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SuperMicro Super Server 6013PT (sys-6013p-t)

1. FILII 00 e seas ji E WOOO FT C Ks JC Jt j AC JG X J E JC AC JC Malo ft amp X Ho EXC CCS L ESSE SES 8p D Q iea i iee E e T pame Eu ni 7 SATA Drives System Reset Main Power Cadeau icu E O O M cies Lc Epoc E o Jo m ex J pee UU IIIa UAI o Q Figure 6 1 Chassis Front and Rear Views 6 2 Control Panel The control panel located on the front of the chassis must be connected to the JF2 connector on the serverboard to provide you with system status indications A ribbon cable has bundled these wires together to simplify the connection Connect the cable from JF2 on the serverboard to the appro priate header on the Control Panel PCB printed circuit board Make sure the red wire plugs into pin 1 on both connectors Pull all excess cabling out of the airflow path The control panel LEDs inform you of system status See Chapter 3 System Interface for details on the LEDs and the control panel buttons Details on JF2 can be found in Chapter 5 Advanced Serverboard Setup Chapter 6 Advanced Chassis S
2. SMBus Super lO Silicon Image 3112 2 Channel Interleaved DDR SDRAM Figure 1 1 Intel E7501 Chipset System Block Diagram Note This is a general block diagram Please see Chapter 5 for details 14 Chapter 1 Introduction 1 3 Server Chassis Features The SC813T is one of Supermicro s third generation 1U chassis and fea tures four hot swap SATA hard drive bays a slim CD ROM drive a slim 3 5 floppy drive and a revolutionary cooling design that can keep today s most powerful processors running well below their temperature thresholds The following is a general outline of the main features of the SC813T chas sis System Power When configured as a SuperServer 6013P T the SC813 chassis includes a 500W cold swap power supply Serial ATA Subsystem For the 6013P T the SC813T chassis was designed to support four Serial ATA hard drives which are hot swappable units Note The operating system you use must have RAID support to enable the hot swap capability of the Serial ATA drives Control Panel The SC813T control panel provides important system monitoring and control information LEDs indicate power on network activity hard disk drive ac tivity and system overheat conditions Also present are a main power button and a system reset button l O Backplane The SC813T is a 1U rackmount chassis Its I O backplane provides one full height
3. 6 5 Power Supply The SuperServer 6013P T has a single 500 watt power supply which is auto switching capable This enables it to automatically sense and operate with either a 100v or 240v input voltage An amber light will be illuminated on the power supply when the power is off An illuminated green light indicates that the power supply is operating Power Supply Failure If the power supply unit fails the system will shut down and you will need to replace the unit Replacement units can be ordered directly from Supermicro see contact information in the Preface As there is only one power supply unit in the 6013P T power must be completely removed from the server before removing and replacing the power supply unit for what ever reason Removing Replacing the Power Supply 1 Removing the power supply First turn the power switch on the control panel off then unplug the power cord from the system Remove the chassis cover by pressing the two release buttons on the top of the chassis near the front and push the chassis top rearward about one inch To remove the failed power unit push the beige colored release tab to the right and then carefully lift the unit up about 1 2 inch only If you lift too high you may damage the power distribution board that the other end of the unit is connected to Then pull the power unit straight back to unplug it from the power distribution board See Figure 6 6 2 Installing a new pow
4. System Memory This display informs you how much system memory is recognized as being present in the system Extended Memory This display informs you how much extended memory is recognized as being present in the system 7 5 SUPERSERVER 6013P T Manual 7 4 Advanced Setup Choose Advanced from the Phoenix BIOS Setup Utility main menu with the arrow keys You should see the following display The items with a triangle beside them have sub menus that can be accessed by highlighting the item and pressing lt Enter gt Options for PIR settings are displayed by highlighting the setting option using the arrow keys and pressing lt Enter gt All Advanced BIOS Setup options are described in this section Phoenix BIOS Setup Utility Main Advanced Security Power Boot Exit Item Specific Help Quick Boot Mode Enabled Quiet Boot Disabled P PCI PnP Configuration gt Cache Memory gt I O Device Configuration P Advanced Chipset Control b Advanced Processor Options gt DMI Event Logging gt Console Redirection Fl Help N select Item Change Values F9 Setup Defaults Esc Exit Select Menu Enter Select b Sub Menu F10 Save and Exit Quick Boot Mode If enabled this feature will speed up the POST Power On Self Test routine after the computer is turned on The settings are Enabled and Disabled If Disabled the POST routine will run at normal speed Quiet Boot This setting allows you to Enable or Disable the
5. Select folder where Setup wil inital thes Setup vail pntat SATAR mA n the folowang folder To inata to this folder chick Nest To install o a dilereni folder cick Drowse and select another folder Dasinstion Polder C Program Fies Sioon Imege SIGATAR od scot ES anor 3 J EStnstamstuesa wizard A zsm 3 When the screen shown above appears you are asked to choose the location where you want the SATA RAID program to write to Specify the destination location and click Next The following screen will appear VMrrelaliiS held Wizard Complete Setup has firashed initaling SATAR ad on your complet F7 proud We to launch SATAM ad Click Finish to cormplate SATAR ad Setup Ason E A amor _ Einstarsmesa wizard amp 72m 4 When the screen shown above appears the installation of the SATA RAID Software is completed You can launch the SATA RAID program by clicking the check box as shown above or to exit the program by clicking Finish as shown above Then the following screen will appear C 19 SUPERSERVER 6013P T Manual FETTE SS LLLLLLII LLIIINlNIII I IIIIII l 1TDz nz iJ 5 When the screen shown above appears it indicates that you have exited the SATA RAID Program and have retuned to the Windows OS environment If you want to access the SATA RAID Program from the Windows OS environment double click SATA RAID from the Pop up screen in the Start Menu as shown below f Windows 20 Appe
6. This riser card fits into the 133 MHz PCI X slot and was designed to support the use of one standard add on card and one low profile half height half length add on card Several jumpers on the motherboard are used to change the speeds of these slots if needed see Chapter 5 ATI Graphics Controller The X5DPR TG2 features an integrated ATI video controller based on the Rage XL graphics chip Rage XL fully supports sideband addressing and AGP texturing This onboard graphics package can provide a bandwidth of up to 512 MB sec over a 32 bit graphics memory bus 1 3 SUPERSERVER 6013P T Manual Onboard Controllers Ports The X5DPR TG2 includes one floppy drive controller and two onboard IDE controllers which support up to four hard drives or ATAPI devices Backpanel I O ports include one COM port two USB ports PS 2 mouse and keyboard ports and a video monitor port An Intel 82546EB Ethernet con troller is included to support two Gb LAN ports Other Features Other onboard features are included to promote system health These in clude various voltage monitors two CPU temperature sensors four fan Speed sensors a chassis intrusion header auto switching voltage regula tors chassis and CPU overheat sensors virus protection and BIOS rescue ATA100 Ports Graphics USB 1 1 Ports S Gb LAN Controlle gt 133 MHz PCI X Slot P64H2 gt 66 MHz PCI Slot Silicon Image 3112
7. ftp supermicro com utility Supero Doctor lll You can also download SDIII User s Guide at http www supermicro com PRODUCT Manuals SDIII UserGuide pdf For Linux we will still recommend Supero Doctor II C 22 Appendix C Software Installation Notes C 23 Appendix D System Specifications Appendix D System Specifications Processors Single or dual Intel Xeon 604 603 pin processors to 3 06 GHz with a 512K L2 cache at a front side system bus speed of 533 400 MHz Note Please refer to the support section of our web site for a complete listing of supported processors http www supermicro com TechSupport htm Chipset Intel E7501 chipset BIOS 4 Mb Phoenix Flash ROM Memory Capacity Six 184 pin DIMM sockets supporting up to 12 GB of low profile registered ECC DDR266 200 PC2100 1600 SDRAM Note Interleaved memory requires memory to be installed two at a time Memory speed is dependant on processor s front side bus speed See the memory section in Chapter 5 for details Operating Systems Supported Windows NT Windows 2000 Solaris Netware SCO UNIX and Linux Serial ATA Controller Two Silicon Image controllers Sil 3512 to support 4 port Serial ATA RAID 0 1 Serial ATA Backplane Controller Supermicro CSE SATA 813 Serial ATA Drive Bays Four 4 drive bays to house four 4 standard Serial ATA drives Peripheral Drive Bays One 1 slim 3 5 floppy drive One 1 slim CD R
8. BIOS battery and prevent the system from booting up IMPORTANT Always connect the power cord last and always remove it before adding removing or changing any hardware components Make sure that you install the processor into the CPU socket before you install the heatsink The XSDPR TG2 can support either one or two Xeon 604 or 603 pin processors of up to 3 06 GHz f installing one processor only install it into CPU socket 1 1 Lift the lever on the CPU socket Lift the lever completely or you will damage the CPU socket when Socket lever power is applied Install a proces sor into CPU 1 socket first 2 Install the CPU in the socket Make sure that pin 1 of the CPU is seated on pin 1 of the socket both corners are marked with a triangle When using only one CPU install it into CPU socket 1 CPU socket 2 is automatically disabled if only one CPU is used Pin 1 3 Press the lever down until you hear it click into the locked posi tion See Figure 5 1 for pictures of Socket lever in the 604 pin CPU socket before and locked position after the processor is installed Chapter 5 Advanced Serverboard Setup 4 Apply the proper amount of thermal compound to the CPU die and place the heatsink directly on the CPU so that the four mounting holes are aligned with those on the chassis Make sure the heatsink sits completely flat on the CPU if not completely flat the spac
9. Data Processor Core Data L3 Cache Data Package Data Part Number Data Thermal Reference Data Feature Data Other Data OEM Data P Hardware Monitor Logic Highlight this and hit Enter to see monitor data for the following items CPU1 Temperature CPU2 Temperature System Temperature CPU Fan1 CPU1 Chassis Fan CPU Fan2 CPU2 Chassis Fan Chassis Fan 1 7 21 SUPERSERVER 6013P T Manual Chassis Fan 2 Processor Vcore 3 3V Standby 3 3V Vcc 5V Vcc 12V Vcc 1 8V Vcc 12V Vcc 7 9 Exit Choose Exit from the Phoenix BIOS Setup Utility main menu with the arrow keys You should see the following display All Exit BIOS settings are described in this section Phoenix BIOS Setup Utility Main Advanced Security Power Boot PIR Exit Item Specific Help Exit Saving Changes Exit Discarding Changes Load Setup Defaults Discard Changes Save Changes F1 Help N select Item Change Values F9 Setup Defaults Esc Exit Select Menu Enter Select gt Sub Menu F10 Save and Exit 7 22 Chapter 7 BIOS Exit Saving Changes Highlight this item and hit Enter to save any changes you made and to exit the BIOS Setup utility Exit Discarding Changes Highlight this item and hit Enter to exit the BIOS Setup utility without saving any changes you may have made Load Setup Defaults Highlight this item and hit Enter to load the default settings for all items in the BIOS Setup These are the safest sett
10. Int 15h to enable remote keyboard CBh Redirect Int 13h to Memory Technologies Devices such as ROM RAM PCMCIA and serial disk CCh Redirect Int 10h to enable remote serial video B 4 Appendix B BIOS POST Codes POSTCode Description CDh CEh D2h Re map I O and memory for PCMCIA Initialize digitizer and display message Unknown interrupt The following are for boot block in Flash ROM POSTCode Description EOh Eth E2h E3h E4h E5h E6h E7h E8h E9h EAh EBh ECh EDh EEh EFh FOh Fih F2h F3h F4h F5h F6h F7h Initialize the chipset Initialize the bridge Initialize the CPU Initialize system timer Initialize system I O Check force recovery boot Checksum BIOS ROM Go to BIOS Set Huge Segment Initialize Multi Processor Initialize OEM special code Initialize PIC and DMA Initialize Memory type Initialize Memory size Shadow Boot Block System memory test Initialize interrupt vectors Initialize Run Time Clock Initialize video Initialize System Management Manager Output one beep Clear Huge Segment Boot to Mini DOS Boot to Full DOS Ifthe BIOS detects error 2C 2E or 30 base 512K RAM error it displays an additional word bitmap xxxx indicating the address line or bits that failed For example 2C 0002 means address line 1 bit one set has failed 2E 1020 means data bits 12 and 5 bits 12 and 5 set have failed in the lower 16 bits The BIOS also sends the bitmap to the port 80 LED displa
11. Level Format Rebuild help B PM Maxtor 6Y080M 78167MB 1 SM Maxtor 6Y160M0 156334MB th Select Menu ESC Previous Menu Enter Select Ctrl E Exit First HDD b In the above menu follow the instructions given to complete the process of rebuilding a Mirrored set Once the Mirrored Set is rebuilt press the Esc key to return the main menu IV Resolving Conflicts a If you find there are conflicts in the RAID sets you created earlier use the up and down arrow keys to select Resolve Conflicts in the main menu and press the Enter key The following screen will appear RAID Configuration Utility Silicon Image Inc Copyright C 2663 Create RAID set Delete RAID set Help for resolving Rebuild Mirrored set conflicts Resolve Conflicts Low Level Format B PM Maxtor 6Y080M0 78167MB 1 SM Maxtor BY158M8 156334MB th Select Menu ESC Previous Menu Enter Select Ctri E Exit First HDD Appendix C Software Installation Create RRID set Delete RRID set Rebuild Mirrored set Resolve Conflicts Low Level Format 8 1 b Once the above menu appears follow the instructions given to complete the process of Resolving Conflicts When completed press the lt Esc gt key to return the main menu V Low Level Formatting Note A Low Level Format will cause the Hard Drive to be completely refor matted a In the main menu use the up and down arrow keys to highlight Low Level Format and
12. Menu ESC Previous Menu Enter Select Ctri E Exit First HDD c When the above screen appears configure the 2nd HDD by highlighting your selection and pressing the Enter key The following screen will appear RAID Configuration Utility Silicon Image Inc Copyright C 2003 Select stripe size for striped RAID 8 set fluto configuration B PM Maxtor 6Y080M 78167MB 1 SM Maxtor 6Y160M0 156334MB th Select Menu ESC Previous Menu Enter Select Ctrl E Exit L First HDD C 6 Appendix C Software Installation d The above screen lets you determine the size for the Striped RAID 0 set Use the up and down arrow keys to make the selection and press the Enter key Once you have set the size for RAID O Striped RAID is cre ated You can now exit the Create Striped RAID RAID 0 Menu by pressing the Esc key to return to the main menu Creating a Mirrored RAID Set RAID 1 a In the main menu as shown on p C 3 use the up and down arrow keys to highlight Create RAID Set and press the Enter key The following screen will appear RAID Configuration Utility Silicon Image Inc Copyright C 2003 reate RAID set Delete RAID set Rebuild Mirrored set ETT Mir ror ed Mirrored RAID 1 Resolve Conflicts Low Level Format B PM Maxtor 6Y080MO 78167MB 1 SM Maxtor 6Y160M0 156334MB th Select Menu ESC Previous Menu Enter Select Ctri E Exit First HDD b In
13. Menu ESC Previous Menu Enter Select Ctrl E Exit First HDD b Use the up and down arrow keys to highlight the word Striped or Mirrored depending on how you wish to configure RAID then press the Enter key If Striped is selected the following screen will appear C 3 SUPERSERVER 6013P T Manual Creating a Striped RAID Set RAID 0 Automatically a When the screen on the previous page appears select Striped and hit the Enter key Then the following screen will appear RAID Configuration Utility Silicon Image Inc Copyright C 2063 Press Enter to automatica lly create a striped RAID 8 set Manual configuration Stripe size is 16K First drive is drive 8B Second drive is drive 1 B PM Maxtor 6V3878MB 78167MB 1 SM Maxtor 6Y168M8 156334MB tl Select Menu ESC Previous Menu Enter Select Ctri E Exit First HDD b Here you can choose to configure RAID either automatically or manu ally If you would like to create a mirror with an existing SATA drive on the same channel select manual otherwise select auto If you wish to configure it automatically use the up and down arrow keys to highlight Auto configuration and hit the lt Enter gt c You will then be prompted with the question Are you sure Y es N o to verify your selection Type Y to confirm the selection or type N to cancel the selection If Y is entered the following screen will appear to confirm that RAID O
14. follow the procedures given in this chapter when installing removing or reconfiguring Serial ATA or peripheral drives and when replacing the system power supply unit and cooling fans Chapter 7 BIOS The BIOS chapter includes an introduction to BIOS and provides detailed information on running the CMOS Setup Utility Appendix A BIOS POST Messages Appendix B BIOS POST Codes Appendix C Software Installation Appendix D System Specifications Preface Notes SUPERSERVER 6013P T Manual Table of Contents Preface About This Mariali Debet e eite ee ee iii M n al Organizat o M so raiione nter rtp cou gp nitet toe RT EM iii Chapter 1 Introduction to the SuperServer 6013P T 1 1 Overview es 1 1 1 2 Mainboard Features sssssssssssssesesseeeeenee eene nnne nte n nnn nnns 1 2 1 3 Server Chassis Features een eerie reete nn 1 5 1 4 Contacting SUpermlero uere teet pet ae 1 7 Chapter 2 Server Installation edb SOM EMV WOW RECEN EE 2 1 2 2 Unpacking the SuperServer 6013P T sese 2 1 2 8 Preparing for Setup ted edem cte i er p faite rua 2 1 Choosing a Setup Location ete 2 2 Rack Precautions Server PrecautiOrig noter eerte iste re e 2 2 2 4 Installing the SuperServer 6013P T into a Rack 2 3 Identifying the Sections of the Rack Rails essees 2 3 Installing the Chassis Rails sse e 2 4 Installing the Rack Rails mer rr
15. full length and one half height half length PCI slots one COM port the other is internal one VGA port two USB ports PS 2 mouse and keyboard ports and two Ethernet LAN ports See Figure 1 2 1 5 SUPERSERVER 6013P T Manual Keyboard Port Mouse Port Low Profile PCI Slot Standard PCI Slot Og a i z I E L E SO oO F 1 d f me mI LH Jl o Jess Meet T F eae DIL erm Seal j CJCIBDUJDID Oe 9 Oo Of a E cca A 3 eo E OD o USB Ports COM1 Port Ethernet Ports VGA Port Figure 1 2 I O Backplane Cooling System The SC813T chassis revolutionary cooling design has been optimized to provide sufficient cooling for dual Xeon configurations The SC813T in cludes two heavy duty 10 cm blower fans located in the middle of the chassis These fans operate continuously at full rom If they break down the ambient air temperature inside the chassis will rise and activate an overheat LED 1 6 Chapter 1 Introduction 1 4 Contacting Supermicro Headquarters Address SuperMicro Computer Inc 980 Rock Ave San Jose CA 95131 U S A Tel 1 408 503 8000 Fax 1 408 503 8008 Email marketing supermicro com General Information support supermicro com Technical Sup
16. properly and that the LED on the control panel has turned off Finish by replacing the chassis cover SUPERSERVER 6013P T Manual 10 cm Blower Fans Figure 6 2 System Cooling Fans with optional front bezel shown 6 4 Drive Bay Installation Removal Removing the Front Bezel If your system has a front bezel optional attached to the chassis you must first remove it to gain access to the drive bays To remove the bezel first unlock the front of the chassis then press the release knob see Figure 6 3 Carefully remove the bezel with both hands A filter located within the bezel can be removed for replacement cleaning It is recommended that you keep a maintenance log of filter cleaning replacement since its condition will affect the airflow throughout the whole system Chapter 6 Advanced Chassis Setup Figure 6 3 Removing the Front Bezel 1 Unlock 2 Press release knob 3 Remove bezel assembly Accessing the Drive Bays Serial ATA Drives Because of their hotswap capability you do not need to access the inside of the chassis or power down the system to install or replace Serial ATA drives Proceed to the next step for instructions CD ROM Floppy Disk Drives For installing removing a CD ROM or floppy disk drive you will need to gain access to the inside of the 6013P T by removi
17. server board Drivers amp Tools Win2000 SUPERMICR6 Drivers amp Tools Intel E7501 Chipset XSDPR TG2 Appendix C Software Installation C 3 Installing Other Software Programs and Drivers A Installing Drivers other than Silicon Image s 3112 SATA Host Controller Driver After you ve installed Windows Operating System a screen as shown be low will appear You are ready to install software programs and drivers that have not yet been installed To install these software programs and drivers click the icons to the right of these items amp SUPERMICRO X5DPR TG2 server board Drivers amp Tools Win2000 x al Intel E7501 chipset INF files SUPERMICR LZ Microsoft DirectX 9 0 Drivers amp Tools L ATI Graphics driver Intel E7501 Chipset Silicon Image S amp TARaid XSDPR TG2 SUPERMICRO Supero Doctor Ill mm de mm pone ixi Build L amp N SCSI driver diskettes and manuals 3 Browse CD Auto Start Up Next Time e bee e For more information please visit SUPERMICRO s web site Driver Tool Installation Display Screen SUPERMICRO Computer Inc Note Click the icons showing a hand writing on paper to view the readme files for each item Click the computer icons to the right of these items to install each item from the top to the bottom one at a time After installing each item you must re boot the system before moving on to the next item on
18. size found by POST differed from CMOS Diskette drive A error Diskette drive B error Drive A or B is present but fails the BIOS POST diskette tests Check to see that the drive is defined with the proper diskette type in Setup and that the diskette drive is attached correctly Incorrect Drive A type run SETUP Type of floppy drive A not correctly identified in Setup Incorrect Drive B type run SETUP Type of floppy drive B not correctly identified in Setup A2 Appendix A BIOS POST Messages System cache error Cache disabled RAM cache failed and BIOS disabled the cache On older boards check the cache jumpers You may have to replace the cache See your dealer A disabled cache slows system performance considerably CPUID CPU socket number for Multi Processor error EISA CMOS not writeable ServerBIOS2 test error Cannot write to EISA CMOS DMA Test Failed ServerBIOS2 test error Cannot write to extended DMA Direct Memory Access registers Software NMI Failed ServerBIOS2 test error Cannot generate software NMI Non Maskable Interrupt Fail Safe Timer NMI Failed ServerBlOS2 test error Fail Safe Timer takes too long device Address Conflict Address conflict for specified device Allocation Error for device Run ISA or EISA Configuration Utility to resolve resource conflict for the specified device CD ROM Drive CD ROM Drive identified Entering SETUP Starting Setup program Failing Bi
19. th SC813T P chassis has five LEDs These LEDs provide you with critical information related to different parts of the system This section explains what each LED indicates when illuminated and any corrective action you may need to take OLS e OVERHEAT Indicates an overheat condition in the chassis This may be caused by cables obstructing the airflow in the system or the ambient room temperature being too warm You should also check to make sure that the chassis cover is installed and that all fans are present and operat ing normally Finally check the air seals for damage The air seals are located under the blower fan and beneath the frame cross section that separates the drive bay area from the motherboard area of the chassis NIC2 e NIC2 Indicates network activity on GLAN2 when flashing NIC1 e NIC1 Indicates network activity on GLAN1 when flashing a e HDD Indicates IDE channel activity On the SuperServer 6013P T this light indicates SATA and CD ROM drive activity when flashing Chapter 3 System Interface e Power Indicates power is being supplied to the system s power supply units This LED should normally be illuminated when the system is operating 3 4 Serial ATA Drive Carrier LED Each Serial ATA drive carrier has a green LED When illuminated this green LED on the front of the Serial ATA drive carrier indicates drive activity A connection to the Serial ATA backplane enables this LED to blink on
20. the list You should install everything here except for the SUPER Doctor utility Intel LDCM and the LAN SCSI driver diskettes which are optional The bottom icon with a CD on it allows you to view the entire contents of the CD SUPERSERVER 6013P T Manual B Installing Silicon Image s Serial ATA RAID Software Program S SUPERMICRO XS5DPR TG2 server board Drivers amp Tools Win2000 x es A Intel E7501 chipset INF files SUPERMICR Microsoft DirectX 9 0 Drivers amp Tools A ATI Graphics driver Silicon Image S amp TARaid po IL SUPERMICRO Supero Doctor Ill Build LAN SCSI driver diskettes and manuals D G p Browse CD Auto Start Up Next Time SUPERMICRO Computer Inc For more information please visit SUPERMICRO s web site 1 After you ve installed Windows Operating System a screen as shown above will appear To install Silicon Image s SATA RAID software double click the icon to the right of Sil SATA RAID as shown above Then the screen as shown below will appear Welcome to the InstallShield Wizaed for SATAN aid Tho lenti resit Wand wil vitali SAT AR ad on your computer To continue click Next Asir A D D Ganor Ptnetatshickd wirard Ltr 2 When the screen shown above appears read the instructions and then click Next to continue The following screen will appear C 18 Appendix C Software Installation InstallShield Wizard Choose Destinabon Lecotion
21. the retention screws that secure the server unit to the rack Grasp the two handles on either side and pull the unit straight out until it locks you will hear a click Next depress the two buttons on the top of the chassis to release the top cover and at the same time push the cover away from you until it stops You can then lift the top cover from the chassis to gain full access to the inside of the server With the chassis cover removed unplug the power and data cables from the drive you want to remove Then locate the locking tab at the rear of the drive It will be on the left side of the drive when viewed from the front of the chassis Pull the tab away from the drive and push the drive unit out the front of the chassis Add a new drive by following this procedure in reverse order You may hear a faint click of the locking tab when the drive is fully inserted Remember to reconnect the data and power cables to the drive before replacing the chassis cover and restoring power to the System Please be aware of the following The floppy disk drive cable has seven twisted wires A color mark on a cable typically designates the location of pin 1 A single floppy disk drive ribbon cable has 34 wires and two connectors to provide for two floppy disk drives The connector with twisted wires always connects to drive A and the connector that does not have twisted wires always connects to drive B Chapter 6 Advanced Chassis Setup
22. you wish to delete a Mirrored RAID Set Set 1 use the up and down arrow keys to select Set 1 and press the Enter key to complete the selection The following screen will appear C 10 Appendix C Software Installation RAID Configuration Utility Silicon Image Inc Copyright C 2883 Create RAID set Delete RAID set Rebuild Mirrored set Resolve Conflicts Low Level Format Are You Sure Y N B PM Maxtor BVOBEMO 78167MB 1 SM Maxtor 6Y160M0 156334MB SetO Sil Striped Set lt PM gt 156331MB B Maxtor 6YO80MO Chunk size 4K 1i Select Menu 1 Maxtor 6Y160M0 Chunk size 4K ESC Previous Menu Enter Select Ctrl E Exit First HDD c When the above screen appears and you are prompted with Are you sure Y es N o to verify your selection type Y or N to verify or cancel the selection Once you ve typed Y and press the Enter key the RAID Set specified is deleted Exit the menu by pressing the Esc key to return to the main menu IIl Rebuilding a Mirrored RAID Set a If you wish to rebuild a damaged Mirrored set that was created earlier use the up and down arrow keys to select Rebuild Mirrored Set in the main menu as shown on p C 3 and press the lt Enter gt key The following screen will appear SUPERSERVER 6013P T Manual RAID Configuration Utility Silicon Image Inc Copyright C 2003 Create RAID set Delete RAID set Rebuild Mirrored set Resolve Conflicts Low
23. 0 4 8 EN 61000 4 11 Safety EN 60950 IEC 60950 Compliant UL Listed USA CUL Listed Canada TUV Certified Germany CE Marking Europe SUPERSERVER 6013P T Manual Notes
24. 2 Drive Select B 13 GND 14 Drive Select A 15 GND 16 Motor Enable 17 GND 18 DIR 19 GND 20 STEP 21 GND 22 Write Data 23 GND 24 Write Gate 25 GND 26 Track 00 27 GND 28 Write Protect 29 GND 30 Read Data 31 GND 32 Side 1 Select 33 GND 34 Diskette 5 21 SUPERSERVER 6013P T User s Manual IDE Connectors IDE Connector Pin Definitions J2 J3 Pin Number Function Pin Number Function There are no jumpers to 1 Reset IDE 2 GND configure the onboard IDE 1 3 Host Data 7 4 Host Data 8 5 Host Data 6 6 Host Data 9 and 2 connectors See the 7 Host Data 5 8 Host Data 10 1 9 Host Data 4 10 Host Data 11 table on the right for pin 11 Host Data3 12 Host Data 12 definitions 13 Host Data 2 14 Host Data 13 15 Host Data 1 16 Host Data 14 17 Host Data 0 18 Host Data 15 19 GND 20 Key 21 DRQ3 22 GND 23 VO Write 24 GND 25 l O Read 26 GND 27 IOCHRDY 28 BALE 29 DACK3 30 GND 31 IRQ14 32 IOCS16 33 Addr 1 34 GND 35 Addr 0 36 Addr 2 37 Chip Select 0 38 Chip Select 1 39 Activity 40 GND SATA Connectors SATA Connector Pin Definitions JS1 JS4 There are no jumpers to Pin Number Definition 1 GND configure the onboard 2 TXP SATAO JS1 SATA1 JS2 2 ND SATA2 JS3 SATA3 JS4 i ub connectors See the table 7 GND on the right for pin defini tions 5 22 Chapter 6 Advanced Chassis Setup Chapter 6 Advanced Chassis Setup This chapter covers the steps required to ins
25. AID Features in BIOS 6 To configure SATA ZCR you need to disable SATA RAID Features in BIOS C 2 Silicon Image SATA RAID Configuration Utility Note For easy access to the Serial ATA Configuration Utility it is recommended that you temporarily disable the Quick Boot and Quiet Boot settings in the Boot Features section of BIOA BIOS Advanced Settings To disable hit the Delete key at the POST to enter BIOS then use the right and left arrow keys to select Advanced Settings and hit the Enter key Once in Advanced Settings use the Up and Down arrow keys to select Boot Features then follow the instructions to disable both Quick Boot and Quiet Boot Please refer to Chapter 7 To Access the Serial ATA RAID Configuration Utility During the POST routine during system bootup hit CTRL S or F4 to access the Silicon Image configuration utility The following screen appears ry Channel Secondary Channel Appendix C Software Installation l Creating a RAID Set a In the main menu see screen shown below use the up and down arrow keys to highlight the item Create a RAID Set and press the Enter key to select this feature RAID Configuration Utility Silicon Image Inc Copyright C 2083 reate RAID set Delete RAID set r Striped RAID 8 Rebuild Mirrored set Striped Resolve Conflicts Low Level Format B PM Maxtor 6V88BMB 78167MB 1 SM Maxtor 6Y168M8 156334MB th Select
26. AN2 are located beside the VGA port on the I O backplane These ports accept RJ45 type cables Note Pin 10 is included on the 5 15 Serial Port Pin Definitions COM1 COM2 Pin Number Definition Pin Number Definition 1 cD 6 DSR 2 RD T RTS 3 TD 8 CTS 4 DTR 9 RI 5 Ground 10 NC Note Pin 10 is included on the header but not on the port PS 2 Keyboard and Mouse Port Pin Definitions J29 Pin Number Definition 1 Data NC Ground VCC Clock NC DnR N Fan Header Pin Definitions Pin Number Definition 1 Ground black 2 12V red 3 Tachometer Caution These fan headers are DC power header but not on the port SUPERSERVER 6013P T User s Manual Power LED Speaker NMI Speaker Connector Pin Definitions JD1 On the JDI header pins 1 3 are Pin for a power LED pins 4 7 are for Number Function Definition 4 Red wire Speaker data the speaker and pins 8 9 are for 5 Key No connection P 6 Key the NMI connection See the table 7 Speaker data on the right for speaker pin defini tions Note The speaker connec tor pins are for use with an exter nal speaker If you wish to use the onboard speaker you should close pins 6 7 with a jumper Third Power Supply Fail Header Connect a cable from your power npe e aaa supply to the JP8 header to pro Pin vide warning of power supply fail Number EA FES ure Thi
27. BIOS The BIOS is the Basic Input Output System used in all IBM PC XT AT and PS 2 compatible computers The PhoenixBIOS flash chip stores the System parameters such type of disk drives video displays etc in the CMOS The CMOS memory requires very little electrical power When the computer is turned off a back up battery provides power to the BIOS flash chip enabling it to retain system parameters Each time the computer is powered on the computer is configured with the values stored in the BIOS ROM by the system BIOS which gains control at boot up How To Change the Configuration Data The CMOS information that determines the system parameters may be changed by entering the BIOS Setup utility This Setup utility can be ac cessed by pressing the Delete key at the appropriate time during system boot see below Starting the Setup Utility Normally the only visible POST Power On Self Test routine is the memory test As the memory is being tested press the Delete key to enter the main menu of the BIOS Setup utility From the main menu you can access the other setup screens such as the Security and Power menus Begin ning with Section 7 3 detailed descriptions are given for each parameter setting in the Setup utility 7 1 SUPERSERVER 6013P T Manual 7 2 Running Setup Default settings are in bold text unless otherwise noted The BIOS setup options described in this section are selected by choos ing th
28. CPU1 Chassis Fan 1 BANK 3 m E DIMM 3B d JF2 n a Li i CPU2 Chassis Fan x lt CPU2 e W MCH a psi 2 Ds2 o hes ps4 J18 GLANI J3 J2 PCI X 1 se omes Ji P38 JP GLAN2 JP4 gt 1 82546EB P64H2 IcH3 BATTERY ERE Jue Ola la VGA BIOS SPEAKER 26 T S B z 8 Rage XL cHsrANS PCI Graphics per Controller Super 1 0 E eme SATA Ds3 S SATA LED iiile JD4 JP24 SATAI ps2 i Tq ctrttr YD2_ psi lj WOL WOR USB2 JPSi JPS2 JL1 1 1 r FPUSBO 1 Notes The IPMI socket is an optional feature Jumpers not noted are for test purposes only 5 10 I JP37 PWRLED Speaker JD1 Chapter 5 Advanced Serverboard Setup X5DPR TG2 Quick Reference Jumper Description Default Setting JBT1 CMOS Clear See Jumper Section JD1 Speaker Enable Pins 6 7 Closed Enabled JD4 GLAN Enable Disable Pins 1 2 Enabled JP4 VGA Enable Disable Pins 1 2 Enabled JP9 Power Fail Alarm En Disable Open Disabled JP37 Watchdog Enable Disable Closed Enabled JP38 Front Side Bus Speed Pins 1 2 Auto JPS1 JPS2 SATA1 2 Enable Disable Pins 1 2 Enabled Connecior Description ATX POWER Primary ATX 20 pin Power Connector COM1 COM2 COM1 COM2 Serial Port Connectors CPU1 CPU2 CPU 1 and CPU2 Sockets D1 D4 CPU LEDs DIMM 1A DIMM 3B Memory SDRAM Slots DS1 DS4 Serial ATA LEDs GLAN1 2 Gigabit Ethernet Ports J2 J3 IDE 1 2 Hard Disk Drive Connectors J15 Secondary 12V ATX Power Connector J17
29. Ds in the chassis See the Connector Definitions section in this chapter for details and pin descriptions of JF2 Figure 5 3 Front Control Panel Header Pins JF2 20 19 Ground NMI X X Power LED Vcc HDD LED Vcc NIC1 LED Vcc NIC2 LED Vcc Overheat LED Vcc Power Fail LED Vcc Ground Reset gt Reset Button Ground Pwr Power Button Chapter 5 Advanced Serverboard Setup 5 4 I O Ports The I O ports are color coded in conformance with the PC 99 specification See Figure 5 4 below for the colors and locations of the various I O ports Figure 5 4 Rear Panel I O Ports Keyboard Mouse USB0 1 Purple Green COM Port GLAN1 GLAN2 Turquoise VGA Port Blue 5 5 Installing Memory Note Check the Supermicro web site for recommended memory modules http www supermicro com TECHSUPPORT FAQs Memory_vendors htm CAUTION Exercise extreme care when installing or removing DIMM modules to prevent any possible damage Also note that the memory is interleaved to improve performance see step 1 DIMM Installation See Figure 5 5 1 Insert the desired number of DIMMs into the memory slots starting with Bank 1 both DIMM 1A and DIMM 1B The memory scheme is interleaved so you must install two modules at a time beginning with Bank 1 then Bank 2 and so on low profile memory The 6013P T requires the use of 2 Insert each DIMM module verti
30. Exit Item Specific Help Supervisor Password Is Clear User Password Is Clear Set Supervisor Password Enter Set User Password Enter Password on Boot Disabled Fixed Disk Boot Sector Normal F1 Help N select Item Change Values F9 Setup Defaults Esc Exit Select Menu Enter Select b Sub Menu F10 Save and Exit Supervisor Password Is This displays whether a supervisor password has been entered for the system Clear means such a password has not been used and Set means a supervisor password has been entered for the system User Password Is This displays whether a user password has been entered for the system Clear means such a password has not been used and Set means a user password has been entered for the system 7 15 SUPERSERVER 6013P T Manual Set Supervisor Password When the item Set Supervisor Password is highlighted hit the Enter key When prompted type the Supervisor s password in the dialogue box to set or to change supervisor s password which allows access to BIOS Set User Password When the item Set User Password is highlighted hit the Enter key When prompted type the user s password in the dialogue box to set or to change the user s password which allows access to the system at boot up Password on Boot This setting allows you to require a password to be entered when the system boots up Options are Enabled password required and Disabled password not require
31. J18 PCI X 1 PCI X 2 slots J22 IPMI Header J28 Keyboard Port J29 Mouse Port JD1 WD PWR LED SPKR JPS1 JPS2 JL1 JD2 FPUSB 0 1 JF2 Front Control Panel Connector JL1 Chassis Intrusion JP7 Floppy Disk Drive Connector JP8 Third Power Supply Fail Header JP24 SMB System Management Bus Header JP35 Keylock Header JP36 Alarm Reset Switch SATA0 1 2 3 Serial ATA Connectors USBO 1 2 Universal Serial Bus Ports VGA VGA Monitor Port WOL Wake on LAN Header WOR Wake on Ring Header 5 11 SUPERSERVER 6013P T User s Manual 5 8 Connector Definitions ATX Power Connection ATX Power Supply 20 pin Connector Pin Number Definition Pin Number Definition 11 3 3V 1 3 3V The power supply connector 12 12V 2 3 3V 13 COM 3 COM meets the SSI Superset ATX 20 a PS ON pes pin specification Make sure that 15 COM 5 COM 16 COM 6 45V the orientation of the connector is 17 COM 7 COM 18 5V 8 PW OK correct See the table on the right 19 ps S V B for pin definitions 20 5V 10 12V PWR_SEC Connection 8 Pin 12v Power Supply Connector J15 In addition to the Primary ATX ios Demi power connector above the Ping Definition 7 1 thru 4 Ground Secondary 12v 8 pin J15 connec Sthrus 12v tor must also be connected to your power supply See the table on the right for pin definitions NMI Button NMI Button Pin Definitions JF2 The non maskable interrupt butto
32. OM drive Four 4 3 5 x 1 drive bays for SATA drives D 1 SUPERSERVER 6013P T Manual Expansion Slots provided with butterfly riser card One 1 64 bit 183 MHz standard PCI X slot and one 1 64 bit 66 MHz low profile PCI slot Motherboard Model X5DPR TG2 Extended ATX form factor Dimensions 12 x 13 in 305 x 330 mm Chassis Model SC813T 500 Form Factor 1U rackmount Dimensions WxHxD 17 2 x 1 7 x 25 6 in 437 x 44 x 650 mm Weight Net Bare Bone 32 lbs 14 5 kg Gross Bare Bone 42 Ibs 19 1 kg System Cooling Two 2 10 cm blower fans System Input Requirements AC Input Voltage 100 240V AC auto range Rated Input Current 10A 115V to 5A 230V Rated Input Frequency 50 to 60 Hz Power Supply Rated Output Power 500W Model SP502 1S Part PWS 048 Rated Output Voltages 3 3V 20A 5V 20A 12V 36A 12V 1A 5Vsb 2A BTU Rating 2750 BTUs hr for rated output power of 500W Operating Environment Operating Temperature 0 to 35 degrees C Non operating Temperature 35 to 60 degrees C Operating Relative Humidity 5 to 90 non condensing Non operating Relative Humidity 5 to 95 non condensing Appendix D System Specifications Regulatory Compliance Electromagnetic Emissions FCC Class B EN 55022 Class B EN 61000 3 2 3 3 CISPR 22 Class B Electromagnetic Immunity EN 55024 CISPR 24 EN 61000 4 2 EN 61000 4 3 EN 61000 4 4 EN 61000 4 5 EN 61000 4 6 EN 6100
33. R 6013P T Manual POSTCode Description 18h 8254 timer initialization 1Ah 8237 DMA controller initialization 1Ch Reset Programmable Interrupt Controller 20h 1 8 1 1 Test DRAM refresh 22h 1 3 1 3 Test 8742 Keyboard Controller 24h Set ES segment register to 4 GB 28h Auto size DRAM 29h Initialize POST Memory Manager 2Ah Clear 512 kB base RAM 2Ch 1 3 4 1 RAM failure on address line xxxx 2Eh 1 3 4 3 RAM failure on data bits xxxx of low byte of memory bus 2Fh Enable cache before system BIOS shadow 32h Test CPU bus clock frequency 33h Initialize Phoenix Dispatch Manager 36h Warm start shut down 38h Shadow system BIOS ROM 3Ah Auto size cache 3Ch Advanced configuration of chipset registers 3Dh Load alternate registers with CMOS values 41h Initialize extended memory for RomPilot 42h Initialize interrupt vectors 45h POST device initialization 46h 2 1 2 3 Check ROM copyright notice 47h Initialize 120 support 48h Check video configuration against CMOS 49h Initialize PCI bus and devices 4Ah Initialize all video adapters in system 4Bh QuietBoot start optional 4Ch Shadow video BIOS ROM 4Eh Display BIOS copyright notice 4Fh Initialize MultiBoot 50h Display CPU type and speed 51h Initialize EISA board 52h Test keyboard 54h Set key click if enabled 55h Enable USB devices 58h 2 2 3 1 Test for unexpected interrupts 59h Initialize POST display service 5Ah Display prompt Press F2 to enter SETUP 5Bh Disabl
34. SUPERO SUPERSERVER 6013P T USER SMANUAL 1 0a The information in this User s Manual has been carefully reviewed and is believed to be accurate The vendor assumes no responsibility for any inaccuracies that may be contained in this document makes no commitment to update or to keep current the information in this manual or to notify any person or organization of the updates Please Note For the most up to date version of this manual please see our web site at www supermicro com SUPERMICRO COMPUTER reserves the right to make changes to the product described in this manual at any time and without notice This product including software if any and documentation may not in whole or in part be copied photocopied reproduced translated or reduced to any medium or machine without prior written consent IN NO EVENT WILL SUPERMICRO COMPUTER BE LIABLE FOR DIRECT INDIRECT SPECIAL INCIDENTAL SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGES IN PARTICULAR THE VENDOR SHALL NOT HAVE LIABILITY FOR ANY HARDWARE SOFTWARE OR DATA STORED OR USED WITH THE PRODUCT INCLUDING THE COSTS OF REPAIRING REPLACING INTEGRATING INSTALLING OR RECOVERING SUCH HARDWARE SOFTWARE OR DATA Any disputes arising between manu
35. a C cen cas Avenged WE fecu Et A D Eo cler TAL TT BOOt issu asta anne can aiino reme 7 19 7 8 7 9 Appendices Appendix A BIOS POST Messages isnat iieii E A 1 Appendix B BIOS Post Codes osa crt p ce ehe B 1 Appendix C Software Installation sese D 1 Appendix D System Specifications esee C 1 SUPERSERVER 6013P T User s Manual Notes Chapter 1 Introduction Chapter 1 Introduction 1 1 Overview The Supermicro SuperServer 6013P T is a high end dual processor 1U rackmount server that features some of the most advanced technology currently available The SuperServer 6013P T is comprised of two main subsystems the SC813T 1U rackmount chassis and the XSDPR TG2 dual Xeon processor serverboard Please refer to our web site for information on operating systems that have been certified for use with the SuperServer 6013P T www supermicro com In addition to the mainboard and chassis various hardware components may have been included with your SuperServer 6013P T as listed below Two 2 1U CPU heatsinks SNK 0040 e One 1 3 5 slim floppy drive e One 1 slim CD ROM drive o Two 2 riser cards CSE RR1U X and CSE RR1U LP e Two 2 system blower fans FAN 0059 e Serial ATA SATA Accessories One 1 SATA backplane CSE SATA 813 Four 4 SATA cables CBL 0058 One 1 SATA LED cable CBL 0056 Four 4 SATA drive carriers CSE PT39 e Rackmount hardwar
36. a striped RAID set has been created C4 Appendix C Software Installation RAID Configuration Utility Silicon Image Inc Copyright C 2683 reate RAID set Delete RAID set Rebuild Mirrored set Resolve Conflicts Low Level Format Press Enter to create RAID set Maxtor 6Y080MO 78167MB 1 SM Maxtor 6Y160M0 156334MB Set8 Sil Striped Set PM 156331MB B Maxtor 6Y080M0 Chunk size 16K th Select Menu 1 Maxtor 6Y160M0 Chunk size 16K ESC Previous Menu Enter Select Ctrl E Exit First HDD Manually a When the screen shown on the previous page appears select Manual configuration and hit the lt Enter gt key to access the screen below RAID Configuration Utility Silicon Image Inc Copyright C 2003 Select first drive for striped RAID 8 set Auto configuration 1st drive 6 PM B PM Maxtor B5VY8BB8MB 78167MB 1 SM Maxtor B5Y158M8 156334MB th Select Menu ESC Previous Menu Enter Select Ctrl E Exit First HDD b In this screen you can configure the first HDD to be the Primary Master or the Secondary Master After configuring the 1st HDD to be the Primary Master the following screen will appear C 5 SUPERSERVER 6013P T Manual RAID Configuration Utility Silicon Image Inc Copyright C 2083 Select second drive for striped RAID 8 set Auto configuration 2nd dr ive _ B PM Maxtor 6vY8088M8 78157MB 1 SM Maxtor 6Y160M0 156334MB tl Select
37. age you should file a damage claim with the carrier who delivered it Decide on a suitable location for the rack unit that will hold the SuperServer 6013P T It should be situated in a clean dust free area that is well venti lated Avoid areas where heat electrical noise and electromagnetic fields are generated You will also need it placed near a grounded power outlet Read the Rack and Server Precautions in the next section 2 3 Preparing for Setup The box the SuperServer 6013P T was shipped in should include two sets of rail assemblies two rail mounting brackets and the mounting screws you will need to install the system into the rack Follow the steps in the order given to complete the installation process in a minimum amount of time Please read this section in its entirety before you begin the installation procedure outlined in the sections that follow 2 1 SUPERSERVER 6013P T Manual Choosing a Setup Location Leave enough clearance in front of the rack to enable you to open the front door completely 725 inches Leave approximately 30 inches of clearance in the back of the rack to allow for sufficient airflow and ease in servicing AN Warnings and Precautions IN Rack Precautions Ensure that the leveling jacks on the bottom of the rack are fully extended to the floor with the full weight of the rack resting on them In single rack installation stabilizers should be attached to the rack In mult
38. and off when that particular drive is being accessed SUPERSERVER 6013P T User s Manual Notes Chapter 4 System Safety 4 1 Chapter 4 System Safety Electrical Safety Precautions A Basic electrical safety precautions should be followed to protect yourself from harm and the SuperServer 6013P T from damage Be aware of the locations of the power on off switch on the chassis as well as the room s emergency power off switch disconnection Switch or electrical outlet If an electrical accident occurs you can then quickly remove power from the system Do not work alone when working with high voltage components Power should always be disconnected from the system when removing or installing main system components such as the serverboard memory modules and the CD ROM and floppy drives not necessary for Serial ATA drives When disconnecting power you should first power down the system with the operating system and then unplug the power cords of all the power supply units in the system When working around exposed electrical circuits another person who is familiar with the power off controls should be nearby to switch off the power if necessary Use only one hand when working with powered on electrical equipment This is to avoid making a complete circuit which will cause electrical shock Use extreme caution when using metal tools which can easily damage any electrical components or circuit
39. ated by the fans 5 Supplying power to the system The last thing you must do is to provide input power to the system Plug the power cord from the power supply unit into a high quality power strip that offers protection from electrical noise and power surges It is recommended that you use an uninterruptible power supply UPS 2 9 SUPERSERVER 6013P T Manual Notes Chapter 3 System Interface Chapter 3 System Interface 3 1 Overview There are several LEDs on the control panel as well as others on the Serial ATA drive carriers to keep you constantly informed of the overall status of the system as well as the activity and health of specific components There are also two buttons on the chassis control panel and an on off switch on the power supply This chapter explains the meanings of all LED indicators and the appropriate response you may need to take 3 2 Control Panel Buttons There are two push button buttons located on the front of the chassis These are in order from left to right a reset button and a power on off button RESET CN M e RESET The reset switch reboots the system e POWER This is the main power switch which is used to apply or turn off the main system power Turning off system power with this button removes the main power but keeps standby power supplied to the system SUPERSERVER 6013P T User s Manual 3 3 Control Panel LEDs The control panel located on the front of
40. bag Do not let components or PCBs come into contact with your clothing which may retain a charge even if you are wearing a wrist strap Handle a board by its edges only do not touch its components peripheral chips memory modules or contacts When handling chips or modules avoid touching their pins Put the serverboard and peripherals back into their antistatic bags when not in use For grounding purposes make sure your computer chassis provides excellent conductivity between the power supply the case the mounting fasteners and the serverboard 4 3 SUPERSERVER 6013P T Manual 4 4 Operating Precautions A Care must be taken to assure that the chassis cover is in place when the 6013P T is operating to ensure proper cooling Out of warranty damage to the 6013P T system can occur if this practice is not strictly followed Figure 4 1 Installing the Onboard Battery LITHIUM BATTERY BATTERY HOLDER 4 4 Chapter 5 Advanced Serverboard Setup Chapter 5 Advanced Serverboard Setup This chapter covers the steps required to install processors and heatsinks to the X5DPR TG2 serverboard connect the data and power cables and install add on cards All serverboard jumpers and connections are de scribed and a layout and quick reference chart are included in this chapter Remember to close the chassis completely when you have finished working on the serverboard to protect and cool the syst
41. boards they come into contact with Do not use mats designed to decrease electrostatic discharge as protection from electrical shock Instead use rubber mats that have been specifically designed as electrical insulators 4 1 SUPERSERVER 6013P T Manual The power supply power cord must include a grounding plug and must be plugged into grounded electrical outlets Serverboard Battery CAUTION There is a danger of explosion if the onboard battery is installed upside down which will reverse its polarities On the X5BDPR TG2 the positive side should be facing up This battery must be replaced only with the same or an equivalent type recommended by the manufacturer Dispose of used batteries according to the manufacturer s instructions See Figure 4 1 CD ROM Laser CAUTION this server may have come equipped with a CD ROM drive To prevent direct exposure to the laser beam and hazardous radiation exposure do not open the enclosure or use the unit in any unconventional way 4 2 General Safety Precautions A Follow these rules to ensure general safety Keep the area around the SuperServer 6013P T clean and free of clutter The SuperServer 6013P T weighs approximately 39 Ibs 17 7 kg when fully loaded When lifting the system two people at either end should lift slowly with their feet spread out to distribute the weight Always keep your back straight and lift with your legs Place the cha
42. cally into its slot Pay attention to the notch along the bottom of the module to prevent inserting the DIMM module incorrectly 3 Gently press down on the DIMM module until it snaps into place in the slot Repeat for all modules see step 1 above SUPERSERVER 6013P T User s Manual Memory Support The X5DPR TG2 only supports ECC registered DDR266 200 MHz SDRAM memory ou are using 533 MHz front side bus processors s you must use DDR266 SDRAM If you are using 400 MHz front side bus processors s you may use either DDR266 or DDR200 SDRAM You should not mix DIMMs of different sizes and speeds See Figures 5 5a and 5 5b for installing and removing memory modules Figure 5 5a Side View of DIMM Installation into Slot ires Note Notch ios should align with the receptive point on the slot To Install Insert module vertically and press down until it snaps into place Pay attention to the bottom notch To Remove Use your thumbs to gently push each release tab outward to free the DIMM from the slot Figure 5 5b Top View of DIMM Slot Top View of DDR Slot Release Tab Ll Ll Release Tab Chapter 5 Advanced Serverboard Setup 5 6 Adding PCI Cards 1 PCI slots The X5DPR TG2 has one 64 bit 133 MHz PCI X slot for a full length standard PCI card and one slim 64 bit 66 MHz PCI slot The 64 bit 133 MHz PCI X slot should have a butterfly riser card installed
43. checking errors in binary data A parity error indicates that some data has been corrupted A4 Appendix A BIOS POST Messages Parity Check 2 nnnn Parity error found in the I O bus BIOS attempts to locate the address and display it on the screen If it cannot locate the address it displays Press F1 to resume F2 to Setup F3 for previous Displayed after any recoverable error message Press F1 to start the boot process or F2 to enter Setup and change the settings Press F3 to display the previous screen usually an initialization error of an Option ROM i e an add on card Write down and follow the information shown on the screen Press F2 to enter Setup Optional message displayed during POST Can be turned off in Setup PS 2 Mouse PS 2 mouse identified Run the 120 Configuration Utility One or more unclaimed block storage devices have the Configuration Request bit set in the LCT Run an I2O Configuration Utility e g the SAC utility System BIOS shadowed System BIOS copied to shadow RAM UMB upper limit segment address nnnn Displays the address nnnn of the upper limit of Upper Memory Blocks indicating released segments of the BIOS which can be reclaimed by a virtual memory manager Video BIOS shadowed Video BIOS successfully copied to shadow RAM AS SUPERSERVER 6013P T Manual Notes A 6 Appendix B BIOS POST Codes Appendix B BIOS POST Codes This se
44. ck Reference eerte eene 5 11 Connector Definitions sss 5 12 ATX Power COHFRBctlOR veio iere eere ere Eri EHE 5 12 PWR SEC Connection wins PL nd M Power LED TRES DD WED rotten tient eo ratae e INIG TED sess NIG 2 aE Disses T Overheat LED sse eene nnne e tnnt rennen Power Fail LED C aisi ure ee T Power Button Universal Serial BUS ote trt e rhe reete eee Extra USB Head6rs onore creo re A E E AAS Serial POMS i e ase nin rine xen ege e ER EY tete Ren eher rr ERU UR YU RR EX RS ATX PS 2 Keyboard amp Mouse Ports Fan Headers sessssssssssseseseeene eee nen ninth nnne nrnn iant senten nnne GLAN 1 2 Ethernet Ports eterne Power EED Speaker NML rt tee tren cte eR SUPERSERVER 6013P T Manual Third Power Supply Fail Header 5 atte 5 16 Chassis IhtrifSiOEl aceti reet tar tn ERE 5 16 Wake On LAN Wake On Ring zi KOVIOCK quem 5 9 Jumper Settings eseeesssssssseeseeeeeeeeetne nennen nenne nennen nnne Explanation of Jumpers neret rn tnr iai CMOS Clea E GLAN Enable DIsable c err err aree ers VGA Enable DIisable rrr re Rhe eres Es e RSS Front Side Bus Sped arenaen ente te tee ios Serial ATA Enable Disable ssssssssssseeeeeeeeee
45. ct Target drive of mmm 7555 Mirrored RAID 1 set M m AA 00A B PM Maxtor 6Y880M8 78167MB 1 SM Maxtor 5Y168M8 156334MB tl Select Menu ESC Previous Menu Enter Select Ctri E Exit First HDD e When the above screen appears you are asked to select the target drive Use the up and down arrow keys to make your selection and press the lt Enter gt key to complete the selection Once you ve selected a target drive a Mirrored RAID set is created as specified You can now exit the Create Mirrored RAID Set menu and return to the main menu by pressing the lt Esc gt key C 9 SUPERSERVER 6013P T Manual ll Deleting a RAID Set a If you wish to delete a RAID set that was created earlier use the up and down arrow keys to select Delete RAID Set in the main menu as shown on p C 3 and press the lt Enter gt key The following screen will appear RAID Configuration Utility Silicon Image Inc Copyright C 2083 Create RAID set Delete RAID set Rebuild Mirrored set Resolve Conflicts Set8 Low Level Format nial B PM Maxtor 6YO8OMO 78167MB 1 SM Maxtor 6Y160M0 156334MB SetO Sil Striped Set PM 156331MB B Maxtor 6Y080M0 Chunk size 4K th Select Menu 1 Maxtor 6Y160MO Chunk size 4K ESC Previous Menu Enter Select Ctri E Exit First HDD b If you wish to delete a Striped RAID Set RAID 0 use the up and down arrow keys to select Set 0 and press the Enter key If
46. ction lists the POST Power On Self Test codes for the PhoenixBIOS POST codes are divided into two categories recoverable and terminal Recoverable POST Errors When a recoverable type of error occurs during POST the BIOS will display an POST code that describes the problem BIOS may also issue one of the following beep codes 1 long and two short beeps video configuration error 1 continuous long beep no memory detected Terminal POST Errors If a terminal type of error occurs BIOS will shut down the system Before doing so BIOS will write the error to port 80h attempt to initialize video and write the error in the top left corner of the screen The following is a list of codes that may be written to port 80h POSTCode Description 02h Verify Real Mode 03h Disable Non Maskable Interrupt NMI 04h Get CPU type 06h Initialize system hardware 07h Disable shadow and execute code from the ROM 08h Initialize chipset with initial POST values 09h Set IN POST flag OAh Initialize CPU registers OBh Enable CPU cache OCh Initialize caches to initial POST values OEh Initialize I O component OFh Initialize the local bus IDE 10h Initialize Power Management 11h Load alternate registers with initial POST values 12h Restore CPU control word during warm boot 13h Initialize PCI Bus Mastering devices 14h Initialize keyboard controller 16h 1 2 2 3 BIOS ROM checksum 17h Initialize cache before memory Auto size B 1 SUPERSERVE
47. d Fixed Disk Boot Sector This setting may offer some protection against viruses when set to Write Protect which protects the boot sector on the hard drive from having a virus written to it The other option is Normal 7 16 Chapter 7 BIOS 7 6 Power Choose Power from the Phoenix BIOS Setup Utility main menu with the arrow keys You should see the following display Power setting options are displayed by highlighting the setting using the arrow keys and pressing lt Enter gt All Power BIOS settings are described in this section Phoenix BIOS Setup Utility Main Advanced Security Power Boot Exit Item Specific Help ACPI Mode Yes Power Savings Customized Suspend Timeout Off Resume On Time Off Resume on Modem Ring Off F1 Help Tl select Item Change Values F9 Setup Defaults Esc Exit 9 Select Menu Enter Select gt Sub Menu F10 Save and Exit ACPI Mode Use the setting to determine if you want to employ ACPI Advanced Configuration and Power Interface power management on your system Options are Yes and No Power Savings This setting sets the degree of power saving for the system The options are Disabled Customized Maximum Power Savings and Maximum Performance Customized allows you to alter the other two modes 7 17 SUPERSERVER 6013P T Manual Suspend Timeout Use this setting to specify the period of system inactivity to transpire before entering the suspend state Optio
48. details on how to change the order and specs of hard drives in the Item Specific Help window 7 19 SUPERSERVER 6013P T Manual 7 8 PIR Choose PIR from the Phoenix BIOS Setup Utility main menu with the arrow keys You should see the following display The items with a triangle beside them have sub menus that can be accessed by highlighting the item and pressing lt Enter gt PIR stands for Processor Info ROM which allows BIOS to read certain information from the processors Options for PIR settings are displayed by highlighting the setting option using the arrow keys and pressing lt Enter gt All PIR BIOS Setup options are described in this section Phoenix BIOS Setup Utility Main Advanced Security Power Boot PIR Exit Item Specific Help Select the Processor s PIR Select the Thermal Unit gt Processor Info ROM Data gt Hardware Monitor Logic Fl Help Tl select Item Change Values F9 Setup Defaults Esc Exit Select Menu Enter Select b Sub Menu F10 Save and Exit Select the Processor s PIR Selects the processor PIR Options are AOh A1h A2h A3h A4h A5h A6h A7h A8h A8h AAh ABh ACh ADh and AEh AFh Select the Thermal Unit Selects the thermal unit Options are 30h 31h 32h 33h 34h 35h 52h 53h 54h 55h 56h 57h 98h 99h 9Ah 9Bh and 9Ch 9Dh 7 20 Chapter 7 BIOS P Processor Info ROM Data Highlight this and hit Enter to see PIR data on the following items Header Info Processor
49. diagnostic screen during boot up 7 6 Chapter 7 BIOS P PCI PnP Configuration Access the submenu to make changes to the following settings Onboard LAN1 OPROM Configure Enabling this option provides the ability to boot from LAN1 The options are Enabled and Disabled Onboard LAN2 OPROM Configure Enabling this option provides the ability to boot from LAN2 The options are Enabled and Disabled Legacy USB Support This setting allows you to enable support for Legacy USB devices The settings are Enabled and Disabled Installed OS This setting allows you to choose which operating system you are using to run the system Options are Other Win95 Win98 WinMe and Win2000 NT4 Installation Workaround When enabled this setting provides a workaround for the absent floppy drive during NT4 installation Options are Enabled and Disabled Reset Configuration Data If set to Yes this setting clears the Extended System Configuration Data area Options are Yes and No SUPERSERVER 6013P T Manual P PCI Slot Configuration PCI PCIX Frequency Slot 1 3 Use this setting to change the speed of PCI PCIX slots 1 though 3 Options are Auto 33 MHz 66 MHz 100 MHz and 133 MHz PCI PCIX Frequency Slot 4 Use this setting to change the speed of PCI PCIX slot 4 Options are Auto 33 MHz 66 MHz 100 MHz and 133 MHz PCI PCIX Frequency Slot 5 Use this setting to change the speed of PCI PCIX slot 5 Options a
50. e with screws Two 2 rack rail assemblies Six 6 brackets for mounting the rack rails to a rack telco rack 1 1 SUPERSERVER 6013P T Manual e One 1 CD containing drivers and utilities e SuperServer 6013P T User s Manual 1 2 Mainboard Features At the heart of the SuperServer 6013P T lies the XSDPR TG2 a dual Intel Xeon processor serverboard designed to provide maximum performance Below are the main features of the XSDPR TG2 Chipset The X5DPR TG2 is based on Intel s E7501 chipset which is a high perfor mance core logic chipset designed for dual processor servers The E7501 chipset consists of four major components the Memory Control ler Hub MCH the I O Controller Hub 3 ICH3 the PCI X 64 bit Hub 2 0 P64H2 and the 82808AA Host Channel Adapter VxB The MCH has four hub interfaces one to communicate with the ICH3 and three for high speed I O communications The MCH employs a 144 bit wide memory bus for a DDR266 PC2100 memory interface which provides a total bandwidth of up to 4 2 GB s The ICH3 interface is a 266 MB sec point to point connection using an 8 bit wide 66 MHz base clock at a 4x data transfer rate The P64H2 interface is a 1 GB s point to point connec tion using a 16 bit wide 66 MHz base clock at a 8x data transfer rate The ICH3 I O Controller Hub provides various integrated functions including a two channel UDMA100 bus master IDE controller USB host controllers a System Manage
51. e 2 4 Installing the Server into the Rack eeee 2 5 Installing the Server into a Telco Rack eee 2 6 2 5 Checking the Serverboard Setup sse 2 7 2 6 Checking the Drive Bay Setup Chapter 3 System Interface E EEG RITE EE 3 1 3 2 Control Panel ButtONs irri o ere re eie ERES 3 1 vi Table of Contents 3 4 Serial ATA Drive Carner LED yersus erae ec recs 3 3 Chapter 4 System Safety 4 1 4 2 4 3 4 4 Electrical Safety PreCAUtONS iaioa ott t tete 4 1 General Safety Precautions ESD Precautions ssssssssssssssseeeeene netten ennt nnne entren Operating Precautions zu ccr ere reir en eer rre eremo Pre Chapter 5 Advanced Serverboard Setup 5 1 5 2 5 3 5 4 5 5 5 6 5 7 5 8 Handling the XSDPR TG2 Serverboard sse 5 1 PGA Processor and Heatsink Installation see 5 2 Connecting Gables oie e e eso E dca d redii trs 5 5 Connecting Data Cables oo tee eie ete teca 5 5 Connecting Power Cables sseeenenn 5 5 Connecting the Control Panel 2 nnns 5 6 VOIP c 5 7 Installing MemoOoFy iiic epe iaa crit na de FO NEERH ES COR ER CU EXE ES CERRO HERI 5 7 Adding POI Cards oti ete e veteri eda ets 5 9 Serverboard D tails rerne reri ERE ind nates ennai 5 10 X5DPRE TG2TLEAVOUL noi teet eto erit REEE dans 5 10 XSDPR TG2 Qui
52. e CPU cache B 2 Appendix B BIOS POST Codes POSTCode Description 5Ch 60h 62h 64h 66h 67h 68h 69h 6Ah 6Bh 6Ch 6Eh 70h 72h 76h 7Ch 7Dh 7Eh 80h 81h 82h 83h 84h 85h 86h 87h 88h 89h 8Ah 8Bh 8Ch 8Fh 90h 91h 92h 93h 95h 96h 97h 98h Test RAM between 512 and 640 kB Test extended memory Test extended memory address lines Jump to UserPatch1 Configure advanced cache registers Initialize Multi Processor APIC Enable external and CPU caches Setup System Management Mode SMM area Display external L2 cache size Load custom defaults optional Display shadow area message Display possible high address for UMB recovery Display error messages Check for configuration errors Check for keyboard errors Set up hardware interrupt vectors Initialize Intelligent System Monitoring Initialize coprocessor if present Disable onboard Super I O ports and IRQs Late POST device initialization Detect and install external RS232 ports Configure non MCD IDE controllers Detect and install external parallel ports Initialize PC compatible PnP ISA devices Re initialize onboard I O ports Configure Motherboard Configurable Devices optional Initialize BIOS Data Area Enable Non Maskable Interrupts NMIs Initialize Extended BIOS Data Area Test and initialize PS 2 mouse Initialize floppy controller Determine number of ATA drives optional Initialize hard disk controllers Initialize local bus hard disk contro
53. e appropriate text from the main BIOS Setup screen All displayed text is described in this section although the screen display is often all you need to understand how to set the options see on next page When you first power on the computer the PhoenixBIOS is immediately activated While the BIOS is in control the Setup program can be activated in one of two Ways 1 By pressing Delete immediately after turning the system on or 2 When the message shown below appears briefly at the bottom of the screen during the POST Power On Self Test press the Delete key to activate the main Setup menu Press the Delete key to enter Setup 7 3 Main BIOS Setup All main Setup options are described in this section The main BIOS Setup screen is displayed below Use the Up Down arrow keys to move among the different settings in each menu Use the Left Right arrow keys to change the options for each setting Press the Esc key to exit the CMOS Setup Menu The next section describes in detail how to navigate through the menus Items that use submenus are indicated with the B icon With the item highlighted press the Enter key to access the submenu 7 2 Chapter 7 BIOS Main BIOS Setup Menu Phoenix BIOS Setup Utility Main Advanced Security Power Boot Exit Item Specific Help System Time 16 19 20 System Date 02 02 02 Legacy Diskette A 1 44 1 25 MB Legacy Diskette B Not Installed Prima
54. e between the two will degrade the heat dissipation function of the heatsink which may cause the processor to overheat 5 Screw in two diagonal screws until just snug do not fully tighten then do the same with the remaining two diagonal screws Finish by fully tightening all four screws see Figure 5 2 6 If installing two processors repeat these steps to install the second processor in the CPU 2 slot Figure 5 1 604 pin PGA Socket Empty and with Processor Installed installing the CPU If the lever is only partly raised damage Warning Make sure you lift the lever completely when to the socket or CPU may result SUPERSERVER 6013P T User s Manual Heatsink Installation Figure 5 2 5 4 Chapter 5 Advanced Serverboard Setup 5 3 Connecting Cables Now that the processors are installed the next step is to connect the cables to the serverboard These include the data ribbon cables for the peripherals and control panel and the power cables Connecting Data Cables The ribbon cables used to transfer data from the peripheral devices have been carefully routed in preconfigured systems to prevent them from block ing the flow of cooling air that moves through the system from front to back If you need to disconnect any of these cables you should take care to keep them routed as they were originally after reconnecting them make sure the red wires connect to the pin 1 locations If you are configu
55. em sufficiently 5 1 Handling the X5DPR TG2 Serverboard Static electrical discharge can damage electronic components To prevent damage to printed circuit boards it is important to handle them very care fully see Chapter 4 Also note that the size and weight of the serverboard can cause it to bend if handled improperly which may result in damage To prevent the serverboard from bending keep one hand under the center of the board to support it when handling The following measures are gener ally sufficient to protect your equipment from static discharge Precautions Use a grounded wrist strap designed to prevent static discharge Touch a grounded metal object before removing any board from its anti Static bag Handle a board by its edges only do not touch its components periph eral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the serverboard add on cards and peripherals back into their anti static bags when not in use Unpacking The serverboard is shipped in antistatic packaging to avoid static damage When unpacking the board make sure the person handling it is static pro tected SUPERSERVER 6013P T User s Manual 5 2 PGA Processor and Heatsink Installation When handling the processor package avoid placing direct pressure on the label area of the fan Also do not place the serverboard on a conductive surface which can damage the
56. entifying the Sections of the Rack Rails You should have received a rack mounting kit with the SuperServer 6013P T The kit includes two sets of chassis rails four pieces total two of which are already installed on the chassis and two sets of rack rails four pieces total Figure 2 1 displays the two right side chassis rails and the two right side rack rails Note that two of the four chassis rails Chassis Rail 1 are already attached to the chassis Installing the Rack Rails Begin by joining one set of rack rails corresponding to either the left or the right side of the rack Do this by aligning the studs of one rail with the holes of the other rail Push the studs into the grooved holes and then push the rail to slide the studs to the end of the groove Repeat this with the rack rails used for the other side Next determine where you want to place the SuperServer 6013P T in the rack See Rack and Server Precautions in Section 2 3 Position the assembled rack rails at the desired location in the rack Screw the assembly securely to the rack using the brackets provided Attach the other assembly to the other side of the rack making sure both are at the exact same height and with the rail guides facing inward Locking Tabs Both of the two chassis rails on each side have a locking tab four total which serves two functions The first is to lock the server into place when installed and pushed fully into the rack which is its normal ope
57. er supply Replace the failed unit with another unit of the same input voltage output voltage and wattage It is highly recommended to replace it with exactly the same model power supply Carefully insert the new unit into position to plug it into the power distribution board making sure you are not holding it at too great an angle which may damage the power distribution board Push it completely into the power distribution board and seat it in the chassis When correctly installed it should be laying flat make sure the end of the power supply is not sitting on the stop in the chassis Reconnect the power cord replace the chassis top cover and reposition the unit back into the rack Finish by depressing the power button on the chassis front control panel 6 9 SUPERSERVER 6013P T Manual Removing Replacing the Power Supply with optional front bezel shown Figure 6 6 6 10 Chapter 7 BIOS Chapter 7 BIOS 7T 1 Introduction This chapter describes the PhoenixBIOS Setup utility for the XSDPR TG2 The Phoenix ROM BIOS is stored in a flash chip and can be easily upgraded using a floppy disk based program Note Due to periodic changes to the BIOS some settings may have been added or deleted and might not yet be recorded in this manual Please refer to the Manual Download area of the Supermicro web site lt http www supermicro com gt for any changes to BIOS that may not be reflected in this manual System
58. etup 6 3 System Fans Two 10 cm blower fans provide all the cooling needed for the SuperServer 6013P T It is very important that the chassis top cover is properly installed and making a good seal in order for the cooling air to circulate properly through the chassis and cool the components See Figure 6 2 System Fan Failure The fans run at 5000 rpm If a fan fails the ambient air temperature in the chassis will rise and activate the overheat LED on the control panel Re place any failed fan immediately with the same type and model You must power down the system before replacing a cooling fan removing the power cord is also recommended as a safety precaution Replacing System Cooling Fans 1 Removing a fan After turning off the power to the system first remove the chassis cover and unplug the fan cable from the motherboard Unscrew the failed blower fan from the chassis and pull it completely out from the serverboard 2 Installing a new fan Replace the failed fan with an identical 10 cm 12 volt fan available from Supermicro p n FAN 0059 Install the new fan in its proper place in the chassis by positioning it on the two mounting posts Secure the fan to the chassis with the screws you removed previously then attach the fan wires to the same chassis fan header you removed it from Make sure the air seal under the fan is properly installed and creating a good seal Power up the system and check that the fan is working
59. facturer and customer shall be governed by the laws of Santa Clara County in the State of California USA The State of California County of Santa Clara shall be the exclusive venue for the resolution of any such disputes Supermicro s total liability for all claims will not exceed the price paid for the hardware product Unless you request and receive written permission from SUPER MICRO COMPUTER you may not copy any part of this document Information in this document is subject to change without notice Other products and companies referred to herein are trademarks or registered trademarks of their respective companies or mark holders Copyright 2005 by SUPER MICRO COMPUTER INC All rights reserved Printed in the United States of America Preface Preface About This Manual This manual is written for professional system integrators and PC techni cians It provides information for the installation and use of the Super Server 6013P T Installation and maintainance should be performed by ex perienced technicians only The SuperServer 6013P T is a high end dual Xeon processor 1U rackmount server based on the SC813T 1U rackmount server chassis and the X5DPR TG2 serverboard which supports single or dual Xeon processors of up to 3 06 GHz at a Front Side system Bus speed of 533 400 MHz and up to 12 GB of DDR266 200 PC2100 1600 low profile SDRAM memory Manual Organization Chapter 1 Introduction The first chapter pr
60. fer to the table on 8 GND the right for pin definitions Power Fail LED Power Fail LED Pin The Power Fail LED connection is AO located on pins 5 and 6 of JF2 Pin Refer to the table on the right for x pin definitions This only applies 6 GND to redundant power supplies and So does not apply to the 6013P T Reset Button The Reset Button connection is lo ResetPin Definitions cated on pins 3 and 4 of JF2 At JF2 tach it to the hardware reset Pin x Number Definition switch on the computer case 3 Reset 4 Ground Refer to the table on the right for pin definitions 5 13 SUPERSERVER 6013P T User s Manual Power Button Connector Pin Definitions Power Button The Power Button connection is located on pins 1 and 2 of JF2 Momentarily contacting both pins will power on off the system This button can also be configured to function as a suspend button see the Power Button Mode setting in BIOS To turn off the power when set to suspend mode de press the button for at least 4 seconds Refer to the table on the right for pin definitions Universal Serial Bus J F2 Pin Number Definition 1 2 PW_ON Ground USBO0 1 Universal Serial Bus Pin Definitions USBO USB1 Two Universal Serial Bus ports em mm are located beside the PS 2 key Number Definition Number Definition 1 45V 1 45V board mouse ports USBO i
61. he middle front of the top cover to help you push the cover away from you until it stops You can then lift the top cover from the chassis to gain full access to the inside of the server 2 Check the CPUs processors You should have one or two processors already installed into the serverboard Each processor needs its own heatsink See Chapter 5 for instructions on processor and heatsink installation 3 Verify the proper CPU clock ratio setting If the CPU speed is not automatically detected you will need to set the correct speed with the BIOS Setup utility See the CPU Frequency Ratio settings in BIOS Chapter 7 for setting the proper CPU speed Most processor speeds are automatically detected so this step should be un necessary 4 Check the system memory Your 6013P T server system may have come with system memory al ready installed Make sure all DIMMs are fully seated in their slots For details on adding system memory refer to Chapter 5 5 Installing add on cards If desired you can install add on cards to the system See Chapter 5 for details on installing PCI add on cards 2 7 SUPERSERVER 6013P T Manual Figure 2 5 Accessing the Inside of the SuperServer 6013P T with optional front bezel shown 6 Check all cable connections and airflow Make sure all power and data cables are properly connected and not blocking the chassis airflow See Chapter 5 for details on cable connec tions Also check the air
62. hot pluggable meaning they can be removed and installed without powering down the system To remove a carrier push the release button located beside the drive LEDs Then Swing the colored handle fully out and use it to pull the unit straight out see Figure 6 5 Note Your operating system must have RAID support to enable the hot plug capability of the SATA drives Figure 6 5 Removing an SATA Drive from the Server Serial ATA Power Cables Serial ATA power cables should be routed so that they do not block the airflow through the chassis See the motherboard layout diagram for the location of the cable connections Serial ATA Backplane The Serial ATA drives plug into a backplane that provides power drive ID and bus termination A RAID controller can be used with the backplane to provide data security The operating system you use must have RAID support to enable the hot swap capability of the Serial ATA drives The backplane is already preconfigured so there are no jumpers or switches present on it 6 7 SUPERSERVER 6013P T Manual CD ROM and Floppy Drive Installation The top cover of the chassis must be opened to gain full access to the CD ROM and floppy drive bays The 6013P T accomodates only slim line CD ROM drives Side mounting brackets are needed to mount a slim line CD ROM drive in the 6013P T server You must power down the system before installing or removing a floppy or CD ROM drive First release
63. ight this item and press Enter to mark the DMI events as read 7 13 SUPERSERVER 6013P T Manual Clear All DMI Event Logs Select Yes and press Enter to clear all DMI event logs P Console Redirection Access the submenu to make changes to the following settings COM Port Address Specifies to redirect the console to On board COMA or On board COMB This setting can also be Disabled BAUD Rate Select the BAUD rate for console redirection Console Type Choose from the available options to select the console type for console redirection Flow Control Choose from the available options to select the flow control for console redirection Console Connection Select the console connection either Direct or Via Modem Continue CR after POST Choose whether to continue with console redirection after the POST routine Options are On and Off of Video Pages to Support Choose the number of video pages to allocate for redirection when video hardware is not available Options are 1 2 3 4 5 6 7 and 8 7 14 Chapter 7 BIOS 7 5 Security Choose Security from the Phoenix BIOS Setup Utility main menu with the arrow keys You should see the following display Security setting options are displayed by highlighting the setting using the arrow keys and pressing lt Enter gt All Security BIOS settings are described in this section Phoenix BIOS Setup Utility Main Advanced Security Power Boot
64. ings to use Discard Changes Highlight this item and hit Enter to discard cancel any changes you made You will remain in the Setup utility Save Changes Highlight this item and hit Enter to save any changes you made You will remain in the Setup utility 7 23 SUPERSERVER 6013P T Manual Notes 7 24 Appendix A BIOS POST Messages Appendix A BIOS POST Messages During the Power On Self Test POST the BIOS will check for problems If a problem is found the BIOS will activate an alarm or display a message The following is a list of such BIOS messages Failure Fixed Disk Fixed disk is not working or not configured properly Check to see if fixed disk is attached properly Run Setup Find out if the fixed disk type is correctly identified Stuck key Stuck key on keyboard Keyboard error Keyboard not working Keyboard Controller Failed Keyboard controller failed test May require replacing keyboard controller Keyboard locked Unlock key switch Unlock the system to proceed Monitor type does not match CMOS Run SETUP Monitor type not correctly identified in Setup Shadow Ram Failed at offset nnnn Shadow RAM failed at offset nnnn of the 64k block at which the error was detected System RAM Failed at offset nnnn System RAM failed at offset nnnn of in the 64k block at which the error was detected Extended RAM Failed at offset nnnn Extended memory not working or not configured prope
65. iple rack installations the racks should be coupled together Always make sure the rack is stable before extending a component from the rack You should extend only one component at a time extending two or more simultaneously may cause the rack to become unstable Server Precautions Review the electrical and general safety precautions in Chapter 4 Determine the placement of each component in the rack before you install the rails Install the heaviest server components on the bottom of the rack first and then work up Use a regulating uninterruptible power supply UPS to protect the server from power surges voltage spikes and to keep your system operating in case of a power failure Allow the hot plug Serial ATA drives and power supply units to cool before touching them Always keep the rack s front door and all panels and components on the servers closed when not servicing to maintain proper cooling 2 2 Chapter 2 Server Installation 2 4 Installing the SuperServer 6013P T into a Rack This section provides information on installing the SuperServer 6013P T into a rack unit with the rack rails provided If the 6013P T has already been mounted into a rack you can skip ahead to Sections 2 5 and 2 6 There are a variety of rack units on the market which may mean the assembly procedure will differ slightly You should also refer to the installation instructions that came with the rack unit you are using Id
66. lity Main Advanced Security Power Boot Exit Item Specific Help Select the drive type of the fixed Multi Sector Transfer 16 Sectors disk installed in LBA Mode Control Enabled your system If type 32 bit I O Enabled User is selected Transfer Mode Fast PIO 4 Cylinders Heads Ultra DMA Mode Disabled and Sectors can be edited directly Auto attempts to automatically detect the drive type for drives that comply with ANSI specifications F1 Help Ti Select Item Change Values F9 Setup Defaults Esc Exit lt Select Menu Enter Select b Sub Menu F10 Save and Exit 74 Chapter 7 BIOS Type Selects the type of IDE hard drive The options are Auto allows BIOS to automatically determine the hard drive s capacity number of heads etc a number from 1 39 to select a predetermined type of hard drive CD ROM and ATAPI Removable Multi Sector Transfers Select the number of transfer sectors Options are 2 4 6 8 and 16 Sectors LBA Mode Control This item determines whether Phoenix BIOS will access the IDE Primary Master Device via LBA mode The options are Enabled and Disabled 32 bit I O Selects 32 bit I O operation Options are Enabled and Disabled Transfer Mode Selects the transfer mode Options are Standard Fast PIO1 Fast PIO2 Fast PIO3 Fast PIO4 FPIO3 DMA1 and FPIO4 DMA2 Ultra DMA Mode Selects Ultra DMA Mode Options are Disabled Mode 0 Mode 1 Mode 2 Mode 3 Mode 4 and Mode 5
67. llers Jump to UserPatch2 Build MPTABLE for multi processor boards Install CD ROM for boot Clear huge ES segment register Fix up Multi Processor table 1 2 Search for option ROMs One long two short beeps on checksum failure B 3 SUPERSERVER 6013P T Manual POSTCode Description 99h Check for SMART Drive optional 9Ah Shadow option ROMs 9Ch Set up Power Management 9Dh Initialize security engine optional 9Eh Enable hardware interrupts 9Fh Determine number of ATA and SCSI drives AOh Set time of day A2h Check key lock A4h Initialize typematic rate A8h Erase F2 prompt AAh Scan for F2 key stroke ACh Enter SETUP AEh Clear Boot flag BOh Check for errors Bih Inform RomPilot about the end of POST B2h POST done prepare to boot operating system B4h 1 One short beep before boot B5h Terminate QuietBoot optional B6h Check password optional B7h Initialize ACPI BIOS B9h Prepare Boot BAh Initialize SMBIOS BBh Initialize PnP Option ROMs BCh Clear parity checkers BDh Display MultiBoot menu BEh Clear screen optional BFh Check virus and backup reminders COh Try to boot with INT 19 Cih Initialize POST Error Manager PEM C2h Initialize error logging C3h Initialize error display function C4h Initialize system error handler C5h PnPnd dual CMOS optional C6h Initialize note dock optional C7h Initialize note dock late C8h Force check optional C9h Extended checksum optional CAh Redirect
68. m will react when power returns after an unexpected loss of power Options are Stay Off Power On and Last State Watch Dog This setting is for enabling the Watch Dog feature The options are Enabled and Disabled KBC Clock Input Use this setting to set the clock frequency for the keyboard Options are 6 MHz 8 MHz and 12 MHz 7 9 SUPERSERVER 6013P T Manual Serial Port A This setting allows you to assign control of serial port A The options are Enabled user defined Disabled and Auto BIOS controlled Base I O Address Select the base I O address for serial port A The options are 3F8 2F8 3E8 and 2E8 Interrupt Select the IRQ interrupt request for serial port A Options are IRQ3 and IRQ4 Serial Port B This setting allows you to assign control of serial port B The options are Enabled user defined Disabled and Auto BIOS controlled Mode Specify the type of device that will be connected to serial port B Options are Normal and IR for an infrared device Base I O Address Select the base I O address for serial port B The options are 3F8 2F8 3E8 and 2E8 Interrupt Select the IRQ interrupt request for serial port B Options are IRQ3 and IRQ4 Parallel Port This setting allows you to assign control of the parallel port The options are Enabled user defined Disabled and Auto BIOS controlled Chapter 7 BIOS Base I O Address Select the base I O address for the
69. ment Bus controller and an AC 97 compliant interface The P64H2 PCI X Hub provides a 16 bit connection to the MCH for high performance IO capability and the 64 bit PCI X interface See Figure 1 1 for a system block diagram of the chipset 1 2 Chapter 1 Introduction Processors The X5DPR TG2 supports single or dual Intel 604 603 pin Xeon processors of up to 3 06 GHz at a 533 400 MHz FSB Please refer to the support section of our web site for a complete listing of supported processors http www supermicro com TechSupport htm Memory The X5DPR TG2 has six 184 pin DIMM slots that can support up to 12 GB of low profile registered ECC DDR266 200 PC2100 1600 SDRAM Module sizes of 128 MB 256 MB 512 MB 1 GB and 2 GB may be used to populate the DIMM slots This serverboard has has been designed to support 2GB DIMM modules for each memory slot but it has only been validated with 1GB memory modules Serial ATA Two Silicon Image SATALink Sil 3112 host controllers are integrated into the X5DPR TG2 to provide a four port Serial ATA subsystem which is RAID 0 and RAID 1 supported The Serial ATA drives are hot swappable units Note The operating system you use must have RAID support to enable the hot swap capability and RAID function of the Serial ATA drives PCI Expansion Slots The X5DPR TG2 has one 64 bit 133 MHz PCI X slot and one slim 64 bit 66 MHz PCI slot A butterfly riser card is included with the server
70. menu to make changes to the following settings CPU Speed This is a display that indicates the speed of the installed processor Frequency Ratio This setting allows you to specify the value of tthe internal frequency multiplier of the processor which is used to determine the processor speed Options are x8 x16 x17 x18 x19 x20 x21 x22 x23 and x24 Fast String Operations This setting allows you to Enable or Disable fast string operations Compatible FPU Code This setting allows you to Enable or Disable the compatible FPU code 7 12 Chapter 7 BIOS Split Lock Operations This setting allows you to Enable or Disable split lock operations Hyper threading This setting allows you to Enable or Disable hyper threading Enabling hyper threading results in increased CPU performance L3 Cache This setting allows you to Enable or Disable the L3 cache gt DMI Event Logging Access the submenu to make changes to the following settings Event Log Validity This is a display not a setting informing you of the event log validity Event Log Capacity This is a display not a setting informing you of the event log capacity View DMI Event Log Highlight this item and press Enter to view the contents of the event log Event Logging This setting allows you to Enable or Disable event logging ECC Event Logging This setting allows you to Enable or Disable ECC event logging Mark DMI Events as Read Highl
71. n Pin header is located on pins 19 and Number Definition 19 C l 20 of JF2 Refer to the table on 9 rie the right for pin definitions Power LED PWR LED Pin Definitions JF2 The Power LED connection is lo Pin Number Definition cated on pins 15 and 16 of JF2 15 Voc Refer to the table on the right for 16 Control pin definitions HDD LED The HDD IDE Hard Disk Drive LED joie connection is located on pins 13 JF2 and 14 of JF2 Attach the IDE hard LO Gstiti h drive LED cable to display disk ac 13 Voc 14 HD Active tivity Refer to the table on the right for pin definitions 5 12 Chapter 5 Advanced Serverboard Setup NIC1 LED The NIC1 Network Interface Con joe troller LED connection is located JF2 on pins 11 and 12 of JF2 Attach oM the NIC1 LED cable to display net n Ed work activity Refer to the table on the right for pin definitions NIC2 LED NIC2 LED Pin The NIC2 Network Interface Con Definitions troller LED connection is located ee on pins 9 and 10 of JF2 Attach er bride the NIC2 LED cable to display net i aun work activity Refer to the table on the right for pin definitions Overheat LED OH Overheat OH LED Pin Definitions Connect an LED to the OH connec JF2 tion on pins 7 and 8 of JF2 to pro Pin E Number Definition vide advanced warning of chassis 7 Vcc overheating Re
72. ndix C Software Installation C Supero Doctor Ill The Supero Doctor IIl program is a Web base management tool that supports remote management capability It includes Remote and Local Management tools The local management is called SD III Client The Supero Doctor Ill program included on the CDROM that came with your motherboard allows you to monitor the environment and operations of your system Supero Doctor Ill displays crucial system information such as CPU temperature system voltages and fan status See the Figure below for a display of the Supero Doctor IIl interface Supero Doctor Ill Interface Display Screen I Health Information Fie Edit View Favorites Tools Help a ent Report Help 1 Health Information Intrusion CPUl Chassis CPU2 Chassis C 21 SUPERSERVER 6013P T Manual Supero Doctor Ill Interface Display Screen Ill Remote Control 4 Supero Doctor III Microsoft Internet Explorer File Edit View Favorites Tools Help 1 Remote Control Graceful power control Supero Doctor III allows a user to inform the OS to reboot or shut down within a specified time the default is 30 seconds Before the system reboots or shuts down it s allowed to cancel the action Requirements Keep Supero SD3Service Daemon running at all times on this system Provide TCP IP connectivity Power control Note SD III Software Revision 1 0 can be downloaded from our Website at ftp
73. neenne Watch Dog Enable Disable da 5 10 Onboard Indicators essssssseseeeeerenneneeenee nennen GLEANT GEANO LDEDS rre rro e rrr 5 11 Floppy Hard Drive and Serial ATA Connections ssssssess 5 21 Floppy CONNECION aire e trien ae 5 21 IDE COMMCCIONS s uec toten HD ee UA er Erit testen RR 5 22 Serial ATA GContlectors soia mero maerore vim rH REP EE RES 5 22 Chapter 6 Advanced Chassis Setup 6 1 Static Sensitive Devices sssssssssssssessseeneeeeeeeee neret 6 1 6 2 Control Panel 6 3 System Fans System Fan Fail re r idt ete aed ede 6 3 Replacing System Cooling Fans eee 6 3 6 4 Drive Bay Installation Removal essen 6 4 ACCESSING the Driva BAYS wists e careo beni cente n eerte 6 4 Serial ATA Drive Installation sis acute 6 5 CD ROM and Floppy Drive Installation ne 6 7 6 5 Power Supply aire trr rt i eee inteaeci ti etri e A 6 8 Power Supply Failure 6 8 Removing Replacing the Power Supply se 6 8 Chapter 7 BIOS fs MOJU ecc ere rere ntrh I rti e rea abd rela cix ena Ea eel E rk AENEA 7 2 Running Setup he T 8 Main BIOS Setu p rrr nne ten tir tnter cile nap ianiai 7 2 Main BIOS Setup Menu cetero ete trece 7 3 7 4 Advanced Setup xit EmpUEHIDInIPEGEEIIU DEED 7 6 Table of Contents 455 SECUN ien ci eee peccet e ie ec e dre e e e 7 15 OS NO WON arose ied ei
74. ng the top cover of the chassis Proceed to the CD ROM and Floppy Drive Installation section later in this chapter for instructions Note Only a slim CD ROM drive will fit into the 6013P T SUPERSERVER 6013P T Manual Serial ATA Drive Installation 1 Mounting a Serial ATA drive in a drive carrier The Serial ATA drives are mounted in drive carriers to simplify their installation and removal from the chassis These carriers also help promote proper airflow for the Serial ATA drive bays For this reason even empty carriers without Serial ATA drives installed must remain in the chassis To add a new Serial ATA drive install a drive into the carrier with the printed circuit board side facing down so that the mounting holes align with those in the carrier Secure the drive to the carrier with six Screws as shown in Figure 6 4 Figure 6 4 Mounting an SATA Drive in a Carrier Use caution when working around the Serial ATA ZN backplane Do not touch the backplane with any metal objects and make sure no ribbon cables touch the backplane or obstruct the holes which aid in proper air flow drives are installed all drive carriers must remain in the Important Regardless of how many Serial ATA hard AN drive bays to maintain proper airflow Chapter 6 Advanced Chassis Setup 2 Installing removing hot swap SATA drives The SATA drive carriers are all easily accessible at the front of the chassis These hard drives are
75. ns are Off 5 min 10 min 15 min 20 min 30 min 40 min and 60 min Resume on Time Select either Off or On which will wake the system up at the time specified in the next setting Resume Time Use this setting to specify the time you want the system to wake up the above setting must be set to On Enter the time with the number keys Resume on Modem Ring Use this setting to enable or disable the WOR Wake on Ring feature Options are On and Off 7 18 Chapter 7 BIOS 7T 7 Boot Choose Boot from the Phoenix BIOS Setup Utility main menu with the arrow keys You should see the following display Highlighting a setting with a or will expand or collapse that entry See details on how to change the order and specs of boot devices in the Item Specific Help window All Boot BIOS settings are described in this section Phoenix BIOS Setup Utility Advanced Security Exit Item Specific Help Removable Devices CD ROM Drive Hard Drive Fl Help N select Item Change Values F9 Setup Defaults Esc Exit Select Menu Enter Select b Sub Menu F10 Save and Exit Removable Devices Highlight and press Enter to expand the field See details on how to change the order and specs of devices in the Item Specific Help window CD ROM Drive See details on how to change the order and specs of the CD ROM drive in the Item Specific Help window Hard Drive Highlight and press Enter to expand the field See
76. of Jumpers Connector 32 1 Pins To modify the operation of the e serverboard jumpers can be used to choose between ll uper optional settings Jumpers Cap create shorts between two pins 3 2 1 to change the function of the 2 Um vei Setting ERENI connector Pin 1 is identified Pin 1 2 short with a square solder pad on the printed circuit board See the serverboard layout page for jumper locations Note On two pin jumpers Closed means the jumper is on and Open means the jumper is off the pins CMOS Clear JBT1 is used to clear CMOS Instead of pins this jumper consists of con tact pads to prevent accidentally clearing the contents of CMOS To clear CMOS 1 First unplug the power cord s 2 With the power discon nected short the CMOS pads with a metal object such as a small screw driver 3 Remove the screwdriver or shorting device 4 Reconnect the power cord s and power on the system Note Do not use the PW_ON connector to clear CMOS Chapter 5 Advanced Serverboard Setup GLAN Enable Disable GLAN Enable Disable Jumper Settings JD4 Change the setting of jumper JD4 Jumper to enable or disable the onboard Position Definition Pins 1 2 Enabled GLAN ports GLAN1 and GLAN2 Pins 2 3 Disabled on the serverboard See the table on the right for jumper settings The default setting is enabled VGA Enable Disable VGA Enable Disable Jumpe
77. osition is open to disable the Watch Dog timer When en abled Watch Dog can reboot your PC if an application is hung up or the system goes down See the table on the right for jumper set tings 5 10 Onboard Indicators GLAN1 GLAN2 LEDs 1 Gb LAN Right LED Indicator The Ethernet ports located beside LED m the VGA port have two LEDs oF coc See the table on the right for the Green 100 MHz Orange 1GHz functions associated with these LEDs On each Gb LAN port the yellow LED indicates activity while the other LED may be green or ange or off to indicate the speed of the connection 5 20 Chapter 5 Advanced Serverboard Setup 5 11 Floppy Hard Disk Drive and SATA Connections Note the following when connecting the floppy and hard disk drive cables The floppy disk drive cable has seven twisted wires A red mark on a wire typically designates the location of pin 1 A single floppy disk drive ribbon cable has 34 wires and two connectors to provide for two floppy disk drives The connector with twisted wires always connects to drive A and the connector that does not have twisted wires always connects to drive B Floppy Connector The floppy connector is located on JP7 See the table below for pin definitions Floppy Connector Pin Definitions JP7 Pin Number Function Pin Number Function 1 GND 2 FDHDIN 3 GND 4 Reserved 5 Key 6 FDEDIN T GND 8 Index 9 GND 10 Motor Enable 11 GND 1
78. ovides a checklist of the main components included with the server system and describes the main features of the SUPER X5DPR TG2 serverboard and the SC813T chassis which make up the Super Server 6013P T Chapter 2 Server Installation This chapter describes the steps necessary to install the SuperServer 6013P T into a rack and check out the server configuration prior to power ing up the system If your server was ordered without processor and memory components this chapter will refer you to the appropriate sections of the manual for their installation Chapter 3 System Interface Refer here for details on the system interface which includes the functions and information provided by the control panel on the chassis as well as other LEDs located throughout the system SUPERSERVER 6013P T Manual Chapter 4 System Safety You should thoroughly familiarize yourself with this chapter for a general overview of safety precautions that should be followed when installing and servicing the SuperServer 6013P T Chapter 5 Advanced Serverboard Setup Chapter 5 provides detailed information on the XSDPR TG2 serverboard including the locations and functions of connectors headers and jumpers Refer to this chapter when adding or removing processors or main memory and when reconfiguring the serverboard Chapter 6 Advanced Chassis Setup Refer to Chapter 6 for detailed information on the 1U SC813T rackmount server chassis You should
79. parallel port 378 278 or 3BC Interrupt Select the IRQ interrupt request for the parallel port Options are IRQ5 and IRQ7 Mode Specify the parallel port mode Options are Output Only Bi directional EPP and ECP DMA Channel Specify the DMA channel Options are DMA1 and DMA3 Floppy Disk Controller This setting allows you to assign control of the floppy disk controller The options are Enabled user defined Disabled and Auto BIOS controlled Base I O Address Select the base I O address for the parallel port The options are Primary and Secondary gt Advanced Chipset Control Access the submenu to make changes to the following settings Clock Spectrum Feature The options for this setting are Disabled and Extended SMART Device Monitoring The options for this setting are Disabled and Extended 7 11 SUPERSERVER 6013P T Manual ECC Configuration This setting lets you enable or disable ECC Error Correction and Checking The options are ECC and Disabled ECC Error Type This setting lets you select which type of interrupt will be activated as a result of an ECC error The options are None NMI Non Maskable Interrupt SMI System Management Interrupt and SCI System Control Interrupt SERR Signal Condition This setting specifies the conditions required to qualify as an ECC error Options are None Single Bit Multiple Bit and Both gt Advanced Processor Options Access the sub
80. port Web Site www supermicro com Europe Address SuperMicro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro n General Information support supermicro nl Technical Support rma supermicro nl Customer Support Asia Pacific Address SuperMicro Taiwan 4F No 232 1 Liancheng Rd Chung Ho 235 Taipei County Taiwan R O C Tel 886 2 8226 3990 Fax 886 2 8226 3991 Web Site www supermicro com tw Technical Support Email support 2supermicro com tw Tel 886 2 8228 1366 ext 132 or 139 1 7 SUPERSERVER 6013P T Manual Notes Chapter 2 Server Installation Chapter 2 Server Installation 2 1 Overview This chapter provides a quick setup checklist to get your SuperServer 6013P T up and running Following these steps in the order given should enable you to have the system operational within a minimum amount of time This quick setup assumes that your SuperServer 6013P T system has come to you with the processors and memory preinstalled If your system is not already fully integrated with a serverboard processors system memory etc please turn to the chapter or section noted in each step for details on installing specific components 2 2 Unpacking the SuperServer 6013P T You should inspect the box the SuperServer 6013P T was shipped in and note if it was damaged in any way If the server itself shows dam
81. r Settings JP4 JP4 allows you to enable or disable Jumper the VGA port The default position Position Definition 1 2 Enabled is on pins 1 and 2 to enable VGA 2 8 Disabled See the table on the right for jumper settings Front Side Bus Speed Front Side Bus Speed Jumper Settings JP38 JP38 is used to set the system Jumper i Position Definition front side bus speed for the pro s e cessors t is best to keep this Pins 2 3 400 MHz Open 533 Mhz jumper set to Auto This jumper is used together with the CPU Ratio Frequency setting in BIOS See the table on the right for jumper settings Serial ATA Enable Disable Serial ATA Enable Disable Jumper Settings Jumpers JPS1 and JPS2 allow you JPS1 JPS2 i 1 Jumper to enable or disable the Serial ATA Position Definition headers Jumper JPS1 is for head Pins i 2 Enabled Pins 2 3 Disabled ers SATA 0 and SATA 1 and jumper JPS2 controls headers SATA 2 and SATA 3 The default setting is both jumpers on pins 1 2 to enable all four headers See the table on the right for jumper set tings 5 19 SUPERSERVER 6013P T User s Manual Watch Dog Enable Disable Watch Dog Timer Enable Disable Jumper Settings JP37 The Watch Dog jumper located on Jumper JP37 allows you to enable or dis Position Definition Open Disabled able the Watch Dog feature The Closed Enabled default p
82. rat ing position Secondly these tabs also lock the server in place when extended from the rack This prevents the server from coming completely out of the rack when you pull it out for servicing The two sets of locking tabs mean there are two locked positions when the chassis is extended from the rack allowing easy access when servicing the system Note that on one side you push the locking tab up to release it and on the other side you push it down to release 2 3 SUPERSERVER 6013P T Manual Installing the Chassis Rails Two of the chassis rails Chassis Rail 1 should have already been preattached one to each side of the chassis Attach the second set of chassis rails Chassis Rail 2 directly to the chassis with the screws provided Chassis Rail 2 should be positioned just behind Chassis Rail 1 see Figure 2 2 Do this for both sides of the chassis Figure 2 1 Identifying the Sections of the Rails Rack Rail 2 Rack Rail 1 Grooved Hole Chassis Rail 1 already attached to chassis Locking Tab Figure 2 2 Installing Chassis Rails Chassis Rail 1 2 4 Chapter 2 Server Installation Installing the Server into the Rack You should now have rails attached to both the chassis and the rack unit The next step is to install the server into the rack Do this by lining up the rear of the chassis rails with the front of the rack rails Slide the chassis rails into the rack rails keeping the pressu
83. re Auto 33 MHz 66 MHz 100 MHz and 133 MHz PCI PCIX Frequency Slot 6 Use this setting to change the speed of PCI PCIX slot 6 Options are Auto 33 MHz 66 MHz 100 MHz and 133 MHz P PCI Device Slot 1 Slot 6 Access the submenu for each of the six settings above to make changes to the following Option ROM Scan When enabled this setting will initialize the device expansion ROM Options are Enabled and Disabled Enable Master This setting allows you to enable the selected device as the PCI bus master Options are Enabled and Disabled Latency Timer This setting allows you to enable the Latency Timer Options are Default 0020h 0040h 0060h 0080h 00A0h 00COh and OOEOh 7 8 Chapter 7 BIOS Large Disk Access Mode This setting determines how large hard drives are to be accessed The options are DOS or Other for Unix Novellle NetWare and other operating systems Local Bus IDE Adapter Use this setting to enable the integrated local bus IDE adapter Options are Disable Primary Secondary and Both Cache Memory Access the submenu for this item to specify one of the following actions for various sections of cache memory Uncache Write Protect Write Back Write Through or Disable See the Item Specific Help window for details gt 1 O Device Configuration Access the submenu to make changes to the following settings Power Loss Control This setting allows you to choose how the syste
84. re even on both sides you may have to depress the locking tabs when inserting See Figure 2 3 When the server has been pushed completely into the rack you should hear the locking tabs click Finish by inserting and tightening the thumb screws that hold the front of the server to the rack Figure 2 3 Installing the Server into a Rack 2 5 SUPERSERVER 6013P T Manual Installing the Server into a Telco Rack If you are installing the SuperServer 6013P T into a Telco type rack follow the directions given on the previous pages for rack installation The only difference in the installation procedure will be the positioning of the rack brackets to the rack They should be spaced apart just enough to accommodate the width of the telco rack Figure 2 4 Installing the Server into a Telco Rack 2 6 Chapter 2 Server Installation 2 5 Checking the Serverboard Setup After you install the 6013P T in the rack you will need to open the unit to make sure the serverboard is properly installed and all the connections have been made 1 Accessing the inside of the 6013P T see Figure 2 5 First release the retention screws that secure the unit to the rack Grasp the two handles on either side and pull the unit straight out until it locks you will hear a click Next depress the two buttons on the top of the chassis to release the top cover There is a large rectangular recess in t
85. ring the sys tem keep the airflow in mind when routing the cables The following data cables with their serverboard connector locations noted should be con nected See the serverboard layout figure in this chapter for connector locations IDE Device Cables J2 and J3 Floppy Drive Cable JP7 Serial ATA Cables JS1 through JS4 Control Panel Cable JF2 see next page Connecting Power Cables The X5DPR TG2 has a 20 pin primary power supply connector designated ATX Power for connection to the ATX power supply Connect the appro priate connector from the power supply to the ATX Power connector to supply power to the serverboard See the Connector Definitions section in this chapter for power connector pin definitions In addition the 8 pin header connector included with your power supply must be connected to the PWR SEC connection J15 SUPERSERVER 6013P T User s Manual Connecting the Control Panel JF2 contains header pins for various front control panel connectors See Figure 5 3 for the pin locations of the various front control panel buttons and LED indicators Please note that even and odd numbered pins are on opposite sides of each header All JF2 wires have been bundled into single ribbon cable to simplify their connection Make sure the red wire plugs into pin 1 as marked on the serverboard The other end connects to the Control Panel printed circuit board located just behind the system status LE
86. rly at offset nnnn System battery is dead Replace and run SETUP The CMOS clock battery indicator shows the battery is dead Replace the battery and run Setup to reconfigure the system A 1 SUPERSERVER 6013P T Manual System CMOS checksum bad Default configuration used System CMOS has been corrupted or modified incorrectly perhaps by an application program that changes data stored in CMOS The BIOS installed Default Setup Values If you do not want these values enter Setup and enter your own values If the error persists check the system battery or contact your dealer System timer error The timer test failed Requires repair of system board Real time clock error Real Time Clock fails BIOS hardware test May require board repair Check date and time settings BIOS found date or time out of range and reset the Real Time Clock May require setting legal date 1991 2099 Previous boot incomplete Default configuration used Previous POST did not complete successfully POST loads default values and offers to run Setup If the failure was caused by incorrect values and they are not corrected the next boot will likely fail On systems with control of wait states improper Setup settings can also terminate POST and cause this error on the next boot Run Setup and verify that the waitstate configuration is correct This error is cleared the next time the system is booted Memory Size found by POST differed from CMOS Memory
87. ry Master 120 GB Primary Slave None Secondary Master CD ROM Secondary Slave None System Memory 256 MB Extended Memory 3967 KB F1 Help N Select Item Change Values F9 Setup Defaults Esc Exit Select Menu Enter Select gt Sub Menu F10 Save and Exit Main Setup Features System Time To set the system date and time key in the correct information in the appropriate fields Then press the Enter key to save the data System Date Using the arrow keys highlight the month day and year fields and enter the correct data Press the Enter key to save the data 7 3 SUPERSERVER 6013P T Manual Legacy Diskette A This setting allows the user to set the type of floppy disk drive installed as diskette A The options are Disabled 360Kb 5 25 in 1 2MB 5 25 in 720Kb 3 5 in 1 44 1 25MB 3 5 in and 2 88MB 3 5 in Legacy Diskette B This setting allows the user to set the type of floppy disk drive installed as diskette B The options are Disabled 360Kb 5 25 in 1 2MB 5 25 in 720Kb 3 5 in 1 44 1 25MB 3 5 in and 2 88MB 3 5 in P Primary Master Primary Slave Secondary Master Secondary Slave These settings allow the user to set the parameters of the IDE Primary Master Slave and IDE Secondary Master Slave slots Hit Enter to activate the following sub menu screen for detailed options of these items Set the correct configurations accordingly The items included in the sub menu are Phoenix BIOS Setup Uti
88. s the 2 Po 2 PO 3 PO 3 PO bottom connector and USB1 is the 2 Ground Ground top connector See the table on 5 N A 5 Key the right for pin definitions Extra Universal Serial Bus Headers FPUSBO 1 Front Panel Universal Serial Bus Pin Definitions FPUSBO FPUSB1 Two additional USB headers des Pin Pin ignated FPUSBO and FPUSB1 are Number __Definivon Number Definition included on the serverboard 2 Eos s Po 3 Po 3 PO These are included for connection 4 Ground 4 Ground to the ports on the front of the WA IS Key chassis A USB cable not in cluded is needed See the table on the right for pin definitions An additional header designated USB2 is also provided on the 5 14 X5DPR TG2 Chapter 5 Advanced Serverboard Setup Serial Ports The COM1 serial port is located beside the mouse port See the table on the right for pin defini tions The COM2 connector is a header on the serverboard see serverboard layout for location ATX PS 2 Keyboard and PS 2 Mouse Ports The ATX PS 2 keyboard and the PS 2 mouse ports are located at J28 and J29 respectively See the table on the right for pin defini tions Fan Headers The X5DPR TG2 has three fan headers These are designated CPU 1 Chassis Fan CPU 2 Chas sis Fan and Chassis Fan 3 See the table on the right for pin defini tions GLAN1 2 Ethernet Ports Two Ethernet ports designated GLAN1 and GL
89. s warning signal is Ee a EaI Sinal passed through the PWR_LED pin 4 Reset from MB on JF2 to indicate of a power fail ure on the chassis See the table on the right for pin definitions Note This feature is only avail able when using redundant Supermicro power supplies and so does not apply to the 6013P T Chassis Intrusion A Chassis Intrusion header is lo cated at JL1 Attach the appropri ate cable to inform you of a chas sis intrusion Chapter 5 Advanced Serverboard Setup Wake On LAN Wake On LAN Pin Definitions WOL The Wake On LAN header is des Pin i Number Definition ignated as WOL See the table on av Standby the right for pin definitions You 2 Ground Wake must enable the LAN Wake Up set x ting in BIOS to use this feature You must also have a LAN card with a Wake on LAN connector and cable Wake On Ring The Wake On Ring header is des Ec mi ignated WOR This function al WOR lows your computer to receive oM IR and wake up by an incoming call 1 Pads 2 M to the modem when in sustpend a state See the table on the right for pin definitions You must have a WOR card and cable to use this feature Keylock The keyboard lock connection is lo cated on JP35 Utilizing this header allows you to inhibit any actions made on the keyboard effectively locking it SUPERSERVER 6013P T User s Manual 5 9 Jumper Settings Explanation
90. seals for damage The air seals are located under the blower fan and beneath the frame cross section that sepa rates the drive bay area from the serverboard area of the chassis 2 8 Chapter 2 Server Installation 2 6 Checking the Drive Bay Setup Next you should check to make sure the peripheral drives and the Serial ATA drives and SCA backplane have been properly installed and all conn ections have been made 1 Accessing the drive bays All drives are accessable from the front of the server For servicing the CD ROM and floppy drives you will need to remove the top chassis cover The Serial ATA disk drives can be installed and removed from the front of the chassis without removing the top chassis cover 2 CD ROM and floppy disk drives A slim CD ROM and a floppy drive should be preinstalled in your server Refer to Chapter 6 if you need to reinstall a CD ROM and or floppy disk drive to the system 3 Check the SATA disk drives Depending upon your system s configuration your system may have one or more drives already installed If you need to install Serial ATA drives please refer to Chapter 6 4 Check the airflow Airflow is provided by two heavy duty 10 cm blower fans The system component layout was carefully designed to direct sufficient cooling air flow to the components that generate the most heat Note that all power and data cables have been routed in such a way that they do not block the airflow gener
91. ssis top cover and any system components that have been removed away from the system or on a table so that they won t accidentally be stepped on While working on the system do not wear loose clothing such as neckties and unbuttoned shirt sleeves which can come into contact with electrical circuits or be pulled into a cooling fan Remove any jewelry or metal objects from your body which are excellent metal conductors that can create short circuits and harm you if they come into contact with printed circuit boards or areas where power is present 4 2 Chapter 4 System Safety After accessing the inside of the system close the system back up and secure it to the rack unit with the retention screws after ensuring that all connections have been made 4 3 ESD Precautions A Electrostatic discharge ESD is generated by two objects with different electrical charges coming into contact with each other An electrical discharge is created to neutralize this difference which can damage electronic components and printed circuit boards The following measures are generally sufficient to neutralize this difference before contact is made to protect your equipment from ESD Use a grounded wrist strap designed to prevent static discharge Keep all components and printed circuit boards PCBs in their antistatic bags until ready for use Touch a grounded metal object before removing any board from its antistatic
92. stallation C 2 Installing the Operating System New Windows Operating System Installation a Insert Microsoft Windows OS Setup CD in the CD Driver and the System will start to boot up from CD b Press the F6 key when the message Press F6 if you need to install a third party SCSI or RAID driver displays c When the Windows OS Setup screen appears press S to specify additional device s d Insert the driver diskette Silicon Image Sil 3112 SATARAID Controller Driver into Drive A and press the Enter key e Choose Sil 3112 SATA RAID Controller from the list indicated in the Windows OS Setup Screen and press the Enter key f Press the lt Enter gt key to continue the installation process If you need to specify any additional devices to be installed do it at this time Once all devices are specified press the Enter key to continue with the installation g From the Windows OS Setup screen press the Enter key The OS Setup will automatically load all device files and then continue the Windows OS installation h After Windows OS Installation is completed the system will automati cally reboot i Insert Supermicro s CD that came with the package into the CD Drive during the system reboot and the following screen will appear j When the following screen appears you are ready to install other software programs and drivers SUPERSERVER 6013P T Manual S SUPERMICRO X5DPR TG2
93. tall components and perform maintenance on the SC813T chassis For component installation follow the Steps in the order given to eliminate the most common problems encoun tered If some steps are unnecessary skip ahead to the next step Tools Required The only tool you will need to install components and perform maintenance is a Philips screwdriver 6 1 Static Sensitive Devices Electricstatic discharge ESD can damage electronic components To pre vent damage to any printed circuit boards PCBs it is important to handle them very carefully The following measures are generally sufficient to protect your equipment from ESD damage Precautions Use a grounded wrist strap designed to prevent static discharge Touch a grounded metal object before removing any board from its anti static bag Handle a board by its edges only do not touch its components periph eral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the serverboard add on cards and peripherals back into their anti static bags when not in use For grounding purposes make sure your computer chassis provides ex cellent conductivity between the power supply the case the mounting fasteners and the serverboard SUPERSERVER 6013P T Manual Slim Line CD ROM Drive Floppy Drive System LEDs Control Panel
94. the above screen use the up and down arrow keys to highlight Create RAID set then Mirrored and press the Enter key The following Screen appears SUPERSERVER 6013P T Manual Ruto configuration Press Enter to manually create a mirrored RAID 1 set 6 PM Maxtor B5YOBOMG 78167MB 1 SM Maxtor BY158M8 156334MB tL Select Menu ESC Previous Menu Enter Select Ctrl E Exit First HDD c When the above screen appears use the up and down arrow keys to highlight Auto Configuration and press the Enter key if you wish to create Mirrored RAID Set automatically If you wish to configure the Mir rored RAID set manually select Manual Configuration and press the En ter key The following screen appears ont iguration U Select source drive of mirrored RAID 1 set Auto configuration B PM Maxtor 6Y080M0 78167MB 1 SM Maxtor 6Y160M0 156334MB th Select Menu ESC Previous Menu Enter Select Ctrl E Exit First HDD Appendix C Software Installation d When the above screen appears you can decide if you want the Primary Master or the Secondary Master to be the source drive Use the up and down arrow keys to make your selection and press the Enter key Once you have made your selection of the source drive and pressed the lt Enter gt key the following screen will appear RAID Configuration Utility Silicon Image Inc Copyright C 2883 fiuto configuration Sele
95. then press the Enter key The following screen will appear Select HDD to be formatted B PM nl PM Maxtor 6Y080M0 78167MB SM Maxtor 6Y160M0 156334MB th Select Menu ESC Previous Menu Enter Select Ctrl E Exit First HDD C 13 SUPERSERVER 6013P T Manual b When the above screen appears use the up and down arrow keys to specify the drive you wish to reformat and press the Enter key The following screen will appear RAID Configuration Utility Silicon Image Inc Copyright C 2083 Create RAID set Delete RAID set Rebuild Mirrored set Resolve Conflicts Low Level Format Select HDD to be formatted The Data will be lost fire You Sure Y N 6 PM Maxtor 6YO80MO 78167MB 1 SM Maxtor 6Y160M0 156334MB th Select Menu ESC Previous Menu Enter Select Ctri E Exit First HDD c When prompted Are you sure Y N type Y to confirm or N to cancel the selection Once you ve typed Y and pressed the Enter key the HDD specified will be reformatted Exit the Low Level Reformat menu by press ing the Esc key to return to the main menu V Exiting the RAID Configuration Utility a In the main menu as shown in the p C 3 press the Ctrl and the E keys at the same time to exit the Utility Program b When asked Are you sure you want to exit Y N type Y to exit the SATA RAID Configuration Utility Program The system will then reboot Appendix C Software In
96. ts nnnn The hex number nnnn is a map of the bits at the RAM address which failed the memory test Each 1 one in the map indicates a failed bit See errors 230 231 or 232 above for offset address of the failure in System Extended or Shadow memory A 3 SUPERSERVER 6013P T Manual Fixed Disk n Fixed disk n 0 3 identified Invalid System Configuration Data Problem with NVRAM CMOS data 1 0 device IRQ conflict l O device IRQ conflict error PS 2 Mouse Boot Summary Screen PS 2 Mouse installed nnnn kB Extended RAM Passed Where nnnn is the amount of RAM in kilobytes successfully tested nnnn Cache SRAM Passed Where nnnn is the amount of system cache in kilobytes successfully tested nnnn kB Shadow RAM Passed Where nnnn is the amount of shadow RAM in kilobytes successfully tested nnnn kB System RAM Passed Where nnnn is the amount of system RAM in kilobytes successfully tested One or more 120 Block Storage Devices were excluded from the Setup Boot Menu There was not enough room in the IPL table to display all installed 120 block storage devices Operating system not found Operating system cannot be located on either drive A or drive C Enter Setup and see if fixed disk and drive A are properly identified Parity Check 1 nnnn Parity error found in the system bus BIOS attempts to locate the address and display it on the screen If it cannot locate the address it displays Parity is a method for
97. which can accept one standard sized PCI card and one low profile PCI card see Figures 5 6a and 5 6b 2 PCI card installation Before installing a PCI add on card see step 1 above Begin by swing ing the release tab on the I O backpanel shield out to the left for the PCI slot Insert the PCI card into the correct slot on the butterfly riser card depending on whether it is a standard or low profile card pushing down with your thumbs evenly on both sides of the card Finish by pushing the release tab back to its original locked position Follow this procedure when adding a card to either slot Figure 5 6a Low Profile vs Standard PCI Card Form Factor Figure 5 6b Low Profile PCI Card Dimensions 5 9 SUPERSERVER 6013P T User s Manual 5 7 Serverboard Details Figure 5 7 SUPER X5DPR TG2 Layout not drawn to scale J28 Keyboard J15 12V PWR DIMM 1A a I ATX POWER BANK 1 J29 Mouse DIMM 1B Pe I USB0A JPa DIMM 2A CPU1 ic I BANK 2 Drs DIMM 2B H o N MEC s DIMM 3A 7
98. y It first displays the checkpoint code followed by a delay the high order byte another delay and then the loworder byte of the error It repeats this sequence continuously B 5 SUPERSERVER 6013P T Manual Notes Appendix C Software Installation Appendix C Software Installation After all the hardware has been installed you must first install the Silicon Image SATA RAID driver before you install the Windows operating system and other software drivers The necessary drivers are all included on the Supermicro CDs that came packaged with your system C 1 Installing SATA Driver for Silicon Image SATA Controller Serial ATA SATA Serial ATA SATA is a physical storage interface that uses a single cable with a minimum of four wires to create a point to point connection between de vices This interface is a serial link that supports transfer rates of up to 150 Mb s Because the serial cables used in SATA are thinner than the traditional cables used in Parallel ATA PATA SATA systems allow for better airflow and can thus be installed in smaller chassis than can PATA systems In addi tion PATA cables can only extend to 40cm while SATA cables can extend up to one meter Overall SATA provides better functionality than PATA Silicon Image s SATA Sil 31127 Host Controller Silicon Image s SATALink Sil 3112 host controller provides Serial ATA Soft ware RAID including striping and mirroring to enhance the industr
99. y s first PCI to SATA host controller products RAID striping can greatly improve hard disk I O performance because of its ability to stripe data across mul tiple drives RAID mirroring allows data to be simultaneously written to two drives so critical data is always available even if one hard disk fails With these two functions the Sil 3112 improves disk I O throughput and provides data accessibility regardless of single disk failures allowing systems to keep pace with increasing performance demands The X5DPR TG2 offers the user with the benefits of SATA RAID without the high costs associated with hardware RAID applications SUPERSERVER 6013P T Manual ATA Operating Modes You can select either the Legacy or Native mode of operation Notes 1 SATA RAID software function has been pre installed in the BIOS ROM and the Sil 3112 controller has been preset to Enabled via jumper JPA1 2 The SATA RAID Configuration Utility will not be accessible if there are no SATA hard drives installed in the system 3 In order to enable RAID functions or access the RAID features listed in the SATA RAID Configuration Utility at least two SATA hard drives must be installed in the system 4 The Supermicro CD ROM included with the system includes two SATA RAID drivers for use with Windows OS If SATA RAID Feature is enabled in BIOS use the RAID driver If disabled use the Non RAID driver 5 To configure RAID 0 1 you need to enable SATA R

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