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        Supermicro X6DHE-G2 motherboard
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1.                                                                                                                                                                                                                                               The Power Fail LED connection is  JF1   located on pins 5 and 6 of JF1  Pin 7  h Number   Definition  Refer to the table on the right for 5 Vcc  i ery 6 Control  pin definitions  Signal  OH LED  PWR Fail LED  and a    24 Pin ATX PWR Fns mepe rent u EA  Toa  ii BEE 20 19  DMN TE  Bank T Ba i  ssor DIMM 1A  Bank 1  Ground  lt   o NMI  ome DIN 2B  Bank 2   gt   i DIM 2A  Bank 2  ae X lt  Lolo x  hy STEN    DIMM 4B  Bank 4  Power LED  lt  ojo Vcc  2 OTM AA an    jS  Se SUPER     X6DH8 G2 R HDDLED  lt    o        vec    vem NIC1LED  lt    o   o   v    Es a  gt   z   NIC2 LED  lt  Vec  geron j rense w U ee  bag 9    ena   mE wo emg les allis Ower Fail LED  lt   ae scat Pa    om Eee id Tie 5 God            Reset Reset Button  tne 7902 8 J  Eeu SL Pat a E 4  E Ground             pwr  gt  Power Button  a 4 4 J  an i Seas chaem ens Liat N  CI Wot Qae laa wra sao sesreha J TE                   2 12    Chapter 2  Installation          Reset Button    The Reset Button connection is lo   cated on pins 3 and 4 of JF1  At   tach it to the hardware reset  switch on the computer case   Refer to the table on the right for  pin definitions     Power Button    The Power Button connection is  located on pins 1 and 2 of JF1   Momentarily contacting both pins  will 
2.             ER WoR pmeus   sata1  jPA  SCSI CHB Term  Ena  JwoL spqUsB23  saTaopst Ultra 320 SCSI CHB    Fan       SUPER  X6DH8 G2 X6DHE G2 User s Manual          2 8 Parallel Port  Floppy Hard Disk Drive and SCSI    Connections    Note the following when connecting the floppy and hard disk drive cables     e The floppy disk drive cable has seven twisted wires       A red mark on a wire typically designates the location of pin 1     e A single floppy disk drive ribbon cable has two connectors to provide for  two floppy disk drives  The connector with twisted wires always con   nects to drive A  and the connector that does not have twisted wires    always connects to drive B     Parallel  Printer  Port Pin Definitions                                                                                                                                                                                                                                                                                                                                                             7  J23   Parallel  Printer  Port Pin Number Function  Pin Number Function  Connector 1 Strobe    2 Auto Feed   3 Data Bit 0 4 Error   5 Data Bit 1 6 Init   The parallel  printer  port is lo  7 Data Bit2  8 SLCT IN   9 Data Bit3  10 GND  cated at J23  See the table on the 11 Data Bit4  12 GND      imiti 13 Data Bit 5 14 GND  right for pin definitions  15 Data Bite  16 GND  17 Data Bit 7 18 GND  19 ACK 20 GND  21 BUSY 22 GN
3.       Jumper  Position Definition       Pins 1 2  WD to Reset  Pins 2 3 WD to NMI  Open Disabled                MOS CLR  WD    SUPER    X6DH8 G2 X6DHE G2 User s Manual                VGA Enable Disable ven   Jaranle Disable   i mper Settin   JPG1 enables or disables the VGA    aPGt  a gt   Connector on the motherboard  Jumper P  i Position Definition  See the table on the right for Pins 1 2  Enabled  jumper settings  The default set  Ping   a  OlSabled                ting is enabled     Alarm Reset    Alarm Reset Jumper       The system will notify you in the Settings      JP14   event of a power supply failure  a  This feature assumes that Super  Position   Definition       Open Normal  Closed   Reset Alarm          micro redundant power supply          units are installed in the chassis   If you only have a single power  supply installed  please do not  connect anything to this header to  prevent false alarms  See the  table on the right for jumper set                                                                                                                                                                                                                                                                                          VGA Enable  Alarm Reset  aA F in ATXPWR Fan  IP Tain  lil BE RAPIN ATEPWE   Force PWR ON  m e wr  PWR b  Mouse    DIMM 1B  Bank 1  O  ans DIMM 1A  Bank 1  E  OMT  se  DIMM 2B  Bank 2  5  crus  DIMM 2A  Bank 2   3 DIMM 3B  Bank 3  S  a  if DIMM 3A  Ba
4.      Speaker Connector Pin    Definitions  JD1                       PWR LED  SPKR    Pin  Number  Function Definition  4   Power  5 Key No connection  6 Key  7 Speaker data  Fan1       SUPER    X6DH8 G2 X6DHE G2 User s Manual          Wake On Ring    The Wake On Ring header is des   ignated JWOR  This function al   lows your computer to receive  and be  woken up  by an incom   ing call to the modem when in sus   pend state  See the table on the  right for pin definitions  You must  have a Wake On Ring card and  cable to use this feature     Wake On LAN    The Wake On LAN header is des     Wake on Ring  Pin Definitions   JWOR        Pin   Number   Definition  1 Ground   2 Wake up                   Wake On LAN Pin  Definitions  JWOL                                                                                                                                                                                                                                                                                                                                                                                                                                         ignated WOL  See the table on the Pin  right for pin definitions  You must Number   _ Definition  9 P aye 1  5V Standby  enable the LAN Wake Up setting in 2 Ground  i 3 Wake u  BIOS to use this feature  You P  must also have a LAN card with a  Wake on LAN connector and  cable   Crna tard BA  aparer ATXP   ET RON an a A E  2 DIMM 1B 
5.     5  In the Array Properties dialog box  select Delete and press Enter  The  following prompt is displayed    Warning   Deleting the array will render array unusable  Do you  want to delete the array  Yes No            RAID 1 only   the following prompt is also displayed     Deleting the partition will result in data loss  Do you also want to  delete the partition   Yes No            6  Press Yes to delete the array or partition or No to return to the previous  menu     7  Press Esc to return to the previous menu     B 6    Appendix B  Software Installation Instructions          Creating Arrays    Before creating arrays  make sure the disks for the array are connected  and installed in your system  Note that disks with no usable space  or disks  that are un initialized are shown in gray and cannot be used  See I nitializ   ing Disk Drives     To create an array     1 Turn on your computer and press Ctrl A when prompted to access the  ARC utility    2 From the ARC menu  select Array Configuration Utility Main Menu   ACU   as shown on the first screen on page B 5      3 From the ACU menu  select Create Array        4 Select the disks for the new array and press Insert  as the screen shown  below        Note  To deselect any disk  highlight the disk and press Delete        E oe    WD3606D  OOELX1 ah ie 46B    01 WDC WD3606D  OOELXI 34  46B    Select drives to create rra J       5 Press Enter when both disks for the new array are selected  The Array  Properties menu displays  a
6.    32h Test CPU bus clock frequency   33h Initialize Phoenix Dispatch Manager   36h Warm start shut down   38h Shadow system BIOS ROM   3Ah Auto size cache   3Ch Advanced configuration of chipset registers   3Dh Load alternate registers with CMOS values   4th Initialize extended memory for RomPilot   42h Initialize interrupt vectors   45h POST device initialization   46h 2 1 2 3 Check ROM copyright notice   47h Initialize 120 support   48h Check video configuration against CMOS   49h Initialize PCI bus and devices   4Ah Initialize all video adapters in system   4Bh QuietBoot start  optional    4Ch Shadow video BIOS ROM   4Eh Display BIOS copyright notice   4Fh Initialize MultiBoot   50h Display CPU type and speed   51h Initialize EISA board   52h Test keyboard   54h Set key click if enabled   55h Enable USB devices   58h 2 2 3 1 Test for unexpected interrupts   59h Initialize POST display service   5Ah Display prompt    Press F2 to enter SETUP      5Bh Disable CPU cache    A 2    Appendix A  BIOS POST Codes          POSTCode Description    5Ch  60h  62h  64h  66h  67h  68h  69h  6Ah  6Bh  6Ch  6Eh  70h  72h  76h  7Ch  7Dh  7Eh  80h  81h  82h  83h  84h  85h  86h  87h    88h  89h  8Ah  8Bh  8Ch  8Fh  90h  91h  92h  93h  95h  96h  97h  98h    Test RAM between 512 and 640 kB   Test extended memory   Test extended memory address lines  Jump to UserPatch1   Configure advanced cache registers  Initialize Multi Processor APIC   Enable external and CPU caches   Setup System Management
7.    Array Configuration Utility  Disk Utilities             Arrow   eys to move cursor   lt Enter gt  to select option   lt  sc     A    Hur       Managing Arrays    Select this option to view array properties  and delete arrays  The following  sections describe the operations Of  Managing Arrays      To select this option  use the arrow keys and the  lt enter gt  key to select   Managing Arrays  from the main menu  as shown above         SUPER    X6DH8 G2 X6DHE G2 User s Manual          Viewing Array Properties       To view the properties of an existing array   1  At the BIOS prompt  press Ctrl A   2  From the ARC menu  select Array Configuration Utility  ACU      3  From the ACU menu  select Manage Arrays  as shown on the previous  screen      4  From the List of Arrays dialog box  select the array you want to view  and press Enter     The Array Properties dialog box appears  showing detailed    information on the array  The physical disks associated with the array are  displayed here     5  Press Esc to return to the previous menu     Deleting Arrays     Warning  Back up the data on an array before you delete it to prevent the  loss of data  Deleted arrays cannot be restored           To delete an existing array        1  Turn on your computer and press Ctrl A when prompted to access the  ARC utility     2  From the ARC main menu  select Array Configuration Utility  ACU    3  From the ACU menu  select Manage Arrays   4  Select the array you wish to delete and press Delete 
8.    CPU  If the lever is   only partly raised    damage to the Processor  socket or CPU may  result         installed     Triangle       Mounting the Motherboard in the Chassis    All motherboards have standard mounting holes to fit different types of  chassis  Make sure the locations of all the mounting holes for both the  motherboard and the chassis match  Although a chassis may have both  plastic and metal mounting fasteners  metal ones are highly recommended  because they ground the motherboard to the chassis  Make sure the metal  standoffs click in or are screwed in tightly  Then use a screwdriver to  secure the motherboard onto the motherboard tray     2 5    SUPER    X6DH8 G2 X6DHE G2 User s Manual          2 3 Installing DIMMs    Note  Check the Supermicro web site for recommended memory modules   http   www supermicro com support faqs         CAUTION  Exercise extreme care when installing or removing DIMM  modules to prevent any possible damage  Also note that the  memory is interleaved to improve performance  see step 1         DIMM Installation  See Figure 2 2     1  Insert the desired number of DIMMs into the memory slots  starting with  Bank 1  The memory scheme is interleaved so you must install two  modules at a time  beginning with Bank 1  then Bank 2  and so on     2  Insert each DIMM module vertically into its slot  Pay attention to the  notch along the bottom of the module to prevent inserting the DIMM  module incorrectly    3  Gently press down on the DIMM 
9.    Write Through  Write Protect  and Write Back     Cache Base 512K 640K    If enabled  this feature will allow the data stored in the memory area   512K 640K to be cached  written  into a buffer  a storage area in the  Static DRM  SDROM  or written into L1  L2  L3 cache inside the CPU to  speed up CPU operations  Select Uncached to disable this function   Select Write Through to allow data to be cached into the buffer and  written into the system memory at the same time  Select Write Protect to  prevent data from being written into the base memory area of Block 512   640K  Select Write Back to allow the CPU to write data back directly from  the buffer without writing data to the System Memory for fast CPU data  processing and operation  The options are Uncached  Write Through   Write Protect  and Write Back     4 8    Chapter 4  BIOS          Cache Extended Memory    If enabled  this feature will allow the data stored in the extended memory  area to be cached  written  into a buffer  a storage area in the Static  DRM  SDROM  or written into L1  L2  L3 cache inside the CPU to speed  up CPU operations  Select Uncached to disable this function  Select  Write Through to allow data to be cached into the buffer and written  into the system memory at the same time  Select Write Protect to  prevent data from being written into the base memory area of beyond 1  MB  Select Write Back to allow the CPU to write data back directly from  the buffer without writing data to the System Memor
10.   Browser Edition    SUPERMICRO Supero Doctor III    Build driver diskettes and manuals       BAED I Auto Start Up Next Time    For more information  please visit SUPERMICRO s web site       Driver Tool Installation Display Screen       Cs bo ko lko  po  po       SUPERMICRO Computer Inc        Note  Click the icons showing a hand writing on the paper to view the  readme files for each item  Click the computer icons to the right of these  items to install each item  from top to the bottom  one at a time  After  installing each item  you must re boot the system before moving  on to the next item on the list  The bottom icon with a CD on it allows  you to view the entire contents of the CD       Please refer to the Adaptec User s Guide for the installation of  Adaptec s Serial ATA RAID Controller Driver  Adaptec s User s  Guide is included in the CD  You can also download a copy of the  user s guide from our web site      B 21    SUPER    X6DH8 G2 X6DHE G2 User s Manual          Supero Doctor Ill    The Supero Doctor III program is a Web base management tool that supports  remote management capability  It includes Remote and Local Management  tools  The local management is called the SD III Client  The Supero Doctor III  program included on the CDROM that came with your motherboard allows  you to monitor the environment and operations of your system  Supero  Doctor III displays crucial system information such as CPU temperature   system voltages and fan status  See the Figure be
11.   NMI  Non Maskable  Interrupt   SMI  System Management Interrupt  and SCI  System Control  Interrupt      4 11    SUPER   X6DH8 G2 X6DHE G2 User s Manual          SERR Signal Condition    This setting specifies the ECC Error conditions that an SERR  is to be  asserted  The options are None  Single Bit  Multiple Bit and Both     Enabling Multi Media Timer    Select Yes to activate a set of timers that are alternative to the traditional  8254 timers for the OS use  The options are Yes and No     USB Function    Select Enabled to enable the function of USB devices specified  The  settings are Enabled and Disabled     Legacy USB Support  This setting allows you to enable support for Legacy USB devices  The  settings are Enabled and Disabled     gt    Advanced Processor Options   Access the submenu to make changes to the following settings   CPU Speed  This is a display that indicates the speed of the installed processor   Hyper threading     Available when supported by the CPU      Set to Enabled to use the Hyper Threading Technology  which will result  in increased CPU performance  The options are Disabled or Enabled     Machine Checking     Available when supported by the CPU      Set to Enabled to activate the function of Machine Checking and allow  the CPU to detect and report hardware  machine  errors via a set of  model specific registers  MSRs   The options are Disabled or Enabled     C1 Enhanced Mode     Available when supported by the CPU      Set to Enabled to enable E
12.   Pressing the  power button again will cause the whole system to wake up  During the  SoftOff state  the ATX power supply provides power to keep the required  circuitry in the system alive  In case the system malfunctions and you want  to turn off the power  just press and hold the power button for 4 seconds   This option can be set in the Power section of the BIOS Setup routine     External Modem Ring On    Wake up events can be triggered by a device such as the external modem  ringing when the system is in the SoftOff state  Note that external modem  ring on can only be used with an ATX 2 01  or above  compliant power  supply     Wake On LAN  WOL     Wake On LAN is defined as the ability of a management application to re   motely power up a computer that is powered off  Remote PC setup  up   dates and asset tracking can occur after hours and on weekends so that  daily LAN traffic is kept to a minimum and users are not interrupted  The  motherboard has a 3 pin header  WOL  to connect to the 3 pin header on a  Network Interface Card  NIC  that has WOL capability  Wake On LAN must  be enabled in BIOS  Note that Wake On LAN can only be used with an ATX  2 01  or above  compliant power supply     Chapter 1  Introduction          1 6 Power Supply    As with all computer products  a stable power source is necessary for  proper and reliable operation  It is even more important for processors that  have high CPU clock rates     The X6DH8 G2 X6DHE G2 can only accommodates 24 pin ATX
13.   This feature allows the user to select the transfer mode  The options  are Standard  Fast PIO1  Fast PlO2  Fast PIO3  Fast PIO4  FPIO3 DMA1  and FPIO4 DMA2     Ultra DMA Mode    This feature allows the user to select the Ultra DMA Mode  The options  are Disabled  Mode 0  Mode 1  Mode 2  Mode 3  Mode 4 and Mode 5     System Memory    This display informs you the size of system memory being detected by the  BIOS     Extended Memory    This display informs you the size of extended memory being detected by  the BIOS     4 4 Advanced Setup    Choose Advanced from the Phoenix BIOS Setup Utility menu with the arrow  keys  You should see the following display  The items with a triangle beside  them have sub menus that can be accessed by highlighting the item and pressing   lt Enter gt   Options for PIR settings are displayed by highlighting the setting option  using the arrow keys and pressing  lt Enter gt   All Advanced BIOS Setup options  are described in this section        Main Advanced Security Boot Exit    Item Specific Help    Memory Cache  PCI Configuration Select Boot features  Advanced Chipset Control  Advanced Processor Options  1 0 Device Configuration  DMI Event Logging   Console Redirection  Hardware Monitor    Di A os HO ee Be he          Fi TL     F   Esc ed Enter Fi     4 6    Chapter 4  BIOS           gt  Boot Features  Access the submenu to make changes to the following settings   Quick Boot Mode    If enabled  this feature will speed up the POST  Power On Self T
14.   you may have to initialize it before  you can use it as part of an array  Drives attached to the controller must be  initialized before they can be used in an array     Caution  Initializing a disk overwrites the partition table on the disk and  makes any data on the disk inaccessible  If the drive is used in an array   you may not be able to use the array again     Do not initialize a disk that is part of a boot array  To determine which  disks are associated with a particular array  please refer to Viewing Array  Properties     To initialize drives        1  Turn on your computer and press Ctrl A when prompted to access the  ARC utility    2  From the ARC menu  select Array Configuration Utility  ACU   as  shown in the screen below      4 Adaptec RAID Configuration Utility  gt     Options    Array Configuration Utility    Disk Utilities    to select option   lt Esc gt               3  Select Initialize Drives  as shown in the screen below      B 13    SUPER    X6DH8 G2 X6DHE G2 User s Manual    Main Menu   anage Arrays  reate Array  dd Delete Hotspare  initialize Drives       4  Use the up and down arrow keys to highlight the disk you wish  to initialize and press Insert  as shown in the screen below         Select drives for initialization Selected li      00 WDC WD3606D O0ELX1 34 46B  61 WDC WD360GD O0ELX1 o 34  46B                Appendix B  Software Installation Instructions    5  Repeat Step 4 so that both drives to be initialized are selected  as shown  in the scree
15.  Amx PwR   EPET oy Fan  Epin  7 me ien  nes arca e  aar DIMM 1B  Bank 1  aL  pseon DIMM 1A  Bank 1  E  ponje DIMM 2B  Bank 2  5   DIMM 2A  Bank 2  oe rs  z DIMM 3B  Bank 3  m s 8l  EE DIMM 3A  Bank 3  571   DIMM 4B  Bank 4  ega  Sa DIMM 4A  Bank 4  a4   gt  cpu2    aa SUPER    X6DH8 G2 a     wn ii  E    A pemn  E  supey g i   Xe POrEpxas 10 nse  i mad   a  BGLAN pat a a  oun  x4 PCLEpx  4 WD Enable Fog  IPS  3  82546  te  A  E Panenan SRA Erabi 3  GLAN fd  Enabie 7902 3  Eur PCIX 100 wiz Pa ef     E ramom 7        SMB  JWOR Ce aJ IPA2CJSCSICHA Torm  Ena LIAL             JwoL                    SATA0     s1     JPA3SISCSI CHB Term  Ena      Ultra 320 SCSI CHB       Fan             2 19          SUPER    X6DH8 G2 X6DHE G2 User s Manual          2 6    Jumper Settings    Explanation of  Jumpers    To modify the operation of the  motherboard  jumpers can be  used to choose between  optional settings  Jumpers  create shorts between two pins  to change the function of the  connector  Pin 1 is identified  with a square solder pad on  the printed circuit board  See  the motherboard layout pages  for jumper locations    Note  On two pin jumpers    Closed  means the jumper is  on and  Open  means the  jumper is off the pins     GLAN Enable Disable    JPL1 enables or disables the  GLAN port s  on the motherboard   See the table on the right for  jumper settings  The default set   ting is enabled     m E ayo  TAN 2  GLAN     Seapciepe aa vo baag hs  52546  we scsi  GLAN E Poxas RAT Enabl
16.  Bank 1  Be i  UsBo t DIMM 1A  Bank 1    le  pOM1 jja DIMM 2B  Bank 2  56  DIMM 2A  Bank 2  i  5  z DIMM 3B  Bank 3  a PIG  ES DIMM 3A  Bank 3  5   l  DIMM 4B  Bank 4  penge     8 DIMM 4A  Bank 4  g  cpu2 3  PPA SUPER    X6DH8 G2 36  ane eg  North  lt a      Brage 1  Enable   DETCH Intru  T  RAGE        ol xE PCLEpx Be 320 eM  x m zl ala  of XePCHEpR AS 10 cree fH ao eyeye  cmos CONE  Horan si sake Eai  a   mlale  en  lt   E ransu  PA Enable 3  GLAN 8  E put 3 PCI X  2 100 MHz PH RoN 8  Ceo  pea Baene ua Tem Ene Lat      WOR  WOL    2 18          Chapter 2  Installation       SMB    A System Management  header is located at J22  Connect  the appropriate cable here to uti   lize SMB on your system     SMB Power  I C     Bus    Fan Header Pin Definitions              J22   Pin  Number Definition  1 Data  2 GND  3 CLK  4 NC          Caution  These fan headers  are DC power                                                                                                                                                                                                                                                                                                                                                                    SMB PWR  Connector Pin Definitions  J24   Pin   Definition  l2C Connector  J24   located be  1 aa  ata  tween the PWR ForceOn Header 3 N A  and the PWR Fault header  moni    NA  tors the status of power supply   fan and system temperatures   R SMB  J E   ypa 24e
17.  EEh  EFh  FOh  Fih  F2h  F3h  F4h  F5h  F6h  F7h    Initialize the chipset  Initialize the bridge  Initialize the CPU   Initialize system timer  Initialize system I O  Check force recovery boot  Checksum BIOS ROM  Go to BIOS   Set Huge Segment  Initialize Multi Processor  Initialize OEM special code  Initialize PIC and DMA  Initialize Memory type  Initialize Memory size  Shadow Boot Block  System memory test  Initialize interrupt vectors  Initialize Run Time Clock  Initialize video   Initialize System Management Manager  Output one beep   Clear Huge Segment  Boot to Mini DOS   Boot to Full DOS      Ifthe BIOS detects error 2C  2E  or 30  base 512K RAM error   it displays an additional  word bitmap  xxxx  indicating the address line or bits that failed  For example     2C  0002    means address line 1  bit one set  has failed     2E 1020  means data bits 12  and 5  bits 12 and 5 set  have failed in the lower 16 bits  The BIOS also sends the  bitmap to the port 80 LED display  It first displays the checkpoint code  followed by  a delay  the high order byte  another delay  and then the loworder byte of the error   It repeats this sequence continuously     AS    SUPER   X6DH8 G2 X6DHE G2 User s Manual       Notes    Appendix B  Software Installation Instructions          Appendix B  Installing Software Drivers and Windows  Operating System    After all the hardware has been installed  you must first configure the  Adaptec Embedded Serial ATA RAID Driver before you install the Wi
18.  Mode  SMM  area  Display external L2 cache size   Load custom defaults  optional    Display shadow area message   Display possible high address for UMB recovery  Display error messages   Check for configuration errors   Check for keyboard errors   Set up hardware interrupt vectors   Initialize Intelligent System Monitoring  Initialize coprocessor if present   Disable onboard Super I O ports and IRQs  Late POST device initialization   Detect and install external RS232 ports  Configure non MCD IDE controllers   Detect and install external parallel ports  Initialize PC compatible PnP ISA devices  Re initialize onboard I O ports    Configure Motherboard Configurable Devices   optional    Initialize BIOS Data Area   Enable Non Maskable Interrupts  NMIs   Initialize Extended BIOS Data Area   Test and initialize PS 2 mouse   Initialize floppy controller   Determine number of ATA drives  optional   Initialize hard disk controllers   Initialize local bus hard disk controllers  Jump to UserPatch2   Build MPTABLE for multi processor boards  Install CD ROM for boot   Clear huge ES segment register   Fix up Multi Processor table   1 2 Search for option ROMs  One long  two short  beeps on checksum failure    A 3       SUPER   X6DH8 G2 X6DHE G2 User s Manual    POSTCode Description    99h Check for SMART Drive  optional    9Ah Shadow option ROMs   9Ch Set up Power Management   9Dh Initialize security engine  optional    9Eh Enable hardware interrupts   9Fh Determine number of ATA and SCSI 
19.  User Password Is     Set Supervisor Password  Set User Password    Fixed disk boot sector   Normal   Password on boot   Disabled              Fi tL ei si F   Esc    gt  Enter Fi     Supervisor Password Is     This item indicates whether a supervisor password has been entered for  the system  Clear means such a password has not been used and Set  means a supervisor password has been entered for the system     User Password Is     This item indicates whether a user password has been entered for the  system  Clear means such a password has not been used and Set means  a user password has been entered for the system     Set Supervisor Password    When the item  Set Supervisor Password  is highlighted  hit the  lt Enter gt  key   When prompted  type the Supervisor s password in the dialogue box to set  or to change supervisor s password  which allows access to BIOS     Set User Password    When the item  Set User Password  is highlighted  hit the  lt Enter gt  key   w i      4 18    Chapter 4  BIOS          change the user s password  which allows access to the system at boot   up     Fixed Disk Boot Sector    This setting may offer some protection against viruses when set to Write  Protect  which protects the boot sector on the hard drive from having a  virus written to it  The other option is Normal     Password on Boot    This setting allows you to decide if a password is required to be entered  when the system boots up  The options are Enabled  password required   and Disable
20.  channel A and JPA3  is for SCSI channel B  The default  setting is open to enable  terminate   both SCSI channels    Note  the  manufacture default setting is   Open   For SCSI to function  properly  please do not change  the default setting   See the  table on the right for jumper set   tings                          as Fant PEE ae    ep  h DNNE ET Bi i                                 DNN 7A EiT if  OMT  36 DIMM 2B  Bank 2                      DIMM 2A  Bank 2  bia  3 DIMM 3B  Bank 3   H DIMM 3A  Bank 3    DIMM 4B  Bank 4                                            DIMM 4A  Bank 4           SUPER    X6DH8 G2                    Ss cruz  am  awe                a Brage    E Enable Ell g H intr                                                                                                                            z  mia XE PCE ps  6  a  F fs   ilala  me e  onlen      Lett ap   lt a  Sa  sae  an al              pere j SCSI Enable    Enable  Eeu    PCLX  2 100 MHE  PCIX  1 100 MHE ZCR   m    WoR peos      m Swot AT                   SCSI CH A B                Term  Enable       2 24    Chapter 2  Installation          2 7 Onboard Indicators    G bit LAN Speed LED                   GLAN LEDs Indicator  LED  Color Definition  i i Off No Connection  Each Gigabit Ethernet LAN port isn Joona   has two LEDs  The amber LED in  Orange 1 GHz  dicates activity while the other G bit LAN Activity LED  LED may be green  orange or off Indicator  to indicate the speed of the con  LED o    5 Col
21.  clock rate     Large Disk Access Mode   This setting determines how large hard drives are to be accessed  The  options are DOS or Other  for Unix  Novelle NetWare and other operating  systems      gt  Advanced Chipset Control   Access the submenu to make changes to the following settings     Force Compliance Mode    This feature allows you to enable the PCI Express Compliance Mode  The  options are  Disabled or Enabled     Memory RAS Feature Control    Select this option in order to enable the special feature of DIMM sparing  or memory mirroring  The options are Mirroring  Sparing and Standard     Clock Spectrum Feature    If Enabled  the Phoenix BIOS will monitor the level of Electromagnetic  Interference caused by the components and will attempt to decrease the  interference whenever needed  The options are Enabled and Disabled     Memory Remap Function Control    PCI memory resources will overlap with the physical memory if 4GB of  memory or above is installed on the motherboard  When this occurs  enable  this function to reallocate the overlapped physical memory to a location  above 4GB to resolve the memory overlapping situation     DRAM Data Integrity Mode    If enabled  this feature allows the data stored in the DRMA memory to be  integrated for faster data processing  The options are 72 bit ECC  144   bit ECC  Auto and Disabled     ECC Error Type    This setting lets you select which type of interrupt to be activated as a  result of an ECC error  The options are None
22.  cpu2          Reboot  Opt  Enable                                  Reset JOH1Fan2  P14 OH     Alrm                                                                                                               X6DH8 G2  SUPER   X   Guana   North  T Bridge  E Enable  RAGE  2  X8 PCI Epx  6  x   supel   X8 PCLEpx  5 vo icHsR   Clr  cmos        at y   LAN z Wo Enabi   CTLR x4 PCI Epx  4  82546   E PCI X  3 133 MHZ E Enable   GLAN  Enable 7902     _NPL1 scsi  EHP Bpoixaa too mz aR                                PCI X  1 100 MHz ZCR                            JPA2  SCSI CHA Term  Ena  JPA3    SCSI CHB Term  Ena      Ultra 320 SCSI CHB          Ultra 320 SCSICHA          JA                         J22 382  JWOR Mi  SATA1  WoL  ywot    Lsa Apar    Fana       FP USB 4    FP USB 2 3    2 15    COM2    SUPER    X6DH8 G2 X6DHE G2 User s Manual          GLAN  Giga bit Ethernet  Ports     Two G bit Ethernet ports are lo   cated beside the COM2 port on the  IO backplane  This port accepts  RJ45 type cables     ATX PS 2 Keyboard and PS 2 Keyboard                                                                                                                                                                                                                                                                                                                                                                                                                                                    PS 2 Mouse Ports 
23.  power sup   plies  Although most power supplies generally meet the specifications re   quired by the CPU  some are inadequate  You should use one that will  supply at least 400W of power connector  In addition  the 12V 4 pin power  supply  J32    is also required to ensure adequate power supply to the  system  Also your power supply must supply 1 5A for the Ethernet ports     NOTE  The   12V 8 pin Aux  Power Connector  J1D1  is also required  to support Intel Xeon CPUs  Failure to provide this extra power will  result in CPU PWR Failure  See Section 2 5 for details on connect   ing the power supply     It is strongly recommended that you use a high quality power supply that  meets ATX power supply Specification 2 01 or above  It must also be SSI  compliant  info at http   www ssiforum org    Additionally  in areas where  noisy power transmission is present  you may choose to install a line filter  to shield the computer from noise  It is recommended that you also install a  power surge protector to help avoid problems caused by power surges     1 7 Super I O    The disk drive adapter functions of the Super I O chip include a floppy disk  drive controller that is compatible with industry standard 82077 765  a data  separator  write pre compensation circuitry  decode logic  data rate selec   tion  a clock generator  drive interface control logic and interrupt and DMA  logic  The wide range of functions integrated onto the Super I O greatly  reduces the number of components req
24.  refer to  the Adaptec RAID Controller User s Guide   Emb_SA_RAID_UG pdf  in the  CD that came with this motherboard  You can also download a copy of  Adaptec s User s Guide from our web site at www supermicro com      Using the Adaptec RAID Configuration Utility  ARC    The Adaptec RAID Configuration Utility is an embedded BIOS Utility  includ   ing     Array Configuration Utility  Use this utility when you want to create  config   ure and manage arrays       Disk Utilities  Use this option to format or verify disks     To run the Adaptec RAID Configuration Utility  you will need to enable the  RAID function in the system BIOS  refer to Chapter 4 for System BIOS  Configurations   and then  press the  lt Ctrl gt  and  lt A gt  keys simultaneously  when prompted to do so during the system startup   Refer to the previous  page for detailed instructions        Note  To select an option  use the arrow keys to highlight the item and  then press the  lt Enter gt  key to select it  To return to the previous menu   press the  lt ESC gt  key      A  Using the Array Configuration Utility  ACU        The Array Configuration Utility  ACU  enables you to create  manage  and  delete arrays from the controller s BIOS  add and delete spare drives  and  initialize drives  During the system startup  press  lt Ctrl gt  and  lt A gt  key simulta   neously  and the main menu will appear     B 4    Appendix B  Software Installation Instructions       4 Adaptec RAID Configuration Utility  gt     i 
25.  support for processor protection   5V standby alert  LED   e Power up mode control for recovery from AC power loss   e Auto switching voltage regulator for CPU core   e System overheat LED and control   e Chassis intrusion detection   e System resource alert    1 6    Chapter 1  Introduction          ACPI Features   e Microsoft OnNow   e Slow blinking LED for suspend state indicator  e Main switch override mechanism    Onboard I O   e Support Adaptec 7902 dual channel Ultra 320 SCSI   X6DH8 G2 only   e One IPMI 2 0 socket   e Intel 8254x Gigabit Ethernet controller  PCI X 133    e 2 EIDE Ultra DMA 100 bus master interfaces   e 2 SATA ports  w RAIDO  RAID1  JBOD support    e 1 floppy port interface   e 2 serial ports   e 1 EPP ECP Parallel Port   e PS 2 mouse and PS 2 keyboard ports   e Up to 5 USB 2 0  Universal Serial Bus   2 ports  3 Headers   e Super I O    Other   e Internal external modem ring on   e Wake on LAN  WOL    e Console redirection     Onboard Fan Speed Control by Thermal Management via BIOS       CD Diskette_ Utilities  e BIOS flash upgrade utility and device drivers       Dimensions     ATX Ext  12  x 13 05   304 8 x 331 5 mm     SUPER   X6DH8 G2 X6DHE G2 User s Manual                                                                                                                                                                                                                                                                      1 PCI X   Nocona ceu 1  NOCONA CP
26.  your distributor or reseller for  troubleshooting services  They should know of any possible problem s   with the specific system configuration that was sold to you        3 2    Chapter 3  Troubleshooting          1  Please go through the    Troubleshooting Procedures    and    Frequently  Asked Question     FAQ  sections in this chapter or see the FAQs on our  web site  http   www supermicro com support faqs   before contact   ing Technical Support    2  BIOS upgrades can be downloaded from our web site at  http   www supermicro com support bios    Note  Not all BIOS can be flashed depending on the modifications   to the boot block code           3  If you still cannot resolve the problem  include the following information   when contacting Super Micro for technical support     Motherboard model and PCB revision number    BIOS release date version  this can be seen on the initial display when  your system first boots up      System configuration   An example of a Technical Support form is on our web site at  http   www supermicro com support contact cfm    4  Distributors  For immediate assistance  please have your account number  ready when placing a call to our technical support department  We can  be reached by e mail at support supermicro com or by fax at     408  503 8000  option 2     3 3 Frequently Asked Questions    Question  What are the various types of memory that my mother   board can support     Answer  The X6DH8 G2 X6DHE G2 has eight 240 pin DIMM slots that s
27. 3    SUPER   X6DH8 G2 X6DHE G2 User s Manual          Figure 1 2  SUPER   X6DH8 G2 X6DHE G2 Motherboard Layout     not drawn to scale                                                                                                                                                                                                                                                                                                                                                                                                                                                     pag   24 Pin ATX PWR Fan7     PWRa  PW  S  8 pin  Fan6 Fan  4 Pin Force PWR ON Bus  Fault PWR   KET PWR apg TDI  Mouse  Ee a 5  DIMM 1B  Bank 1  oa E   a  USBO 1 DIMM 1A  Bank 1  g  zl5  FOM1 u6 DIMM 2B  Bank 2  fe  CPU1  DIMM 2A  Bank 2  ri    5  z DIMM 3B  Bank 3  o  B  Er paan Ped  EB DIMM 3A  Bank 3  s I     DIMM 4B  Bank 4  Reboot  os Opt  Enable  DIMM 4A  Bank 4  y  S cPU2 S       a    ca UPER    X6DH8 G2    Sm    3 a  GLAN2 83  North  lt a  Bridge  aPGNGA Z MICH Intru  Tenable g   7  J20  TA 12  X8 PCI Epx  6 SEP  sia     ol x8 PCI Epx  5 10 ICH5R Sos 37 E SS  R  ayn COM2  EGLAN E    WD Enabl  CTLR n x4 PCI Epx  4 na ia pe Il ya  32  82546  ee    scsi    Ist PCI X  3 133 MHz A kable     GLAN e 8  Enable 7902 a  EP fo PXH scsi g  f2 PCI X  2 100 MHz SRL 8  Battery     g PCI X  1 100 MHz ZCR  J22 S2 JA1  SCSI CHA Te   Et  WOR JWOR O BMBUS   satar  PAE Eas A  WoL  ywoL A JpoAUsBzaj saTao s1 jap Ultra 320 SCSI CH 
28. 34 Diskette  IDE Connector Pin Definitions   J3  J4   Pin Number Function Pin Number Function  IDE Connectors 1 Reset IDE 2 GND  3 Host Data 7 4 Host Data 8  5 Host Data 6 6 Host Data 9  There are no jumpers to 7 Host Data 5 8 Host Data 10  9 Host Data 4 10 Host Data 11  configure the onboard IDE 1 11 Host Data 3 12 Host Data 12  13 Host Data 2 14 Host Data 13  and  2 connectors  at J3 15 Host Data1   16 Host Data 14  and J4  respectively   See 17 Host Data 0 18 Host Data 15  19 GND 20 Key  the table on the right for pin 21 DRQ3 22 GND  P 23  O Write  24 GND  definitions  25  O Read    26 GND  27 IOCHRDY 28 BALE  29 DACK3  30 GND  31 IRQ14 32 NC  33 Addr 1 34 GND  35 Addr 0 36 Addr 2  37 Chip Select 0 38 Chip Select 1   39 Activity 40 GND  a O Eee Cana  Sermon nae ee    m TEKA i  psson DIMM 1A  Bank 1  cE  Fomt ie DIMM 2B  Bank 2  rr 5  DIMM 2A  Bank 2   H DIMM 3B  Bank 3   i DIMM 3A  Bank 3   DIMM 4B  Bank 4   23  DIMM 4A  Bank 4   A SUPER    X6DH8 G2 oe  gas pf X8 PCHEpx  6 al   m als  carr     If worse  Sho Ge PT Aje    we 1 2  oe mases   Floppy  am ERR aie      e Oa                       2 27    SUPER    X6DH8 G2 X6DHE G2 User s Manual          Ultra320 SCSI Connectors      X6DH8 G2 Only     Refer to the table below for the pin  definitions of the Ultra320 SCSI  connectors located at JA1 and JA2                                                                                                                                                                                   6
29. 8 pin Ultra320 SCSI Connectors  JA1 and JA2   Connector Connector  Contact Contact  Number Signal Names Number Signal Names  1  DB 12  35  DB 12   2  DB 13  36  DB 13   3  DB 14  37  DB 14   4  DB 15  38  DB 15   5  DB P1  39  DB P1   6  DB 0  40  DB 0   7  DB 1  41  DB 1   8  DB 2  42  DB 2   9  DB 3  43  DB 3   10  DB 4  44  DB 4   11  DB 5  45  DB 5   12  DB 6  46  DB 6   13  DB 7  47  DB 7   14  DB P  48 DB P   15 GROUND 49 GROUND  16 DIFFSENS 50 GROUND  17 TERMPWR 51 TERMPWR  18 TERMPWR 52 TERMPWR  19 RESERVED 53 RESERVED  20 GROUND 54 GROUND  21  ATN 55  ATN  22 GROUND 56 GROUND  23  BSY 57  BSY  24  ACK 58  ACK  25  RST 59  RST  26  MSG 60  MSG  27  SEL 61  SEL  28  C D 62  C D  29  REQ 63  REQ  30  1 O 64  I O  31  DB 8  65  DB 8   32  DB 9  66  DB 9   33  DB 10  67  DB 10   34  DB 11  68  DB 11      SCSI CHA  SCSI CHB      Note  Please refer to Appendix B for software and OS installation  For  Adaptec s SCSI SATA HostRAID  please refer to the CD that came with your    motherboard      2 28       Chapter 3  Troubleshooting          3 1    Chapter 3  Troubleshooting    Troubleshooting Procedures    Use the following procedures to troubleshoot your system  If you have  followed all of the procedures below and still need assistance  refer to the     Technical Support Procedures    and or    Returning Merchandise for Service     section s  in this chapter    Note  Always disconnect the power cord before adding  changing  or installing any hardware components     Before Po
30. B 5                   1  Jumpers not indicated are for test purposes only     2  See Chapter 2 for detailed information on jumpers  I O ports and  JF1 front panel connections   3    a  indicates the location of Pin 1     4  SCSI is for the X6DH8 G2 only    5  SEPC  Supermicro Enhanced Power Connector  specially designed  to support Supermicro 2U Riser Card only              Chapter 1  Introduction          Quick Reference   X6DH8 G2 X6DHE G2       Please refer to Chapter 2 for pin definitions and detailed    information         Jumper Description Default Setting  JBT1 CMOS Clear See Chapter 2   JP12 PWR Fault See Chapter 2   JP13 3rd PW Supply Fail Alarm Enable Off  Disabled    JP14 Alarm Reset Off  Disabled    JPA1 SCSI Controller Enable Pins 1 2  Enabled  Note  JPA2  JPA3 SCSI CHA JPA2  CHB JPA3 Term En Off  Enabled   Note   JPF Force PWR On Off  Normal    JPG1 VGA Enable Pins 1 2  Enabled   JPL1 GLAN Enable Disable Pins 1 2  Enabled   JWD Watch Dog Pins 1 2  Reset   Connector Description    ATX PWR  J1B4   Aux  PWR  J32   CPU PWR J1D1     COM1  J6  COM2  J7   FAN 1 8  DIMM 1A DIMM 4B  GLAN 1 2  JLAN1 2   J3 J4   J5   J20   J22   J23   J24   JA1 JA2   JD1   JF1   JL1   JOH   JP8   JS1 JS2   JWOL   JWOR   USB 0 1   USB 2 3 4    Primary ATX PWR Connector   12V 4 pin Auxiliary System PWR   Required    12 V 8 pin CPU PWR Connector   Required     COM1 COM2 Serial Port Connectors   Fans 1 8  3 pin  Fans 1 4  4 pin  Fans 5 8   Memory DDRII Slots   G bit Ethernet Ports   IDE1 2 Har
31. D  23 PE 24 GND  25 SLCT  Parallel Port    ma Tiana Pr anew  Fores PWR ON sad Lal a EA  nie PWR BE    wh DIMM 1B  Bank 1  Be  0  psBo t DIMM 1A  Bank 1  Pa E  oes DIMM 2B  Bank 2     DIMM 2A  Bank 2  ERA     DIMM 3B  Bank 3  Po S gl  DIMM 3A  Bank 3    ol  DIMM 4B  Bank 4  ange  DIMM 4A  Bank 4  ma  cpu2 i  SUPER    X6DH8 G2  B  Bridge  mw  3 a LICH intru  toe 2  XB PCI Epx  6 aes     of KO PCLE pA fo usr a             ONZ  HGLAN   Mya PCLEpK  4 Obra PA  82546 ee  roxas wane EAEra z  GLAN A  Enable 7202 3  EPL PCIX EZ 100 Mie Pat S 8  FHT wor pasos  Garacl PAS Ses che eee  Riok Qa BATADDS   pq Uira svsesions JL                                   2 26    Chapter 2  Installation                                                                                                                                                                                                                                                                                                                                  Floppy Connector  Floppy Connector Pin Definitions  JP8   The floppy connector is located at Pin Number eine Sh  JP8  See the table below for pin 3 GND 4 Reserved  cath 5 Key 6 FDEDIN  definitions  7 GND 8 Index   9 GND 10 Motor Enable  11 GND 12 Drive Select B   13 GND 14 Drive Select A   15 GND 16 Motor Enable  17 GND 18 DIR   19 GND 20 STEP   21 GND 22 Write Data   23 GND 24 Write Gate   25 GND 26 Track 00   27 GND 28 Write Protect   29 NC 30 Read Data   31 GND 32 Side 1 Select   33 NC 
32. Quick Init option may return some data mis   compares if you later run a consistency check  This is normal and is not a  cause for concern     4  The ACU allows you to use drives of different sizes in a   RAID   However  during a build operation  only the smaller drive can be  selected as the source or first drive    5  When migrating from single volume to RAID 0  migrating from a larger  drive to a smaller drive is allowed  However  the destination drive must be  at least half the capacity of the source drive     6  Adaptec does not recommend that you migrate or build an array on  Windows dynamic disks  volumes   as it will result in data loss     Warning  Do not interrupt the creation of a RAID 0 using the Migrate option   If you do  you will not be able to restart  or to recover the data that was on  the source drive     B 10    Appendix B  Software Installation Instructions          Adding a Bootable Array       To make an array bootable   1  From the Main menu  select Manage Arrays     2  From the List of Arrays  select the array you want to make bootable  and  press Ctrl B     3  Enter Y to create a bootable array when the following message is displayed    This will make all other existing bootable array non bootable  Do you want to  make this array bootable   Yes No    Then  a bootable array will be created   An asterisk will appear next to the bootable array  as shown in the picture    below            Deleting a Bootable Array       To delete a bootable array   1  Fr
33. SUPER       SUPER   X6DH8 G2  SUPER   X6DHE G2    USER   S MANUAL    Revision 1 1b    The information in this User s Manual has been carefully reviewed and is believed to be  accurate  The vendor assumes no responsibility for any inaccuracies that may be  contained in this document  makes no commitment to update or to keep current the  information in this manual  or to notify any person or organization of the updates     Please Note  For the most up to date version of this manual  please see our web site at  www supermicro com     SUPER MICRO COMPUTER reserves the right to make changes to the product described  in this manual at any time and without notice  This product  including software  if any  and  documentation may not  in whole or in part  be copied  photocopied  reproduced  translated  or reduced to any medium or machine without prior written consent     IN NO EVENT WILL SUPER MICRO COMPUTER BE LIABLE FOR DIRECT  INDIRECT   SPECIAL  INCIDENTAL  OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR  INABILITY TO USE THIS PRODUCT OR DOCUMENTATION  EVEN IF ADVISED OF THE  POSSIBILITY OF SUCH DAMAGES  IN PARTICULAR  SUPER MICRO COMPUTER SHALL  NOT HAVE LIABILITY FOR ANY HARDWARE  SOFTWARE  OR DATA STORED OR USED  WITH THE PRODUCT  INCLUDING THE COSTS OF REPAIRING  REPLACING   INTEGRATING  INSTALLING OR RECOVERING SUCH HARDWARE  SOFTWARE  OR  DATA     Any disputes arising between manufacturer and customer shall be governed by the laws of  Santa Clara County in the State of Cali
34. Serial Bus   USBO 1     Universal Serial Bus Pin Definitions                                                                                                                                                                                                                                                                                                                                                                                                          B0 1  Two USB 2 0 ports are located on    beside the PS 2 keyboard mouse Number Definition     1 Vcc  ports  USBO is the bottom connec  2 Data   tor and USB1 is the top connector  7 Datar      4 Ground  See the table on the right for pin  definitions   USB0 1     ia  _ _ 24 Pin ATX PWR  E w ai Fan7 WRN  w HES  LE     DIMM 1B  Bank 1  Epi aL  DIMM 1A  Bank 1      DIMM 2B  Bank 2   gt g  DIMM 2A  Bank 2  oo rs  z DIMM 3B  Bank 3  y Bla   ES DIMM 3A  Bank 3  EDF  DIMM 4B  Bank 4  Rabat  iz DIMM 4A  Bank 4  i n  CPU2 S      3   l  A SUPER    X6DH8 G2 38  GLAN2 E        North ag  Bridge    tee 3 Chassis  fae ol xa PCIEpx  6 O pvi Intrusion  x  gf xe PCr Epx s ca Ichsr   Clr 7 ee  CMOS COMZ  EGLAN PET 4  NJX4 PCLEpx  4 WD Enabl ToS   aah      istry  lt o  pe PCI X  3 133 MHz JRA Enable  amp   GLAN al z  Enable 7902 bad  Eru PCI X  2 100 MHz PXH Eo g  E PCI X  1 100 MHz ZCR i i    WOR  JwoR BUSI TA1 JPAZLas  s  CHA Term  Ena JA1  E wol Q Epen ATAS ist bag Uira  320 SCSICHE 3                                     2 14    Chapter 2  Installa
35. TX Power COnmme ctor         ceccccscceceeeeeeeeeeeeeeeeeeeeeeeeseeeceeeeneeseeseeesneeeneeeee 2 9  Processor Power COnne Ct           cccccccceceeeceeeeeeeeeeeeeeceeeseeseeeneeeeesaees 2 9  NMI BUON css ho ccs eaaa raaa cess a neg atk htaccess  Power LED      FAD DED EEEE cate A A E A E A  NIGI CE Diese nied ea deer eres TAE  Overheat LED  Power Fail VED iriserai anena 2 12  Reset BUOM       cececccsceccsceeeenceceeaeeeeaeeeseeeeseaeeeeaeeseeaeeseaeeseeeeeeaeeeeaeeeaes 2 13    Table of Contents       Power  Butts    c20 p eutectic tall a aeti  Chassis INtrUSiOn           ccccecccesccececeeeeeeeeeeeceeeceeeeeeeceeeeaeeeeeeseeseeeensesneeeneees  Universal Serial Bus  USBO 1  oc  ceeeeeseeeeeeeeteeeeeeeeeeeeeeeetaeeneeneeeees  Extra Universal Serial Bus Headers  USB2 3        S  rial PON Snia i a ae rahe ele nent ba  GLAN  Ethernet Port  oo    cece cess esceeeeeceeeeeeeeeeesaeeeeseeeeseeseeesaesaeeeeeeseees  ATX PS 2 Keyboard and Mouse Ports         ceceeeeeeeseeeeeeeeeeteeneeeeeeees  Fan HOadersieissccsezceecctaiscei vette  a taeeas E naar  Power LED Speaker Header  JD1       cceeeceeeseeeeereeeceeeeeeeeeeeeneeeeeees  Wake OPRINT pa noA oie AELS A Dea Ea A EN  Wake Omn LAN Sonnan inh aa a ives acon vin aie ince     SMB PWR   2 6  JUMPER  Setting Seere dees cheduvacdpsccSeetnareesendesnedatgeerdenteesteaanhesheduessstzeateesses  Explanation of JUMPEPS        eee eee cee eeeeeeeeseeeeeeeeeeseeesaeeseeeseeeeaeeees  GLAN Enable Disable             cccccccescececeseeeeeeeeeeeeeeeae
36. U 2  sL  T K   scsi    792 N   1 PCI X  SLOT PCI X 100MH  112 pxH  X4PCIE A  X    B J  1E  PCI X 133MH2  DDRII 400 i iy   Bape  et won oo  Gbit LAN 1 PCI E DDRII 400               stot CI E B  X8   gt   4DDRII4  ANVIK J15 4 DIMMs  PCIE C  X8   1 PCI E  gor IDE UDMA 100     hus  PRISEC N  SATA SATA ici PCI  32 BIT  tek  0 1 J  USB PORT USB     LPC BUS  0 1 2 3 4 5          LPCS I O  LPCS IO     BMC CON  FWH  KB  FDD  SER 1 HW  PARALL   MS  SER 2 MONITOR PORT  Figure 1 9  Block Diagram of the E7520 Lindenhurst Chipset    Note  This is a general block diagram  Please see the previous Motherboard  Features pages for details on the features of each motherboard     Chapter 1  Introduction          1 2 Chipset Overview    Built upon the functionality and the capability of the E7520 Lindenhurst  chipset  The X6DH8 G2 X6DHE G2 motherboard provides the performance  and feature set required for dual processor based servers  with configura   tion options optimized for communications  presentation  storage  computa   tion or database applications  The Intel E7520 Lindenhurst chipset consists  of the following components  the Lindenhurst Memory Controller Hub  MCH    the 82801ER I O Controller Hub 5 R  ICH5 R   and the Intel PCI X Hub     The E7520 Lindenhurst MCH supports single or dual Nocona processors  with Front Side Bus speeds of up to 800 MHz  Note   Its memory controller  provides direct connection to two channels of registered DDR2  400 with a  marched system bus address and data 
37. _Doctor_lll   You can also  download SDIII User s Guide at  http  Awww supermicro com PRODUCT Manu   als SDIII UserGuide pdf  For Linux  we will still recommend Supero Doctor Il   2  For detailed information on Adaptec s SCSI SATA HostRAID Utility  please  refer to the CDs included in the shipping package     B 23    SUPER    X6DH8 G2 X6DHE G2 User s Manual          Notes    B 24    
38. ache lines for 128 bytes as comprised if Enabled   The options are Disabled and Enabled     Processor Power Management    This feature allows the user to determine the processor power  management mode  The options are Disabled and C States Only  If set to  Disabled  C States and GV1 GV3 are disabled  If set to C States only  the  processor power will be controlled through CPU power states in the APCI  setting     4 13    SUPER   X6DH8 G2 X6DHE G2 User s Manual           gt  1 0 Device Configuration  Access the submenu to make changes to the following settings   Serial Port A    This setting allows you to assign control for serial port A  The options are  Enabled  user defined   Disabled  and Auto  BIOS  or OS  controlled      Base I O Address    This setting allows you to select the base I O address for serial port A   The options are 3F8  2F8  3E8 and 2E8     Interrupt    This setting allows you to select the IRQ  interrupt request  for serial port  A  The options are IRQ3 and IRQ4     Serial Port B    This setting allows you to assign the control for serial port B  The options  are Enabled  user defined   Disabled  Auto  BIOS controlled  and OS  Controlled     Mode    This setting allows you to specify the type of device that will be connected  to serial port B  The options are Normal  and IR  for an infrared device      Base I O Address   This setting allows you to select the base I O address for serial port B   The options are 3F8  2F8  3E8 and 2E8    Interrupt    This se
39. alignment notch at the bottom                         Top View of DDRII Slot  Release Tab LL Ll Release Tab                            To Remove  Use your thumbs to gently push near the edge of  both ends of the module  This should release it from the slot     2 4  l OPorts Control Panel Connectors    The I O ports are color coded in conformance with the PC 99 specification   See Figure 2 3 below for the colors and locations of the various I O ports     Figure 2 3  I O Port Locations and Definitions                                                                            Mouse Parallel Port   Green   Burgandy   la  uspojuss1    WY     Ports W LAN1 LAN2  Port Port     OGE  Keyboard COM1 Port   Purple   Turquoise     2 7    SUPER    X6DH8 G2 X6DHE G2 User s Manual          Front Control Panel    JF1 contains header pins for various buttons and indicators that are nor   mally located on a control panel at the front of the chassis  These connec   tors are designed specifically for use with Supermicro server chassis  See  Figure 2 4 for the descriptions of the various control panel buttons and LED  indicators  Refer to the following section for descriptions and pin defini   tions     Figure 2 4  JF1 Header Pins    Ground NMI  X xX   Power LED Vcc  HDD LED Vcc  NIC1 LED Vcc  NIC2 LED Vcc  Overheat LED Voc  Power Fail LED Vcc    Ground Reset  gt  Reset Button    Ground Pwr Power Button       2 8    Chapter 2  Installation          2 5 Connecting Cables    ATX Power Supply 24 pin C
40. allows you to designate a reserve area in the system  memory to be used as a System BIOS buffer to allow the BIOS to write   cache  data into this reserved memory area  Select Write Protect to  enable this function  and this area will be reserved for BIOS ROM access  only  Select Uncached to disable this function and make this area  available for other devices     Cache Video BIOS Area    This setting allows you to designate a reserve area in the system  memory to be used as a Video BIOS buffer to allow the BIOS to write   cache  data into this reserved memory area  Select Write Protect to  enable the function and this area will be reserved for Video BIOS ROM  access only  Select Uncached to disable this function and make this area  available for other devices     Cache Base 0 512K    If enabled  this feature will allow the data stored in the base memory  area  block 0 512K to be cached  written  into a buffer  a storage area  in the Static DRM  SDROM  or to be written into L1  L2 cache inside  the CPU to speed up CPU operations   Select Uncached to disable this  function  Select Write Through to allow data to be cached into the buffer  and written into the system memory at the same time  Select Write  Protect to prevent data from being written into the base memory area of  Block 0 512K  Select Write Back to allow the CPU to write data back  directly from the buffer without writing data to the System Memory for  fast CPU data processing and operation  The options are Uncached
41. bandwidths of up to 6 4GB s  The  Lindenhurst also supports the new PCI Express high speed serial I O inter   face for superior I O bandwidth  The MCH provides three configurable x8  PCI Express interfaces which may alternatively be configured as two inde   pendent x4 PCI Express interfaces  These interfaces support connection of  the MCH to a variety of other bridges that are compliant with the PCI Ex   press Interface Specification  Rev  1 0a  The MCH interfaces with the  82801ER I O Controller Hub 5 R  ICH5R  via a dedicated Hub Interface sup   porting a peak bandwidth of 266 MB s using a x4 base clock of 66 MHz  The  PXH provide connection between a PCI Express interface and two indepen   dent PCI bus interfaces that can be configured for standard PCI 2 3 proto   col  as well as the enhanced high frequency PCI X protocol  The PXH can  be configured to support for 32  or 64 bit PCI devices running at 33 MHz  66  MHz  100 MHz  and 133 MHz     The ICH5R I O Controller Hub provides legacy support similar to that of  previous ICH family devices  but with extensions in RAID 0 1 support  Serial  ATA Technology  and an integrated ASF Controller  In addition  the ICH5R  also provides various integrated functions  including a two channel Ultra  ATA 100 bus master IDE controller  USB 2 0 host controllers  an integrated  10 100 LAN controller  an LPC firmware hub  FWH  and Super IO interface   a System Management Interface  a power management interface  integrated  IOxAPIC and 8259 i
42. between the different  creating methods for RAID 0 and RAID 1     The following table gives examples of when each is appropriate                             Raid Level   Create Via   When Appropriate  RAID 0 No Init Creating a RAID 0 on new drives  RAID 0 Migrate Creating a RAID 0 from one new drive and    Note  one drive with data you wish to preserve  RAID 1 Build1 Any time you wish to create a RAID 1  but especially if  you have data on one drive that you wish to preserve  RAID 1 Clear Creating a RAID 1 on new drives  or when you want to  ensure that the array contains no data after creation   RAID 1 Quick Fastest way to create a RAID 1   Appropriate when using new drives  RAID 1 Init                     Note  If you select Migrate for RAID 0  or Build for RAID 1  you will be  asked to select the source drive  The contents of the source drive will be  preserved  However  the data on the new drive will be lost      B 9    SUPER    X6DH8 G2 X6DHE G2 User s Manual          5  When you are finished  press Done  as the screen shown below      rray Properties    Array Type   RAID O Stripe     Array Label   Stripe    Array Size   68 938 GB  Stripe Size   64KB    Create RAID via   No Init        Done              Notes     1  Before adding a new drive to an array  back up any data contained on  the new drive  Otherwise  all data will be lost     2  If you stop the Build or Clear process on a RAID 1 from ACU  you can  restart it by pressing Ctrl R     3  A RAID 1 created using the 
43. d  password not required      4 19    SUPER   X6DH8 G2 X6DHE G2 User s Manual          4 6 Boot    You can choose Boot from the Phoenix BIOS Setup Utility main menu with the  arrow keys  You should see the following display  Highlighting a setting with  a   or   will expand or collapse that entry  See details on how to change the  order and specs of boot devices in the Item Specific Help window  All Boot BIOS  settings are described in this section     Main Advanced Security Boot Exit           Removable Devices Item Specific Help    CD ROM Drive  ae eda  lt Tab gt    lt Shift Tab gt   or     lt Enter gt  selects field              Esc e gt  Enter F18     Removable Devices    Highlight and press  lt Enter gt  to expand the field  See details on how to  change the order and specs of devices in the Item Specific Help window     CDROM Drive    See details on how to change the order and specs of the CDROM drive in  the Item Specific Help window      Hard Drive    Highlight and press  lt Enter gt  to expand the field  See details on how to  change the order and specs of hard drives in the Item Specific Help  window     4 20    Chapter 4  BIOS          4 7 Exit    Choose Exit from the Phoenix BIOS Setup Utility main menu with the arrow keys   You should see the following display  All Exit BIOS settings are described in this  section     Main Advanced Security Boot Exit       Item Specific Help    Exit Discarding Changes   Exit System Setup and   Load Setup Defaults save your change
44. d Disk Drive Connectors   VGA Connector   IPMI Connector   System Management Bus Header   Parallel  Printer  Port   Power System Management Header   SCSI Channel A Channel B Connectors  Note   PWR LED pins1 3  SpeakerHeader  pins 4 7   Front Control Panel Connector   Chassis Intrusion Header   Overheat LED   Floppy Disk Drive Connector   Intel SATA 0 1 Connectors   Wake on LAN Header   Wake on Ring Header   Back Panel USB Ports   Front Panel Universal Serial Bus Headers USB2   3 JD2  USB4 J11          Note  for X6DH8 G2 only     1 5    SUPER   X6DH8 G2 X6DHE G2 User s Manual          Motherboard Features    CPU   e Single or dual Intel   604 pin Nocona     w 64 bit extension  processors  at 800 MHz front side  system  bus speed    Memory     Eight 240 pin DIMM sockets supporting up to 16 GB Registered ECC  DDR2 400  PC3200  Memory    Chipset  e Intel E7520 Lindenhurst chipset    Expansion Slots  e X6DH8 G2 X6DHE G2  Three PCI E slots   two slots at x8 4GB sec  one slot x4 2GB sec   Three 64 bit PCI X slots     One PCI X 133 slot  two PCI X 100 slots   BIOS    8 Mb Phoenix   Flash ROM  e DMI 2 1  PCI 2 2  ACPI 1 0  Plug and Play  PnP   SMBIOS 2 3       PC Health Monitoring   e Onboard voltage monitors for CPU cores  chipset voltage  3 3V   5V    12V and 3 3V standby   e Fan status monitor with firmware software on off control       e CPU chassis temperature monitors   e Environmental temperature monitor and control   e CPU slow down on temperature overheat   e CPU thermal trip
45. displayed text is  described in this section  although the screen display is often all you need  to understand how to set the options  see on next page      When you first power on the computer  the Phoenix BIOS    is immediately  activated     While the BIOS is in control  the Setup program can be activated in one of two  ways     1  By pressing  lt Delete gt  immediately after turning the system on  or    2  When the message shown below appears briefly at the bottom of the  screen during the POST  Power On Self Test   press the  lt Delete gt  key to  activate the main Setup menu     Press the  lt Delete gt  key to enter Setup    4 3  Main BIOS Setup    All main Setup options are described in this section  The main BIOS Setup screen  is displayed below     Use the Up Down arrow keys to move among the different settings in each menu   Use the Left Right arrow keys to change the options for each setting     Press the  lt Esc gt  key to exit the CMOS Setup Menu  The next section describes  in detail how to navigate through the menus     Items that use submenus are indicated with the B icon  With the item highlighted   press the  lt Enter gt  key to access the submenu     4 2    Chapter 4  BIOS             Main BIOS Setup Menu    jain Advanced Security Boot Exit                 11 42 57  Item Specific Help  System Date   03 17 20041   lt Tab gt    lt Shift    Tab gt   or  BIOS Date  lt Enter gt  selects field   Legacy Diskette A   1 44 1 25 MB 34  1   Parallel ATA   Both   Seria
46. drives   AOh Set time of day   A2h Check key lock   A4h Initialize typematic rate   A8h Erase F2 prompt   AAh Scan for F2 key stroke   ACh Enter SETUP   AEh Clear Boot flag   BOh Check for errors   Bih Inform RomPilot about the end of POST    B2h POST done   prepare to boot operating system   B4h 1 One short beep before boot   B5h Terminate QuietBoot  optional    B6h Check password  optional    B7h Initialize ACPI BIOS   B9h Prepare Boot   BAh Initialize SMBIOS   BBh Initialize PnP Option ROMs   BCh Clear parity checkers   BDh Display MultiBoot menu   BEh Clear screen  optional    BFh Check virus and backup reminders   COh Try to boot with INT 19   Cih Initialize POST Error Manager  PEM    C2h Initialize error logging   C3h Initialize error display function   C4h Initialize system error handler   C5h PnPnd dual CMOS  optional    C6h Initialize note dock  optional    C7h Initialize note dock late   C8h Force check  optional    C9h Extended checksum  optional    CAh Redirect Int 15h to enable remote keyboard   CBh Redirect Int 13h to Memory Technologies  Devices such as ROM  RAM  PCMCIA  and  serial disk   CCh Redirect Int 10h to enable remote serial video    A4    Appendix A  BIOS POST Codes          POSTCode_ Description    CDh  CEh  D2h    Re map I O and memory for PCMCIA  Initialize digitizer and display message  Unknown interrupt    The following are for boot block in Flash ROM    POSTCode Description    EOh  Eth  E2h  E3h  E4h  E5h  E6h  E7h  E8h  E9h  EAh  EBh  ECh  EDh 
47. duction       MM HOW OU VUCW ETA TEA T E AE A 1 1  GheckliStessnennem ae T E ee 1 1  Contacting SUPErMiCro sirarsa arnai aE EAKR 1 2  SUPER    X6DH8 G2 X6DHE G2  Mage       eeeseceeeeeeeeeeeeeeeeeeeeeeeeeeeeetateeeaees 1 3  SUPER   X6DH8 G2 X6DHE G2 Layout         ceceeeceeeeeeeeeeeeeeeeteeeeeeeaeeeeaees 1 4  Quick    Reference ann eee ee AA ee 1 5  Motherboard  Features  sicisccsiicctecsecssctsstzscctsitevtcasicesicdcsazscibaeecseaseeinsseds 1 6  Intel Lindenhurst Chipset  System Block Diagram          cceeeeeeeeeee 1 8   1 2 Chipset OVErViOW 00    eecececeeseeseeneeeeeeeceeeeeeeeeeeesaeeaesaeeaeeeeeeseaseaeeaeeaeeeeeeeee 1 9   1 3     Special Featuresissiccicnndediadtndaliiiadisa mse heidi ies 1 10  Recovery from AC Power LOSS       ccccesceseseseteeeeeeeeeeeeeeteeaeeneeneeaees 1 10   1 4  PC Health MOnitoring  sseiciecdne sis sastiesaedsntoenieAtinnearaias 1 10   125  ACPIsO atures  iren arn reaR a E a eaaa EE RAA E SEATA 1 11   1 6 Power Supply   i7  Super l Qr rany eusan a a sree tere aaa E eer ry    Chapter 2  Installation  2 1 Static Sensitive  DEVICES ssrnnsrnpinnn anan RI 2 1  Precautions              WADPACKING issiran aaas  2 2 PGA Processor and Heatsink Installation    essssesseseerreereere 2 2  2 3 Installing DIMMS wisiccccscccessccessscssessccscteccssssecescastenczcassdsesensecustecanenssccececcerssersneas   2 6  2 4 I O Ports Control Panel Connectors         cceceeseseeeeeeeeeeseeeeeeeeeeeeteeaeeneeeeeeeees 2 7  2 5 gt  Connecting  Cables  sirisser anand 2 9  A
48. e  7902  ene  b pon    Enable Na  nme Pa SA  Eporxe1 too miezor 5  oF m o s     JPA2ISCSI CHA Term  Ena  an om  atat  pAs scsi CHB Term  Er M  m wo J soquS82F BArAn st ag Uhra a20SCSI CHE O                              Connector 3 21  Pins    i   Jumper  Cap           3 2 1  i L B  Setting  Pin 1 2 short  GLAN  Enable Disable    Jumper Settings             Jumper   Position Definition  Pins 1 2 Enabled  Pins 2 3 Disabled                   I e  parma PWR  E     E   rans dpn Mie Force PWR ON  PWR                               DIMM 1B  Bank 1                 fesson DIMM TA  Bank 1   otic DIMM 2B  Bank 2   DIMM 2A  Bank 2   DIMM 3B  Bank 3   DIMM 3A  Bank 3                       cput                               DIMM 4B  Bank 4   DIMM 4A  Bank 4     SUPER    X6DH8 G2                   cruz                      North  Bridge       TPR cq                Enable 3             XB PCLEpK  6 Pw                            fsupe n Pr  e XePcre ps w a a  P rower   Ce LI                                                                                                                         Ultra 320 SCSICHA          Jat                            2 20    Chapter 2  Installation          CMOS Clear    JBT1 is used to clear CMOS  Instead of pins  this  jumper  consists of  contact pads to prevent the accidental clearing of CMOS  To clear CMOS   use a metal object such as a small screwdriver to touch both pads at the    same time to short the connection     Always remove the AC power cord  fro
49. e E0  pseort DIMM 7A  Bank 1  E  zB  Fomilss DIMM 2B  Bank 2  wut    El  DIMM 2A  Bank 2      z DIMM 3B  Bank 3  a IS  E8 DIMM 3A  Bank 3  PER  DIMM 4B  Bank 4  hargat  423 DIMM 4A  Bank 4  y  i   cpu2  l  SUPER    X6DH8 G2 Ba  aH     GLAN2 5s  North kki  Bridge  PCa a  E nabi 3 g pren ery    J20  RAGE    vf xe PCLEpx  6 eu  x z  Bupe    HENE  9  XB PCLEpx  5 w icusr   cl br s  cmos  n  a    Jat y  LAN mn  ou DIXA PCHEpx  4 WDE gj  BIOS  pa a  82546  i Jpas scsi   i   Pcrx s 133 MHz E Enable H  GLAN 2 8  Enable 7902 2  EPL fp porxaz100 Mhz PH ETA 3  e  z  5  E PcLx i 100 Miz ZR a    JPA2   SCSICHATerm  Ena  JA1  J peus   saTa1 JPASESCSI CHB Term  Ena    Jpq USB273  SaTaopst S Ultra 320SCSICHB  L                2 23    SUPER    X6DH8 G2 X6DHE G2 User s Manual          SCSI Enable Disable            ForX6DH8 only  SCSI Enable Disable  Jumper Settings   JPA1   Jumper JPA1 allows you to enable Jumper    Position Definition  or disable the SCSI headers  Pins 1 2  Enabled  Jumper JPA1 is for headers  1 and Pins 2 3  Disabled                 2  The default setting is pins 1 2  to enable all four headers  See the  table on the right for jumper set   tings     SCSI CH A B Termination    SCSI Channel Termination          Enable Disable   ForX6DH8 Enable Disable  Jumper Settings  only   JPA2  JPA3   Jumper  Position Definition  Jumpers JPA2 and JPA3 allow you Open Enabled  to enable or disable termination for Closed Disabled                the SCSI connectors  Jumper JPA2  controls SCSI
50. e HDD installed at  this connection  The option Auto will allow the BIOS to automatically  configure the parameters of the HDD installed at the connection  Enter a  number from 1 to 39 to select a predetermined HDD type  Select CDROM  if a CDROM drive is installed  Select ATAPI if a removable disk drive is  installed     CHS Format  The following items will be displayed by the BIOS   TYPE  This item displays the type of CPU   Cylinders  This item indicates the status of Cylinders   Headers  This item indicates the number of headers   Sectors  This item displays the number of sectors     Maximum Capacity  This item displays the maximum storage capacity  of the system     LBA Format  The following items will be displayed by the BIOS     Total Sectors  This item displays the number of total sectors available  in the LBA Format     Maximum Capacity  This item displays the maximum capacity in the  LBA Format     Multi Sector Transfer    This item allows the user to specify the number of sectors per block to  be used in multi sector transfer  The options are Disabled  4 Sectors  8  Sectors and 16 Sectors     LBA Mode Control    This item determines whether Phoenix BIOS will access the IDE Channel 0  Master Device via the LBA mode  The options are Enabled and Disabled     32 Bit I O    This option allows the user to enable or disable the function of 32 bit  data transfer  The options are Enabled and Disabled     4 5    SUPER   X6DH8 G2 X6DHE G2 User s Manual          Transfer Mode  
51. e is  required before any warranty service will be rendered  You can obtain  service by calling your vendor for a Returned Merchandise Authorization   RMA  number  When returning to the manufacturer  the RMA number  should be prominently displayed on the outside of the shipping carton  and  mailed prepaid or hand carried  Shipping and handling charges will be ap   plied for all orders that must be mailed when service is complete     This warranty only covers normal consumer use and does not cover dam   ages incurred in shipping or from failure due to the alternation  misuse   abuse or improper maintenance of products     During the warranty period  contact your distributor first for any product  problems     Chapter 4  BIOS          Chapter 4  BIOS    4 1 Introduction    This chapter describes the Phoenix BIOS    Setup utility for the X6DH8 G2   X6DHE G2  The Phoenix ROM BIOS is stored in a flash chip and can be  easily upgraded using a floppy disk based program     Note  Due to periodic changes to the BIOS  some settings may have been  added or deleted and might not yet be recorded in this manual  Please refer  to the Manual Download area of the Supermicro web site   lt http   www supermicro com support bios  gt  for any changes to BIOS that  may not be reflected in this manual     System BIOS    The BIOS is the Basic Input Output System used in all IBM   PC  XT     AT     and PS 2   compatible computers  The Phoenix BIOS flash chip stores the  system parameters  such type o
52. eeeeesaeesaeeseeeteeeeaeeees       3 4 Returning Merchandise for Service    Chapter 4  BIOS    Asl IMiOGuctOn erorri ten deat Wane iid ail SA EEEE ENAS 4 1  4 2   RUNNING SETUP aaie initan hdc ae iandae ii 4 2  4 3 Main BIOS Setup    ec cececeeseeeceeceeeeeeeaeeseceeseeseeeeaeeaeeaesaeseseeseeseaeeaeeaeeaeeeeees 4 2  4 4  Advanced Setupiciitiackinwaisieeai E RE R RN 4 6  4 5 Security SOtup scccnistaeiiininidisn it rn E SE REN ERa S EEEE 4 18  4 6 Boot SOtuPisecsseeenaca tan enieencetie etn iede e ieee 4 20  STS  ERs T N E A aE scantenes ecianesettvaviase A 4 21  Appendices    Appendix A  BIOS POST Codes sisri eeesesesceseeeceeeeeseesetaeeeeceeseceseaeeaeeaeeeeeeseees A 1  Appendix B  Installing Software Drivers and the Operating System                B 1    vi    Chapter 1  Introduction          Chapter 1  Introduction    1 1 Overview    Checklist    Congratulations on purchasing your computer motherboard from an ac   knowledged leader in the industry  Supermicro boards are designed with  the utmost attention to detail to provide you with the highest standards in  quality and performance  Check that the following items have all been in   cluded with your motherboard  If anything listed here is damaged or miss   ing  contact your retailer  All are included in the Retail Box        One  1  Supermicro Mainboard   One  1  ribbon cable for IDE devices   One  1  floppy ribbon cable   One  1  Ultra 320 SCSI cable   X6DH8 G2 only    One  1  COM2 cable   One  1  USB  2 port  cable   O
53. eeeeseseenaeeeaeeeaeenaeenaes  CMOS Cla eenia ea EEr E aeaa a iia  Watch Dog       VGA EMAab le DAE ATTE EE AAA EN ebucgadbeneaushneseeds  Alarm  R S tistcaisiaiestiees tnt cna acca ean A Vaa  PW RoR aU tees te tee a eaten reais  SCSI Enable Disable isina A  SCSI Channel A B Termination           cccceccccceseceeeeeeeeeeeeeeeeeeeeeeeeneeeeeees   2 7  Onboard    ndicators canine ni cian dein dated ii dae ARATA  GLAN LEDS iior an ee E e a ae EEES   2 8 Parallel Port  Floppy Hard Disk Drive and SCSI Connections                 2 26  Parallel Port CONNectOr          ccceccceseeeeeeneeeeeeeeeeeseeeaeeeeeeeaeeneeseaeenaeeeeeeeee 2 26          Floppy COMME CIOL uu    eeeeeeceseeeceeceesecseeaeesecseceeeeaeeaesaeeaeeseeeeeeaeeateaeeaeeaees 2 27  IDE CONNECT S ia ee AR eee cel lero eens 2 27  SGSI  COMNCCtONS ueria eh aged tte oe 2 28    Chapter 3  Troubleshooting       3 1 Troubleshooting Procedures 0 0    eee cece eeeeeeeeteeeeeeeteeeseeseeeteeeeneeee 3 1  Before  Power  On inene wa ae catia ees 3 1  No POWE 3 occ ocesch scence eeet idee sued abhiceacentestiesend dee tun duueshapakesebdier packiensueentcedereene  No  VideO iA  haan ae et aaaana sand Sa a  Memory Errors oe  Losing the System   s Setup Configuration   00 0    cc eeceseseeeeeeeeeeeeeees 3 2  3 2 Technical Support Procedures        cceeeceeseeseeseeeeeeeeereeeceeeeeeeeeeaeeesneeeeeeeeeaees 3 2    SUPER   X6DH8 G2 X6DHE G2 User s Manual          3 3 Frequently Asked Questions   0        ccceccce cette eeeeeeeeeneeeeeecae
54. emperature Threshold    This option allows the user to set a CPU temperature threshold that will  activate the alarm system when the CPU temperature reaches this pre   set temperature threshold  The options are 70  C  75  C  80  C and 85  C     Highlight this and hit  lt Enter gt  to see monitor data for the following items   CPU1 Temperature  This item displays CPU1 Temperature    CPU2 Temperature  This item displays CPU2 Temperature    System Temperature  This item displays the System Temperature     Fan Speed Control Modes    This feature allows the user to decide how the system controls the speeds of  the onboard fans  The CPU temperature and the fan speed are correlative   When the CPU on die temperature increases  the fan speed will also increase   and vice versa  If the option is set to 3 pin fan  the fan speed is controlled by  voltage  If the option is set to 4 pin  the fan speed will be controlled by Pulse  Width Modulation  PWM   Select 3 pin if your chassis came with 3 pin fan  headers  Select 4 pin if your chassis came with 4 pin fan headers  Select  Workstation if your system is used as a Workstation  Select Serve if your  system is used as a Server  Select Disable to disable the fan speed control  function to allow the onboard fans to constantly run at full speed  12V   The  Options are  1  Disable  2  3 pin  Server   3  3 pin  Workstation   4  4 pin   Server  and 5  4 pin  Workstation     Fan 1 FAN8  If the feature of Auto Fan Control is enabled  BIOS will  au
55. est   routine by skipping certain tests after the computer is turned on  The  settings are Enabled and Disabled  If Disabled  the POST routine will run  at normal speed     Quiet Boot    This setting allows you to Enable or Disable the diagnostic screen during  boot up     ACPI Mode    Use the setting to determine if you want to use ACPI  Advanced  Configuration and Power Interface  power management on your system   The options are Yes and No     Power Button Behavior    If set to Instant Off  the system will power off immediately as soon as the  user hits the power button  If set to 4 sec   the system will power off when  the user presses the power button for 4 seconds or longer  The options are  instant off and 4 sec override     Resume On Modem Ring    Select On to    wake up your system    when an incoming call is received  by your modem  The options are On and Off     Power Loss Control    This setting allows you to choose how your system will react when  power returns after an unexpected loss of power  The options are Stay  Off  Power On and Last State     Watch Dog    If enabled  this option will automatically reset the system if the system is  not active for more than 5 minutes  The options are Enabled and  Disabled     Summary Screen    This setting allows you to Enable or Disable the summary screen which  displays the system configuration during bootup     4 7    SUPER   X6DH8 G2 X6DHE G2 User s Manual            Memory Cache  Cache System BIOS Area    This setting 
56. et Configuration Data   If set to Yes  this setting clears the Extended System Configuration Data    ESCD  area  The options are Yes and No    Frequency for Slot 1 Slot 2 SCSI    This option allows the user to change the bus frequency for the devices  installed in the slot indicated  The options are Auto  PCI 33 MHz  PCI 66  MHz  PCI X 66 MHz  and PCI X 100 MHz    Frequency for Slot 3 G LAN    This option allows the user to change the bus frequency of the devices  installed in the slot indicated  The options are Auto  PCI 33 MHz  PCI 66  MHz  PCI X 66 MHz  PCI X 100 MHz  and PCI X 133 MHz   P  PCI Devices  Slot  1   Slot 6  Access the submenu for each of the settings above to make changes to  the following    Option ROM Scan    When enabled  this setting will initialize the device expansion ROM   The options are Enabled and Disabled     Enable Master    This setting allows you to enable the selected device as the PCI bus  master  The options are Enabled and Disabled     Latency Timer    This setting allows you to set the clock rate for Bus Master  A high priority   high throughout device may benefit from a greater Clock rate  The options  are Default  0020h  0040h  0060h  0080h  O00AOh  00COh  and OOEOh  For    Unix  Novelle and other Operating Systems  please select the option  other     4 10    Chapter 4  BIOS          If a drive fails after the installation of a new software   you might want to  change this setting and try again  Different OS requires different Bus Master 
57. f disk drives  video displays  etc  in the  CMOS  The CMOS memory requires very little electrical power  When the  computer is turned off  a backup battery provides power to the BIOS flash  chip  enabling it to retain system parameters  Each time when the computer  is powered on  the computer is configured with the values stored in the  BIOS ROM by the system BIOS  which gains control at boot up     How To Change the Configuration Data    The CMOS information that determines the system parameters may be  changed by entering the BIOS Setup utility  This Setup utility can be ac   cessed by pressing the  lt Delete gt  key at the appropriate time during system  boot  see below     Starting the Setup Utility    Normally  the only visible POST  Power On Self Test  routine is the memory  test  As the memory is being tested  press the  lt Delete gt  key to enter the  main menu of the BIOS Setup utility  From the main menu  you can access  the other setup screens  such as the Security and Power menus  Begin   ning with Section 4 3  detailed descriptions are given for each parameter  setting in the Setup utility     A Warning  Do not shut down or reset the system while updating BIOS  to prevent possible boot failure     4 1    SUPER   X6DH8 G2 X6DHE G2 User s Manual          4 2 Running Setup   Default settings are in bold text unless otherwise noted     The BIOS setup options described in this section are selected by choosing  the appropriate text from the main BIOS Setup screen  All 
58. figurations  press ESC to exit   The following screen will appear     2  Press Yes to exit the Utility     4 Adaptec RAID Configuration Utility  gt          For more information regarding Adaptec RAID Utility  please refer  to Adaptec s User s Guide in the CD included in your shipping pack   age  You can also download a copy of Adaptec User s Guide from  our web site at  www  supermicro com                  B 19    SUPER    X6DH8 G2 X6DHE G2 User s Manual          B 2 Installing the Intel ICH5R Driver by Adaptec and  Installing the OS    a  Insert Supermicro s bootable CD that came with the package into the CD  Drive during the system reboot  and the screen  Super Micro Driver Diskette  Maker  will appear           b  Choose from the list the item   Intel ICH5R Driver by 3rd Party  Adaptec    and press  lt ENTER gt      c  From the next screen displayed  choose the OS driver you want to install  and press  lt Enter gt      d  Insert a formatted diskette into drive A  and press  lt Enter gt  as prompted   e  Exit the program after the process is completed  Then  reboot the system     f  Insert the Microsoft Windows OS Setup CD in the CD Driver  and the  system will start to boot up from CD     g  Press the  lt F6   gt  key when the message  Press F6 if you need to install a  third party SCSI or RAID driver  displays     h  When the Windows OS Setup screen appears  press  S  to specify  additional device s      i  Insert the driver diskette  Adaptec Embedded Serial ATA Raid Con
59. fore  doing so  BIOS will write the error to port 80h  attempt to initialize video and  write the error in the top left corner of the screen    The following is a list of codes that may be written to port 80h     POSTCode Description    02h Verify Real Mode   03h Disable Non Maskable Interrupt  NMI    04h Get CPU type   06h Initialize system hardware   07h Disable shadow and execute code from the ROM   08h Initialize chipset with initial POST values   09h Set IN POST flag   OAh Initialize CPU registers   OBh Enable CPU cache   OCh Initialize caches to initial POST values   OEh Initialize 1 O component   OFh Initialize the local bus IDE   10h Initialize Power Management   11h Load alternate registers with initial POST values  12h Restore CPU control word during warm boot  13h Initialize PCI Bus Mastering devices   14h Initialize keyboard controller   16h 1 2 2 3 BIOS ROM checksum   17h Initialize cache before memory Auto size    A 1    SUPER   X6DH8 G2 X6DHE G2 User s Manual       POSTCode Description    18h 8254 timer initialization   1Ah 8237 DMA controller initialization   1Ch Reset Programmable Interrupt Controller   20h 1 3 1 1 Test DRAM refresh   22h 1 3 1 3 Test 8742 Keyboard Controller   24h Set ES segment register to 4 GB   28h Auto size DRAM   29h Initialize POST Memory Manager   2Ah Clear 512 kB base RAM   2Ch 1 3 4 1 RAM failure on address line xxxx    2Eh 1 3 4 3 RAM failure on data bits xxxx  of low byte of  memory bus   2Fh Enable cache before system BIOS shadow
60. fornia  USA  The State of California  County of  Santa Clara shall be the exclusive venue for the resolution of any such disputes  Super  Micro s total liability for all claims will not exceed the price paid for the hardware product      California Best Management Practices Regulations for Perchlorate Materials  This Perchlo   rate warning applies only to products containing CR  Manganese Dioxide  Lithium coin cells    Perchlorate Material special handling may apply  See WWW dtsc ca gov hazardouswaste   perchlorate      WARNING  Handling of lead solder materials used in this  roduct may ex OSE you to lead  ac aaa wn to the  tate of Califor ia to cause birth defects and other repro     FCC Statement  This equipment has been tested and found to comply with the limits for a  Class A digital device pursuant to Part 15 of the FCC Rules  These limits are designed to  provide reasonable protection against harmful interference when the equipment is operated  in a commercial environment  This equipment generates  uses  and can radiate radio fre   quency energy and  if not installed and used in accordance with the manufacturer   s instruc   tion manual  may cause harmful interference with radio communications  Operation of this  equipment in a residential area is likely to cause harmful interference  in which case you  will be required to correct the interference at your own expense        Revision Number  Rev  1 1b  Release Date  June 5  2007    Unless you request and receive written 
61. l ATA   Enabled   SATA RAID Enable  Disabled   Native Mode Operation   Auto     gt  IDE Channel   Master   gt  IDE Channel Slave   gt  IDE Channel 1 Master   gt  IDE Channel 1 Slave   gt  IDE Channel 2 Master   gt  IDE Channel 3 Master  System Memory   XXXX KB   Extended Memory   XXXX KB   Fi tL  7  F9    Esc aed Enter F10       Main Setup Features       System Time    To set the system date and time  key in the correct information in the  appropriate fields  Then press the  lt Enter gt  key to save the data     System Date    Using the arrow keys  highlight the month  day and year fields and enter  the correct data  Press the  lt Enter gt  key to save the data     BIOS Date    This field displays the date when this version of BIOS was built     Legacy Diskette A    This setting allows the user to set the type of floppy disk drive installed as  diskette A  The options are Disabled  360Kb 5 25 in  1 2MB 5 25 in  720Kb  3 5 in  1 44 1 25MB  3 5 in and 2 88MB 3 5 in     Parallel ATA    This setting allows the user to enable or disable the function of Parallel  ATA  The options are Disabled  Channel 0  Channel 1 and Both     4 3    SUPER   X6DH8 G2 X6DHE G2 User s Manual          Serial ATA    This setting allows the user to enable or disable the function of Serial ATA   The options are Disabled and Enabled     Serial ATA RAID Enable    Select Enabled to enable Serial ATA RAID Functions    For the Windows OS  environment  use the RAID driver if this feature is set to Enabled  If 
62. l re boot     8  During the system startup  press the  lt Ctrl gt  and the  lt A gt  keys simulta   neously to run the Adaptec RAID Configuration Utility when prompted by the  following message     Press  lt Ctrl gt  lt A gt  for Adaptec RAID Configuration Utility     B 3    SUPER    X6DH8 G2 X6DHE G2 User s Manual    The Adaptec Embedded Serial ATA with HostRAID Control   ler Driver             Adaptec s Embedded Serial ATA RAID with HostRAID controller adds RAID  functionality to the Serial ATA I O controller by supporting RAID 0  Striping   or RAID 1  Mirroring  to enhance the industry s pioneer PCl to e host con   troller products  RAID striping  RAID 0  can greatly improve hard disk I O  performance because of its capability in striping data across multiple drives   RAID mirroring  RAID 1  allows the data to be simultaneously written to two  drives  so critical data is always available even if a single hard disk fails   Due to the built in functionality  the X6DH8 G2 X6DHE G2 is specially de   signed to keep pace with the increasing performance demands of com   puter systems by improving disk I O throughput and providing data accessi   bility regardless of a single disk failure  By incorporating the Adaptec Em   bedded Serial ATA into the motherboard design  Supermicro s X6DH8 G2   X6DHE G2 offers the user with the benefits of SATARAID without the high  costs associated with hardware RAID applications      Note  For Adaptec s RAID Driver Installation Instructions  please
63. low for a display of the  Supero Doctor Ill interface      Note 1  The default User Name and Password are ADMIN      Note 2  In the Windows OS environment  the Supero Doctor III settings take  precedence over the BIOS settings  When first installed  the SD III adopts  the temperature threshold settings previously set in the BIOS  Any subse   quent changes to these thresholds must be made within Supero Doctor   since the SDIII settings override the BIOS settings  For the Windows OS to  adopt the BIOS temperature threshold settings  please change the SDIII set   tings to be the same as those set in the BIOS     Supero Doctor Ill Interface Display Screen I  Health Information          Health Information    Intrusion  CPUL Chassis CPU2 Chassis       B 22    Appendix B  Software Installation Instructions          Supero Doctor Ill Interface Display Screen Il  Remote Control         l Fie Edt View Favorites Tools Help Ei    System Info   Health Info  Configuration  Administration  S      Remote Control    Graceful power control       Supero Doctor II allows a user to inform the OS to reboot or shut down within a specified time  the default is 30 seconds    Before the system reboots or shuts down  it s allowed to cancel the action     Requirements    Keep Supero SD3Service Daemon running at all times on this system   Provide TCP IP connectivity     Power control al  Notes  1  SD IIl Software Revision 1 0 can be downloaded from our Web  site at ftp   ftp supermicro com utility Supero
64. lt         o   Veo  oe 310 set ine            J NIC2 LED  lt    O   O   Vee  mo  g armam m z is  parce z  renee  Sing Le U Heja Overheat LED  lt              Vec     exe iener wo Bemas Paes Power Fail LED  lt  o o f  vee  UW p anm o  eatery H Ground             Reset Reset Button  Enable 7902 fd J  a a Pat aL 3      E Ground             pwr  gt  Power Button  a N z J  a   Elia gees cha ermena at   ang O                   2 10    Chapter 2  Installation          HDD LED    The HDD LED connection is located  on pins 13 and 14 of JF1   the hard drive LED cable here to  display disk activity  for any hard  drives on the system  including    SCSI  Serial ATA and IDE      Attach    See    the table on the right for pin defini     tions     NIC1 NIC2 LED Indicators    The NIC  Network Interface Con     troller  LED connections for the  GLAN port1 is located on pins 11                               and 12 of JF1     and for the GLAN    port2 is located on pins 9 and 10    of JF1     to display network activity   to the tables on the right for pin    Attach the NIC LED cables    Refer                                                                                                                                                                                                                                                 FAR  BT ral  rant Bim Lane  Eamon oar  on  OM TE  Bak  amen DIMM 1A  Bank 1      OMe DIMM 2B  Bank 2   Bin 7A Bank 2   3 DIMM 3B  Bank 3   a DIMM 3A  Bank 3   DMAE  Ba
65. ly installed    2  Determine if different speeds of DIMMs have been installed and verify  that the BIOS setup is configured for the fastest speed of RAM used   It is recommended to use the same RAM speed for all DIMMs in the  system    3  Make sure you are using the correct type of Registered ECC DDR2 400   PC3200  SDRAM   recommended by the manufacturer     4  Check for bad DIMM modules or slots by swapping a single module be   tween two slots and noting the results    5  Make sure all memory modules are fully seated in their slots  As an  interleaved memory scheme is used  you must install two modules at a  time  beginning with Bank 1  then Bank 2  and so on  see Section 2 3     6  Check the position of the 115V 230V switch on the power supply        Losing the System   s Setup Configuration    1  Ensure that you are using a high quality power supply  A poor quality  power supply may cause the system to lose the CMOS setup informa   tion  Refer to Section 1 6 for details on recommended power supplies    2  The battery on your motherboard may be old  Check to verify that it still  supplies  3VDC  If it does not  replace it with a new one    3  If the above steps do not fix the Setup Configuration problem  contact  your vendor for repairs     3 2 Technical Support Procedures    Before contacting Technical Support  please take the following steps  Also   note that as a motherboard manufacturer  Super Micro does not sell directly  to end users  so it is best to first check with
66. m the system before clearing CMOS     Note  For an ATX power supply  you must completely shut down the sys        tem  remove the AC power cord and then short JBT1 to clear CMOS     Do       not use the PW _ON connector to clear CMOS        Watch Dog    JWD controls Watch Dog  a system  monitor that takes action when a  software application hangs  Close  Pins 1 2 to reset the system if a  program hangs  Close Pins 2 3 to  generate a non maskable interrupt  for the program that hangs  re   quires software implementation    Watch Dog must also be enabled in  BIOS              3        J dP 2epinarxpwr  m5 gpn line  PWR          Force PWR ON                            DIMM 1B  Bank 1   DIMM 1A  Bank 1                          DIMM 2B  Bank 2   DIMM 2A  Bank 2   DIMM 3B  Bank 3   DIMM 3A  Bank 3   DIMM 4B  Bank 4   DIMM 4A  Bank 4                                               cruz       SUPER    X6DH8 G2                   North  Bridge       TPC ca  Eenabie                           sparcten  percep   10                         ELAN  CTLR  82546    GLAN  Enabl    Ee p pcer onne Pai S                               garce a                               spa1 SCSI  E Enable    E pores 193 Miz       7902       Ultra 320 SCSICHA        s                                        E Forxa 100m zor a  122  52     JPA2SCSI CHA Torm  Ena   anapa  Sarai  passes  che Term Er   WoL  swot sDFUSBZA  SATAOPS  jap Ultra 320SCSICHE                B  rent       2 21    Watch Dog  Jumper Settings  JWD  
67. module until it snaps into place in the  slot  Repeat for all modules  see step 1 above         Memory Support    The X6DH8 G2 X6DHE G2 supports up to 16 GB of Registered ECC DDR2   400  PC3200  memory  All motherboards were designed to support 2 GB  modules in each slot  but has only been verified for up to 1 GB modules     Note  Due to memory allocation to devices installed in the system  the re   maining memory available for operational use may be reduced when 4 GB   or more  of memory is used  The reduction of memory availability is dispro   portional  See the table below for reference        Possible System Memory Allocation  amp  Availability                         System Device Size Physical Memory Available   4 GB Total Memory    Firmware Hub Flash 1MB 3 99GB   Memory  BIOS    Local APIC 4KB 3 99 GB   Area reserved for the 2MB 3 99 GB   chipsets   I O APIC  4 Kbytes  4KB 3 99 GB   PCI Enumeration Area 1 256MB 3 76 GB   PCI Express  256MB  256MB 3 51 GB       PCI Enumeration Area 2 512MB 3 01 GB   if needed  aligned on  256MB boundary             VGA Memory 16MB 2 85 GB  TSEG 1MB 2 84 GB  Memory available to the 2 84 GB             OS  amp  other applications       Chapter 2  Installation          Figure 2 2  Installing and Removing DIMMs       D DIMMII  Notch     gt  J    I ie         Notch    se Note  Notch es  should align  with the  receptive point  on the slot    To Install  Insert module vertically and press down until it snaps  into place  Pay attention to the 
68. n SUPER    X6DH8 G2    er  Pe e i  EE  30 H ICH intr  Ta ea     b  supef        ii  ge   olga gel  jit sp  Moran    Sapciepe as wo Enabi  cmr   3  ase T lwo  Laa as     E romansu apagan Fa  LAN  EPH Perea 100 me Px aa Ed  i  Epevxes toommezor  WOR priate  Graal EARCISCR CHA Tern  Ena  2At    Swot J0AUSBZA  SATAJ aa ure 3208C CHE  cna j        2 9    SUPER    X6DH8 G2 X6DHE G2 User s Manual                NMI Button NMI Button Pin  Definitions  JF1    Pin  The non maskable interrupt button        pel  x i ontro   header is located on pins 19 and 20 Ground                20 of JF1  Refer to the table on  the right for pin definitions     Power LED  PWR_LED Pin Definitions                                                                                                                                                                                                                                                                                                                                              JF1   The Power LED connection is lo  Pin  k Number Definition  cated on pins 15 and 16 of JF1  15 Voc  Refer to the table on the right for 16 Control  pin definitions   PWR LED NMI  ce e E an n  Toue    20 19  DIMM 1B  Bank 1  f  seon DIMM 1A  Bank 1  Ground  lt        NMI  OMT  6 DIMM 2B  Bank 2   gt   DIMA 2A  Bank 2  aii xs Ta x  3 DIMM 3B  Bank 3  y  i DIMM 3A  Bank 3  j  DIMM 4B  Bank 4  oot Power LED  A DIN ana P  ae SUPER     X6DH8 G2 bay a HDD LED  ce A ra  sen ae NIC1 LED  
69. n below         Select drives for initialization     elected Drives    00 WDC WD360GD OOELX1 34 46B 00 WDC WD360GD O0ELX1 34 468  01 WDC WD360GD OOELX1 34 46B                6  Press Enter   7  Read the warning message as shown in the screen     Warning  Initialization will erase all Array information  from the selected drives  Any Array using any of these drives  as members will be affected  Do you want to continue  Yes No  _    8  Make sure that you have selected the correct disk drives to initialize  If  correct  type Y to continue     B 15         X6DH8 G2 X6DHE G2 User s Manual          Rebuilding Arrays   Note 1  Rebuilding applies to Fault Tolerant array  RAID 1  only     If an array Build process  or initialization  is interrupted or critical with one  member missing  you must perform a Rebuild to optimized its functionality   For a critical array Rebuild operation  the optimal drive is the source drive      Note 2  If no spare array exists and a hard disk drive fails  you need to  create a spare before you can rebuild an array     To Rebuild an array        1 From the Main Menu  select Manage Arrays  as shown in the screen  below   From the List of Arrays  select the array you want to Rebuild     2 Press Ctrl R to Rebuild        B 16    Appendix B  Software Installation Instructions          Using the Disk Utilities    The Disk Utilities enable you to format or verify the media of your Serial ATA  hard disks     To access the disk utilities        1  Turn on your com
70. nced Configuration and Power Interface  The ACPI  specification defines a flexible and abstract hardware interface that pro   vides a standard way to integrate power management features throughout  a PC system  including its hardware  operating system and application soft   ware  This enables the system to automatically turn on and off peripherals  such as CD ROMs  network cards  hard disk drives and printers  This also  includes consumer devices connected to the PC such as VCRs  TVs  tele   phones and stereos     In addition to enabling operating system directed power management  ACPI  provides a generic system event mechanism for Plug and Play and an oper   ating system independent interface for configuration control  ACPI lever   ages the Plug and Play BIOS data structures while providing a processor  architecture independent implementation that is compatible with both Win   dows 2000 and Windows NT 5 0     SUPER    X6DH8 G2 X6DHE G2 User s Manual          Slow Blinking LED for Suspend State Indicator    When the CPU goes into a suspend state  the chassis power LED will start  blinking to indicate that the CPU is in suspend mode  When the user presses  any key  the CPU will wake up and the LED will automatically stop blinking  and remain on     Main Switch Override Mechanism    When an ATX power supply is used  the power button can function as a  system suspend button to make the system enter a SoftOff state  The  monitor will be suspended and the hard drive will spin down
71. ndows  operating system  The necessary drivers are all included on the Supermicro  bootable CDs that came packaged with your motherboard    The following  section provides information on Adaptec s SATA RAID Driver based on the    Intel ICH5R Controller  For detailed information on Adaptec s SCSI SATA  HostRAID Utility  please refer to the CDs included in the shipping    package                 B 1 Introduction to the Adaptec Embedded Serial ATA RAID  Controller Driver       Serial ATA  SATA     Serial ATA SATA  is a physical storage interface  It uses a single cable with a  minimum of four wires to create a point to point connection between devices   It is a serial link which supports SATA Transfer rates from 150MBps  Because  the serial cables used in SATA are thinner than the traditional cables used in  Parallel ATA PATA   SATA systems have better airflow and can be installed in  smaller chassis than Parallel ATA  In addition  the cables used in PATA can  only extend to 40cm long  while Serial ATA cables can extend up to one meter   Overall  Serial ATA provides better functionality than Parallel ATA        Introduction to the Intel ICH5R I O Controller Hub    Located in the South Bridge of the Intel E7520  Lindenhurst Chipset  the  ICH5R I O Controller Hub provides the I O subsystem with access to the rest  of the system  It supports 2 channel Ultra ATA 100 Bus Master IDE controller   PATA  and two Serial ATA  SATA  Host Controllers  which support up to two  Serial ATA port
72. ne  1  SATA cable   One  1  I O backpanel shield   One  1  Supermicro CD containing drivers and utilities  One  1  User s BIOS Manual    One  1  Ultra 320 SCSI User s Manual   X6DH8 G2 only     1 1    SUPER   X6DH8 G2 X6DHE G2 User s Manual       Contacting Supermicro    Headquarters    Address     SuperMicro Computer  Inc   980 Rock Ave   San Jose  CA 95131 U S A        Tel   1  408  503 8000   Fax   1  408  503 8008   Email  marketing supermicro com  General Information   support supermicro com  Technical Support    Web Site    www supermicro com   Europe   Address  SuperMicro Computer B V   Het Sterrenbeeld 28  5215 ML     s Hertogenbosch  The Netherlands   Tel   31  0  73 6400390   Fax   31  0  73 6416525   Email  sales supermicro nl   General Information   support supermicro nl  Technical Support   rma supermicro nl  Customer Support    Asia Pacific   Address  SuperMicro  Taiwan  4F  No 232 1 Liancheng Road  Chung Ho 235  Taipei Hsien  Taiwan  R O C    Tel   886  2  8226 3990   Fax   886  2  8226 3991   Web Site    www supermicro com tw   Technical Support    Email  support supermicro com tw   Tel  886 2 8228 1366  ext 132 or 139    Chapter 1  Introduction          Figure 1 1  SUPER    X6DH8 G2 X6DHE G2 Image        Note  The drawings and pictures shown in this manual were based on    the latest PCB Revision available at the time of publishiing of the manual   The motherboard you ve received may or may not look exactly the same  as the graphics shown in the manual     1 
73. nhanced Halt State to lower CPU voltage   frequency to prevent overheat  The options are Enabled and Disabled     Note  please refer to Intels web site for detailed information         4 12    Chapter 4  BIOS          No Execute Mode Memory Protection     Available when supported  by the CPU and the OS      Set to Enabled to enable Execute Disable Bit and allow the processor to  classify areas in memory where an application code can execute and  where it can not  and thus  preventing a worm or a virus from inserting and  creating a flood of codes to overwhelm the processor or damage the  system during an attack       Note  this feature is available when your OS and your CPU support the  function of Execute Disable Bit   The options are Disabled and Enabled    Note  For more information regarding hardware software support for this  function  please refer to Intel s and Microsoft s web sites            Thermal Management 2     Available when supported by the CPU      Set to Enabled to use Thermal Management 2  TM2  which will lower CPU  voltage and frequency when the CPU temperature reaches a pre defined  overheat threshold  Set to Disabled to use Thermal Manager 1  TM1    allowing CPU clocking to be regulated via CPU Internal Clock modulation  when the CPU temperature reaches the overheat threshold     Adjacent Cache Line Prefetch   Available when supported by the  CPU      The CPU fetches the cache line for 64 bytes if this option is set to Disabled     The CPU fetches both c
74. nk 3  ine  DIMM 4B  Bank 4  Reboot  sal Opt Enable  DIMM 4A  Bank 4     s   X6DH8 G2 sie 1  UPER  l     e 3g    all  North a    Bridge  Po  Pen a   nt  k eR a0  RAGE    ef xaPCTEp Ho PM   supe IERE  ef xerctepeas 10 rensa   or ir so g   amp  j8  cmos comz      Br yp  HGLAN  XA PCI Ep  4 wo Enabl  cmr      mos    n l  aa las  ay  lt   E axe maun apat S08     oan    A  Enable 7902 8  Saheb poixea wows at sah 3  E  E perxa 100 mHz ZcR T  ui erm Ena AL  WOR wor wines  CEaaTJEARISCS  CHA Tern  E N  HE  wo spqUSB25  SATAD St Sutra s20SESTORE   szoscsicns                               2 22    Chapter 2  Installation                Power Fault Alarm Reset Jumper  Settings  JP12   Jumper Definition  Connect a cable from your power Position  i T PWR T  supply to JP12 to provide warn  2 PWR 2    i i 3 PWR 3  ings of power supply failure  This j Signal  Alarmi  warning signal is passed through Reset                the PWR_LED pin to indicate of a  power failure on the chassis  See  the table on the right for pin defini   tions     Power Fault                                                                                                                                                                                                                                                                                                                                                             E e A Fant  a Asp  ANB FANS A Pin Force PWRON Bus  Fan Powe  KE PWR    5  Mouse B H  2 DIMM 1B  Bank 1  B
75. nk 4     5  DIMM 4A  Bank 4  io  are SUPER    X6DH8 G2 a  ane PPE  North ze  om   Poon y  enable 30 ga  7  a S  PE PCEpe  6 a  K B  e 8   amlen ell U EEE    o COME  z ats  Tm  y 2   an    E eam ooo apan sesh f   GLAN Ed  hppa 7902 fd  ee E N E 3  i  T wor meo aa es gamen N  E wor Qi na bas aE JE                                                          2 11                               HDD LED Pin  Definitions   JF1   Pin  Number   Definition  13 Vcc  14 HD Active  NIC1 LED Pin NIC2 LED Pin  Definitions Definitions   JF1   JF1   Pin Pin  Number   Definition  Number   Definition  11 Vcc 9 Vcc  12 GND 10 GND  HDD LED    NIC1 NIC2 LED       Ground  lt                 x lt        Power LED  lt     DDLED  lt    o    IC1 LED  lt                   C2 LED  lt        Overheat LED  lt                    Power Fail LED  lt          Ground          Ground   O             19     NMI   i  x       Vcc       Vcc  O   Vec  fe  Vcg  Vcc  O   vcc     Reset Reset Button  fe  Pwr  gt  Power Button    SUPER  X6DH8 G2 X6DHE G2 User s Manual          Overheat LED  OH     Overheat  OH  LED  Pin Definitions          Connect an LED to the OH connec   JF1   tion on pins 7 and 8 of JF1 to pro  Pin _       i Number   Definition  vide advanced warning of chassis 7 Vcc  overheating  Refer to the table on 3 S                the right for pin definitions     Power Fail LED    Overheat  OH  LED  Pin Definitions                                                                                                     
76. nsor monitors the CPU temperature in real time and  will turn on the thermal control fan whenever the CPU temperature exceeds  a user defined threshold  The overheat circuitry runs independently from  the CPU  Once it detects that the CPU temperature is too high  it will auto   matically turn on the thermal fan control to prevent any overheat damage to  the CPU  The onboard chassis thermal circuitry can monitor the overall  system temperature and alert users when the chassis temperature is too  high     1 10    Chapter 1  Introduction          CPU Fan Auto Off in Sleep Mode    The CPU fan activates when the power is turned on  It continues to operate  when the system enters Standby mode  When in sleep mode  the CPU will  not run at full power  thereby generating less heat     CPU Overheat LED and Control    This feature is available when the user enables the CPU overheat warning  function in the BIOS  This allows the user to define an overheat tempera   ture  When this temperature is exceeded  both the overheat fan and the  warning LED are triggered     System Resource Alert    This feature is available when used with Supero Doctor III in the Windows  OS environment or used with Supero Doctor II in Linux  SDIII is used to  notify the user of certain system events  For example  if the system is  running low on virtual memory and there is insufficient hard drive space for  saving the data  you can be alerted of the potential problem     1 5 ACPI Features    ACPI stands for Adva
77. nterrupt controllers     1 9    SUPER   X6DH8 G2 X6DHE G2 User s Manual          1 3 Special Features    Recovery from AC Power Loss    This feature allows the user to set the power state after a power outage   You can choose  Power Off  for the system to remain powered off  in  which case you must hit the power switch to turn it back on  or for it to  automatically return to a power on state when set to  Power On   You can  also select  Last State  for the system to resume its last state before the  power outage  See the Advanced BIOS Setup section in the BIOS to change  this setting  The default setting is Last State     1 4 PC Health Monitoring    This section describes the PC health monitoring features of the X6DH8 G2   X6DHE G2  All have an onboard System Hardware Monitor chip that sup   ports PC health monitoring     Onboard Voltage Monitors for the CPU Cores  Chipset  Voltage   3 3V   5V   12V and  3 3V Standby    An onboard voltage monitor will scan these voltages continuously  Once a  voltage becomes unstable  a warning is given or an error message is sent  to the screen  Users can adjust the voltage thresholds to define the  sensitivity of the voltage monitor     Fan Status Monitor with Firmware Control    The PC health monitor can check the RPM status of the cooling fans  The  onboard CPU and chassis fans are controlled by Thermal Management via  BIOS  under Hardware Monitoring in the Advanced Setting      Environmental Temperature Control    The thermal control se
78. o avoid possible damage to the CPU         4  Finish the installation by fully  tightening all four screws  NO 1 SCREW 0 4 SCREW                                                                                        Q    ER    NO 3 SCREW  NO ZSCREW    2 3    SUPER    X6DH8 G2 X6DHE G2 User s Manual          To Un install the Heatsink        Caution  We do not recommend that the  CPU or the heatsink be removed  How   ever  if you do need to un install the  heatsink  please follow the instructions  below to uninstall the heatsink to prevent  damage done to the CPU or the CPU    socket                         1  Unscrew and remove the heatsink  screws from the motherboard in the  sequence as show in the picture on  the right     2  Hold the heatsink as show in the  picture on the right and gently wriggle  the heatsink to loosen it from the CPU    Do not use excessive force when  wriggling the heatsink       3  Once the CPU is loosened  remove  the heatsink from the CPU socket     4  Clean the surface of the CPU and  the heatsink to get rid of the old  thermal grease  Reapply the proper  amount of thermal grease on the  surface before you re install the CPU  and the heatsink     2 4    NO 1 SCREW NO 4 SCREW       NO 3 SCREW NO 2 SCREW            Wz    i     j   SS   SX  X    Chapter 2  Installation          Figure 2 1  PGA604 Socket  Empty and with Processor Installed    Empty socket    Lever    A    Warning  Make  sure you lift the  lever completely Triangle  when installing the
79. om the Main menu  select Manage Arrays     2  From the List of Arrays  select the bootable array     you want to delete  and  press Ctrl B     a bootable array is the array marked with an asterisk  as  shown in the picture above      3  Enter Y to delete a bootable array when the following message is displayed    The array is already marked bootable  Do you want to make this array as not  bootable   Yes No    Then  the bootable array will be deleted and the asterisk  will disappear       Note  do not use the delete key to delete the bootable array      SUPER    X6DH8 G2 X6DHE G2 User s Manual          Adding Deleting Hotspares         Note  In order to rebuild a RAID  RAID 0 or RAID 1   you would need to add  a new HDD as a hotspare            1  Turn on your computer and press Ctrl A as prompted to access the ARC  Utility     2  From the ARC menu  select Array Configuration Utility  ACU    3  From the ACU menu  select Add Delete Hotspares     4  Use the up and down arrow keys to highlight and select the disk you want  to designate as a hotspare  and press  lt Insert gt   and then  press  lt Enter gt      5  Press yes when the following prompt is displayed    Do you want to create spare    Yes No      The spare you have selected will appear in the Select Drive Menu     B 12    Appendix B  Software Installation Instructions          Initializing Disk Drives    If an installed disk does not appear in the disk selection list for creating a  new array  or if it appears grayed out
80. onboard fan  speed is controlled by Thermal  Management via BIOS  To activate  Fan Speed Control  please refer to   Hardware Monitoring  in the Ad   vanced Setting      Power LED Speaker                   On the JDI header  pins 1 3 are  for a power LED and pins 4 7 are  for the speaker  See the table on  the right for speaker pin defini   tions  Note  The speaker connec   tor pins are for use with an exter   nal speaker  If you wish to use  the onboard speaker  you should  close pins 6 7 with a jumper        Fan6 Fans Fan7    a    DIMM 1B  Bank 1   Bor DIMM 1A  Bank 1   awiji DIMM 2B  Bank 2   DIMM 2A  Bank 2   DIMM 3B  Bank 3   H DIMM 3A  Bank 3   DIMM 4B  Bank 4   DIMM 4A  Bank 4     SUPER    X6DH8 G2                                                 put                                                                               PC Yea  enable       XA PCE  6    North  Bridge                         gforce      0 IcHsR                               ce    chos eon  Eh  woe                       kePorepe  4          GLAN  Ena                 I 0s                             E Porxws tssmHz       spas SCSI  E Enable       7902       e  Save Brena tne    a BFR                         penx amazon             WOR  wot     SCSI CHB Te    p i as  pueus  BATaTI eA Eea Sa om ent  Dza       Ultra 320 SCSICHA    A           2 17          4 pin Fan Header Pin Definitions       Definition          Ground   12V    Tachometer  PWM _ Control          Caution  These fan headers use DC power
81. onnector  Pin Definitions                            Pin Number Definition  Pin Number Definition  ATX Power Connector 13 TV 7  lt 33V  14  12V 2  3 3V  The main power supply connector 15 COM 3 COM  2 E 16 PS_ON  4  5V  on the X6DH8 G2 X6DHE G2 meets ie COM 5 CoN  the SSI  Superset ATX  24 pin 18 COM 6  5V  g  gt  19 COM T COM  specification  You must also con  20 Res NC  a PWR _OK  nect the 4 pin  J32  power con  21  5V 9 5VSB  22 5V 10 12V  nector to your power supply  See 23 EV 11 a  the table on the right for pin defini  24 COM 12  3 3V  tions   12V 4 pin  Connector   J32   Pins    Definition  1 amp 2   Ground  3 amp 4    12V                Processor Power    8 Pin  12v Power Supply  Connector Connector  J1D1        In addition to the Primary ATX Pins Definition  power connector  above   the 12v 1 thru 4   Ground  8 pin Processor connector at J1D1 slid Met   must also be connected to your   power supply                          Aux  PWR Connector           CD ann  a       ATX PWR Connector gpy Connector                                                                                                                                                                                                                                                                                        Fenda  per  Mouse  a DIMM 1B  Bank 1   ponent DIMM 1A  Bank 1   pomas DIMM 2B  Bank 2  on  DIMM 2A  Bank 2   i DIMM 3B  Bank 3   H DIMM 3A  Bank 3   DIMM AB  Bank 4   23  DIMM 4A  Bank 4   P cpu2  a
82. or Definition  nection  See the table at right for Amber Flashing  Active                the functions associated with the  second LED     Overheat LED  JOH1     Overheat LED  Pin Definitions  JOH1           Connect an LED to the JOH header es Definition  to provide warning of chassis   ies  ctive             overheating  See the table on the  right for pin definitions                                                                                                                                                                                                                                                                                                                                         GLAN 1 2  J E   F _ 24 Pin ATXPWR   EPE  Fan7 Pw Sy Spin  ated Ee Force PWR ON MBuS  Fault PWR  KE PWR a TDT   Mouse  EE     2 DIMM 1B  Bank 1  R3     pseont DIMM 1A  Bank 1  Ie  zB  pomije DIMM 2B  Bank 2  i  cput  DIMM 2A  Bank 2     z DIMM 3B  Bank 3  sj     DIMM 3A  Bank 3    p  DIMM 4B  Bank 4  Reboot  we Opt  Enable  DIMM 4A  Bank 4  8h  SUPER    X6DH8 G2 n    e E OH LED  ana gi  North Se  Bridge  6 2  e ell y SEH Intel  z    RAGE     X8 PCI Epx  6 ceed IPM  x k f     jupen 8      X8 PCI Epx  5 vo icHsR   Cr pT aa e    cmos a  ett J  HGLAN  cue DIXA PCI Epx  4 Wo Enable Fog  a s  82546  E spat scsi     E PCI X  3 133 MHz E Enable    GLAN 8  Enable 7902 3  EPL Bpcnxae woo iz PH aL Fy  e  2     Perxa soo mizZ0R  322 S2     jpa  SCSICHA Term Ena  JA1                                     
83. or Disable event logging     ECC Event Logging    This setting allows you to Enable or Disable ECC event logging     Mark DMI Events as Read    Highlight this item and press  lt Enter gt  to mark the DMI events as read     Clear All DMI Event Logs    Select Yes and press  lt Enter gt  to clear all DMI event logs  The options are  Yes and No     4 15    SUPER   X6DH8 G2 X6DHE G2 User s Manual           gt  Console Redirection  Access the submenu to make changes to the following settings   COM Port Address    This item allows you to specify which COM port to redirect the console  redirection to  Onboard COM A or Onboard COM B  This setting can also  be Disabled     BAUD Rate    This item allows you to select the BAUD rate for console redirection  The  options are 300  1200  2400  9600  19 2K  38 4K  57 6K and 115 2K     Console Type    This item allows you to select the console type for console redirection   The options are VT100  VT100 8bit  PC ANSI  7bit  PC ANSI  VT100   VT   UTF8     Flow Control    This item allows you to select the flow control for console redirection   The options are  None  XON XOFF  and CTS RTS     Console Connection    This item allows you to decide how the console redirection is to be  connected  either Direct or Via Modem     Continue CR after POST    This item allows you to decide whether to continue with console  redirection after the POST routine  The options are On and Off     4 16    Chapter 4  BIOS           gt  Hardware Monitor Logic    CPU T
84. permission from SUPER MICRO COMPUTER  you  may not copy any part of this document     Information in this document is subject to change without notice  Other products and  companies referred to herein are trademarks or registered trademarks of their respective  companies or mark holders     Copyright    2007 by SUPER MICRO COMPUTER INC   All rights reserved   Printed in the United States of America    Preface          Preface  About This Manual    This manual is written for system integrators  PC technicians and  knowledgeable PC users  It provides information for the installation and use  of the SUPER   X6DH8 G2 X6DHE G2 motherboard  The SUPER   X6DH8 G2   X6DHE G2 supports single or dual Intel   Nocona    processors at a 800  MHz front side bus  Based upon Intel s NetBurst microarchitecture  the  Nocona processor supports the IA 32 software and includes features  found in the Xeon    processor such as Hyper Pipelined Technology  which  includes a multi stage pipeline  allowing the processor to operate at much  higher core frequencies  Packaged in a 604 pin Flip Chip Micro Pin Grid  Array FC mPGA4  platform in a Zero Insertion Force ZIF  socket  mPGA  604   the Nocona Processor  which supports Hyper Threading Technology  and Intel EM64T  is ideal for high performance workstation and server  environments with up to two processors on one system bus  Please refer  to the motherboard specifications pages on our web site  http     www supermicro com Product_page product m htm  fo
85. poc Mouse Port  Pin Definitions   J9   The ATX PS 2 keyboard and PS 2 Pin  Number  Definition  mouse are located at J9  See the 1 Data  r i E 2 NC  table at right for pin definitions  3  around   See Figure 2 3 for the locations 4 ae  5 lock  of each   6 NC  KB Mouse  GLAN1  GLAN2  Yq   24 Pin ATX PWR   BPE  Fan7     PWRe PW      amp  pin  Fan6 FanS5   4 Pin Force PWR ON MBus  Fault  R   Ke   PWR J1D1  Mouse e E    DIMM 1B  Bank 1  BE ee  SBOT DIMM 1A  Bank 1  E  fpomi je DIMM 2B  Bank 2  SRI  1  DIMM 2A  Bank 2  oe E  z DIMM 3B  Bank 3  of  F DIMM 3A  Bank 3  are  DIMM 4B  Bank 4  pe Erbia  DIMM 4A  Bank 4  x  cpu2 g   SUPER    X6DH8 G2 E  3  North       Bridge  E Enable   DCH Intruj  z E  RAGE  wl X8 PCI Epx  6 nae Pm  x gl ala   Supet       l e      X8 PCI Epx  5 10 IcH5R   Clr  37 so ejeje  CMOS COM2  o  Hoan JBT1 JWD  CTLR  X4 PCI Epx  4 wD Enei mios  ies 33  82546  tee    3 PCI X  3 133 MHz RA Enable 3  GLAN ad g  Enable 7902 ao  BHP E PCI X  2 100 MHz PXH a 8  5 PCI X  1 100 MHz ZCR  HA woR E cS cue ror ene oo  WOL  JwoL Q JDAUSB2 3   SATAOpSt ia Ultra 320 SCSI CH B 5  peaker a                         2 16    Chapter 2  Installation          Fan Headers    The X6DH8 G2 X6DHE G2 has  eight fan headers  Fan1 to Fan8    Fan1 Fan4 are 3 pin fans  and  Fan5 Fan8 are 4 pin fans     Note   Fan5 Fan8 are 4 pin fan headers   however  Pins 1 3 of these fan  headers are backward compatible  with the traditional 3 pin fans    See the table on the right for pin  definitions    The 
86. power on off the system                                                                                                                                                                                                                                            Pantene Be iter  TEE Ron  Jas re  Ton       DIMM 1B  Bank 1   soar DIMW TA  Bank 1   Ome DIMM 2B  Bank 2   DIM ZA  Bank 2   i DIMM 3B  Bank 3   fg DIMM 3A  Bank 3   DIMM 4B  Bank 4   E DIMM 4A  Ban   pt aA  aan SUPER     X6DH8 G2  ane  north  a Side  te    32  po aaraa Hels  args cal rome lia E p i z  F   AN   parea araa E  ass  w E  E r ooo i  torn z  oran H  oian Teor 3  Eeu E rcxewoume   Pat SRL H  A  Fone ie me zoR  aie Q Siren                                           2 13       Reset Pin  Definitions     JF    1        Pin    Number  Definition       3  4          Reset  Ground          Power Button  Connector  Pin Definitions   JF1        Pin  Number    Definition       1  2       PW_ON  Ground             Reset Button  PWR Button       Ground  lt                   xd            Power LED  lt     HDD LED  lt              NIC1 LED  lt    o          NIC2 LED  lt    o       a  Overheat LED  lt           Z  Power Fail LED  lt                   Ground        Ground                       Pwr  gt  Power Butto             SUPER  X6DH8 G2 X6DHE G2 User s Manual          Chassis Intrusion    A Chassis Intrusion header is lo   cated at JL1  Attach the appropri   ate cable to inform you of a chas   sis intrusion     Universal 
87. puter and press Ctrl A when prompted to access the  ARC utility  as shown in the screen below      4 Adaptec RAID Configuration Utility  gt     Adaptec En    Array Configuration Utility  Disk Utilities                   B 17    SUPER    X6DH8 G2 X6DHE G2 User s Manual          2  From the ARC menu  select Disk Utilities as shown in the screen below     4 Adaptec RAID Configuration Utility  gt     istRAID Control le    Options    Array Configuration Utility  Disk Utilities          3 Select the desired disk and press Enter  as shown in the screen below      k and pr    SATA Port  0 WDC WD360GD OOELX1 32 06632  SATA Port  1 WDC WD360GD OOELX1 32 06632  SATA Port  2 No device  SATA Port  3 No device  SATA Port  4 No device  SATA Port  5 No device  SATA Port  6 No device  SATA Port  7  No device          Only drives present at POST are displayed             lt Enter gt  to select    B 18    Appendix B  Software Installation Instructions          You can choose from the following options        1  Format Disk   Simulates a low level format of the hard drive by writing  zeros to the entire disk  Serial ATA drives are low level formatted at the  factory and do not need to be low level formatted again       Caution  Formatting destroys all data on the drive  Be sure to back up  your data before performing this operation      2  Verify Disk Media   Scans the media of a disk drive for defects     To Exit Adaptec RAID Configuration Utility       1  Once you have completed RAID array con
88. r updates on sup   ported processors  This product is intended to be professionally installed     Manual Organization    Chapter 1 begins with a checklist of what should be included in your  mainboard box  describes the features  specifications and performance of  the motherboard and provides detailed information about the chipset     Chapter 2 begins with instructions on handling static sensitive devices   Read this chapter when you want to install the processor and DIMM memory  modules and when mounting the mainboard in the chassis  Also refer to  this chapter to connect the floppy and hard disk drives  SCSI drives  the IDE  interfaces  the parallel and serial ports  the keyboard and mouse  the power  supply and various control panel buttons and indicators     If you encounter any problems  see Chapter 3  which describes trouble   shooting procedures for the video  the memory and the setup configuration  stored in CMOS  For quick reference  a general FAQ  Frequently Asked  Questions  section is provided     Chapter 4 includes an introduction to BIOS and provides detailed informa   tion on running the CMOS Setup utility     Appendix A provides BIOS POST codes     Appendix B provides software and the OS installation instructions     SUPER    X6DH8 G2 X6DHE G2 User s Manual  Table of Contents          Preface  ADOUE Minis  Manuales sereia Seca Seas aaraa aaam eea saa niea anaa End aaa a aa a AEAEE Raia iii  Manual Organization saii eiiieaen aaria ta eda iii    Chapter 1  Intro
89. s Windows XP  Windows 2000  and Windows 2003  you can set SATA  and PATA to the Enhanced Mode    The newer Operating Systems can ac   commodate both Enhanced Mode and Combined Mode and support up to 6 ATA  devices                 Please refer to the  Advanced Chipset Control  under the  Advanced  Setup  in the BIOS for the selection of Combined Mode or Enhanced Mode       Appendix B  Software Installation Instructions          Configuring BIOS settings for the SATA RAID Functions  En   hanced Mode     1  Press the  lt Del gt  key during system bootup to enter the BIOS Setup Utility       Note  If it is the first time to power on the system  we recommend that you  load the Optimized Default Settings  If you have already done so  please  skip to Step 3     2  Use the arrow keys to select the  Exit  Menu  Once in the  Exit  Menu   scroll down the menu to select the item   Load Setup Default  and press the   lt Enter gt  key  Select  Yes  to confirm the selection  Press the  lt Enter gt  key to  load the default settings to the BIOS     3  Use the arrow keys to select the  Main  Menu in the BIOS     4  Scroll down to  SATA RAID Enable  and press the  lt Enter gt  Key to select  this option     5  From this submenu  select  Enable  and press  lt Enter gt      6  Tap the  lt Esc gt  key and scroll down to  Exit   Select  Save and Exit  from  the  Exit  menu  Press the  lt Enter gt  key to save the changes and exit the  BIOS     7  Once you ve exited the BIOS Utility  the system wil
90. s and up to two RAID drives  The ICH5R I O Controller Hub  supports the following Parallel ATA  PATA  and Serial  SATA  device configu   rations        B 1    SUPER    X6DH8 G2 X6DHE G2 User s Manual          ATA Operate Mode    You can select from the following two modes  Combined Mode and Enhanced  Mode     Combined Mode        In this mode  system BIOS assigns the traditional IRQ 14 and IRQ 15 for the  use of HDD  Up to 4 ATA devices are supported by this mode     Within the Combined Mode  the following three modes are supported      Non Combined Mode  Parallel ATA only with the maximum of 4 devices sup   ported      Non Combined Mode  Serial ATA only with the maximum of 2 devices sup   ported        Combined Mode  SATA devices and PATA  with the support of 2 devices  each  total  4 devices maximum    For IDE SATA configurations  please refer to  the table below         Primary Master  PM  Yes   Yes   No No No No  Primary Slave  PS  Yes  No   Yes  No  No_   No  Secondary Master  SM    Yes   No   No Yes   No   No  Secondary Slave  SS  Yes  No  No_   No Yes   No  SATA Port0 No  SM ISM  PM   PM   PM  SATA Portl No   SS SS PS PS PS   Note   No Not Present  Yes Present  Also  if Logical Primary is  selected  the IDE channels are no longer available                                                  Enhanced Mode        In this mode  system BIOS will automatically search for all available IRQs for the  use of HDD  For newer Operating Systems that support the Enhanced Mode   such_a
91. s the screen shown on the next page      B 7    SUPER    X6DH8 G2 X6DHE G2 User s Manual       61 WDC WD3606D 00ELX1 34 468    Select drives to create frray Selected DTIU S ms    00 WDC WD360GD O0ELX1 34 4GB 00 WDC WD360GD OOELX1 34 46B       Assigning Array Properties    Once you ve create a new array  you are ready to assign the properties to  the array      Caution  Once the array is created and its properties are assigned    you cannot change the array properties using the ACU  You will need to  use the Adaptec Storage Manager   Browser Edition   Refer to Adaptec s  User s Guide in the enclosed CD      To assign properties to the new array        1  In the Array Properties menu  as shown in the following screen   select  an array type and press Enter     Note that only the available array types  RAID 0  and RAID1  are displayed  on the screen    RAID 0 or RAID 1 requires two drives      B 8    Appendix B  Software Installation Instructions             firray Properties    Array Type     RAID O Stripe   RAID 1 Mirror   Array Label    Array Size   68 938 GB    Stripe Size   64KB    Create RAID via     Done                 2  Under the item  Arrays Label   type in an label and press Enter     Note  The label shall not be more than 15 characters      3  For RAID 0  select the desired stripe size    Note  Available stripe sizes  are 16  32  and 64 KB default  It is recommended that you do not change  the default setting      4  The item   Create RAID via  allows you to select 
92. s to  A CMOS     Discard Changes   Save Changes                Fi tL ES F9  Esc e   Enter F18    Exit Saving Changes   Highlight this item and hit  lt Enter gt  to save any changes you made and to  exit the BIOS Setup utility    Exit Discarding Changes   Highlight this item and hit  lt Enter gt  to exit the BIOS Setup utility without saving  any changes you may have made    Load Setup Defaults   Highlight this item and hit  lt Enter gt  to load the default settings for all items in  the BIOS Setup  These are the safest settings to use    Discard Changes    Highlight this item and hit  lt Enter gt  to discard  cancel  any changes you  made  You will remain in the Setup utility     4 21    SUPER   X6DH8 G2 X6DHE G2 User s Manual          Save Changes    Highlight this item and hit  lt Enter gt  to save any changes you made  You will  remain in the Setup utility     4 22    Appendix A  BIOS POST Codes          Appendix A  BIOS POST Codes    This section lists the POST  Power On Self Test  codes for the PhoenixBIOS  POST  codes are divided into two categories  recoverable and terminal     Recoverable POST Errors  When a recoverable type of error occurs during POST  the BIOS will display    an POST code that describes the problem  BIOS may also issue one of the  following beep codes     1 long and two short beeps   video configuration error  1 continuous long beep   no memory detected    Terminal POST Errors    If a terminal type of error occurs  BIOS will shut down the system  Be
93. scharge    e Touch a grounded metal object before removing the board from the anti   static bag    e Handle the board by its edges only  do not touch its components  periph   eral chips  memory modules or gold contacts    e When handling chips or modules  avoid touching their pins    e Put the motherboard and peripherals back into their antistatic bags when  not in use    e For grounding purposes  make sure your computer chassis provides ex   cellent conductivity between the power supply  the case  the mounting  fasteners and the motherboard    e Use only the correct type of onboard CMOS battery  Do not install the  onboard upside down battery to avoid possible explosion     Unpacking    The motherboard is shipped in antistatic packaging to avoid static damage   When unpacking the board  make sure the person handling it is static protected     2 1    SUPER    X6DH8 G2 X6DHE G2 User s Manual          2 2 Nocona Processor and Heatsink Installation    When handling the processor package  avoid placing direct  pressure on the label area of the fan  Also  do not place the  AN motherboard on a conductive surface  which can damage the   BIOS battery and prevent the system from booting up   IMPORTANT  Always connect the power cord last and always remove it  before adding  removing or changing any hardware components  Make  sure that you install the processor into the CPU socket before you install  the CPU  CEK  heat sink  To adequately support the weight of CPU heat  sinks  please in
94. set to  Disabled  use the Non RAID driver      Native Mode Operation    Select the native mode for ATA  The options are  Parallel ATA  Serial ATA   Both  and Auto     PIDE Channel 0 Master Slave  IDE Channel 1 Master Slave  IDE  Channel 2 Master  IDE Channel 3 Master    These settings allow the user to set the parameters of IDE Channel 0  Master Slave  IDE Channel 1 Master Slave  IDE Channel 2 Master  IDE  Channel 3 Master slots  Hit  lt Enter gt  to activate the following sub menu  screen for detailed options of these items  Set the correct configurations  accordingly  The items included in the sub menu are     Main    Item Specific Help    CHS Format   Cylinders  User   you ppan EA  i   parameters of hard dis   curions drive installed at this   Heads  c il connection    Heads  Auto   autotypes   Sectors  hard disk drive   Sectors  installed here     1 39   you select  pre determined type of  hard disk drive  installed here   LBA Format CD ROM   a CD ROM drive  Total Sectors  p an talled here    i Stu  femovable    eee Et  eye removable disk drive is    Maximum Capacity   Maximum Capacity     installed here           Multi Sector Transfers   Disabled    LBA Mode Control   Disabled    32 Bit 1   0   Disabled    Transfer Mode   Standard    Ultra DMA Mode   Disabled   Fi tL       F9  Esc e gt  Enter F10          4 4    Chapter 4  BIOS          Type    The feature allows you to select the type of IDE hard drive  The option   User will allow the user to enter the parameters of th
95. stall the X6DH8 G2 X6DHE G2 in a chassis that is compliant  with the SSI EEB 3 5 Specification                       CPU Installation    1  Lift the lever on the CPU socket   lift the lever completely as shown  on the picture on the right   otherwise  you will damage the  CPU socket when power is  applied   Install CPU1 first                     2  Insert the CPU in the socket   making sure that pin 1 of the CPU  aligns with pin 1 of the socket   both corners are marked with a  triangle   When using only one  CPU  install it into CPU socket  1   socket  2 is automatically disabled  if only one CPU is used               3  Press the lever down until  you hear the  click  so you  can be sure that the CPU is  securely installed in the CPU  socket        Socket lever in the  locking Position    2 2    Chapter 2  Installation          CEK Heatsink Installation       IMPORTANT  Due to the weight of the CEK  Passive Heatsink  which weights about 1KG    you need to have Heatsink Mounting plate in   stalled on the chassis to prevent damage to  the CPU and the motherboard                    1  Do not apply any thermal compound CEK Passive  to the heatsink or the CPU die the Heatsink  required amount has already been   applied     2  Place the heatsink on top of the  CPU so that the four mounting holes  are aligned with those on the retention  mechanism        Screw 2    3  Screw in two diagonal screws  ie  the  1 and the  2 screws  until just   snug   do not fully tighten the screws  t
96. tion          Front Panel Universal  Serial Bus Headers    Extra USB headers  FPUSB2   FPUSB3 FPUSB4  can be used for  front side USB access  You will  need a USB cable to use either  connection  Refer to the tables on  the right for pin definitions     Serial Ports    The COM1  J6  and COM2  J7  se   rial ports are located under the  parallel port  COM1  annd next to  IPMI  COM2   See the table on the  right for pin definitions     Front Panel Universal Serial Bus Pin                            Definitions  FPUSB2 FPUSB3  Pin Pin  Number Definition  Number Definition  1 Veco  2 Vcc  3 Data   4 Data   5 Data   6 Data   Fi Ground  8 Ground  9 Key  10 NA  Universal Serial Bus Pin Definitions  FP USB4  Pin  Number Definition  1 Vcc  2 Data   3 Data   4 Ground  5 NA             Serial Port Pin Definitions                                                    FF    _ _24 Pin ATXPWR   BPF   ane Fan 4 Pin b B4 Force PWR ON    PWR          DIMM 1B  Bank 1           Fan7                 DIMM 1A  Bank 1              DIMM 2B  Bank 2              DIMM 2A  Bank 2   DIMM 3B  Bank 3   DIMM 3A  Bank 3                       cPut     COM1   Pin Number_ Definition   Pin Number Definition  1 DCD 6 DSR  2 RXD 7 RTS  3 TXD 8 CTS  4 DTR 9 RI  5 GND  Serial Port Pin Definitions   COM2   Pin Number _Definition   Pin Number _Definition  1 DCD 6 DSR  2 RXD 7 RTS  3 TXD 8 CTS  4 DTR 9 RI  5 GND 10 NC  laa  afl          DIMM 4B  Bank 4   DIMM 4A  Bank 4                                                       
97. tomatically display the status of the fans indicated in this item     Vcore A Vcore B  These items display the Voltage status of CPU A and  CPUB     P3V3  This item displays the  3 3V voltage status    P5V  This item displays the  5V voltage status    N12V  This item displays the  12V voltage status    P12V  This item displays the  12V voltage status    VDD  This item displays the VDD status    P5Vsb  This item displays the voltage status of  5V Standby power   P3P3Vsb  This item displays the voltage status of  3 3V Standby power     Note  In the Windows OS environment  the Supero Doctor Ill settings take  precedence over the BIOS settings  When first installed  the SD III adopts  the temperature threshold settings previously set in the BIOS  Any subse   quent changes to these thresholds must be made within Supero Doctor   since the SDIII settings override the BIOS settings  For the Windows OS to  adopt the BIOS temperature threshold settings  please change the SDIII set     tings to be the same as those set in the BIOS     4 17    SUPER   X6DH8 G2 X6DHE G2 User s Manual          4 5 Security    You can configure Security Settings from the Phoenix BIOS Setup Utility main  menu with the arrow keys  You should see the following display  Security  setting options are displayed by highlighting the setting using the arrow keys and  pressing  lt Enter gt   All Security BIOS settings are described in this section        Main Advanced Security Boot Exit       Item Specific Help      
98. troller  Driver  into Drive A  and press the  lt Enter gt  key     j  Choose Adaptec Embedded Host Serial ATA Raid Controller from the list  indicated in the Windows OS Setup Screen  and press the  lt Enter gt  key     k  Press the  lt Enter gt  key to continue the installation process   If you need to  specify any additional devices to be installed  do it at this time   Once all  devices are specified  press the  lt Enter gt  key to continue with the installa   tion        From the Windows OS Setup screen  press the  lt Enter gt  key  The OS  Setup will automatically load all device files  and  then  continue the Win   dows OS installation     m  After the Windows OS Installation is completed  the system will auto   matically reboot     B 20    Appendix B  Software Installation Instructions          B 3 Installing Other Software Programs and Drivers       A  Installing Drivers other than the Adaptec Embedded  Serial ATA RAID Controller Driver    After you ve installed the Windows Operating System  a screen as shown  below will appear  You are ready to install software programs and drivers  that have not yet been installed  To install these software programs and  drivers  click the icons to the right of these items     S SUPERMICRO X6DH8 G2 server board Drivers  amp  Tools  WinXP  p x        Intel Lindenhurst chipset INF files       SUPERMICR       Drivers  amp  Tools    Microsoft Direc 9 0    Intel E7520 ATI Graphics driver    Chipset    X6DHB series Adaptec Storage Manager 
99. tting allows you to select the IRQ  interrupt request  for serial port  B  The options are IRQ3 and IRQ4     Parallel Port    This setting allows you to assign the control for the parallel port  The  options are Enabled  user defined   Disabled and Auto  BIOS or OS   controlled      Base I O Address    This setting allows you to select the base I O address for the parallel port   The options are 378  278 and 3BC     Interrupt    This setting allows you to select the IRQ  interrupt request  for the parallel  port  The options are IRQ5 and IRQ7     4 14    Chapter 4  BIOS          DMA Channel    This item allows you to specify the DMA channel for the parallel port   The options are DMA1 and DMAS3     Floppy Disk Controller    This setting allows you to assign control for the floppy disk controller  The  options are Enabled  user defined   Disabled  and Auto  BIOS and OS  controlled      Base I O Address    This setting allows you to select the base I O address for the parallel  port  The options are Primary and Secondary      gt  DMI Event Logging    Access the submenu to make changes to the following settings     Event Log Validity    This is a display to inform you of the event log validity  It is not a setting     Event Log Capacity    This is a display to inform you of the event log capacity  It is not a setting     View DMI Event Log    Highlight this item and press  lt Enter gt  to view the contents of the event  log     Event Logging    This setting allows you to Enable 
100. uired for interfacing with floppy disk  drives  The Super I O supports 360 K  720 K  1 2 M  1 44 M or 2 88 M disk  drives and data transfer rates of 250 Kb s  500 Kb s or 1 Mb s It also  provides two high speed  16550 compatible serial communication ports   UARTs   Each UART includes a 16 byte send receive FIFO  a program   mable baud rate generator  complete modem control capability and a pro   cessor interrupt system  Both UARTs provide legacy speed with baud rate  of up to 115 2 Kbps as well as an advanced speed with baud rates of 250  K  500 K  or 1 Mb s  which support higher speed modems     SUPER   X6DH8 G2 X6DHE G2 User s Manual          The Super I O supports one PC compatible printer port  SPP   Bi directional  Printer Port  BPP   Enhanced Parallel Port  EPP  or Extended Capabilities Port   ECP      The Super I O provides functions that comply with ACPI  Advanced Con   figuration and Power Interface   which includes support of legacy and ACPI  power management through an SMI or SCI function pin  It also features  auto power management to reduce power consumption     Chapter 2  Installation          Chapter 2  Installation    2 1 Static Sensitive Devices    Electric Static Discharge  ESD  can damage electronic components  To pre   vent damage to your system board  it is important to handle it very carefully   The following measures are generally sufficient to protect your equipment  from ESD     Precautions    e Use a grounded wrist strap designed to prevent static di
101. up   port registered ECC DDR2 400  PC3200  SDRAM modules  It is strongly  recommended that you do not mix memory modules of different speeds and  sizes     Question  How do I update my BIOS     Answer  It is recommended that you do not upgrade your BIOS if you are  experiencing no problems with your system  Updated BIOS files are located  on our web site at http   www supermicro com support bios   Please check  our BIOS warning message and the info on how to update your BIOS on our  web site  Also  check the current BIOS revision and make sure it is newer  than your BIOS before downloading  Select your motherboard model and       3 3    SUPER    X6DH8 G2 X6DHE G2 User s Manual          download the BIOS file to your computer  Unzip the BIOS update file and  you will find the readme txt  flash instructions   the phlash exe  BIOS flash  utility   the platform bin  platform file  and the BIOS image  xxxxxx rom  files   Copy these files onto a bootable floppy and reboot your system  Follow the  Readme txt to continue flashing the BIOS     Question  What s on the CD that came with my motherboard     Answer  The supplied compact disc has quite a few drivers and programs  that will greatly enhance your system  We recommend that you review the  CD and install the applications you need  Applications on the CD include  chipset drivers for Windows and security and audio drivers     3 4 Returning Merchandise for Service    A receipt or copy of your invoice marked with the date of purchas
102. wer On      Make sure that there are no short circuits between the motherboard and    chassis       Disconnect all ribbon wire cables from the motherboard  including those    for the keyboard and mouse       Remove all add on cards     Install one CPU  making sure it is fully seated  and connect the chassis    speaker and the power LED to the motherboard   Check all jumper  settings as well        Use only the correct type of CMOS onboard battery as recommended by       oa A WwW MN    the Manufacturer  Do not install the onboard battery upside down to  avoid possible explosion           No Power      Make sure that there are no short circuits between the motherboard and    the chassis       Verify that all jumpers are set to their default positions      Check that the 115V 230V switch on the power supply is properly set     Turn the power switch on and off to test the system      The battery on your motherboard may be old  Check to verify that it still    supplies  3VDC  If it does not  replace it with a new one     No Video      If the power is on but you have no video  remove all the add on cards    and cables   Use the speaker to determine if any beep codes exist  Refer to the  Appendix for details on beep codes     SUPER    X6DH8 G2 X6DHE G2 User s Manual             NOTE  If you are a system integrator  VAR or OEM  a POST diagnos   tics card is recommended  For I O port 80h codes  refer to  App  B        Memory Errors    1  Make sure the DIMM modules are properly and ful
103. y for fast CPU data  processing and operation  The options are Uncached  Write Through   Write Protect  and Write Back     Discrete MTRR Allocation  If enabled  MTRRs   Memory Type Range Registers  are configured as  distinct  separate units and cannot be overlapped  If enabled  the user can  improve graphic performance when using a Linux graphic driver that  requires the write combining configuration with 4GB or more memory  The  options are Enabled and Disabled    PCI Configuration    Access the submenu to make changes to the following settings for PCI  devices     Onboard GLAN  Gigabit  LAN  OPROM Configure   Enabling this option provides the capability to boot from GLAN  The  options are Disabled and Enabled    Onboard SCSI OPROM Configure   Enabling this option provides the capitally to boot from SCSI HDD  The  options are Disabled and Enabled    Default Primary Video Adapter    This item allows the user to select the Primary Video Adapter between  two adapters instead of selecting among three or more adapters  The  options are Other and Onboard Video     4 9    SUPER   X6DH8 G2 X6DHE G2 User s Manual          PCI Parity Error Forwarding    Enable this item to forward the PCI errors occurring behind P2P bridges  to South Bridge  so NMI can be asserted  The options are Enabled and  Disabled    ROM Scan Ordering    This feature allows the user to decide which Option ROM to be activated  first  The options are Onboard Option ROM first and the Add On  Option ROM first    Res
    
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