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        OCS Quick Users Manual
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1.   3  Auto exposure     At first try   e Exposure time  1 min  e Binning  Large or Medium  e F Stop  1  Adjust time if needed       4  Acquire data     IVIS Acquisition Control Panel  Imaging Mode Exposure Time Binning F Stop Excitation Filter Emission Filter    d    Field of View   system Status   Status  Idle Acquire  N  an    Subject height  150  m    Sequence Setup      Sequence Setup   Setup  Focus   use subject height     eae Locked  OOOO iiaee      5  Label you data file and save it in the    Data temporary  folder     desktop         Add an X Ray    1  Place your anesthetized mice in the chamber  2  Follow    Bioluminescence Images    procedure  3  Add a check mark next to X Ray    F IYIS Acquisition Control Panel  Imaging Mode Exposure Time          Fstop       Emission Filter       Excitation Filter       Binning               Field of view  Ic         System Status        X Rays will be produced         de  iitsi   SCS when energized    Service   fio cm Acquire   Subject height   0 00    cr  amp  Sequence Setup     Focus  fuse subject height     Temperature  ll  Locked Initialize      4  Set up X Ray mode       Lock the door handle completely  Emergency switch in the ON  out  position  Key is turned ON    Push orange switch  light must be ON     The X ray source cannot be energized until these conditions have been  fulfilled     5  Acquire data    F IYIS Acquisition Control Panel  Imaging Mode Exposure Time Binning Fstop Excitation Filter Emission Filter    Field of
2.  view  System Status  Idle Acquire  ie  e me    Subject height  150 Siem   Sequence Setup       6  Label you data file and save it in the    Data temporary  folder     desktop     7  Return the key to the OFF position    Fluorescence Images    1  Place your anesthetized mice in the chamber  2  Turn on the Fluorescence light source  lower shelf        3  Put a check mark next to Fluorescent     I  IS Acquisition Control Panel  Imaging Mode Exposure Time Binning Fstop Excitation Filter Emission Filter    eff E zforen    puto H  puto H    Field of View      v  ot cm  Subject height  cm    System Status    Idle Acquire      Sequence Setup       3  Select excitation and emission filters  4  Acquire data    5  Label you data file and save it in the    Data temporary  folder     desktop     When you are done    1  Take ALL the mice out of the IVIS chamber    2  Gently wipe clean all surfaces  Use cleaning solution provided by DLAR  Do not spray or pour cleaning solution into the chamber    3 Clean the anesthesia box  Remove paper towels  Wipe with cleaning solution    What to do with the images     1  Close Living Image Software   x in the upper right corner of the screen    2 DO NOT LEAVE YOUR IMAGES ON THIS COMPUTER  Option 1  Export in your lab SAN space    e Click on the    Connect Research SAN    icon  desktop          e Follow the prompts    enter your SAN lab name  XXXlab     login with Kerberos ID and password    drag your data onto your SAN space    LOGOUT  Click the    Dis
3. OCS    Small Animal Imaging  Core Facility          Quick Users  Manual       This is a self service facility  It only works if everyone follows the  procedures    How to Start    1  Signup user logbook  Login  lViSuser    Pwd  user  2  Double click on Living Image Software icon     _     System Status    Aequirs       Ide  12 8 cm PO  subject height    1 50 cm    Sequence setur        This takes about 10 min    You can prepare your animals during this time    URL link to online manual  http   www caliperls com assets 022 8234 pdf    Prepare your animals    Only 3 mice at a time can fit together in the IVIS chamber    1  Inject animals with chromiluminescent substrate    2 Place a pad of paper towels inside the anesthesia box  before introducing your mice    3  Anesthetize your mice                 Eae  gt     emy Paper towels here    4  Place your animal s  in the IVIS chamber    Plug unused stations  Nose cone adaptor        D o  i y          e Nose in the plastic nose cone adaptor  e Make sure to plug the unused stations with rubber corks   nose cones and plugs are in the table drawer   5  Take ALL the mice out of the IVIS chamber back into a  cage asap    Bioluminescence Images    1  Place your anesthetized mice in the chamber  2  Put a check mark next to Luminescent    F IYIS Acquisition Control Panel  Imaging Mode Exposure Time Binning Fstop Excitation Filter Emission Filter    Field of View  system Status O Status  Idle Acquire  ae    Subject height    Sequence Setup  
4. connect Research SAN    icon       Option 2  Co our data on a USB flash drive  e USB port on the left side of the monitor       Option 3  Burn a CD  1  Delete your files from the computer    3  Logoff IViSuser          4  DO NOT Shutdown the computer    5  DO NOT turn off the main ON OFF switch in the  back of the instrument    Data Analysis Workstations    Analysis software is available at 4 workstations   e Ehrman Medical Library  Graphic area   e Smilow 308  e MSB 530  e HJD  location TBD     2 letters lab user IDs       elA Aifantis lab   e AE Erlebacher lab  e JH Hay lab   e EH Hernando Lab  e KS Kirsch lab   e DL Levy lab   e RN Novick lab   e QO O   Connor lab  e HB Samuels lab  oJI Torres lab   e HB Samuels lab   e YW Radiology    lf your lab does not have a user ID  contact Sheenah Mische  Skirball 3    Please do not create your own lab ID     PLEASE READ       elf you don   t know ask      gt  Luigi Scotto  O   Connor   s lab   ext  3 9123 Smilow 1306     gt  Maria Guijarro  Hernando   s lab   ext  3 9054 Smilow 3    e DO NOT TURN OFF the main  ON OFF switch in the back of the  instrument   e DO NOT shutdown the computer    e All data files left on the computer  will quickly be erased    e Leave the equipment clean    e Leave the room in order    
    
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