify any person or organization of the updates Please Note For the most up to date version of this manual please see our web site at www supermicro com SUPERMICRO COMPUTER reserves the right to make changes to the product described in this manual at any time and without notice This product including software if any and documentation may not in whole or in part be copied photocopied reproduced translated or reduced to any medium or machine without prior written consent IN NO EVENT WILL SUPERMICRO COMPUTER BE LIABLE FOR DIRECT INDIRECT SPECIAL INCIDENTAL SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGES IN PARTICULAR THE VENDOR SHALL NOT HAVE LIABILITY FOR ANY HARDWARE SOFTWARE OR DATA STORED
35. Screw the assembly securely to the rack using the brackets provided Attach the other assembly to the other side of the rack making both are at the exact same height and with the rail guides facing inward see Figure 2 3 2 4 Chapter 2 Server Installation Figure 2 3 Installing the Rack Rails Installing the Server Into the Rack You should now have rails attached to both the chassis and the rack unit The next step is to install the server into the chassis Do this by lining up the rear of the chassis rails with the front of the rack rails Slide the chassis rails into the rack rails keeping the pressure even on both sides you may have to depress the locking tabs when inserting See Figure 2 4 on the next page When the server has been pushed completely into the rack you should hear the locking tabs click Finish by inserting and tightening the thumbscrews that hold the front of the server to the rack For best results the rack cabinet depth should be 900 mm or more 2 5 SUPERSERVER 6041G Manual Installing the Server Into the Rack 2 4 Figure 2 6 Chapter 2 Server Installation 2 5 Checking the Motherboard Setup After you install the 6041G in the rack you will need to open the unit to make sure the motherboard is properly installed and all the connections have been made 1 Access the inside of the 6041G see Figure 2 5 First release the retentio
36. See Figure 5 3 below for the colors and locations of the various I O ports Figure 5 3 I O Port Locations and Definitions Mouse Parallel Port Green Burgundy 2 m ow WM Keyboard USB COM1 COM2 LAN Ethernet Purple Ports Turquoise Port 5 6 Chapter 5 Advanced Motherboard Setup 5 5 Processor Installation When handling the processor package avoid placing direct pressure on the label area of the fan This section covers the installation procedure for 370 pin socket proces sors You should install the processor first and then install the mother board in the chassis Following the installation procedures in the order they appear in this section should eliminate the most common problems encoun tered when installing a system IMPORTANT Always connect the power cord last and always remove it before adding removing or changing any hardware components Heatsink Follow the instructions that came with your processor or heatsink to attach a heatsink to the processor Your heatsink should have a 3 pin fan which connects to the CPU FAN header Make sure that good contact is made between the CPU chip the die and the heatsink Insufficient contact or improper types of heatsinks thermal compound or fans can cause the pro cessor to overheat which may crash the system You can check the CPU temperature readings in the Periperal Setup Section of BIOS Processor Your motherboard has two 370 pin sockets whic
37. The settings for this option are Disabled and Enabled The optimal settings are Cached for C000 C400 C800 anc CCOO and Disabled for all the other addresses Write Combining for P6 to PCI This settings for this option are Disabled and Enabled Select Enabled to enable the function of Write Combining for P6 to PCI Act to Deact This settings for this option are 6 CLKS and 5 CLKS Act to Read Write This settings for this option are 3 CLKS and 2 CLKS RAS Precharge Time This option defines the RAS precharge time Settings are 3 CLKS and 2 CLKS RAS Cycle Time This option defines the RAS cycle time Settings include 10 CLKS 9 CLKS 8 CLKS and 7 CLKS SDRAM CAS Latency This option defines the SDRAM CAS Latency settings CAS stands for Column Address Strobe Settings include CAS Latency 3 and CAS La tency 2 Memory Auto Precharge The settings are Enabled and Disabled SDRAM Fast Timing This option defines the Fast timing settings for SDRAM Settings include 11 1 1 and 10 1 1 1 7 16 Chapter 7 BIOS Memory Writing Posting The settings are Enabled and Disabled Fast ECC Enable The settings are Enabled and Disabled ISA IO Cycle Delay This settings for this option are FULL Delay 1 5 BLCK 2 5 BLCK and 3 5 BLCK Scrubbing Enable The settings are Enabled and Disabled AGP Device Address Space Size This settings for this option are 32MB 64MB 128MB 256MB and 512MB AGP Operations This settings
38. al shock Instead use rubber mats that have been specifically designed as electrical insulators The power supply power cords must include a grounding plug and must be plugged into grounded electrical outlets 4 1 SUPERSERVER 6041G Manual Motherboard Battery CAUTION There is a danger of explosion if the onboard battery located near the DIMM modules is installed upside down which will reverse its polarity see Figure 4 1 This battery must be replaced only with the same or an equivalent type recommended by the manufacturer Dispose of used batteries according to the manufacturer s instructions CD ROM Laser CAUTION this server may have come equipped with a CD ROM drive To prevent direct exposure to the laser beam and hazardous radiation exposure do not open the enclosure or use the unit in any unconventional way 4 2 General Safety Precautions A Follow these rules to ensure general safety Keep the area around the SuperServer 6041G clean and free of clutter The SuperServer 6041G weighs approx 67 Ibs 30 5 kg when fully loaded When lifting the system two people at either end should lift slowly with their feet spread out to distribute the weight Always keep your back straight and lift with your legs Place the chassis top cover any system components that have been removed away from the system or on a table so that they won t accidentally be stepped on While working on the system do
39. assis Setup Replacing System Cooling Fans Removing a system cooling fan With the chassis cover removed first unplug the fan cable corresponding to the failed fan Then remove the fan unit from the chassis by depressing the locking tab on the fan housing and pulling the unit straight up see Figure 6 3 Take apart the fan housing to remove the fan from inside Installing a new system cooling fan Replace the failed fan with an identical 9 cm 12 volt fan available from Supermicro After the new fan has been installed reassemble the fan housing and plug it back into its slot You should hear it click into place when fully inserted Then plug the fan cable back into the same header on the circuit board you removed it from You should then wind the excess cable around the tabs on the fan housing to keep it out of the way Check that the fan is working properly and that all the LEDs on the control panel circuit board Figure 6 2 and the control panel have turned off Finish by replacing the top panel of the chassis Figure 6 3 System Cooling Fan Removal Locking Tab SUPERSERVER 6041G Manual Replacing System Exhaust Fans Removing a hot plug fan housing With the chassis cover removed first unplug the fan cable corresponding to the failed fan Next push down on the locking tabs at the top and bottom of the fan housing which protrude through the back end of the chassis This will detach the housing from the chassis
40. ate a suc cessful connection yellow and activity green Wake On LAN Wake on LAN The Wake On LAN header is des Pin Definitions WOL ignated as WOL Refer to the Pom Definition table on the right for pin defini 1 5V Standby tions You must enable the LAN 2 Ground 3 Wake up Wake Up setting in BIOS to use this feature You must also have a LAN card with a Wake on LAN connector and cable Note NC indicates No connection 5 18 Chapter 5 Advanced Motherboard Setup Wake On Ring Wake On Ring The Wake On Ring header is des Pin an n WOR ignated as WOR Refer to the i table on the right for pin defini Number Definition f s 1 G d tions You must enable the Ring 2 Wake Wake Up setting in BIOS to use this feature You must also have a modem card with a WOR con nector and cable to use this fea ture SLED1 SCSI LED Indicator SCSI LED Pin Definitions SLED1 i The SLED connector is used to pro sian Definition vide an LED indication of SCSI ac Positive 2 Negative tivity Refer to the table on the right 3 Negative 4 Positive for connecting the SCSI LED Chassis Intrusion Chassis Intrusion A 2 pin Chassis Intrusion header Header is located at JP52 When a chas ido ad Sis intrusion microswitch is con Pin ae nected to JP52 a message will be SC HE sent to the system administrator if 2 Ground a chassis intrusion condition is detecte
41. b site for a complete listing of supported processors http www supermicro com TechSupport htm Memory Your P3TDE6 has four DIMM slots that can support up to 4 GB of ECC registered DIMM Module sizes of 128MB 256MB 512MB and 1 GB may be populatd in the slots The P3TDE6 supports two way interleaved memory Notes on Memory Note 1 The memory speed must match the front side bus FSB speed being used i e both 133 MHz or both 100 MHz Note 2 Memory Modules must be installed in pairs first in the two slots of BankO and then in both slots of Bank1 if 4 DIMMs are needed Onboard SCSI Onboard SCSI is provided with an Adaptec AIC 7899 SCSI controller chip which supports dual channel Ultra160 SCSI at a burst throughput rate of 160 MB sec for each channel The P3TDE6 provides three SCSI ports two 68 pin LVD Ultra160 connectors on channels A and B and one 50 pin Legacy SCSI connector shared with channel B 1 4 Chapter 1 Introduction Expansion Slots The P3TDE6 has a total of six PCI expansion slots that consist of two 64 bit 3 3 V 66 MHz slots and four 64 bit 5V 33 MHz slots These PCI slots run on two separate data buses to provide a total I O bandwidth of 792 MB sec In addition to the PCI slot there is also an AGPx2 Pro slot on board Onboard Controllers Ports An onboard IDE controller supports one floppy drive and up to four UDMA 33 hard drives or ATAPI devices Onboard I O ports include two COM ports
42. ble to error be properly programmed 12 beeps BIOS ROM file The BIOS ROM file found does incorrect size not match the size of the flash device 13 beeps BIOS ROM image The BIOS ROM file layout mismatch configuration does not match image present in the flash device 5 short _1 Memory Error No memory detected in the long beeps system 6 short 1 Memory Error EDO memory detected in long beeps system 7 short 1 SMBUS Error SMBUS error long beeps Appendix B AMIBIOS POST Diagnostic Error Messages Appendix B AMIBIOS POST Checkpoint Codes When AMIBIOS performs the Power On Self Test it writes diagnostic codes checkpoint codes to I O port 0080h If the computer cannot complete the boot process diagnostic equipment can be attached to the computer to read I O port 0080h B 1 Uncompressed Initialization Codes The uncompressed initialization checkpoint codes are listed in order of execution Checkpoint DOh Dih D3h D4h D5h D6h Code Description The NMI is disabled Power on delay is starting Next the initialization code checksum will be verified Initializing the DMA controller performing the keyboard controller BAT test starting memory refresh and entering 4 GB flat mode next Starting memory sizing next Returning to real mode Executing any OEM patches and setting the Stack next Passing control to the uncompressed code in shadow RAM at E000 0000h The initialization code is copied to seg
43. ce et ane eter m ati aati 5 17 USBI 5 17 Fan leaders ounce ec tC ded te ege eo vau 5 17 ATX PS 2 Keyboard and Mouse Ports see 5 18 Universal Serial Bus Connector sirien 5 18 Ethernet POLt crei e a ERREUR DEREN DU REN 5 18 Wake On LAN inisa pe rtt a eo M C D E Ve PX Mere S 5 18 VELO me 5 19 SLEDI SCSILED itin rere e EE Ee RES 5 19 Chassis IntrusiQni a uice ree een xe rhe c da een aed 5 19 IC Header roe enters eye areae rea eee Renee Ori Sia o Fade UARIIS Serial Ports 529 DIP Switcli Settings itte te eet e RED ERE 5 20 DIP Switch 1 Core Bus Ratio err rte en 5 20 5 10 Jumper Settings otis ted Fever 5 21 Explanation Of JUImpelSs o nicer tne nir tr Ere ne ts 5 21 i le Ierrcm e 5 21 Front Side BUS SPOS Eee tete re ente peste EEES 5 21 SCSI Termination Enable Disable ssssssseee 5 22 LVD Channel A SCSI Termination Enable Disable 5 22 LVD Channel B SCSI Termination Enable Disable Speaker Enable Disable 2 rie tr ertet LAN 1 Erable Disable reet ert Tihermal Far Enable Disable ttes POl Speed Settilg i e tti rm nsa tenerent ete VGA Enable Disable nitri rette rent ee dec ey 5 11 Parallel Port Floppy HDD and SCSI Connections sssss Parallel Port Connector etm eerie E Ee Floppy GoOnn6ectof oi E erbe ED ni
44. d Standby and Suspend Inactivity Timer This option specifies the length of hard disk inactivity time that should expire before entering the power conserving state The settings include Off 1 5 10 20 30 60 and 120 minutes Suspend Timeout This option specifies if BIOS is to monitor for display activity when in a power saving state The settings include Off 1 2 3 4 5 6 7 8 9 and 10 minutes 7 21 SUPERSERVER 6041G Manual IRQ1 IRQ3 IRQ4 IRQ5 IRQ6 IRQ7 IRQ9 IRQ10 IRQ11 IRQ12 IRQ14 IRQ15 With the above options you can monitor each interrupt request and resume the system s normal power up state when activated Settings are Ignore and Monitor All IRQs are defaulted to Ignore except for IRQ 1 12 and 14 whcih default to Monitor USB Controller Resume This allows you to wake up the system from a USB device The settings for this option Disabled and Enabled PME Resume This allows you to wake up the system from a PME device The settings for this option Disabled and Enabled RI Resume This option allows the system to resume the function of Ring Indicator The settings for this option Disabled and Enabled 7 22 Chapter 7 BIOS 7 8 Boot Setup Choose Boot Setup from the AMIBIOS Setup main menu All Boot Setup options are described in this section The Boot Setup screen is shown below BIOS SETUP UTILITY Main Advanced Chipset PCIPnP Power Boot Security Exit Vw M oM B
45. d activated when the top cover of the chassis is removed See the table on the right for pin definitions PC Header PC Header Pin Definitions The I C header is located at JP70 JP70 See the table on the right for pin Pin mM Number Definition definitions 1 SDA 2 SCL 5 19 SUPERSERVER 6041G Manual Serial Ports Serial ports COM1 and COM2 are located under the parallel port see Figure 5 3 the right for pin definitions 5 9 DIP Switch Settings DIP Switch 1 Core Bus Ratio Refer to the table on The red DIP Switch labeled SW1 is located on the P3TDE6 has four individual which are bus ration will show SW1 Switches used to set the core The table on the right you which CPU Core Bus Ratio to use The general rule is to divide the CPU speed by the bus speed 133 or 100 MHz for the P3TDE6 For example if you have a 550 MHz CPU dividing it by 100 will give you a CPU Core BUS Ratio of 5 5 After determining the CPU Core Bus Ratio refer to the table on the right for the correct settings of DIP SW 1 Note Most Intel Processors have a fixed Core Bus ratio that will overwrite the setting of DIP Switch 1 5 20 Serial Port Pin Definitions COM1 COM2 Pin Number Definition Pin Number Definition 1 DCD 6 CTS 2 DSR 7 DTR 3 Serial In 8 RI 4 RTS 9 Ground 5 Serial Out 10 NC CPU Core Bus Ratio Selection DIP Switch1 SW iswiswiswi 4
46. d of the new password when the password is changed If you forget the password you must erase the system configuration information in CMOS 7 25 SUPERSERVER 6041G Manual Change Supervisor Password This option allows you to change a supervisor password that was entered previously Change User Password This option allows you to change a user password that was entered previ ously Clear User Password Use this option to clear the user password so that it is not required to be entered when the system boots up Boot Sector Virus Protection This option allows you to enable or disable a virus detection program to protect the boot sector of your hard disk drive The settings for this option Disabled and Enabled If Enabled AMIBIOS will display a warning when any program or virus issues a Disk Format command or attempts to write to the boot sector of the hard disk drive 7 26 Chapter 7 BIOS 7 10 Exit Setup Choose Exit Setup from the AMIBIOS Setup main menu All Exit Setup op tions are described in this section The Exit Setup screen is shown below BIOS SETUP UTILITY Main Advanced Chipset PCIPnP Power Boot Security Exit Exit system setup with Exit Saving Changes saving the changes Exit Discarding Changes Load Optimal Defaults Load Fail Safe Defaults Discard Changes Select Screen Select Item Go to Sub Scree General Help Save and Exit Exit V02 03 C Copyright 1985 2000 American Megatr
47. d to use this connec tion Refer to the table on the right for pin definitions Fan Headers Fan Header Pin Definitions CPU CHASSIS and OH FAN There are several fan headers on Pin i i Number Detinition the P3TDE6 to provide cooling for Ground bl ck various components In addition to 2 12V red 3 Tachometer one fan header for each proces Caution These fan headers Sor there is one overheat and two are DC power chassis fan headers See the motherboard layout for locations Refer to the table on the right for pin definitions Note The maximum current limita tion for the onboard fans is 0 35 amps for each not to exceed 1 2 amps for any group of four fans 5 17 SUPERSERVER 6041G Manual ATX PS 2 Keyboard and PeZ Keyboard PS 2 Mouse Ports and Mouse Port Pin Definitions J18 The ATX PS 2 keyboard and the In PS 2 mouse are located on J18 Number Definition Refer to the table on the right for E 2e pin definitions The mouse port is 3 Ground above the keyboard port See Fig 4 voc 5 Clock ure 5 7 6 NC Universal Serial Bus USB B Two Universal Serial Bus connec USBO USBI PONE tors are located beside the key board mouse ports USBO is the a bottom connector and USB1 is the top connector Ethernet Port An Ethernet port is located beside RJ45 Ethernet Port the VGA port on the I O backplane This port accepts RJ45 type cables Two LEDs indic
48. de the drive LEDs then swing the burgundy colored handle fully out and use it to pull the unit straight out see Figure 6 5 Note Your Operating System must have RAID support to enable the hot plug capability of the SCSI drives Release Button Handle Figure 6 5 Removing SCSI Drives Dummy module upgradeable to a S redundant power supply Important Regardless of how many SCSI hard drives AN are installed all 4 SCSI drive carriers must remain in the drive bays to maintain proper airflow 6 8 Chapter 6 Advanced Chassis Setup SCSI Power Cables SCSI power cables should be routed in such a way that they do not block the airflow through the chassis There is a 4 pin connector for the power cables Connect the connector to the SCA SCSI backplane as noted in Step 3 Configuring the hot plug SCSI drives SCA Backplane The SCSI drives plug into a SAF TE compliant SCA backplane that provides power and bus termination A RAID controller can be used with the SCA backplane to provide data security The operating system you use must have RAID support to enable the hot swap capability of the SCSI drives All the jumpers on the SCA backplane are preset and should not be changed See Figure 6 6 Overheat Warning Header Connects to Control Panel Figure 6 6 SCA Backplane Use caution when working around the SCA backplane Do not touch the backplane with any metal objects
49. e all power and data cables are properly and firmly connected and not blocking the airflow 2 7 SUPERSERVER 6041G Manual Top Chassis Cover Removed Cover Recesses P3TDE6 WS Exhaust Fan Z Processors Control Panel PCB Figure 2 5 Accessing the Inside of the SuperServer 6041G 2 8 Chapter 2 Server Installation 2 6 Checking the Drive Bay Setup Next you should check to make sure the peripheral drives and the SCA drives and backplane have been properly installed and all connections have been made 1 Accessing the drive bays All drives can be accessed from the front of the server For servicing the CD ROM and floppy drives you will need to remove the top chassis cover The SCSI disk drives can be installed and removed from the front of the chassis without removing the top chassis cover 2 Install a CD ROM and floppy disk drives Refer to Section 6 4 if you need to reinstall a CD ROM and or floppy disk drive to the system 3 Check the SCSI disk drives Depending upon your system s configuration your system may have some SCSI drives already installed If you need to install SCSI drives please refer to Section 6 4 4 Check the airflow Airflow is provided by four hot swap input fans and one exhaust fan all of which are 9 cm in size An air shroud has been installed to direct sufficient cooling air to the processors which generate the most heat Also note that all power and data cables have been r
50. e green LED on the front of the SCSI drive carrier indicates drive activity A connection to the SCSI SCA backplane enables this LED to blink on and off when that particular drive is being accessed e Red When illuminated the red LED on the front of the SCSI drive carrier indicates the drive has experienced a fault or has crashed Please refer to Section 6 4 for instructions on replacing failed SCSI drives 3 5 Power Supply LEDs Each of the two separate power units that comprise the power supply has a single LED that can be illuminated either as green or red e Green When green the power unit has power applied to it and is operating normally e Red A red LED is normal only when system power has been turned off If the LED is red it indicates that either 1 no power is being applied to that particular power unit or 2 that particular power unit has failed First check to make sure the power cord for that unit is plugged into both the power unit and a grounded wall outlet power strip If the power cord is properly connected not refer to Section 6 5 for instructions on replacing the power supply unit 3 6 Motherboard LED There is only one LED on the motherboard When illuminated it indicates that system power is present on the motherboard This LED is located at the lower right hand corner of the PSTDE6 when installed in and viewed from the front of the rackmount chassis This LED provides the same indication as the Power LED o
51. e system e Fan Fail Indicates a system fan failure This may be one or more of the four hot swap intake fans or the one exhaust fan A fan failure is accompanied by an audible alarm which you can disable with the alarm Switch on the control panel When a fan stops working all the other sys tem fans will increase their RPM to compensate until the failed unit is re placed See Section 6 2 for more details Refer to Section 6 3 for in structions on replacing system fans It is unnecessary to power down the System as these are hot swap fans Note You must use the exact same brand and rating of fan for replacement These can be obtained directly from Supermicro e Overheat Indicates an overheat condition in the chassis This may be caused by cables obstructing the airflow in the system or the ambient room temperature being too warm You should also check to make sure that the chassis cover is installed and that all fans are present and operat ing normally e SCA Channel Indicates an overheat condition in the area of the SCA SCSI drives and backplane This may be caused by cables obstructing the airflow in the system or the ambient room temperature being too warm You should also check to make sure that the chassis cover is installed and that all fans are present and operating normally 3 3 SUPERSERVER 6041G Manual 3 4 SCSI Drive Carrier LEDs Each SCSI drive carrier has two LEDs e Green When illuminated th
52. ected 6 1 SUPERSERVER 6041G Manual Extra Rack Unit Retention Screw each side Control Panel Top Cover Thumbscrew System LEDs Main Power each side Slim CD ROM Drive Floppy Drive SuperServer 6041G Alarm Reset System Reset Power Supplies Empty PS Module SCSI Drives ipl Rack Unit Retention Screw Upgradeable toa triple each side Redundant Power Supply Figure 6 1 Chassis Front View 6 2 Control Panel The control panel located on the front of the chassis must be connected to the JF1 connector on the motherboard to provide you with system status and alarm indications A ribbon cable has bundled these wires together to simplify the connection Connect the cable from JF1 on the motherboard making sure the red wire plugs into pin 1 to JP9 on the Control Panel PCB printed circuit board Pull all excess cabling out of the airflow path The LEDs inform you of system status See Chapter 3 System Interface for details on the LEDs and the control panel buttons Figure 6 2 shows the connections jumpers and indicators located on the control panel PCB De tails on JF1 can be found in the Chapter 5 Advanced Motherboard Installa tion 6 2 Chapter 6 Advanced Chassis Setup s JP10 E LJP JP21 pup a 19 2o 3o 4a Fan Headers 6 StH Fan Fail LEDs 6 Fan E S Power i Zann r Chassis Override H Intrusion Switch Switch Syste
53. ee A 1 Appendix B AMIBIOS POST Diagnostic Error Messages esessss B 1 Appendix Gr Bist of Figures rente telae C 1 Appendix D System Specifications eseessseeeeeeeeenennennennn D 1 SUPERSERVER 6041G User s Manual Notes Chapter 1 Introduction Chapter 1 Introduction to the SuperServer 6041G 1 1 Overview The Supermicro SuperServer 6041G is a high end dual processor 4U rackmount server that features some of the most advanced technology currently available The SuperServer 6041G is comprised of two main sub systems the SC840 4U rackmount chassis and the P3TDE6 dual 370 pin Pentium Ill processor mainboard Please refer to our web site for informa tion on operating systems that have been certified for use with the Super Server 6041G In addition to the mainboard and chassis various hardware components may have been included with your SuperServer 6041G as listed below e One 1 1 44 floppy drive e One 1 slim CD ROM drive e One 1 Supermicro CD containing various drivers and utilities o One 1 Control Panel PCB e Rackmount hardware with screws Two 2 rack rail assemblies Four 4 brackets for mounting the rack rails to the rack e One 1 SCA backpanel e Four 4 SCA SCSI drive carriers e SCSI Accessories One 1 internal and one 1 external Ultra160 SCSI cable One 1 set of SCSI driver diskettes One 1 SCSI manual One 1 System manual PD uu You sh
54. embly To do this pull this inner rail out as far as possible you should hear a click sound as a locking tab emerges from inside the rail assembly and locks the inner rail Depress the locking tab to pull the inner rail completely out Figure 2 1 Identifying the Sections of the Rack Rails 2 3 SUPERSERVER 6041G Manual Installing the Chassis Rails Position the fixed chassis rail sections you just removed along the side of the 6041G chassis making sure the five screw holes line up Be aware that these two rails are left right specific Screw the rail securely to the side of the chassis see Figure 2 2 Repeat this procedure for the other rail on the other side of the chassis Locking Tabs As you have seen both chassis rails have a locking tab which serves two functions The first is to lock the server into place when installed and pushed fully into the rack which is its normal position These tabs also lock the server in place when fully extended from the rack This prevents the server from coming completely out of the rack when you pull it out for servicing Locking Tab Figure 2 2 Installing the Chassis Rails Installing the Rack Rails Determine where you want to place the SuperServer 6041G in the rack See Rack and Server Precautions in Section 2 3 Position the fixed rack rail sliding rail guide assemblies at the desired location in the rack keeping the sliding rail guide facing the inside of the rack
55. ends Inc Exit Saving Changes Highlighting this setting and then pressing Enter will save any changes you made in the BIOS Setup program and then exit Your system should then continue with the boot up procedure Exit Discarding Changes Highlighting this setting and then pressing Enter will ignore any changes you made in the BIOS Setup program and then exit Your system should then continue with the boot up procedure 7 27 SUPERSERVER 6041G Manual Load Optimal Defaults Highlighting this setting and then pressing lt Enter gt provides the optimum performance settings for all devices and system features Load Failsafe Defaults Highlighting this setting and then pressing lt Enter gt provides the safest set of parameters for the system Use them if the system is behaving errati cally Discard Changes Highlighting this setting and then pressing lt Enter gt will ignore any changes you made in the BIOS Setup program but will not exit the BIOS Setup pro gram 7 28 Appendix A BIOS Error Beep Codes Appendix A BIOS Error Beep Codes amp Messages During the POST Power On Self Test routines which are performed each time the system is powered on errors may occur Non fatal errors are those which in most cases allow the system to continue the boot up process The error messages normally appear on the screen Fatal errors are those which will not allow the system to continue the boot up pr
56. ent Enabled Green PC Monitor Power State StandBy Video Power Down Mode Suspend Hard Disk Power Down Mode Disabled Inactivity Timer Off Suspend Timeout Minutes Off IRQL Monitor IRQ3 Ignore IRQA Ignore IRQ5 Ignore IRQ6 Ignore L IRQ7 Ignore d IRQ9 Ignore Fl IRQ10 Ignore IRQ11 Ignore IRQ12 Monitor IRQ14 Monitor IRQ15 Ignore Select Screen Select Item Change Option General Help F10 Save and Exit ESC Exit V07 00 C Copyright 1985 2001 American Megatrends Inc 7 20 Chapter 7 BIOS ACPI Aware O S This option allows the system to utilize Intel s ACPI Advanced Configuration and Power Interface specification Settings are No and Yes DOSO Windows 3 x8 and Windows NT are examples of non ACPI aware oper ating systems Windows 956 Windows 988 Windows MEG and Windows 20006 are examples of ACPI aware operating systems Power Management This option allows you to select using APM Advanced Power Manage ment The settings are Disabled and Enabled Green PC Monitor Power State This option specifies the power state that a green PC compliant monitor enters when BIOS places it in a power saving state after the specified period of display inactivity has expired The settings include Standby Suspend and Off Video Power Down Mode This option specifies the power state that the VGA video subsystem enters after the specified period of display inactivity has expired The settings include Disable
57. ette Snooping When enabled this option informs PCI devices that an ISA graphics device is installed The settings are Disabled and Enabled This does not neces sarily indicate a physical ISA adapter card The graphics chipset can be mounted on a PCI card Always check with your adapter card manuals first before modifying the default settings in the BIOS PCI IDE BusMaster The settings for this option are Disabled and Enabled Enable to specify that the IDE controller on the PCI bus has bus mastering capabilities USB Function The settings for this option are Disabled and Enabled Disabled prevents the use of the USB ports and Enabled allows the use of the USB ports IRQ3 IRQ 4 IRQ5 IRQ 7 IRQ 9 IRQ 10 IRQ 11 IRQ 14 IRQ 15 The settings for the above options are Available and Reserved Available allows the specified IRQ to be available for use by PCI PnP devices Re served means the specified IRQ is reserved for use by Legacy ISA de vices 7 19 SUPERSERVER 6041G Manual Reserved Memory Size This option specifies the size of a memory area to be reserved for Legacy ISA adapter cards The settings are Disabled 16k 32k and 64k 7 7 Power Setup Choose Power Setup from the AMIBIOS Setup main menu All Power Setup options are described in this section The Power Setup screen is shown below BIOS SETUP UTILITY Main Advanced Chipset PCIPnP Power Boot Security Exit ACPI Aware O S Yes Power Managem
58. ettings Closed SMH VGA Enable Disable VGA Enable Disable Jumper Settings JP68 Use jumper JP68 to enable or dis Jumper able the VGA port Refer to the Position Definition o table on the right for jumper set Diss tings 5 23 SUPERSERVER 6041G Manual 5 11 Parallel Port Floppy Hard Disk Drive and SCSI Connections Use the following information to connect the floppy and hard disk drive cables The floppy disk drive cable has seven twisted wires Ared mark on a wire typically designates the location of pin 1 Asingle floppy disk drive ribbon cable has 34 wires and two connectors to provide for two floppy disk drives The connector with twisted wires always connects to drive A and the connector that does not have twisted wires always connects to drive B Parallel Printer Port Pin Definitions J16 Pin Number Function Pin Number Function 1 Strobe 2 Auto Feed 3 Data BitO 4 Errors Parallel Port Connector 5 Data Bit 1 6 Init 7 Data Bit 2 8 SLCT IN 9 Data Bit3 10 GND M DIR Bird a END The parallel port is located on J16 18 Data Bit5 14 GND and requires a 26 pin ribbon cable 15 Data Bit6 16 GND 17 DataBit7 18 GND for operation See the table on the 19 ACK 20 GND 1 RPM a1 BUSY 25 GNE left for pin definitions 23 PE 24 GND 25 SLCT 26 NC Floppy Connector Floppy Connector Pin Definitions J15 Pin Number Function Pin Number Function 1 GN
59. fication BBS The set tings are Enabled and Disabled 7 24 Chapter 7 BIOS 7 9 Security Setup Choose Security Setup from the AMIBIOS Setup main menu All Security Setup options are described in this section The Security Setup screen is shown below BIOS SETUP UTILITY Main Advanced Chipset PCIPnP Power Boot Security Exit Install or Change the Supervisor Password Not Installed password User Password E Not Installed gt gt gt Change Supervisor Password Change User Password Clear User Password Boot Sector Virus Protection Disabled Select Screen Select Item Go to Sub Scree General Help Save and Exit Exit V02 03 C Copyright 1985 2000 American Megatrends Inc Supervisor Password User Password AMIBIOS provides both Supervisor and User password functions If you use both passwords the Supervisor password must be set first The sys tem can be configured so that all users must enter a password every time the system boots or when AMIBIOS Setup is executed using either or both the Supervisor password or User password The Supervisor and User passwords activate two different levels of password security If you select password support you are prompted for a 1 6 character password Type the password on the keyboard The password does not appear on the screen when typed Make sure you write it down If you forget it you must clear CMOS and reconfigure Remember your Password Keep a recor
60. flash ROM Next erasing the flash ROM Next programming the flash ROM Flash ROM programming was successful Next restarting the system BIOS B 3 Uncompressed Initialization Codes The following runtime checkpoint codes are listed in order of execution These codes are uncompressed in F0000h shadow RAM Checkpoint 03h 05h 06h 07h 08h OAh OBh OCh OEh OFh 10h Code Description The NMI is disabled Next checking for a soft reset or a power on condition The BIOS stack has been built Next disabling cache memory Uncompressing the POST code next Next initializing the CPU and the CPU data area The CMOS checksum calculation is done next The CMOS checksum calculation is done Initializing the CMOS status register for date and time next The CMOS status register is initialized Next performing any required initialization before the keyboard BAT command is issued The keyboard controller input buffer is free Next issuing the BAT command to the keyboard controller The keyboard controller BAT command result has been verified Next performing any necessary initialization after the keyboard controller BAT command test The initialization after the keyboard controller BAT command test is done The keyboard command byte is written next The keyboard controller command byte is written Next issuing the Pin 23 and 24 blocking and unblocking command B 2 Appendix B AMIBIOS POST Diagnostic Error Messages
61. formation on the 4U rackmount server chassis You should follow the procedures given in this chapter when installing removing or reconfiguring SCSI or peripheral drives and when replacing system power supply units and cooling fans Chapter 7 BIOS The BIOS chapter includes an introduction to BIOS and provides detailed information on running the CMOS Setup Utility Appendix A BIOS Error Beep Codes and Messages Appendix B POST Diagnostic Error Messages Appendix C List of Figures Appendix D System Specifications Preface SOul uuo ISOS 3aysuod O I sBumes Jeduinf S8u9IMS did SJ0 j2euu02 1no e gig SPJBD 9d sq daw soaeds uieis gS Kjddng 418m0d Su OF Sq31 Aids umd uolye e Su seinDiJ jo 1s su Aeg e uq uorelreisu ndo SQqd1lS9S yey Oju 1oejuot sebessayy dnieg Buluuny sueJ ulajs S se qe5 s dS3 SG Ud MUD ams pueoquieyy J0413 Heq 1s0g 18S sounjes4 SOIG eued JOWUOD uonejeisu gN Reyes Je3euoe SOYOUMS suolnedeid sISSeYyO sapon deeg sold uogonpogu SANISUBS OBIS ay su oes fieles e991 MOSIAJOAQ MOIAIGAQ MOSIAJOAQ eunnog dnjes seq sjleyoq Ayayes o2ejlolu seojpueddy pue solig SISSeu2 paeoqJau1oN uiejs s uiejs s uonejjelsu uononpodu a 9 g y ddy dyo 9du5 sdu5 vyduo du5 zdyo dyo uoneziuebic enuen SUPERSERVER 6041G Manual Table of Contents Preface About This Marilal cip tenete dod a bekennen iii Manual Organization aseissa Eo edi diane nas iii Manual
62. g after WINBIOS Setup next The programming after WINBIOS Setup has completed Displaying the power on screen message next The first screen message has been displayed The WAIT message is displayed Performing the PS 2 mouse check and extended BIOS data area allocation check next Programming the WINBIOS Setup options next The WINBIOS Setup options are programmed Resetting the hard disk controller next The hard disk controller has been reset Configuring the floppy drive controller next The floppy drive controller has been configured Configuring the hard disk drive controller next Initializing the bus option ROMs from C800 next See the last page of this chapter for additional information Initializing before passing control to the adaptor ROM at C800 Initialization before the C800 adaptor ROM gains control has com pleted The adaptor ROM check is next The adaptor ROM had control and has now returned control to BIOS POST Performing any required processing after the option ROM returned control Any initialization required after the option ROM test has completed Configuring the timer data area and printer base address next Set the timer and printer base addresses Setting the RS 232 base address next Returned after setting the RS 232 base address Performing any required initialization before the Coprocessor test next Required initialization before the Coprocessor test is over Initializing the Coprocessor next Cop
63. h support Intel FCPGA processors Lift the lever on the socket and insert the processor with the notched corner oriented toward pin one on the socket Make sure the processor is fully seated in the socket and and then close the lever You can also install a single 370 pin CPU in CPU Socket 1 without changing any jumper settings See Figure 5 3 for views of the 370 pin socket before and after processor installation Mounting the Motherboard in the Chassis All motherboards have standard mounting holes to fit different types of chassis Make sure the location of all the mounting holes for both the motherboard and the chassis match Although a chassis may have both plastic and metal mounting fasteners metal ones are highly recommended because they ground the motherboard to the chassis Make sure the metal standoffs click in or are screwed in tightly Then use a screwdriver to secure the motherboard onto the motherboard tray 5 7 SUPERSERVER 6041G Manual 5 4 370 pin Socket Empty and with Processor Installed Removing Pentium III 370 pin Processors To remove the Pentium III 370 pin processors from the motherboard follow the installation process in reverse order When removing a Pentium III 370 pin processor avoid AN pressing down on the motherboard or any of its compo nents 5 8 Chapter 5 Advanced Motherboard Setup 5 6 Installing DIMMs CAUTION Exercise extreme care when installing or removing AN DIMM modu
64. ight for pin definitions 1 DB 12 35 DB 12 of the Ultra160 SCSI 2 DB 13 36 DB 13 3 DB 14 37 DB 14 connectors located at 4 DB 15 38 DB 15 JA1 JA3 and JAS 5 DB P1 39 DB P1 6 DB 0 40 DB 0 7 DB 1 41 DB 1 8 DB 2 42 DB 2 9 DB 3 43 DB 3 10 DB 4 44 DB 4 11 DB 5 45 DB 5 12 DB 6 46 DB 6 13 DB 7 47 DB 7 14 DB P 48 DB P 15 GROUND 49 GROUND 16 DIFFSENS 50 GROUND 17 TERMPWR 51 TERMPWR 18 TERMPWR 52 TERMPWR 19 RESERVED 53 RESERVED 20 GROUND 54 GROUND 21 ATN 55 ATN 22 GROUND 56 GROUND 23 BSY 57 BSY 24 ACK 58 ACK 25 RST 59 RST 26 MSG 60 MSG 27 SEL 61 SEL 28 C D 62 C D 29 REQ 63 REQ 30 o 64 I O 31 DB 8 65 DB 8 32 DB 9 66 DB 9 33 DB 10 67 DB 10 34 DB 11 68 DB 11 5 25 SUPERSERVER 6041G Manual 5 12 IRQs Some PCI bus mastering devices share IRQs Interrupt Requests without performance penalties See the table below for details on shared IRQs IRQ Device IRQ 0 1 5V 64 bit 33MHz PCI slot 1 J7 IRQ 2 3 5V 64 bit 33MHz PCI slot 2 J6 IRQ 4 5 5V 64 bit 33MHz PCI Slot 3 J8 IRQ 6 7 3 3V 64 bit 66 MHz PCI Slot 1 J11 IRQ 8 9 3 3V 64 bit 66 MHz PCI Slot 2 J10 IRQ 10 11 Onboard SCSI slot IRQ 12 13 5V 64 bit 33MHz PCI Slot 4 J9 IRQ 14 AGP slot IRQ 15 Onboard LAN slot 5 26 Chapter 6 Advanced Chassis Setup Chapter 6 Advanced Chassis Setup This chapter covers the s
65. ime Please read this section in its entirety before you begin the installation procedure outlined in the sections that follow 2 1 SUPERSERVER 6041G Manual Choosing a Setup Location Leave enough clearance in front of the rack to enable you to open the front door completely 25 inches Leave approximately 30 inches of clearance in the back of the rack to allow for sufficient airflow and ease in servicing This product is for installation only in a Restricted Access Location dedicated equipment rooms service closets etc VAN Warnings and Precautions ZN Rack Precautions Ensure that the leveling jacks on the bottom of the rack are fully extended to the floor with the full weight of the rack resting on them In single rack installation stabilizers should be attached to the rack n multiple rack installations the racks should be coupled together Always make sure the rack is stable before extending a component from the rack You should extend only one component at a time extending two or more simultaneously may cause the rack to become unstable Server Precautions Review the electrical and general safety precautions in Chapter 4 Determine the placement of each component in the rack before you install the rails Install the heaviest server components on the bottom of the rack first and then work up Use a regulating uninterruptible power supply UPS to protect the server from
66. ins 1 2 BIOS1 Off Enabled Pins 1 2 Enabled On 33 MHz On Enabled ATX POWER 2 BANKO BANK1 COM1 COM2 CPU1 CPU2 CPU CH OH FAN J13 J14 J15 J16 J18 JA1 JA3 JF1 JP52 JP54 JP63 LAN PWR SEC SLED1 USB WOL WOR Primary ATX Power Connector Secondary ATX Power Connector Memory RAM Slots COM1 COM2 Serial Port Connector CPU 1 and CPU2 Sockets CPU Chassis Overheat Fan Headers IDE Hard Disk Drive Connectors Floppy Disk Drive Connector Parallel Printer Port PS 2 Keyboard Mouse Ports Ultra160 LVD SCSI CH A Connector Ultra160 LVD SCSI CH B Connector Front Control Panel Connector Chassis Intrusion Header Third Power Supply Fail Header NMI Non Maskable Interrupt Header Ethernet Port Secondary ATX Power Connector SCSI Active LED header Universal Serial Bus Ports Wake on LAN Header Wake on Ring Header 5 13 SUPERSERVER 6041G Manual 5 8 Connector Definitions ATX Power Supply Connector Pin Definitions Power Supply Connector Pin Number Definition Pin Number Definition 1 3 3V 11 3 3V 2 3 3V3 12 12V After you have mounted the moth 3 Ground 18 Ground 4 5V 14 PS ON erboard and added memory and 5 Ground 15 Ground 6 5V 16 Ground PCI cards you are ready to con 7 Goiri 1 d nect the cables Attach an ATX 8 PW OK 18 5V 9 5VSB 19 5V power supply cable to ATX 1 10 12V 20 5V See the table on the right for the pin definitions of these ATX power supply connectors Seco
67. ister test passed Programming DMA controllers 1 and 2 next Completed programming DMA controllers 1 and2 Initializing the 8259 interrupt controller next Completed 8259 interrupt controller initialization Extended NMI source enabling is in progress The keyboard test has started Clearing the output buffer and checking for stuck keys Issuing the keyboard reset command next A keyboard reset error or stuck key was found Issuing the keyboard controller interface test command next The keyboard controller interface test completed Writing the com mand byte and initializing the circular buffer next The command byte was written and global data initialization has completed Checking for a locked key next Locked key checking is over Checking for a memory size mismatch with CMOS RAM data next The memory size check is done Displaying a soft error and checking for a password or bypassing WINBIOS Setup next The password was checked Performing any required programming before WINBIOS Setup next B 5 SUPERSERVER 6041G Manual Checkpoint 87h 88h 89h 8Bh 8Ch 8Dh 8Fh 91h 95h 96h 97h 98h 99h 9Ah 9Bh 9Ch 9Dh 9Eh A2h A3h Code Description The programming before WINBIOS Setup has completed Uncompressing the WINBIOS Setup code and executing the AMIBIOS Setup or WINBIOS Setup utility next Returned from WINBIOS Setup and cleared the screen Performing any necessary programmin
68. les to prevent any possible damage Also note that the memory is interleaved to improve performance see step 1 DIMM Installation See Figure 5 4 1 Insert either two or four DIMMs as required for the desired system memory Two way interleaved memory requires that memory modules be installed in pairs first in the two slots of BankO and then in both slots of Bank if needed 2 Insert each DIMM module vertically into its slot Pay attention to the two notches along the bottom of the module to prevent inserting the DIMM mod ule incorrectly 3 Gently press down on the DIMM module until it snaps into place in the slot Repeat for all modules see step 1 above Support The PSTDE6 only supports ECC registered SDRAM memory PC133 and PC100 memory are both supported at their respective speeds However the memory speed is synchronized with CPU s front side bus speed Iherefore the FSB of the CPU will determine the memory speed Figure 5 5 DIMM Installation PC100 PC100 4 Notches L Notches Note Notches should align with the receptive points on the slot To Install Insert module vertically and press down until it snaps into place Pay attention to the notches 5 9 SUPERSERVER 6041G Manual To Remove Use your thumbs to gently push near the edge of both ends of the module This should release it from the slot Top View of DIMM Slot 5 7 Adding PCI Cards 1 64 bi
69. m Speaker gap oid and Buzzer i HH HH Pw o X Control Panel LEDs Control Panel Switches EE Figure 6 2 Control Panel PCB Fan Headers Fan designations are provided on the PCB FAN1 cools the I O section of the chassis FAN2 cools the AGP Pro and memory areas FANS directs cooling air to Processors FAN4 directs cooling air to the system and the Drive Bays FANS is the exhaust fan FANS is on the right when viewed from the rear Fan LEDs The red LEDs by each fan header turn on when the fan it corresponds to has failed Jumpers JP8 can be jumped to reset the microcontroller on the PCB JP11 can be jumped to lock the keyboard JP21 disables the power fail alarm if only two power supplies are used Headers JP10 connects to the SCA backplane to sense for overheating 6 3 SUPERSERVER 6041G Manual Fan Power Override Switch Turn this switch ON to manually supply power to the system fans The default setting for this switch is OFF The system cooling fans normally run at 80 of their maximum RPM to allow for this backup compensation and promote fan life Turning the fan power override switch to ON overrides the 80 RPM feature to make all fans run at their 100 RPM rate The microcontroller will continue to monitor for any fan failure when this switch is turned on You should do this if you want to suppl
70. ment 0 and control will be transferred to segment 0 Control is in segment 0 Next checking if Ctrl Home was pressed and verifying the system BIOS checksum If either Ctrl Home was pressed or the system BIOS checksum is bad next will go to checkpoint code EOh Otherwise going to checkpoint code D7h B 2 Bootblock Recovery Codes The bootblock recovery checkpoint codes are listed in order of execution Checkpoint EOh Eth E2h E6h Edh Code Description The onboard floppy controller if available is initialized Next beginning the base 512 KB memory test Initializing the interrupt vector table next Initializing the DMA and Interrupt controllers next Enabling the floppy drive controller and Timer IRQs Enabling internal cache memory Initializing the floppy drive B 1 SUPERSERVER 6041G Manual Eeh Efh FOh Fih F2h F3h F4h F5h FBh FCh FDh FFh Looking for a floppy diskette in drive A Reading the first sector of the diskette A read error occurred while reading the floppy drive in drive A Next searching for the AMIBOOT ROM file in the root directory The AMIBOOT ROM file is not in the root directory Next reading and analyzing the floppy diskette FAT to find the clusters occupied by the AMIBOOT ROM file Next reading the AMIBOOT ROM file cluster by cluster The AMIBOOT ROM file is not the correct size Next disabling internal cache memory Next detecting the type of
71. n screws that secure the unit to the rack Next release the two thumbscrews that secure the top cover to the chassis Grasp the two handles on either side and pull the unit straight out until it locks you will hear a click There are two square recesses in the top cover to help you push the cover away from you until it stops You can then lift the top cover from the chassis You now have full access to the inside of the server 2 Check the CPUs processors You should have one or two processors fully inserted into the system board If one CPU is used install the CPU into CPU Socket 1 see Chapter 5 Inadequte ventilation or improper installation of the CPU heat sinks may result in the instability of the system When installing the heat sinks use the proper type of thermal glue and apply the proper amount of thermal glue on the die of the CPU improper type or amount of thermal glue used on the die of the CPU and improper installation of the heat sink may result in the crash of the system 3 Verify the proper CPU core bus ratio setting You need to verify that the CPU core bus ratio as set with DIP Switch 1 matches the speed of your installed processors This DIP Switch is defaulted to 5 5 which corresponds to 550 MHz processors running on a 100 MHz front side bus FSB If the setting is different or if you are using processors of a different speed you may need to change this setting 4 Check all cable connections and airflow Make sur
72. n the control panel 3 4 Chapter 4 System Safety Chapter 4 System Safety 4 1 Electrical Safety Precautions A Basic electrical safety precautions should be followed to protect yourself from harm and the SuperServer6041G from damage Be aware of the locations of the power on off switch on the chassis as well as the room s emergency power off switch disconnection switch or electrical outlet If an electrical accident occurs you can then quickly remove power from the system Do not work alone when working with high voltage components Power should always be disconnected from the system when removing or installing main system components such as the motherboard memory modules and IDE and floppy drives When disconnecting power you should first power down the system with the operating system first and then unplug the power cords of all the power supply units in the system When working around exposed electrical circuits another person who is familiar with the power off controls should be nearby to switch off the power if necessary Use only one hand when working with powered on electrical equipment This is to avoid making a complete circuit which will cause electrical shock Use extreme caution when using metal tools which can easily damage any electrical components or circuit boards they come into contact with Do not use mats designed to decrease static electrical discharge as protection from electric
73. ndary Power Connector Secondary Power Connector J19 Pin Use of the secondary power con Number Definition nector at J19 is recommended ple round when a heavy load of peripherals 3 Ground 4 3 3V has been added to the mother 5 ipo board See the table at right for 8 so VAkeyed pin definitions Note Be sure to use a 6 pin connector and check the power supply lay out before making the connection Power Button PWR ON Connector The Power Button connection is Pin Definitions located on pins 1 and 2 of JF2 BR uis Momentarily contacting both pins Number Definition will power on off the system The E onu user can also configure this but ton to function as a suspend but ton see the Power Button Mode setting in BIOS To turn off the power when set to suspend mode hold down the power button for at least 4 seconds See Figure 5 2 for pin definitions See the table on the right for pin definitions on JF1 PWR ON 5 14 Chapter 5 Advanced Motherboard Setup Reset The Reset connection is located on pins 3 and 4 of JF2 This con nector attaches to the hardware reset switch on the computer case See Figure 5 2 for pin defi nitions See the table on the right for pin definitions on JF1 Power Fail LED PFL The Power Fail LED connection is located on pins 5 and 6 of JF2 See Figure 5 2 for pin definitions See the table on the right for pin definitions on JF1 Overheat
74. not wear loose clothing such as neckties and unbuttoned shirt sleeves which can come into contact with electrical circuits or be pulled into the one of the cooling fans Remove any jewelry or metal objects from your body which are excellent metal conductors that can create short circuits and harm you if they come into contact with printed circuit boards or areas where power is present After accessing the inside of the system close the system back up and secure it to the rack unit with the retention screws after ensuring that all connections have been made 4 2 Chapter 4 System Safety 4 3 ESD Precautions A Electrostatic discharge ESD is generated by two objects with different electrical charges coming into contact with each other An electrical discharge is created to neutralize this difference which can damage electronic components and printed circuit boards The following measures are generally sufficient to neutralize this difference before contact is made to protect your equipment from ESD Use a grounded wrist strap designed to prevent static discharge Keep all components and printed circuit boards PCBs in their antistatic bags until ready for use Touch a grounded metal object before removing the board from the antistatic bag Do not let components or PCBs come into contact with your clothing which may retain a charge even if you are wearing a wrist strap Handle a board by it
75. ns the first step of physically mounting the P3TDE6 into the SC840 chassis Following the steps in the order given will eliminate the most common problems encountered in such an installation To remove the motherboard follow the procedure in reverse order Access the inside of the 6041G see Figure 2 5 First release the two retention screws that secure the unit to the rack Grasp the two handles on either side and pull the unit straight out Next release the two screws that secure the top cover to the chassis Remove the top chassis cover by pushing forward on the cover recesses until it stops Lift the cover from the chassis You should now have full access to the inside of the server Install metal standoffs With the chassis opened up the motherboard tray is directly in front of you First check that the location of all the mounting holes on both the motherboard and the tray match Refer to Figure 5 1 for mounting hole locations Attach metal standoffs to the mounting holes as marked 1 13 on Figure 5 1 on the motherboard tray Make sure these metal standoffs either click in or are screwed in tightly Several square rubber feet may be applied to the motherboard tray to function as shock absorbers Attach these feet to the small square outlines on the tray Check compatibility of motherboard ports and I O shield The P3TDE6 requires a chassis big enough to support a 12 x 13 motherboard such as Supermicro s SC840 4U rackmount Make
76. oard WED i iere bee aii 3 4 Chapter 4 System Safety 4 1 Electrical Safety Precautions ssesssseseseeeeeeeneneenennee 4 1 4 2 General Safety Precaulions ee de Ce ege ey 4 2 4 3 ESD Precautions sssssssssssssssssseeenennee nennen nne nnne tnnt 4 3 Chapter 5 Advanced Motherboard Setup 5 1 Handling the PSTDE6 Motherboard 5 2 Motherboard Installation eer ertt neret entere 5 3 vGontectirng Cables seene aa e sty sthceueucs cabs ez ss ee ecqenuseseun S Connecting Data Cables innocenter tad Connecting Power Cables tee tees Connecting the Control Panel 5 tec 5 4 Port Control Panel Connector Locations sseee 5 6 5 5 Processor Installation sists itr e s ti Ere Ee EE nea 5 7 Removing Pentium IIl 370 pin Processors esee 5 8 5 6 Installing DIMMs 5 7 Adding POI GCaldscn ace tnn perte ii Pres 5 10 Super P3TDED LayoUut tet ner traiter eet eco dites 5 12 P3TDE6 Quick Heference i Hr tte tege 5 13 5 8 Connector Definitions essssssseseeeeeenenemneee nennen 5 14 Power Supply Connectors uon reete 5 14 Secondary Power Connector erecta e 5 14 Power BUON iuri ra e dere e ne erede Power Fail LED Overheat LED eicere trn ere tege E irren erba NIGTIBED rei a rettet El ntes ie HDD IDE TEED 0 coercet Rete erinnern aire eden enata pas Power LED SUPERSERVER 6041G Manual Speak6I i
77. ocedure f a fatal error occurs you should consult with your system manufacturer for possible repairs These fatal errors are usually communicated through a series of audible beeps The numbers on the fatal error list on the following page correspond to the number of beeps for the corresponding error All errors listed with the exception of Beep Code 8 are fatal errors A 1 SUPERSERVER 6041G Manual AMI BIOS Error Beep Codes Beep Error Message Description Code 1 beep Refresh The memory refresh circuitry on the motherboard is faulty 2 beeps BIOS ROM file The BIOS was unable to find absent the specific file name required to flash the BIOS 3 beeps Base 64KB Memory failure occurred in the memory failure first 64KB of Memory 4 beeps Flash program The flash was properly successful programmed with the BIOS ROM file 5 beeps Media read error The floppy or ATAPI media is not presented or cannot be read 6 beeps Keyboard The keyboard controller may controller Gate be bad The BIOS cannot A20 failure Switch to protected mode 7 beeps Processor The CPU generated an exception exception interrupt interrupt error 8 beeps Display memory The system video adapter is read write error either missing or its memory is faulty This is not a fatal error 10 beeps Flash erase error The flash device was unable to be properly programmed 11 beeps Flash program The flash device was una
78. of IDE devices The settings for Secondary IDE Slave are the same as those for the Primary IDE Master Hard Disk Write Protect This item allows the user to prevent the hard disk from being overwritten The options are Enabled or Disabled Enabled allows the drive to be used normally read write and erase functions can all be performed Disabled prevents the hard disk from being erased This function is effective only when the device is accessed through BIOS ATA PI Detect Timeout Second Set this option to stop the system search for ATAPI devices within the specified number of seconds The options are 0 5 10 15 20 25 30 and 35 seconds Most ATA disk drives can be detected within 5 seconds 7 9 SUPERSERVER 6041G Manual Floppy Configuration Floppy A Use this option to specify which of floppy drive you have installed in the A drive The settings are Disabled 360 KB 5 1 4 1 2 MB 5 1 4 720 KB 3 1 2 1 44 MB 3 1 2 and 2 88 MB 3 1 2 Floppy B Use this option to specify which of floppy drive you have installed in the B drive The settings are Disabled 360 KB 5 1 4 1 2 MB 5 1 4 720 KB 3 1 2 1 44 MB 3 1 2 and 2 88 MB 3 1 2 Diskette Write Protect This option allows you to prevent any writing to your floppy diskette The settings are Disabled 360 KB 5 1 4 1 2 MB 5 1 4 720 KB 3 1 2 1 44 MB 3 1 2 and 2 88 MB 3 1 2 The Enabled setting is effective only if the device is accessed through BIOS
79. ol panel provides comprehensive system monitoring and control LEDs indicate network activity power sup ply failure fan failure fan status SCSI drive activity and failure and SCA backplane overheat conditions The control panel also includes a main power button a system reset button and an alarm reset switch l O Shield The SC840 is a 4U rackmount chassis Its I O shield provides seven moth erboard expansion slots two COM ports a parallel port two USB ports PS 2 mouse and keyboard ports and an Ethernet port See Figure 1 1 Sound holes not present on the 6041 Figure 1 1 I O Shield Cooling System The SC840 chassis has an innovative cooling design that includes four 9 cm hot plug system cooling intake fans and one 9 cm hot plug exhaust fan All system fans operate continuously to provide optimal cooling for add on cards memory and processors If one fails an alarm is activated and the RPM of the remaining fans increase to compensate and maintain suffi cient airflow 1 8 SUPERSERVER 6041G Manual 1 3 Mainboard Features At the heart of the SuperServer 6041G lies the P3TDE6 a dual processor motherboard designed to provide maximum performance in a two way sys tem Below are the main features of the PSTDE6 Processors The P3TDE6 supports dual Pentium III 500 1 26 GHz MHz 100 133 MHz FSB processors Please refer to the support section of our we
80. oot Device Priority Hard Disk Drives Removable Devices ATAPI CDROM Drives o Select Screen N Select Item Enter Go to Sub Scree F1 General Help F10 Save and Exit ESC Exit V02 03 C Copyright 1985 2000 American Megatrends Inc Boot Device Priority 1st Boot Device This option is used to specify the order of the boot sequence that will be followed from the available system devices The settings for the 1st Boot Device are Removable Device ATAPI CDROM Hard Drive Intel UNDI PX 2 and Disabled 2nd Boot Device The settings for the 2nd Boot Device are Removable Device ATAPI CDROM Hard Drive Intel UNDI PX 2 and Disabled 7 23 SUPERSERVER 6041G Manual 3rd Boot Device The settings for the 3rd Boot Device are Removable Device ATAPI CDROM Hard Drive Intel UNDI PX 2 and Disabled 4th Boot Device The settings for the 3rd Boot Device are Removable Device ATAPI CDROM Hard Drive Intel UNDI PX 2 and Disabled Hard Disk Drives Use this screen to view the boot sequency of hard drives that have been auto detected or entered manually on your system Removable Devices Use this screen to view the boot sequency of the removeable devices that have been auto detected or entered manually on your system ATAPI CDROM Drives Use this screen to view the boot sequency ofthe ATAPI CDROM drives that have been auto detected or entered manually on your system BBS Support This option allows you to set the BIOS Boot Speci
81. options i e Discard Changes 7 3 SUPERSERVER 6041G Manual 7 4 Advanced BIOS Setup Choose Advanced BIOS Setup from the AMIBIOS Setup Utility main menu with the Left Right arrow keys You should see the following display Select one of the items in the left frame of the screen such as SuperlO Configuration to go to the sub screen for that item Advanced BIOS Setup options are displayed by highlighting the option using the arrow keys All Advanced BIOS Setup options are described in this section BIOS SETUP UTILITY Main Advanced Chipset PCIPnP Power Boot Security Exit Setup Warning Configure SuperIO Setting items on this screen to incorrect values Chipset Winbond627F may cause the system to malfunction SuperIO Configuration IDE Configuration Floppy Configuration Boot Settings Configuration Event Log Configuration Peripheral Device Configuration System Health Monitor Remote Acccess gt gt gt gt gt gt gt gt 4 Select Screen N select Item Enter Go to Sub Screen F1 General Help F10 Save and Exit ESC Exit V7 00 C Copyright 1985 2001 American Megatrends Inc Use the Up Down arrow keys to select the Super I O Configuration line When the Super IO Configuration line is highlighted hit ENTER to display its menu The following Super IO Configuration screen will appear Here you can select your options for the your computer s I O Input Output devices 74 Chapter 7 BIOS
82. or instructions Note Only a slim CD ROM drive will fit in the 840 chassis 6 6 Chapter 6 Advanced Chassis Setup SCSI Drive Installation Mounting a SCSI drive in a drive carrier The SCSI drives are mounted in drive carriers to simplify their installation and removal from the chassis These carriers also help promote proper airflow for the SCSI drive bays For this reason even empty carriers without SCSI drives installed must remain in the chassis To add a new SCSI drive install a drive into the carrier with the printed circuit board side toward the carrier so that the mounting holes align with those in the carrier Secure the drive to the carrier with four screws as shown in Figure 6 4 Figure 6 4 Mounting a SCSI Drive in a Carrier Use caution when working around the SCSI backplane AN Do not touch the backplane with any metal objects and make sure no ribbon cables touch the backplane or obstruct the holes which aid in proper airflow are installed both SCSI drive carriers must remain in Important Regardless of how many SCSI hard drives A the drive bays for proper airflow 6 7 SUPERSERVER 6041G Manual Installing removing hot swap SCSI drives Four SCSI drive bays are located in the front of the chassis making them easily accessible to install and remove The SCSI drives can be removed and installed without powering down the system hot swap To remove first push the release button located besi
83. ould also have received this User s Manual and several Supermicro diskettes which contains various drivers and utilities 1 1 SUPERSERVER 6041G Manual 1 2 Server Chassis Features The SuperServer 6041G is a high end scaleable 4U rackmount server plat form designed with today s most state of the art features The following is a general outline of the main features of the SC860 chassis System Power A dual redundant power supply system consisting of two 300W units to provide 300W of continuous power with 300W of backup This dual re dundant power supply system can be upgraded to a triple redundant sys tem If any one of the two power units fail you will be notified by alarm and LED and the backup unit will automatically activate These are hot plug units that can be replaced without powering down the system SCSI Subsystem The SCSI subsystem supports 4 68 pin SCA Ultrai60 SCSI hard drives Any standard 1 drives are supported SCA Single Connection Attach ment The SCSI drives are connected to a SAF TE compliant SCA backplane that provides power bus termination and configuration settings The SCSI drives are also hot swap units A RAID controller card can be used with the SCA backplanes to provide data security Note The operating system you use must have RAID support to enable the hot swap capability of the SCSI drives 1 2 Chapter 1 Introduction Control Panel The SuperServer 6041G s detailed contr
84. ounting holes before inserting screws into the holes 5 3 SUPERSERVER 6041G Manual 5 3 Connecting Cables Now that the motherboard is installed the next step is to connect the cables to the board These include the data ribbon cables for the peripherals and front control panel the power fail signal PWR P cable and the power cables Connecting Data Cables The ribbon cables used to transfer data from the peripheral devices have been carefully routed to prevent them from blocking the flow of cooling air that moves through the system from front to back If you need to disconnect any of these cables you should take care to keep them routed as they were originally after reconnecting them make sure the red wires connect to the pin 1 locations The following data cables with their locations noted should be connected See the layout on page 5 12 for connector locations IDE Device Cables J13 and J14 Floppy Drive Cable J15 SCSI Device Cables JA2 JA4 and JP60 Control Panel Cable JF1 see next page Power Fail Signal Cable PWR P Connecting Power Cables The P3TDE6 has two primary power supply connectors ATX Power 1 and ATX Power 2 You must connect both the primary and the sec ondary ATX power connectors to your power supply See the layout on page 5 12 for connector locations 5 4 Chapter 5 Advanced Motherboard Setup Connecting the Control Panel The JF2 header on the P3TD
85. outed in such a way that they do not block the airflow generated by the fans 5 Supply power to the system The last thing you must do is supply power to the system Plug two or all three power cords from the two power supply units into a high quality power strip that offers protection from electrical noise and power surges It is recommended that you use an uninterruptible power supply UPS 2 9 SUPERSERVER 6041G Manual Notes Chapter 3 System Interface Chapter 3 System Interface 3 1 Overview There are several LEDs on the control panel as well as others on the power supply units the SCSI drive carriers and the motherboard to keep you con stantly informed of the overall status of the system as well as the activity and health of specific components There are also three switches that allow you to take action based on the information provided by these LEDs This chapter explains the meanings of all LED indicators and audible alarms and the appropriate response you may need to take 3 2 Control Panel Switches There are three push button switches located on the front of the chassis These are in order from left to right a power on off switch an alarm disable switch and a reset switch e POWER This is the main power switch which is used to apply or turn off the power supplied to the power supply units on the 6041G e ALARM Depressing the alarm switch will disable the audible alarm which is generated
86. power surges and voltage spikes and to keep your system operating in case of a power failure Allow the hot plug SCSI drives and power supply units to cool before touching them Always keep the rack s front door and all panels and components on the servers closed when not servicing to maintain proper cooling 2 2 Chapter 2 Server Installation 2 4 Installing the SuperServer 6041G into a Rack This section provides information on installing the SuperServer 6041G into a rack unit If the 6041G has already been mounted into a rack you can skip ahead to Sections 2 5 and 2 6 There are a variety of rack units on the market which may mean the assembly procedure will differ slightly The following is a guideline for installing the 6041G into a rack with the rack rails provided You should also refer to the installation instructions that came with the rack unit you are using Identifying the Sections of the Rack Rails You should have received two rack rail assemblies with the SuperServer 6041G Each of these assemblies consist of three sections an inner fixed chassis rail that secures to the 6041G A an outer fixed rack rail that secures directly to the rack itself B and a sliding rail guide C between the two which should remain attached to the fixed rack rail See Figure 2 1 which shows the chassis rail A already attached to the chassis The first thing you must do is to remove the fixed chassis rail A from each ass
87. rd System devices ISA devices EISA devices ISA PnP devices PCI devices B 8 Appendix C List of Figures Appendix C List of Figures The following is a list of the figures in this manual and the page numbers they appear on Figure Page I O Shield 1 3 Identifying the Sections of the Rack Rails 2 3 Installing the Chassis Rails 2 4 Installing the Rack Rails 2 5 Installing the Server into the Rack 2 6 Accessing the Inside of the SuperServer 6041G 2 8 Mounting Holes on Motherboard 5 3 Control Panel Connectors 5 5 I O Port Locations and Definitions 5 6 370 pin Socket Empty and with Processor Installed 5 8 DIMM Installation 5 9 10 Adding PCI Cards 5 10 SUPER P3TDE6 Layout 5 12 Chassis Front View 6 2 Control Panel PCB 6 3 System Cooling Fan Removal 6 5 Mounting a SCSI Drive in a Carrier 6 7 Removing SCSI Drives 6 8 SCA Backplane 6 9 Power Supplies 6 12 C 1 SUPERSERVER 6041G Manual Notes Appendix D System Specifications Appendix D System Specifications Processors Up to two Intel 370 pin Pentium III 600 MHz 1 26 GHz CPUs at a 133 100 MHz FSB Memory Capacity 4 DIMM slots to support a maximum of 4 GB Registered SDRAM DIMM Sizes 128 MB 256 MB 512 MB 1 GB Registered SDRAM modules supported SCSI Controller Adaptec AIC 7899W for dual channel Ultra160 SCSI SCSI Backplane Controller QLogic GEM354 controller for SAF TE compliant SCA backplane SCSI Drive Bays Four drive bays to ho
88. rocessor initialized Performing any required initialization after the Coprocessor test next Initialization after the Coprocessor test is complete Checking the extended keyboard keyboard ID and Num Lock key next Issuing the keyboard ID command next Displaying any soft errors next The soft error display has completed Setting the keyboard typematic rate next B 6 Appendix B AMIBIOS POST Diagnostic Error Messages Checkpoint A4h A5h A7h A8h A9h Aah Abh BOh B1h 00h Code Description The keyboard typematic rate is set Programming the memory wait states next Memory wait state programming is over Clearing the screen and enabling parity and the NMI next NMI and parity enabled Performing any initialization required before passing control to the adaptor ROM at E000 next Initialization before passing control to the adaptor ROM at E000h completed Passing control to the adaptor ROM at E000h next Returned from adaptor ROM at E000h control Performing any initialization required after the E000 option ROM had control next Initialization after E000 option ROM control has completed Displaying the system configuration next Uncompressing the DMI data and executing DMI POST initialization next The system configuration is displayed Copying any code to specific areas Code copying to specific areas is done Passing control to INT 19h boot loader next B 7 SUPERSERVER 6041G Manual B 4 Bus Checkpoin
89. roller LBA Large Mode LBA Logical Block Addressing is a method of addressing data on a disk drive In LBA mode the maximum drive capac ity is 137 GB The settings are Disabled and Auto Select Disabled to disable LBA mode Select Auto to enable LBA mode if your device supports it and is not already formatted with the LBA mode Block Multi Sector Transfer Mode This option sets the block mode multi sector transfers option The settings include Disabled and Auto Disabled This op tion prevents the BIOS from using Multi Sector Transfer on the specified channel The data to and from the device will occur one sector at a time Auto This option allows the BIOS to auto detect device support for Multi Sector Trans fers on the specified channel If supported this option al lows the BIOS to auto detect the number of sectors per block for transfer from the hard disk drive to memory The data transfer to and from the device will occur multiple sectors at a time if the device supports it 7 7 SUPERSERVER 6041G Manual PIO Mode IDE PIO Programmable I O mode programs timing cycles be tween the IDE drive and the programmable IDE controller As the PIO mode increases the cycle time decreases The settings are Auto 0 1 2 3 and 4 DMA Mode This item allows the users to select the DMA mode The settings are Auto SWDMAO SWDMA1 SWDMA2 MWDMAO MWDMA1 MWDM2 UWDMAO UWDMA1 UWDMA2 UWDMA3 and UWDMA4 Select Auto to au
90. s If they are the power unit is probably bad 2 Remove the hot plug power unit See Figure 6 7 You do not need to power down the system to replace a failed power unit To remove the failed power unit push the locking tab on the failed unit up then grasp the handle and pull the unit completely out You don t need to unplug the power cable from the back of the chassis 3 Install a new hot plug power unit Replace the failed unit with another unit of the same wattage It is highly recommended that both power units are exactly the same Gently but firmly push the new unit all the way into the open bay Secure it by pushing the locking tab downward The green LED on the power supply unit should illuminate to show that it has power and is operational 6 11 SUPERSERVER 6041G Manual Figure 6 7 Power Supplies surermices 4Ac alo O e SuperServer 6041G E e E e S e a ma i mm amp Dal C amp CJ RI It pe lt a Power Supply Units 2 Dummy gt Status LED Locking Tab The power supply modules correspond with the AC power marked 1 2 3 below E LL J o o Dummy module upgradeable to a triple redundant power supply Push locking tab up and pull power unit out with handle Locking Chapter 7 BIOS 7 1 Chapter 7 BIOS
91. s edges only do not touch its components peripheral chips memory modules or contacts When handling chips or modules avoid touching their pins Put the motherboard and peripherals back into their antistatic bags when not in use For grounding purposes make sure your computer chassis provides excellent conductivity between the power supply the case the mounting fasteners and the motherboard 4 3 SUPERSERVER 6041G Manual 4 4 Operating Precautions A Care must be taken to assure that the chassis cover is in place when the 6041G is operating to assure proper cooling Out of warranty damage to the 6041G system can occur if this practice is not strictly followed Figure 4 1 Installing the Onboard Battery LITHIUM BATTERY LITHIUM BATTERY N BATTERY HOLDER BATTERY HOLDER 4 4 Chapter 5 Advanced Motherboard Setup Chapter 5 Advanced Motherboard Setup This chapter covers the steps required to install the P3TDE6 motherboard into the SC840 chassis connect the data and power cables and install add on cards All motherboard jumpers and connections are also described A layout and quick reference chart are on pages 5 10 and 5 11 Remember to completely close the chassis when you have finished working with the motherboard to better cool and protect the system Tools Required The only tools you will need to install the P83TDE6 into the chassis are a long and a short Philips screwdriver 5
92. stered ECC DIMM memory Manual Organization Chapter 1 Introduction The first chapter provides a checklist of the main components included with the server system and describes the main features of the P3TDE6 mainboard and the SC840 chassis which make up the SuperServer 6041G Chapter 2 Server Installation This chapter describes the steps necessary to install the SuperServer 6041G into a rack and check out the server configuration prior to powering up the system If your server was ordered without processor and memory components this chapter will refer you to the appropriate sections of the manual for their installation Chapter 3 System Interface Refer here for details on the system interface which includes the functions and information provided by the control panel on the chassis as well as other LEDs located throughout the system Chapter 4 System Safety You should thoroughly familiarize yourself with this chapter for a general overview of safety precautions that should be followed when installing and servicing the SuperServer 6041G SUPERSERVER 6041G Manual Chapter 5 Advanced Motherboard Setup Chapter 5 provides detailed information on the motherboard including the locations and functions of connections headers jumpers and IRQs Refer to this chapter when adding or removing processors or main memory and when reconfiguring the motherboard Chapter 6 Advanced Chassis Setup Refer to Chapter 6 for detailed in
93. sure that the I O ports on the motherboard properly align with their respective holes in the I O shield at the back of the chassis 5 2 Chapter 5 Advanced Motherboard Setup AN 6 Ly m jii fF H H o o f o 9 LI eL 1 S r ly o g p es JI E p FUE 81 B z Ql li Do a E E Le o ou wu i i ene eee ome T Number of motherboard mounting holes 13 Figure 5 1 Mounting Holes on Motherboard top view Mount the motherboard onto the motherboard tray Carefully mount the motherboard to the motherboard tray by aligning the board holes with the metal standoffs you just installed Insert screws into all the mounting holes provided and tighten until snug Note To prevent the screw heads from making direct contact with the MB traces which will create an electrical short you may place washers on top of the m
94. t Codes The system BIOS passes control to different buses at the following checkpoints Checkpoint 2Ah 38h 39h 95h Code Description Initializing the different bus system static and output devices if present Initialized bus input IPL and general devices if present Displaying bus initialization error messages if any Initializing bus adaptor ROMs from C8000h through D8000h Additional Bus Checkpoints While control is inside the different bus routines additional checkpoints are output to I O port address 0080h as word to identify the routines being executed These are word checkpoints The low byte of checkpoint is the system BIOS checkpoint where control is passed to the different bus routines The high byte of checkpoint indicates that the routine is being executed in Different buses High Byte The high byte of these checkpoints includes the following information Bits 7 4 0000 Function 0 0001 Function 1 0010 Function 2 0011 Function 3 0100 Function 4 0101 Function 5 0110 Function 6 0111 Function 7 Bits 3 0 arkwWN o Description Disable all devices on the bus Initialize static devices on the bus Initialize output devices on the bus Initialize input devices on the bus Initialize IPL devices on the bus Initiate general devices on the bus Initialize error reporting on the bus Initialize add on ROMS for all buses Specify the bus Generic DIM Device Initialization Manager Onboa
95. t PCI slots The P3TDE6 has six 64 bit PCI slots Two of these are 64 bit 66 MHz slots that are keyed to only accept 66 MHz 3 3V PCI cards The other four 64 bit 5V PCI slots also support 3 3V and run at 33MHz These four slots are fully compatible with 32 bit PCI devices 2 PCI card installation You are now ready to install your PCI add on cards Make sure you choose the correct slot for the type of card you are installing see Step 1 First remove the I O shield for the proper slot Then fully seat the card into the slot pushing down with your thumbs evenly on both sides of the card Finish by using a screw to secure the top of the card shield to the chassis The I O shields protect the motherboard and its compo nents from EMI electromagnetic interference and aid in proper ventilation so make sure there is a shield covering each slot Figure 5 6 Adding PCI Cards 5V 64 bit PCI Slots 4 3 3V 64 bit PCI Slots 2 CPU Sockets Chapter 5 Advanced Motherboard Setup Notes SUPERSERVER 6041G Manual Figure 5 7 SUPER P3TDE6 Layout not drawn to scale ATX POWER 1 PWR_SEC ATX POWER 2 J19 Ld O Speaker JP54 JP56 CO J15 JP55 mm JP52 POWER LED o lt 3 8I FLOPPY CHASSIS FAN OH FAN DIMM1 BANKO DIMM1 BANK1 DIMM2 BANKO DIMM2 BANK1 OH FAN CHASSIS FAN
96. teps required to install components and perform maintenance on the SC840 chassis For component installation follow the steps in the order given to eliminate the most common problems encountered If some steps are unnecessary skip ahead to the step that follows Tools Required The only tool you will need to install components and perform maintenance is a Philips screwdriver 6 1 Static Sensitive Devices Electric Static Discharge ESD can damage electronic components To prevent damage to any printed circuit boards PCBs it is important to handle them very carefully The following measures are generally suffi cient to protect your equipment from ESD Precautions Use a grounded wrist strap designed to prevent static discharge Touch a grounded metal object before removing any board from its anti static bag Handle a board by its edges only do not touch its components periph eral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the motherboard add on cards and peripherals back into their anti static bags when not in use For grounding purposes make sure your computer chassis provides ex cellent conductivity between the power supply the case the mounting fasteners and the motherboard Unpacking The motherboard is shipped in antistatic packaging to avoid static damage When unpacking the board make sure the person handling it is static pro t
97. to de tect the DMA Mode Select SWDMAO through SWDMA2 to set single word DMAO through DMA2 Select MWDMAO through MWDMA to set Multi word DMAO through DMA2 Select UDMAO trhough UDMA4 to set Ultra DMAO through Ultra DMA4 S M A R T S M A R T stands for Self Monitoring Analysis and Reporting Technology a feature that can help predict impending drive failures The settings are Auto Disabled and Enabled Select Enabled or Disabled to enable or disable the S M A R T Select Auto to auto detect S M A R T 32Bit Data Transfer The settings are Auto Disabled and Enabled Select En abled or Disabled to enable or disable the 32 bit Data Transfer function Select Auto to auto detect the 32 bit Data Transfer function ARMD Emulation Type This option is used to select the emulation used when config uring an LS120 MO Magneto Optical or lomega Zip drive The settings are Auto Floppy and HardDisk 7 8 Chapter 7 BIOS Primary IDE Slave When the system enters Setup BIOS automatically detects the presence of IDE devices This option displays the auto detection status of IDE de vices The settings for Primary IDE Slave are the same as those for the Primary IDE Master Secondary IDE Master This displays the status of auto detection of IDE devices The settings for Secondary IDE Master are the same as those for the Primary IDE Master Secondary IDE Slave This displays the status of auto detection
98. ty From the main menu you can access the other setup screens such as the Chipset and Power menus Section 4 3 gives detailed descriptions of each parameter setting in the Setup utility An AMIBIOS identification string is displayed at the left bottom corner of the screen below the copyright message 7 1 SUPERSERVER 6041G Manual 7 2 BIOS Features Supports Plug and Play V1 0A and DMI 2 3 Supports Intel PCI Peripheral Component Interconnect PME local bus specification 2 2 Supports Advanced Power Management APM specification v 1 1 Supports ACPI Supports Flash ROM AMIBIOS supports the LS120 drive made by Matsushita Kotobuki Electronics Industries Ltd The LS120 Can be used as a boot device Is accessible as the next available floppy drive AMIBIOS supports PC Health Monitoring chips When a failure occurs in a monitored activity AMIBIOS can sound an alarm and display a message The PC Health Monitoring chips monitor CPU temperature Chassis intrusion detector Five positive voltage inputs Four fan speed monitor inputs 7 3 Running Setup Optimal default settings are in bold text unless otherwise noted The BIOS setup options described in this section are selected by choosing the appropriate text from the Standard Setup screen All displayed text is described in this section although the screen display is often all you need to understand how to set the options see on next page 7 2
99. use two 2 standard 1 80 pin SCA SCSI drives Peripheral Bays One 1 3 5 floppy drive and one 1 slim CD ROM drive PCI Expansion Slots Two 2 64 bit 66 MHz and four 4 64 bit 33 MHz PCI slots Power Supply Type 2 x 300W redundant hot plug units with 3 3V 5V 12V 5V and 12V main DC outputs and a 5V standby output Input Voltage 120V or 240VAC with PFC Power Units are autoswitching capable Eans Each unit has one 80 mm ball bearing fan D 1 SUPERSERVER 6041G Manual Operating Environment Operating Temperature Range 10 to 35 degrees C Humidity Range 20 80 non condensing Safety Regulations CE UL CUL EMC EMI FCC part 15 CISPR 22 Cooling Fans System Four 4 9 cm hot plug ball bearing fans Exhaust One 1 9 cm ball bearing fans Onboard Fan Headers Two CPU three chassis and one overheat headers max current 035 amps ea or 1 2 amps set of four Form Factor P3TDE6 motherboard Extended ATX SC840 chassis 4U rackmount Operating Systems Supported Windows NT Windows 2000 Solaris Netware SCO UNIX and Linux Dimensions 17 52 x 6 97 x 25 99 in 445 x 177 x 660 mm W x H x D Weight Net 57 2 Ib 26 kg Gross 70 4 Ib 32 kg Regulatory Compliance Electromagnetic Emissions FCC Class B EN 55022 Class B EN 61000 3 2 3 3 CISPR 22 Class B Electromagnetic Immunity EN 55024 CISPR 24 EN 61000 4 2 EN 61000 4 3 EN 61000 4 4 EN 61000 4 5 EN 61000 4 6 EN 61000 4 8 EN 6
100. y maximum cooling to the system or if the microcontroller malfunc tions 6 3 System Fans Four 9 cm hot swap system cooling fans provide are located side by side between the motherboard bay and the front section of the chassis There are also one 9 cm exhaust fan which are located at the back of the chas Sis to pull the cool intake air through the system and force the hot air out System Fan Failure Under normal operation all six system fans run at 8096 of their maximum speed which supplies sufficient airflow while prolonging fan life If any fan fails the rest will automatically increase their RPM to a full 100 to compensate An audible alarm and an LED on the control panel will notify you of any fan failure You can disable the alarm with the alarm button on the control panel The system cooling fans are hot swap components which allows you to replace them without powering down the system Identifying the failed fan To determine which fan has failed first remove the top chassis cover You can then check the fan fail LEDs on the control panel s printed circuit board PCB which can be viewed through a cutout on its protective metal cover See the designation written by the red illuminated LED on the PCB to deter mine which fan has failed Figure 6 2 After determining whether it is a cooling or an exhaust fan and the number position you should refer to the following two sections for replacement 6 4 Chapter 6 Advanced Ch
101. y size display has started The display is updated during the memory test Performing the sequential and random memory test next The memory below 1 MB has been tested and initialized Adjusting the displayed memory size for relocation and shadowing next B 4 Appendix B AMIBIOS POST Diagnostic Error Messages Checkpoint 51h 52h 53h 54h 57h 58h 59h 60h 62h 65h 66h 67h 7Fh 80h 81h 82h 83h 84h 85h 86h Code Description The memory size display was adjusted for relocation and shadow ing Testing the memory above 1 MB next The memory above 1 MB has been tested and initialized Saving the memory size information next The memory size information and the CPU registers are saved Entering real mode next Shutdown was successful The CPU is in real mode Disabling the Gate A20 line parity and the NMI next The A20 address line parity and the NMI are disabled Adjusting the memory size depending on relocation and shadowing next The memory size was adjusted for relocation and shadowing Clearing the Hit DEL message next The Hit DEL message is cleared The WAIT message is displayed Starting the DMA and interrupt controller test next The DMA page register test passed Performing the DMA Controller 1 base register test next The DMA controller 1 base register test passed Performing the DMA controller 2 base register test next The DMA controller 2 base reg

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