OMERO.webadmin User Guide - The Open Microscopy Environment
Contents
1. Chose the file from hardrive with using Broswer button and click Import see Figure 4 4 2 Copyright 2006 2008 University of Dundee All Rights reserved Page 12 OMERO webadmin User Guide Upload new File File name Upload new File 008 Ter fm 2 new F Q search A Network Date Modified eee 20 08 2007 Macintosh HD iSITA E Untitled Desktop A Applications PS Documents ity Movies 6 Music an Pictures New Folder Figure 4 4 2 Import file from the hard drive For keeping uploaded files each of them is stored on the hard drive under the OmeName directory on the path OMERO WebAamin Each user is recognized by the icon a The name includes date when file was uploaded If file has been uploaded click to select the file under the branch see Figure 4 4 3 Copyright 2006 2008 University of Dundee All Rights reserved Page 13 OMERO webadmin User Guide Upload new File List of Files aA root 3 jexamplei 2007 10 04 11 59 46 xls J example2 2007 10 05 09 10 19 csv jexample2 2007 10 05 09 11 58 csv Figure 4 4 3 Choosing the file Recognized users will appear in a table see Figure 4 4 4 Import scientist from file Users tmp UsersLists root example1 2007 10 04 11 59 46 xis Username Name Email Institution Actions useri Smith1 John A j smith email com Laboratory 1 user2 Smith2 John2 A j smith2 email com Laboratory 2 user3 Smith3 John3 A2. OMERO webadmin User Guide 1 Introduction This document provides a brief guide to the Beta 2 2 version of the OMERO webadmin software released for general use in October 2007 The OMERO webadmin tool provides a simple interface to administer an OMERO server The software has been developed as part of the Open Microscopy Environment OME consortium For more information on OMERO including information on bugs and updated versions visit http www openmicroscopy org The rest of the guide is arranged as follows e Section 2 Glossary e Section 3 Configuration Information about configuration e Section 4 Frequently Asked Question How to use the tool We hope you enjoy using the software The OMERO development team University of Dundee UK Copyright 2006 2008 University of Dundee All Rights reserved Page 1 OMERO webadmin User Guide 2 Glossary This section contains the meaning of some terms frequently used in this document Group Corresponds to a research group the scientist or experimenter is a member of Hostname The server host name Login The unique string used for accessing the system Password The personal private string used for accessing the system Port The server port User Corresponds to a scientist or an experimenter Username The unique string used for accessing the system Copyright 2006 2008 University of Dundee All Rights reserved Page 2 OMERO webadmin User Guide 3 Technica
3. 20 found displaying 15 scientists 1 15 Page 1 2 Figure 4 1 2 Main view Copyright 2006 2008 University of Dundee All Rights reserved Page 7 OMERO webadmin User Guide 4 2 How to manage users To manage users click on the Scientists button in the toolbar to display the list of existing users see Figure 4 1 2 You can then perform various Actions On the table Role column we can see icons which represent user attributes add a new user see Section 4 3 import many users from external source see Section 4 4 delete a user Section 4 5 edit user see Section 4 6 Scientists TTET hehe Rete ke wee me e Ge Gt at at ak oe ee oe ak ae ak ce ae ak ck Add New Scientist 3 Name 4 root root Tarkowska Aleksandra User1 Testi U User2 Test2 U User3 Test3 U User4 Test4 U User5 Test5 U User6 Test6 U User7 Test7 U User8 Test8 U UserS Test9 U Useri0 Testi0 U Userii Testii U Useri2 Testi2 U Useri3 Testi3 A 3 Username 4 root atarkowska useri user2 user3 user4 user5 user6 user7 user8 user9 user10 user11 user12 user13 KUKI 12 gt Institution Laboratory 10 Laboratory 1 Laboratory 2 Laboratory 3 Laboratory 4 Laboratory 5 Laboratory 6 Laboratory 7 Laboratory 8 Laboratory 9 Laboratory 10 Laboratory 11 Laboratory 12 Laboratory 13 18 found displaying 15 scientists 1 15 Page 1 2 Figure 4 2 1 List of Users E User is active and
4. see Figure 4 5 1 The page at http localhost 8080 says Are you sure you want to delete this record Cancel s Figure 4 5 1 Alert window Copyright 2006 2008 University of Dundee All Rights reserved Page 16 OMERO webadmin User Guide 4 6 How to edit an existing user s details From the Scientists page see Figure 4 1 2 click on the Edit button wj in the Actions column Then modify the following required information e Edit the user s first name field First Name e Edit the user s last name field Last Name Additional optional information can be updated Edit the user s middle name field Middle Name Edit the user s e mail address field Email Edit the institution the user is a member of field Institution Select Save to confirm Modifying the username of a given user is possible if only if the new username is not already used To be a valid email address you need to enter a string including the following characters for at and for dot Roles and groups information e Edit Active parameter to allow to log in to the system see Section 4 7 e Edit Administrator parameter to allow log in to the system as administrator see Section 4 9 e Edit Default Group e Edit Other Groups multi selection See Section 4 8 Copyright 2006 2008 University of Dundee All Rights reserved Page 17 OMERO webadmin User Guide Edit Scientist Username First name Mid
5. use your favorite web browser and enter the following link http localhost 1099 WebAdmin Copyright 2006 2008 University of Dundee All Rights reserved Page 4 OMERO webadmin User Guide 4 How to do The section contains a list of the most commonly asked questions about OMERO webadmin as well as solutions to a variety of common problems Check the list below for the answer to your question 4 1 How to log in 4 2 How to manage users 4 3 How to add a new user 4 4 How to add list new users in the one time 4 5 How to delete a user 4 6 How to edit an existing user s details 4 7 How to deactivate an account 4 8 How to modify the list of groups the user belongs to 4 9 How to set user as administrator 4 10 How to manage groups 4 11 How to add new group 4 12 How to delete a group 4 13 How to edit a group 4 14 How to manage users within a group 4 15 How to manage enumerations 4 16 How to add a new enumeration 4 17 How to edit an existing enumeration 4 18 How to manage drive space 4 19 How to manage my account 4 20 How to search and add new users from Ldap Copyright 2006 2008 University of Dundee All Rights reserved Page 5 OMERO webadmin User Guide 4 1 How to log in The Login page gives the access to the application In order to connect to an OMERO server the user has to specify the name of the server field Hostname the port used field Port a username field Login
6. Groups Actions Name 4 Owner Description amp Y default root ey group 1 user1 Description for group 1 More details yo amp Y group 2 user2 Description for group 2 More details yo amp y system root Figure 4 10 1 List of groups Copyright 2006 2008 University of Dundee All Rights reserved Page 24 OMERO webadmin User Guide 4 11 How to add new group To add a new group 1 Click on the Groups button in the toolbar to display the list of existing groups see Figure 4 9 1 2 Click on the Add new group button a Then enter the following information The name of the group field Group name The description of the group optional field Description The owner of the group field Owner Select Save to confirm Add new group Fields marked with an are mandatory Group name Description Owner root B d Save Figure 4 11 1 Add new group Copyright 2006 2008 University of Dundee All Rights reserved Page 25 OMERO webadmin User Guide 4 12 How to delete a group The current version of the system does not allow to deletion of a group Copyright 2006 2008 University of Dundee All Rights reserved Page 26 OMERO webadmin User Guide 4 13 How to edit a group From the Groups page see Section 4 10 click on the Edit button in the Actions column Then modify the following information The name of the group field Group name The description of the group op
7. a password field Password for more details about fields see Section 3 or Section 2 open microecopy environment Hostname localhost Port 1099 Login Password l Connect Figure 4 1 1 Login Form RE Usernames are case sensitive so alexandra would be a different user from Alexandra If user has forgotten your password but know his username and if he have a current email address in his OMERO registration details Forgotten Password will be able to send him an email containing NEW password and informations Copyright 2006 2008 University of Dundee All Rights reserved Page 6 OMERO webadmin User Guide After log in you can see main view Bt A PDS open microscopy environment Drive Space Search Import Scientists Groups Enumerations My Account Help Hello root Logout E Add New Scientist Scientists Name Username 4 Institution 4 root root root Smith10 John10 A useri0 Laboratory 10 Smithii John11 A userii Laboratory 11 Smith12 John12 A useri2 Laboratory 12 Smith13 Johni3 A user13 Laboratory 13 Smithi4 Johni4 A userl4 Laboratory 14 SmithiS John15 A useri5 Laboratory 15 Smith16 John16 A user16 Laboratory 16 Smith17 John17 A user17 Laboratory 17 User1 Testi U userl Laboratory 1 User2 Test2 U user2 Laboratory 2 User3 Test3 U user3 Laboratory 3 User4 Test4 U user4 Laboratory 4 aw Ey Ey EN ay a ae Ey ay aw ay EB ay 88 8 Eeee eee KAKI 12 gt
8. can be done by SHIFT or CTRL key from the Other groups list you want the user to be a member of Administrator iq O Active Default group groupl gt default group i Other groups group group3 group4 T Figure 4 8 1 Change user groups To remove the user from the groups is a member of select from the Edit User page the Blank item from the Other groups Administrator iwi Active wi Default group group H system 0 Other groups default groupe i igroupl T Figure 4 8 2 Delete user from group Copyright 2006 2008 University of Dundee All Rights reserved Page 21 OMERO webadmin User Guide Copyright 2006 2008 University of Dundee All Rights reserved Page 22 OMERO webadmin User Guide 4 9 How to set user as administrator To change an account to administration role you need to check the Administration box see Figure 4 6 1 This will enable the user to connect to the OMERO server as administrator and have access to whole functionality Copyright 2006 2008 University of Dundee All Rights reserved Page 23 OMERO webadmin User Guide 4 10 How to manage groups Click on the Groups button in the toolbar to display the list of existing groups see Figure 4 10 1 You can then perform various Actions add new group see Section 4 11 delete group Section 4 12 edit groups see Section 4 13 edit users in the groups see Section 4 14 E Add new group
9. j smith3 email com Laboratory 3 user4 Smith4 John4 A j smith4 email com Laboratory 4 user5 SmithS Johns A j smithS email com Laboratory 5 user6 Smith6 John6 A j smith6 email com Laboratory 6 user7 Smith7 John7 A j smith7 email com Laboratory 7 user8 Smith8 John8 A j smith8 email com Laboratory 8 user9 Smith9 John9 A j smith9 email com Laboratory 9 user10 Smith10 Johni0 A _ j smithi0 email com _ Laboratory 10 useril Smith11 Johni1 A j smith11 email com Laboratory 11 user12 Smith12 John12 A j smith12 email com Laboratory 12 staa sints Figure 4 4 4 Recognized users from external source Copyright 2006 2008 University of Dundee All Rights reserved Page 14 OMERO webadmin User Guide The Actions column includes checkboxes that allow us to specify which of users should be imported If user has empty field it means that the user with this username or email address exists in the database Click in the Actions column to select users to import Select the import button If the Import is successful the displey will return to the Import page see Figure 4 1 2 Copyright 2006 2008 University of Dundee All Rights reserved Page 15 OMERO webadmin User Guide 4 5 How to delete a user In the Scientists page see Figure 4 1 2 click on the Delete button gt for the user you wish to remove found in the Actions column on the left end side of the page An alert window is brought up on screen for confirm his action
10. on web xml see Section 3 When searching parameter was specified and value was set click search Result of searching appear below see Figure 4 20 2 Copyright 2006 2008 University of Dundee All Rights reserved Page 35 OMERO webadmin User Guide Search experimenters in Ldap Fields marked with an are mandatory Parameter sn E Tarkowska Search Results Username Name Email Actions atarkowska Tarkowska Aleksandra a tarkowska dundee ac uk Import Ca Figure 4 20 2 Search results The Actions column includes checkboxes that allow us to specify which of users should be imported If user has empty field it means that the user with this username or email address exists in the database Click in the Actions column to select users to import Select the import button If the Import is successful the displey will return to the Experimenters page see Figure 4 1 2 Copyright 2006 2008 University of Dundee All Rights reserved Page 36 OMERO webadmin User Guide 5 Troubleshooting The section contains a list of the most commonly problem solving It is the systematic search for the source of a problem so that it can be solved Troubleshooting is often a process of elimination eliminating potential causes of a problem in OMERO webadmin 5 1 What to do if cannot log in 5 2 What to do if cannot change my password Copyright 2006 2008 University of Dundee All Rights reserved Page
11. 1099 c topTenValue the number of users using most of the drive space see Section 4 18 The default value is 5 d usersListsDir path where the intermediary files will be stored with users details see Section 4 5 The default value is OMERO WebAdmin WARNING if you change this directory name please remember to change uploadRepositoryPath The default value is OMERO WebAdmin e IdapAttributes list of Ldap search attributes see Section 4 20 The defult values are sn givenName cn mail employeeNumber uidNumber gidNumber log4j properties Log4j is used to collect logs statement You can edit log4j properties to specify the location of the log file faces config xml sets the parameter ome admin bundle messages to specify the language used which supporting internationalization and accessibility default language en supported de nl fr sp it pl ect WARNING For adding new language needs to be duplicated the tag lt supported locale gt lang lt supported locale gt and creates the new file under WebAdmin src omero admin boundle with specified name Copyright 2006 2008 University of Dundee All Rights reserved Page 3 OMERO webadmin User Guide messages_LANG properties and context with translated sentences e message properties defines the internationalization context To build the application from your IDE you need to run build xml Every changes needs to rebuild the application To start the tool
12. 37 OMERO webadmin User Guide 5 1 What to do if I cannot log in The Login page gives the access to the application If you cannot log in check that CAPSLOCK on your keyboard is not on be sure that you use correct password be sure that the server details are correct for the OMERO server you wish to connect to ask administrator about activating your account Copyright 2006 2008 University of Dundee All Rights reserved Page 38 OMERO webadmin User Guide 5 2 What to do if cannot change my password If user is authenticated by LDAP server there is no possibility to change the password form the WebAdmin This link will not appear See Section 4 19 Copyright 2006 2008 University of Dundee All Rights reserved Page 39 OMERO webadmin User Guide Copyright 2006 2008 University of Dundee All Rights reserved Page 40
13. Default group should be one of the groups the user is a member of If not specified the newly created user is added to the internal default group If you want the user to be an administrator tick the Administrator box If you want the user to be an active user user can log in to the application tick the Active box Copyright 2006 2008 University of Dundee All Rights reserved Page 10 OMERO webadmin User Guide Add New Scientist Username userl First name Example Middle name Last name Example Email user L email com Institution Lab Administrator Active wi Default group default HH Other groups Figure 4 3 1 Create a new user Copyright 2006 2008 University of Dundee All Rights reserved Page 11 OMERO webadmin User Guide 4 4 How to add list new users in the one time The different possibility to add new users is to add them from an additional source For this reason should be prepared file with user s details At he moment there is possibility to import only XLS Excel and CSV files Example Microsoft Excel file please find here see Figure 4 4 1 gt A B Cc D E F 1 Omename FirstName Middlename Lastname Email Institution 2 userl John A Smith1 j smith email com Laboratory 1 3 4 Figure 4 4 1 Example content of file To add new users click on the Import button in the toolbar to display the import file tree see Figure 4 1 2 Click on the Upload new File button
14. Open Microscopy Environment Project Open Microscopy Environment Author Aleksandra Tarkowska Version 3 0 Beta 3 0 Date 2008 05 06 OMERO webadmin User Guide open microscopy environment Copyright 2006 2008 University of Dundee All Rights reserved OMERO webadmin User Guide Table Of Contents De AW OGU CUM a TEE TA E A A E E T 1 Dy GlOSSANY ociera asiana aieea isasara io a iaraa iira ridia eii 2 3 Technical background and configuration cccssessseeeeeeeeeeeeeeeeeeeeeeeees 3 A HOW tO QO e aE a E Sarrea i 5 A1 HOw to log IM cisdisscanttertanisassiiddasieenidensnnddinidapiinadeaisiuainsiinnnimaeentenadannbinauans 6 4 2 HOW to manage USES tistics iiaesanidiednnsdiierisiseemnsincniaaatianderlnatd 8 4 3 How to add ai new User cxisapsscivecerrssarsigaskiachsnbiidiivndiesissendarixinaniniarhintiatnn 10 4 4 How to add list new users in the one time ccccceesseeeeeeeeeeeeenees 12 A D HOW to delete a USER cirissiusssnatansenasetrisnnicacanceisnbiasinosusnianlia pie sintdnandaiins 16 4 6 How to edit an existing user s AetailS cccccsssseeeeeeeeeeeeeeeeeeeeeeeeeeeees 17 4 7 How to deactivate an account seesesssnnnnennnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnmnnn 20 4 8 How to modify the list of groups the user belongs t0 ss ssss0 21 4 9 How to Set user aS administrator secceceeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeees 23 4 10 HOW to MANAGE QIOUDS 2 sesisssiciicsivevsssinvai
15. actactorcesesiunaduwsiienccvtanccadaanaunnes 24 B11 HOW toadd NEW grOUp iaicasaisinsiinssasseinssdanbanderscinisentascidavixevanisnertananiaans 25 4 12 HOW t delete a group siiiaitsiinstsnsisnsinsiiiassdoiicedssiinadiundivceeriiednnddansiiaes 26 4 13 HOW t edit a Group jiscsciicciistsesinsatiridiedieesindiiendinniaanniiannseaainatidadaiawaiie 27 4 14 How to manage users within a group cccsseeeeeeeeeeeeeeeeeeeeeeeeeeeeeeees 28 4 15 How to manage enumeratiOns ccsseccceeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeeees 29 4 16 How to add a new enumeration sscccccesseeeeeeeeeeeeeeeeeeeeeeeeeeeeeeees 30 4 17 How to edit an existing enumeration sssssssunnnnnnnnnunrrnnnnnnunnnnnnnnnnne 31 4 18 How to manage drive space unsesssssnunnennnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnmnnn 32 4 19 How to Manage my account suseeessssnnnnennnnnunnnennnnnnnnnnennnnnnnnn nnmnnn 33 4 20 How to search and add new users from Ldap cssssseeeeeeeeeeeeeeees 35 5 FRCS SO ELEN ateiases ais ctacteccsasavennsansiiencapesinctanendannnensnciwiateanmiabaectencteadinesiuance 37 5 1 What to do if 1 CANNGEIOG IN siiesiinssanssintidananiacacinisevinasiniavaxinivacatahaxanannie 38 Copyright 2006 2008 University of Dundee All Rights reserved OMERO webadmin User Guide 5 2 What to do if cannot Change My PASSWOM cccceseseeeeeeeeeeeseeeeeeees 39 Copyright 2006 2008 University of Dundee All Rights reserved
16. can log in to the system a User is not active and cannot log in to the system Copyright 2006 2008 University of Dundee All Rights reserved x x Le oE K z eeseecece 6 Page 8 OMERO webadmin User Guide ae User is in administration role User is authenticated by Ldap server Under the table will appear the data scroller if the list includes more than fifteen users Arrows or numbers are links and allows you to switch between pages kJ 122 CP co 19 found displaying 15 scientists 1 15 Page 1 2 Figure 4 2 2 List of Users Copyright 2006 2008 University of Dundee All Rights reserved Page 9 OMERO webadmin User Guide 4 3 How to add a new user To add a new user 1 Click on the Scientists button in the toolbar to display the list of existing users see Figure 4 1 2 2 Click on the Add new Scientist button F Then enter the following required information e Enter a login name identifying the new user field Username e Enter the user s first name field First Name e Enter the user s last name field Last Name Additional optional information can be entered e The user s middle name field Middle Name e The user s e mail address field Email e The institution the user is a member of field Institution Select Save to confirm To be a valid email address you need to enter a string including the following characters for at and for dot The
17. ce Click on the Drive Space button in the toolbar to display a graphical representation of the space currently available The graphics presents the space used by the number of users defined the topTenValue see Section 3 i e the number of users using most of the drive space Drive Space KB jason liain ason Rest of used space mike emma Free Space 68639204 KB Used Space 507800521 KB Figure 4 18 1 Drive space Copyright 2006 2008 University of Dundee All Rights reserved Page 32 OMERO webadmin User Guide 4 19 How to manage my account When user logs in with USER permission he she can change his her details and default group The user can modify the following required information e __ Edit the user s first name field First Name e Edit the user s last name field Last Name Additional optional information can be updated Edit the user s middle name field Middle Name Edit the user s e mail address field Email Edit the institution the user is a member of field Institution Select Save to confirm Modifying the username of a given user is not possible To be a valid email address you need to enter a string including the following characters for at and for dot Copyright 2006 2008 University of Dundee All Rights reserved Page 33 OMERO webadmin User Guide My Account Username userl First name Testl Middle name U Last name Userl Email tu
18. dle name Last name Email Institution Administrator Active Default group Other groups raj k Save si Change Password userl Testl U Userl tuserlim email com Laboratory 1 Cd wi l groupl HH default group laroup 1 group3 group4 7 Figure 4 6 1 Edit an existing user This section allows a user s password to be changed For changing password click on the Change password button Copyright 2006 2008 University of Dundee All Rights reserved Page 18 OMERO webadmin User Guide If user is authenticated by LDAP server it is not possibility to change the password form the WebAdmin This link will not appear Copyright 2006 2008 University of Dundee All Rights reserved Page 19 OMERO webadmin User Guide 4 7 How to deactivate an account To desactivate an account you need to uncheck the Active box see Figure 4 6 1 The user will no longer be able to connect to the OMERO server but the account is not deleted from the system Copyright 2006 2008 University of Dundee All Rights reserved Page 20 OMERO webadmin User Guide 4 8 How to modify the list of groups the user belongs to A user can belong to more than one group How create a group you can find on section Section 4 11 The list Other groups displays a collection of existing groups see Figure 4 8 1 From the Edit User page select groups single or multi selection multi selection
19. l background and configuration Web Admin is the basic application which allows managing users and groups in Omero server WebAdmin was build by the JavaServer Faces JSF which is a Java technology based Web application framework that simplifies the development of user interfaces for Java EE applications Unlike to other traditional request driven Model View Controller web frameworks JSF uses a component based approach The state of Ul components are saved when the client requests a new page and then they are restored when the request is returned Out of the box JSF uses JavaServer Pages for its display technology but JSF can also accommodate other display technologies JSF includes A set of APls for representing user interface components and managing their state handling events and input validation converting values defining page navigation and supporting internationalization and accessibility A default set of user interface components A server side event model State management Managed Beans JavaBeans created with dependency injection The list below presents the files that can be configured web xml is the main web application configuration file You can set the following parameters a defaultServerHost the value sets in the Hostname field of the login page see Section 4 1 The default value is localhost b defaultServerPort the value sets in the Port field of the login page see Section 4 1 The default value is
20. ng enumerations see Figure 4 1 2 2 Click on the Add new enumeration button F Then enter the following required information e Choose from the select list Type of enumeration e Enter the enumeration s name field Enumeration Name Add new enumeration Fields marked with an are mandatory Type of enumeration ome model enums ArcType B Enumeration name Save Figure 4 16 1 Add new enumeration To be a valid enumeraton name you need to enter a string which is not on the list If this name exist error message will appear Copyright 2006 2008 University of Dundee All Rights reserved Page 30 OMERO webadmin User Guide 4 17 How to edit an existing enumeration From the Enumerations page see Figure 4 1 2 click on the Edit button j in the Actions column Then modify the following required information e Edit the enumeration s name field Name Additional optional information can be updated e Delete enumeration by the button a Edit enumeration ome model enums ArcType Fields marked with an are mandatory Enumerations Actions 7 Hg Xe K a Ree eB ai Other Figure 4 17 1 edit type of Enumeration To be a valid enumeraton name you need to enter a string which is not on the list If this name exist error message will appear Copyright 2006 2008 University of Dundee All Rights reserved Page 31 OMERO webadmin User Guide 4 18 How to manage drive spa
21. ons button in the toolbar to display the list of existing enumerations see Figure 4 1 2 You can then perform various Actions add a new enumeration see Section 4 16 e edit enumeration see Section 4 17 e reset enumerations to default value see Figure 4 15 2 Add new enumeration Enumerations Actions bs ex le Ger fer lex lex Ger er fex lex ter ger er eer gt ome model enums AberrationCorrection ome model enums AcquisitionMode ome model enums ArcType ome model enums Binning ome model enums Coating ome model enums ContrastMethod ome model enums DetectorType ome model enums DimensionOrder ome model enums EventType ome model enums ExperimentType ome model enums Family ome model enums FilamentType ome model enums FilterType ome model enums Format ome model enums FrequencyMultiplication Name KN lt K lt J 12D D gt DM 27 found displaying 15 groups 1 15 Page 1 2 Figure 4 15 1 List of Enumerations On the table Actions column we can see two types of cleaning icons Te Enumeration values was changed and this button allows to reset to default values ka Enumeration values have oryginal values there is no reason to reset them Copyright 2006 2008 University of Dundee All Rights reserved Page 29 OMERO webadmin User Guide 4 16 How to add a new enumeration To add a new enumeration 1 Click on the Enumerations button in the toolbar to display the list of existi
22. serl email com Institution Laboratory 1 Default group group l FH Save Change Password Figure 4 19 1 Edit an existing user This section allows to change their password as well For changing password click on the Change password button If user is authenticated by LDAP server it is not possibility to change the password form the WebAdmin This link will not appear Copyright 2006 2008 University of Dundee All Rights reserved Page 34 OMERO webadmin User Guide 4 20 How to search and add new users from Ldap The different possibility to add new users is to search them in Ldap server if Ldap server was configured on omero properties Example of omero properties configuration file omero Idap config true false turn on off plugin omero dap urls Idap host port omero Idap usernamez if log in to Ldap require special user Not required omero Idap password for above user omero Idap base place from where starts subtree omero Idap groups groups omero ldap attributes attributes omero Idap values values of attributes To search and add new users click on the Search button in the toolbar to display the search page see Figure 4 1 2 Search experimenters in Ldap Fields marked with an are mandatory Parameter sn B f Search _ Figure 4 20 1 Search in Ldap Select box contains various parameters for searching on Ldap what is configured
23. tional field Description The owner of the group field Owner Select Save to confirm Edit group Fields marked with an are mandatory Group name groupl Description description for group 1 Owner root HH Save Figure 4 13 1 Edit group Copyright 2006 2008 University of Dundee All Rights reserved Page 27 OMERO webadmin User Guide 4 14 How to manage users within a group From the Groups page see Section 4 10 to manage users wihtin the selected group click on the Edit users in group button in the Actions column You can now add or remove users from a group e g system e To add users Select the users displayed in the left hand pane and click on g e To delete users Select the users displayed in the right hand pane and click on gt The displayed next to the user s name indicates that the currently selected group e g system is the default group of the user In that case it is not possible to delete the user from the group unless the user s default group is changed Scientists in group group1 root user user user8 user3 user9 user2 juser6 user5 userlO userll userl2 userl3 a userl4 fi userL5 userl6 userl7 f Save Figure 4 14 1 Manage users within a group Copyright 2006 2008 University of Dundee All Rights reserved Page 28 OMERO webadmin User Guide 4 15 How to manage enumerations To manage enumerations click on the Enumerati
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