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1.  important to drain the water from beneath the section by standing the slide vertically on end   Dry in an oven at approx  60   C for 30 to 60 minutes      E   Slides containing smears must contain no large clumps of other accumulations of material that cause     lumpiness    of the smear surface  Any clumps of material will be too thick for adequate microscopic visualization       ukhcedata0 1 dept Markey Markey Administration BCP SOP BCP SOP Histology SOP Current Histology  SOP Immunohistochemistry BCP H 8 IHC with Vectastain Kit docx    University of Kentucky Markey Cancer Center Biospecimen Core Program BCP H 8  113A  Combs Building  800 Rose Street   Lexington  KY 40536   ph   859  257 4717  ph   859  323 2618  fax   859  257 3757  10 10 12   Page 2 of 6  IHC with Vecstain Kit        F   Smears or cultured cell preparations should be fixed prior to staining  Fixed  air dried smears or cultures may  be stained starting with the first aqueous buffer step of the protocol     VI  MATERIALS  REAGENTS  EQUIPMENT and SAFETY PRECAUTIONS     A  Equipment  1 Tissue Tek containers or coplin jars     2  Forceps   3  Drying oven  capable of maintaining 60   C or less  4  Wash bottle   5  Kim Wipes or absorbent wipes   6  Coverslips   7  Slides  SuperFrost Plus   8  Timer  capable of 3     40 minute intervals    9  Humid chamber    B  MATERIALS  1  RETRIEVAL BUFFER  e g  10X Citrate diluted to appropriate concentration   2  TBST Buffer Solution  a  For liquid concentrate  Mix 250 mill
2. Kit       Signature Name in Print Date  Signature Name in Print Date  Signature Name in Print Date    Date this version is removed from the manual   Date the procedure is retired          ukhcedata0 1 dept Markey Markey Administration BCP SOP BCP SOP Histology SOP Current Histology  SOP Immunohistochemistry BCP H 8 IHC with Vectastain Kit docx    
3. OXYLIN    Immerse slides in a bath of hematoxylin  Incubate for 2 5 minutes  depending on the strength of hematoxylin  used     Rinse slides in a bath of distilled or deionized water for 2 5 minutes  Ensure all residual hematoxylin has been  cleared  Dip slides 10 times into a bath of 37mmol L ammonia water  Rinse slides in a bath of distilled or  deionized water for 2 5 minutes     Note  Depending on the incubation length and potency of the hematoxylin used counterstaining will result  in a pale to dark to dark blue coloration of the cell nuclei  Excessive or incomplete counterstaining may  compromise proper interpretation of results       Dehydration and clearing of slides    After staining  if slides are to be mounted with a non aqueous  permanent mounting media you must remove all  water before coverslipping  This step should be performed at room temperature  20 25   C      a  Place slides in 95  alcohol and incubate for 5    1  minute  Change bath and repeat once    b  Tap off excess liquid and place slides in 100  alcohol for 3    1  minute  Change bath and repeat once    c  Tap off excess liquid and place slides in xylene or xylene substitute for 3    1  minute  Change bath and  repeat   to 2 times     Mounting      ukhcedata0 1 dept Markey Markey Administration BCP SOP BCP SOP Histology SOP Current Histology  SOP Immunohistochemistry BCP H 8 IHC with Vectastain Kit docx    University of Kentucky Markey Cancer Center Biospecimen Core Program BCP H 8  113A  Combs Buildi
4. University of Kentucky Markey Cancer Center Biospecimen Core Program BCP H 8  113A  Combs Building  800 Rose Street   Lexington  KY 40536   ph   859  257 4717  ph   859  323 2618  fax   859  257 3757  10 10 12   Page 1 of 6  IHC with Vecstain Kit       SUBJECT  IHC WITH VECTASTAIN KIT    I  PRINCIPLE  Purpose   The ABC system is widely accepted as one of the most sensitive   economical and reliable immunoperoxidase systems available  The ABC system is based on the  extraordinarily high affinity of the glycoprotein avidin for the small molecular weight vitamin   biotin  Because this affinity is over one million times higher than that of antibody for most  antigens  the binding of avidin to biotin  unlike antibody antigen interactions  is essentially  irreversible  In addition to this high affinity  the Biotin Avidin System can be effectively  exploited because avidin has four binding sites for biotin and most proteins  including antibodies  and enzymes  can be conjugated with several molecules of biotin  These aspects provide the  potential for macromolecular complexes to be formed between avidin and biotinylated enzymes   An immunoperoxidase procedure based on these properties was devised for localizing a variety  of histologically significant antigens and other markers  This technique employs unlabeled  primary antibody  followed by biotinylated secondary antibody and then a pre formed Avidin  and Biotinylated horseradish peroxidase macromolecular Complex  This system requir
5. ach set of test conditions should be  included in each staining run  If the positive control tissue fails to demonstrate positive staining  results with the test  specimen should be considered invalid       ukhcedata0 1 dept Markey Markey Administration BCP SOP BCP SOP Histology SOP Current Histology  SOP Immunohistochemistry BCP H 8 IHC with Vectastain Kit docx    University of Kentucky Markey Cancer Center Biospecimen Core Program BCP H 8  113A  Combs Building  800 Rose Street   Lexington  KY 40536    ph   859  257 4717  ph   859  323 2618  fax   859  257 3757   10 10 12    Page 3 of 6  IHC with Vecstain Kit       Negative Control Tissue       Use a negative control reagent in place of the primary antibody with a section of each experimental specimen to  evaluate nonspecific staining and allow better interpretation of specific staining at the antigen site  Refer to the  product insert of each primary antibody for specific recommendations  The incubation period for the negative  control reagent should be the same as the primary antibody     SAFETY PRECAUTIONS    X  PROCEDURE    1  Cut sections to 3 4um thickness  Place the sections on positively charged slides  or silanized slides  DO NOT  use additives in the floatation bath  Heat slides in oven at 58 to 60   C for 30 to 60 minutes     2  Deparaffinization and Rehydration   Prior to staining  tissue slides must be deparaffinized to remove embedding medium and rehydrated  Avoid  incomplete removal of paraffin  Residual embed
6. ding medium will result in non specific staining  This step  should be performed at room temperature  20    25   C    a  Place slides in a xylene or xylene substitute bath and incubate for 5    1  minute  Change bath and  repeat   to 2 times   b  Tap off excess liquid and place slides in 100  alcohol for 3    1  minute  Change bath and repeat 1 to  2 times   c  Tap off excess liquid and place slides in 95  alcohol for 3    1  minute  Change bath and repeat 1 to 2  times   d  Tap off excess liquid and place slides in distilled or deionized water for a minimum of 30 seconds     Note  Xylene and alcohol solutions should be changed after 40 slides     3  If necessary perform antigen retrieval techniques and or enzyme digestion step  a  Place the enzyme digestion reagent on the tissue for designated time  Proteinase K generally 5 min    OR   a  Place slides in a plastic container with Target Retrieval Solution and heat in Decloaking chamber  See  BCP H 6 Steam Retrieval    b  Remove the plastic container from the chamber and let stand at room temperature for at least 20  minutes    c  Place slides in Tris Buffer with Tween for 5 minutes     4  Peroxidase Block   Tap off excess buffer  Using a lintless tissue  such as a Kim wipe   carefully wipe around the specimen to  remove any remaining liquid and to keep reagents within the prescribed area  Apply enough reagent to cover  specimens  Incubate 5    1  minutes  Rinse gently with distilled or deionized water or Wash Buffer from a wa
7. es more  time than the standard DAKO Envision     system  which utilizes a polymer conjugated to  secondary antibody and HRP  but it does allow researchers to use primary antibodies raised in  hosts other than mouse or rabbit  Since many research grade antibodies are raised in goat or rat  or various other species  the flexibility in choice of secondary antibody offsets the additional  time required for staining     ll  ROLE   A  Research Analyst    V  SPECIMENS  Samples       A   10  neutral buffered formalin is the most common fixative  Tissues should be fixed for 6 to 12 hours   However  it should be understood that all fixation procedures result in some reduction of antigen recognition   Formalin fixation should be kept to a minimum  and the laboratory should test each primary antibody used in a  fixation test protocol to verify that the fixation of the specimen is not creating negative specimens from positive  ones      B   The specimen will consist of formalin fixed paraffin embedded  FFPE  tissues  fixed smears  or cultured cells  adhered to glass slides      C   Specimens  FFPE tissues  should be cut into 3 4um thickness  unless designated by a specific primary  antibody  and mounted on positively charged slides      D   Paraffin sections should be mounted from a preheated floatation bath containing distilled or deionized water    bath temperature per institution guidelines   The water bath should contain no additives such as gelatin  stay on   polylysine  etc   It is
8. iliters buffer with 2 25 Liters of distilled or deionized  water  Stored at room temperature buffer is good for approximately 2 weeks  If buffer  becomes cloudy discard immediately   3  Proteinase K  Commercially purchased from DakoCytomation  S3004  or RTU  3020  with  expiration date on the container  Store at 2     8   C     4  Hydrogen Peroxide  0 03  hydrogen in methanol   5  Primary Antibody   6  Negative Control Serum  rabbit or mouse  as appropriate   store at 2     8   C  Expiration date is on  container     7  Biotinylated secondary antibody targeted to appropriate specie  Varies based on host in which  primary antibody was raised     8  ABC from Vectastain kit     Hematoxylin   10  Substrate Chromogen  DAB   3 3   diaminobenzidine  mix one drop  20uL  Liquid DAB   Chromogen to 1mL Buffered Substrate  Prepared Substrate Chromogen solution is stable for  approximately 5 days when stored at 2 8   C  This solution should be mixed thoroughly prior to  use  Any precipitate developing in the solution does not affect staining quality    11  Xylene or Xylene Substitutes   12  Reagent Alcohol   13  Mounting Media    Vil  QUALITY CONTROL    Positive Control Tissue       Controls should be fresh surgical specimens  autopsy tissue or cell pellets  fixed  processed and embedded as soon  as possible in the same manner as the experimental samples  Positive control tissues are indicative of correctly  prepared tissue and proper staining techniques  One positive control tissue for e
9. in TBST or dilution buffer  to cover specimen  approximately  200uL   At this time the ABC should be prepared  see next step   Incubate 30    1  minute  Rinse gently with  wash buffer from a wash bottle  do not focus flow directly on tissue  and place slides in a fresh wash buffer  bath     ABC  Avidin and biotin require at least 30 minutes at room temperature to complex  Be sure to prepare the mixture  by the time secondary antibody is applied to slides  Add exactly two  2  drops of REAGENT A to 5 ml of  buffer  mix well then add exactly two  2  drops of REAGENT B to the same bottle  mix immediately  and allow  to stand for about 30 minutes before use  Apply enough to cover tissue and incubate at room temperature for 30  minutes  Rinse gently with wash buffer from a wash bottle  do not focus flow directly on tissue  and place  slides in a fresh wash buffer bath     Substrate Chromogen Solution  DAB     Tap off excess buffer  Using a lintless tissue  such as a Kim wipe   carefully wipe around the specimen to  remove any remaining liquid and to keep reagents within the prescribed area  Using a pipette apply enough  Substrate  Chromogen solution to cover specimen  approximately 200uL   Incubate for 5   10 minutes or until  adequate signal develops  Rinse gently with distilled or deionized water only  do not focus flow directly on  tissue   Collect substrate chromogen solution waste in a hazardous materials container for proper disposal     Counterstain  Directions are for HEMAT
10. ng  800 Rose Street   Lexington  KY 40536   ph   859  257 4717  ph   859  323 2618  fax   859  257 3757  10 10 12   Page 5 of 6  IHC with Vecstain Kit       Non aqueous  permanent mounting media are recommended when using DAB  as the substrate chromogen   Otherwise  aqueous mounting media are also acceptable     NOTE  Slides may be read when convenient  However some fading may occur if slides are coverslipped  with an aqueous mounting medium and exposed to strong light over a period of one week  To minimize  fading  store slides in the dark at room temperature  20 25   C      XIII  REFERENCES   Vector Laboratories Vectastain Universal Elite ABC Kit User Manual  http   vectorlabs com data protocols PK   6200 pdf       XV  HISTORY BLOCK    Replaces       XVI  APPROVAL BLOCK     Written by  Dana Napier Date  10 10 2012  o y O O    Revised by  Date     Approved by  Date  _                 o           oOZ        OoOO o  Scientific Director    Approved by  Date   Medical Director    Annual Review Signed By     OOo e O e O   Signature   sae    Signature    sae YP  Signature      ukhedata0 1 dept Markey Markey Administration BCP SOP BCP SOP Histology SOP Current Histology  SOP Immunohistochemistry BCP H 8 IHC with Vectastain Kit docx       University of Kentucky Markey Cancer Center Biospecimen Core Program BCP H 8  113A  Combs Building  800 Rose Street   Lexington  KY 40536    ph   859  257 4717  ph   859  323 2618  fax   859  257 3757   10 10 12    Page 6 of 6    IHC with Vecstain 
11. sh  bottle and place in a fresh bath of wash buffer     5  Primary Antibody or Negative Control Reagent  Tap off excess buffer  Using a lintless tissue  such as a Kim wipe   carefully wipe around the specimen to  remove any remaining liquid and to keep reagents within the prescribed area  Apply enough Primary or  Negative Control reagent to cover specimen  approximately 200uL   Incubate for appropriate time at indicated      ukhcedata0 1 dept Markey Markey Administration BCP SOP BCP SOP Histology SOP Current Histology  SOP Immunohistochemistry BCP H 8 IHC with Vectastain Kit docx    University of Kentucky Markey Cancer Center Biospecimen Core Program BCP H 8  113A  Combs Building  800 Rose Street   Lexington  KY 40536    ph   859  257 4717  ph   859  323 2618  fax   859  257 3757   10 10 12    Page 4 of 6    IHC with Vecstain Kit       11     temperature  For most antibodies  this is 30 minutes to 1 hour at room temperature  though other primary  antibodies have enhanced staining when incubated overnight at 4  C  Refer to the SOP for the particular  antibody being used  Rinse gently with wash buffer from a wash bottle  do not focus flow directly on tissue   and place slides in a fresh wash buffer bath     Secondary antibody   Tap off excess buffer  Using a lintless tissue  such as a Kim wipe   carefully wipe around the specimen to  remove any remaining liquid and to keep reagents within the prescribed area  Apply enough biotinylated  secondary antibody  appropriately diluted 
    
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