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SuperMicro SuperServer 5013MT (5013C-MT)

1. Keyboard USB COM1 Parallel VGA Ethernet Port Ports Port Port Port Ports 6 2 Control Panel The control panel located on the front of the chassis must be connected to the JF1 connector on the motherboard to provide you with system control buttons and status indicators These wires have been bundled together in a ribbon cable to simplify the connection Connect the cable from JF1 on the motherboard to JP4 on the Control Panel PCB printed circuit board Make sure the red wire plugs into pin 1 on both JF1 and JP4 Pull all excess cabling out of the airflow path The LEDs inform you of system status See Chapter 3 for details on the LEDs and the control panel buttons Details on JF1 can be found in Chapter 5 Chapter 6 Advanced Chassis Setup 6 3 System Fans Three 4 cm high performance fans provide the cooling for the SuperServer 5013C MT The chassis includes air seals under the fans and at the chassis cross section which separates the drive bay area from the motherboard area of the chassis to promote better airflow It is highly important that the air seal is properly installed and making a good seal in order for the cooling air to circulate properly through the chassis System Fan Failure The fans run at a full 100 rpm If a fan fails you will need to have it replaced with the same type Contact your vendor or Supermicro for information on replacement fans
2. Reserved Reserved Reserved Read HDD boot sector information for Trend Anti Virus code Enable L2 cache Program boot up speed Chipset final initialization Power management final initialization Clear screen amp display summary table Program K6 write allocation Program P6 class write combining Program daylight saving Update keyboard LED amp typematic rate Build MP table Build amp update ESCD Set CMOS century to 20h or 19h Load CMOS time into DOS timer tick Build MSIRQ routing table Boot attempt INT 19h MBWNRIN FIN OV CA 4 CO P9 B 5 SUPERSERVER 5013C MT User s Manual Notes Appendix C Software Installation Appendix C Software Installation After all the hardware has been installed you must first configure the Adaptec Embedded Serial ATA RAID driver before you install the operating system The necessary drivers are all included on the Supermicro bootable CDs that came packaged with your motherboard C 1 Introduction to Serial ATA Serial ATA SATA Serial ATA SATA is a physical storage interface It uses a single cable with a minimum of four wires to create a point to point connection between devices It is a serial link which supports transfer rates from 150 MB s Because the serial cables used in SATA are thinner than the traditional cables used in Parallel ATA PATA SATA systems can be
3. Dual Channel DIMMs 4 DDR400 333 266 m gt DIMM gt DIMM CSA Gb Ethernet Controller 66MHz USB Ports 4 SATA Ports 2 ATA 100 Ports 2 LPC I O Figure 1 1 Intel E7210 Chipset System Block Diagram Note This is a general block diagram Please see Chapter 5 for details 1 4 Chapter 1 Introduction 1 3 Server Chassis Features The SuperServer 5013C MT is a 1U rackmount server platform configuration The following is a general outline of the main features of the SC813MT 300C chassis System Power When configured as a SuperServer 5013C MT the SC813MT 300C chassis in cludes a single 300W power supply Serial ATA Subsystem The SC813MT 300C chassis was designed to support up to four Serial ATA hard drives The Serial ATA drives are hot swappable units ATA 100 IDE drives are also supported Control Panel The SC813MT 300C s control panel provides important system monitoring and control information LEDs indicate power on network activity hard disk drive activity and overheat conditions The control panel also includes a main power button and a system reset button Rear I O Panel The rear I O panel on the SC813MT 300C provides one motherboard expansion slot one COM port another is internal two USB ports PS 2 mouse and key board ports a parallel printer port a graphics port and two Gb Ethernet ports Se
4. 6 4 Drive Bay Installation Removal Removing the Front Bezel If your system has a front bezel optional attached to the chassis you must first remove it to gain access to the drive bays To remove the bezel first unlock the front of the chassis then press the release knob see Figure 6 3 Carefully remove the bezel with both hands A filter located within the bezel can be re moved for replacement cleaning It is recommended that you keep a maintenance log of filter cleaning replacement since its condition will affect the airflow through out the whole system Figure 6 3 Removing the Front Bezel 1 Unlock 2 Press release knob 3 Remove bezel assembly SUPERSERVER 5013C MT User s Manual Accessing the Drive Bays Serial ATA Drives Because of their hotswap capability you do not need to access the inside of the chassis or power down the system to install or replace Serial ATA drives Proceed to the next step for instructions CD ROM Drive For installing removing a CD ROM drive you will need to gain access to the inside of the 5013C MT by removing the top cover of the chassis Proceed to the CD ROM Drive Installation section later in this chapter for instructions Note Only a slim CD ROM drive will fit into the 5013C MT Serial ATA Drive Installation 1 Mounting a Serial ATA drive in
5. This setting allows you to set the priority of removable devices The options are Floppy Disks LS120 Zip 100 USB FDDO USB FDD1 USB ZIPO and USB ZIP1 gt CD ROM Drives Boot Priority This item allows the user to specify the boot sequence of the available CD ROM Devices gt Hard Disk Boot Priority This item allows the user to select the Boot Priority of the following Hard Disk Devices First Boot Device This item allows the user to set the first boot up device The options are Removable Hard Disks CDROM Legacy LAN and Disabled Chapter 7 BIOS Second Boot Device This item allows the user to set the second boot up device The options are Removable Hard Disks CDROM Legacy LAN and Disabled Third Boot Device This item allows the user to set the Third boot up device The options are Removable Hard Disks CDROM Legacy LAN and Disabled Boot Other Device If enabled this option enables the BIOS to load the OS from another device rather than the ones that have been specified as the first second and third boot up devices The settings are Enabled and Disabled 7 7 Exit Choose Exit from the Award BIOS main menu with the Left Right arrow keys You should see the following display Sant amp Exile Serup Save amp Exit Setup When the item Save amp Exit Setup is highlighted press lt Enter gt to save the changes you ve made in the BIOS pr
6. tions Wake On LAN The Wake On LAN header is des ignated WOL on the motherboard See the table on the right for pin definitions You must enable the LAN Wake Up setting in BIOS to use this function You must also have a LAN card with a Wake On LAN connector and cable to use this feature Chassis Intrusion Pin Definitions JL1 Pin Number Definition 1 Intrusion Input 2 Ground Wake On LAN Pin Definitions WOL Pin Number Definition 1 5V Standby 2 Ground 3 Wake up Wake On Ring Wake On Ring Pin Definitions WOR The Wake On Ring header is desig nated WOR This function allows your Nba Definition computer to receive and be awak 1 Ground 2 Wake up ened by an incoming call when in the suspend state See the table on the right for pin definitions You must also have a WOR card and cable to use this feature ATX PS 2 Keyboard and PS 2 Mouse Ports The ATX PS 2 keyboard and the PS 2 mouse are located on J11 The mouse port is above the key board port See the table on the right for pin definitions PS 2 Keyboard and Mouse Port Pin Definitions J11 Pin Number Definition Data NC Ground VCC Clock NC DONARAN SUPERSERVER 5013C MT User s Manual Universal Serial Bus USB USB1 2 Pin Definitions Pin Definition There are two Universal Serial Bus d ports located on the I O panel an
7. J15 System Management Bus J16 Infrared Header J17 Power LED J20 ATX Power Connector J21 12V Power Connector J36 Keylock Connector J37 SATA LED Header Intel ports JF1 Front Control Panel JL1 Chassis Intrusion Header JP17 Power LED JS1 4 SATA Connectors 1 4 Marvell Controller JS9 SATA LED Header Marvell ports USB 1 2 Backpanel Universal Serial Ports 1 2 USB 3 4 Universal Serial Ports 3 4 for front side access WOL Wake On LAN WOR Wake On Ring Header 5 10 Chapter 5 Advanced Motherboard Setup 5 9 Connector Definitions ATX Power Supply 24 pin Connector Pin Definitions Pin Number Definition Pin Number Definition Power Supply Connectors D salt iav 14 12V 2 3 3V The primary power supply connector a ae end M on the P4SCT meets the SSI 17 COM 5 COM fina 18 COM 6 45V Superset ATX 24 pin specifica is COM 7 oH tion Refer to the table on the right 20 Res NC 8 PWR OK for the pin definitions of the ATX zc ae 24 pin power connector You 23 5V 11 12V 24 COM 12 3 3V must also connect the 4 pin J21 power connector to your power supply Refer to the table below Mirta right for the J24 12V connector J21 Important you must connect J21 to Required pins Definition your power supply to meet the ATX Connection 1 amp 2 Ground 3 amp 4 12V safety requirements PW ON Connector PW ON Pin Definitions JF1 The PW ON connector is located on Pin
8. None Auto and Manual Access Mode This item determines the location through which the AwardBIOS accesses the IDE Primary Master Device The settings are CHS LBA Large and Auto Base Memory Extended Memory Total Memory These are displays that inform you how much of each type of memory is recognized as being present in the system 7 3 SUPERSERVER 5013C MT User s Manual 7 4 Advanced BIOS Setup Choose Advanced BIOS Setup from the Award BIOS main menu with the Left Right arrow keys You should see the following display Select one of the items in the left frame of the screen to go to the sub screen for that item Advanced BIOS Setup options are displayed by highlighting the option using the arrow keys All Advanced BIOS Setup options are described in this section BF BIOS Pestures 7 4 1 Advanced BIOS Features When the item of Advanced BIOS Features is highlighted press the lt Enter gt key to activate the screen below Gu ioe Ent Quick Boot If enabled this feature allows the system to skip certain tests while booting This will decrease the time needed to boot the system The settings are Enabled and Disabled Quiet Boot This feature allows the user to activate the function of Quiet Boot The options are Enabled and Disabled 7 4 Chapter 7 BIOS ACPI Function Select Enabled to activate the function of BIOS Support for Advanced Configuration and Power Inte
9. pins 1 and 2 of JF1 This header Number EM should be connected to the chassis 2 43V power button which you may also configure to put the system into sus pend mode see the Power Button Mode setting in BIOS To turn off the power when the suspend mode is enabled depress the power button for at least 4 seconds See the table on the right for pin definitions 5 11 SUPERSERVER 5013C MT User s Manual Reset Connector Reset Pin Definitions The reset connector is located on JF1 pins 3 and 4 of JF1 and attaches TUM Donmfon to the reset switch on the com 3 Reset 4 Ground puter chassis See the table on the right for pin definitions Overheat LED OH Overheat OH LED Pin Definitions JF1 Connect an LED to the OH connec Pin tion on pins 7 and 8 of JF1 to pro Sumber ain vide advanced warning of chassis 8 GND overheating Refer to the table on the right for pin definitions GLAN2 LED GLAN2 LED Pin Definitions The GLAN2 LED connection is lo E EM in cated on pins 9 and 10 of JF1 At Number Definition tach the GLAN2 LED cable to dis PN Sgn play GLAN2 activity Refer to the table on the right for pin definitions GLAN1 LED i GLAN1 LED Pin Definitions The GLAN1 LED connection is lo JF1 cated on pins 11 and 12 of JF1 At murum NM tach the GLAN1 LED cable to dis n Hb play GLAN1 activity Refer to the table on the right for
10. 7 2 1 3 Main BIOS Setup etti ie eren stet nip eaves 7 2 7 4 Advanced BIOS Setup pei eid o edere ode e 7 4 7 4 1 Advanced BIOS Features sse 7 4 7 4 2 Advanced Chipset Control aene 7 5 7 4 3 VO Device Configuratioti rir rete 7 7 7 4 4 PnP Configuration m 7 4 5 Console Redirection essen 7 10 7 4 6 Hardware Monitor errem mrs 7 11 7 4 7 Processor and Clock Options seen 7 12 VEM DUUM adanthar ie ioe casera 7 13 MOS BOO enero t M MIU LA 7 14 Mid Sai 7 15 Appendices Appendix A BIOS POST Messages sssseennenenemmneneemnrenenne A 1 Appendix B BIOS POST Codes F Appendix C Software Installation terrent ttes C 1 Appendix D System Specifications resine iiiaae D 1 SUPERSERVER 5013C MT User s Manual Notes Chapter 1 Introduction Chapter 1 Introduction 1 1 Overview The Supermicro SuperServer 5013C MT is a high end single processor 1U rackmount server The 5013C MT is comprised of two main subsystems the SC813MT 300C chassis and the P4SCT motherboard The P4SCT supports a single 478 pin Intel Pentium 4 microPGA processor at up to 3 40 GHz with HT hyper threading technology or single a Intel Celeron processor of up to 2 80 GHz and up to 4 GB of ECC or non ECC unbuffered DDR400 333 266 SDRAM memory Please refer to our web site for information on operating systems that
11. See the Figure below for a display of the Supero Doctor III interface Figure C 2 Supero Doctor Ill Interface Display Health Information Note For Linux we recommend using Supero Doctor II SUPERSERVER 5013C MT User s Manual Notes Appendix D System Specifications Appendix D System Specifications Processors Single Intel Pentium 4 processor of up to 3 40 GHz with HT technology processors must be 0 09 or 0 13 micron technology or Intel Celeron processors of up to 2 80 GHz at a 800 533 400 MHz front side bus speed Chipset Intel E7210 Memory Capacity Four 4 DIMM slots to support a maximum of 4 GB ECC unbuffered DDR400 333 low profile SDRAM dual channel memory DIMM Sizes 128 MB 256 MB 512 MB 1 GB 184 pin modules supported Operating Systems Supported Windows NT Windows 2000 Solaris Netware SCO UNIX and Linux Serial ATA Controller 6300ESB controller hub incorporated into chipset Serial ATA Backplane SATA backplane CSE SATA 813 for four 4 SATA drives Main Drive Bays Four 4 drive bays to house four 4 standard 1 SATA drives Peripheral Bays One 1 slim CD ROM drive PCI Expansion Slots One 1 64 bit 66 MHz 3 3V PCI X slot bundled with a riser card Motherboard Model P4SCT ATX Form Factor Dimensions 12 x 9 5 in 305 x 241 mm D 1 SUPERSERVER 5013C MT User s Manual Chassis Model SC813MT 300C 1U Rackmount Dimensions WxHxD 17 2 x 1 7 x 19
12. Speaker Jumper Settings J18 Pins Definition 1 through 4 External Spkr 3and4 Internal Spkr Chapter 5 Advanced Motherboard Setup Keyboard Wake Up Keyboard Wake Up Jumper Settings The JPWAKE jumper is used to al JPWAKE low the system to be woken up by Jumper Position Definition depressing a key on the keyboard 1 2 Disabled from an S1 or S3 state in Win ES Fnabled dows OS See the table on the right for jumper settings Your power supply must meet ATX Specification 2 01 or higher and supply 720 mA of standby power to use this feature GLAN 2 Enable Disable GLAN2 Enable Disable Jumper Settings JPL2 Change the setting of jumper JPL2 to eem eree enable or disable the onboard Position Definition GLAN2 port on the motherboard a I eines See the table on the right for jumper settings The default setting is En abled For LAN1 please change the setting in the BIOS VGA Enable Disable VGA Enable Disable Jumper Settings 333 J33 allows you to enable or disable J umper the VGA port The default position Position Dem enabled See the table on the right 23 Disabled for jumper settings Keylock Enable Disable Keylock Enable Disable Jumper Pa The Keylock header is located at Jumper J36 Close the jumper to enable the Position Definition 7 On Enabled Keylock function and leave the Off Disabled jumper
13. definitions See the Technical 2 CIRRX i 3 IRRX Support section of our web page for 4 Ground information on the infrared devices 2 R you can connect to the system Serial Ports Serial Port Pin Definitions COM1 COM2 Two serial ports are included on the Pin Number Definition Pin Number Definition 1 CD 6 DSR motherboard COM1 is a port lo 2 RD 7 RTS cated beside the mouse keyboard 2 UN rn ports and COM2 is a header located 5 Ground 10 NC on the motherboard near the J20 power connector See the table on the right for pin definitions Note Pin 10 is included on the header but not on the port NC indicates no connec tion Fan Headers Fan Header Pin Definitions CPU Chassis and Overheat There are six fan headers on the Pin n r Definition P4SCT which are designated CPU Number 1 Ground black Chassis Fan1 Chassis Fan2 Chas 2 12V red 3 Tachomet sis Fan3 Chassis Fan4 and OH sone Caution These fan headers are DC power Overheat Chassis Fan5 Chassis Fan 3 and Chassis Fan 4 are not monitored by BIOS Connect the fan on your CPU heatsink to the CPU Chassis Fan1 header See the table on the right for pin definitions 5 14 Chapter 5 Advanced Motherboard Setup Chassis Intrusion The Chassis Intrusion header is des ignated JL1 See the board layout in Chapter 1 for the location of JL1 and the table on the right for pin defini
14. installed in smaller chassis than PATA In addition PATA cables can only extend to 40cm while SATA cables can extend up to one meter Overall SATA provides better functionality than PATA Intel 6300ESB I O Controller Hub Located in the South Bridge of Intel s E7210 chipset the 6300ESB I O Controller Hub provides the I O subsystem with access to the rest of the system In addition to supporting a dual channel Ultra ATA 100 Bus Master IDE controller PATA the 6300ESB also supports two SATA host controllers which provides support for up to two SATA ports and up to two RAID drives The 6300ESB supports the PATA and SATA device configurations listed below ATA Operating Modes You can select from the following two modes Combined Mode and Enhanced Mode Combined Mode In this mode system BIOS assigns the traditional IRQ 14 and IRQ 15 for HDD use Up to four ATA devices are supported by this mode Within the Combined Mode the following three modes are supported Non Combined Mode Parallel ATA only with a maximum of four devices supported C 1 SUPERSERVER 5013C MT User s Manual Non Combined Mode SATA only with a maximum of two devices supported Combined Mode SATA and PATA devices with support for two devices of each for a total of four devices maximum For IDE PATA SATA configurations please refer to the table below Primary Master PM Yes Yes No No No No Primary Slave PS Yes No Yes No No No Se
15. pushing the cover away from you until it stops You can then lift the top cover from the chassis to gain full access to the inside of the server If already installed in a rack you must first release the retention screws that secure the unit to the rack Then grasp the two handles on either side and pull the unit straight out until the rails lock into place Check compatibility of motherboard ports and I O shield The P4SCT requires a chassis big enough to support a 12 x 9 5 motherboard such as Supermicro s SC813MT 300C 1U rackmount Make sure that the I O ports on the motherboard align properly with their respec tive holes in the I O shield at the back of the chassis Mounting the motherboard onto the motherboard tray Carefully mount the motherboard to the motherboard tray by aligning the board holes with the raised metal standoffs that are visible on the bottom of the chassis Insert screws into all the mounting holes on your motherboard that line up with the standoffs and tighten until snug if you screw them in too tight you might strip the threads Metal screws provide an electrical contact to the motherboard ground to provide a continuous ground for the system Chapter 5 Advanced Motherboard Setup 5 3 Connecting Cables Now that the motherboard is installed the next step is to connect the cables to the board These include the data ribbon cables for the peripherals and control panel and the power cables Conne
16. sure the motherboard is properly installed and all the connections have been made 1 Accessing the inside of the 5013C MT Figure 2 4 First release the retention screws that secure the unit to the rack Grasp the two handles on either side and pull the unit straight out until it locks you will hear a click Next depress the two buttons on the top of the chassis to release the top cover while pushing the cover away from you until it stops You can then lift the top cover from the chassis to gain full access to the inside of the server 2 Check the CPU processor You may have one processor already installed into the system board The processor should have its own heatsink attached See Chapter 5 for instruc tions on processor installation 3 Check the system memory Your 5013C MT server system may have come with system memory already installed Make sure all DIMMs are fully seated in their slots For details on adding system memory refer to Chapter 5 4 Installing add on cards If desired you can install an add on card to the system See Chapter 5 for details on installing a PCI add on card 5 Check all cable connections and airflow Make sure all power and data cables are properly connected and not blocking the airflow See Chapter 5 for details on cable connections Also check the air seals for damage The air seals are located under the blower fan and beneath the frame cross section that separates the drive bay area from the
17. the right of these items SUPERMICRO PASET Motherboard Drivers amp Tools Win MET SUPERMICR Drivers amp Tools J iari Disci 10 ML A ATI Geta hivei hipaet PASCT go Al Adagdec Borage Manage Bioweti E dition g S SUPERM CAD Supsi Doct H gj Lj Euk dieti daketer and mari e Bwa p dede Up He Tere For anone ini penaltion please viet SUPEI CRI y pant cde S3 PEFICFEI Compute Inc Figure C 1 Driver Tool Installation Screen You may also click the icons showing a hand writing on paper to view the readme files for each item Click the computer icons to the right of these items to install each item from top to the bottom one at a time After installing each item you must re boot the system before moving on to the next item on the list You should install everything here except for the SUPER Doctor utility which is optional The bottom icon with a CD on it allows you to view the entire contents of the CD Appendix C Software Installation Supero Doctor Ill The Supero Doctor III program is a Web base management tool that supports remote management capability It includes Remote and Local Management tools The local management is called SD III Client The Supero Doctor III program included on the CDROM that came with your motherboard allows you to monitor the environment and operations of your system Supero Doctor III displays crucial system information such as CPU temperature system voltages and fan status
18. the top cover and push it away from you You can then lift the top cover from the chassis to gain full access to the inside of the server 2 Removing the power supply First unplug the power cord from the system To remove the failed power unit remove the two screws on the back of the power supply which secure it to the chassis You can then lift the unit straight out of the chassis The power cord should have already been removed 3 Installing a new power supply Replace the failed unit with another unit of the same wattage It is highly recommended to replace it with the exact same power supply Carefully insert the new unit into position in the chassis and secure it with the two screws at the rear of the unit Before reconnecting the power cord make sure the power switch on the power supply is in the off position Then reconnect the power cord replace the chassis top cover and push the unit back into the rack Finish by turning the power switch on the power supply on and then depress the power button on the front of the System SUPERSERVER 5013C MT User s Manual Notes Chapter 7 BIOS 7 1 Chapter 7 BIOS Introduction This chapter describes the AwardBIOS for the P4SCT The Award ROM BIOS is stored in a Flash chip and can be easily upgraded using a floppy disk based program Note Due to periodic changes to the BIOS some settings may have been added or deleted and might not yet be recorded in this manu
19. 00 DDR266 133 533 266 DDR266 333 DDR333 400 DDR333 200 800 266 DDR266 333 DDR320 400 DDR400 The BIOS displays DDR320 due to a chipset limitation Figure 5 5 DIMM Installation q 4 Notch ros Note Notch should align with the receptive point on the slot To Install Insert module vertically and press down until it snaps into place Pay attention to the bottom notch To Remove Use your thumbs to gently push each release tab outward to free the DIMM from the slot 5 7 SUPERSERVER 5013C MT User s Manual Figure 5 6 Top View of DIMM Slot Top View of DDR Slot Release Tab IL IL Release Tab 5 7 Adding PCI Cards 1 64 bit PCI X slot The 5013C MT comes with a riser card that supports one standard size 64 bit 66 MHz PCI X 3 3V card This riser card allows a single PCI X card to sit at a 90 degree angle so it can fit inside the chassis 2 PCI card installation The system should be powered down when adding or removing PCI cards Begin by removing the top cover of the chassis You will see a metal enclosure that houses the riser card Remove this housing by lifting the two plastic levers at either end and pulling the housing up and out of the chassis The riser card is attached to the inside top of the housing Release the latch that secures the PCI slot I O shields to the housing by pulling it away from the housing Remove the shield and insert a PC
20. 7 5 75 62 5 50 37 5 25 and 12 5 7 4 3 1 0 Device Configuration Choose I O Device Configuration from the Award BIOS main menu with the Left Right arrow keys You should see the following display inboard Parallel Port Keyboard Input Clock This setting allows to you set the speed of the keyboard The options are 6 MHz 8 MHz 12 MHz and 16 MHz Onboard Serial Port1 Onboard Serial Port2 This setting allows the user to set the address and the corresponding IRQ for the Serial Porti and Serial Port 2 The options are Disabled 3F8 IRQ4 2F8 IRQ3 3E8 IRQ4 2E8 IRQ3 and Auto The default setting for Serial Porti is 3F8 IRQ4 and the default for Port 2 is 2F8 IRQ3 SUPERSERVER 5013C MT User s Manual UART Mode Select This setting allows the user to select the UART mode for the BIOS The options are IrDA ASKIR and Normal RxD TxD Active This allows the user to change the settings for the RxD TxD Active function The options are Hi Hi Hi Lo Lo Hi and Lo Lo IR Transmission Delay If Enabled the transmission of IR infrared signals will be delayed The options are Enabled and Disabled UR2 Duplex Mode This setting set the mode for the UR2 Duplex Mode The options are Full and Half Use IR Pins This item sets the usage of the IR pins The options are RxD2 TxD2 and IR Rx2Tx2 Onboard Parallel Port This setting allows the use
21. 85 in 437 x 43 x 504 mm Weight Gross Weight 38 Ibs 17 3 kg System Cooling Three 3 4 cm high performance fans FAN 0061 System Input Requirements AC Input Voltage 100 240 VAC Rated Input Current 5A 115V to 2A 230V Rated Input Frequency 50 to 60 Hz Power Supply Rated Output Power 300W Model SP302 1S Part PWS 0054 Rated Output Voltages 3 3V 15A 5V 15A 12V1 15A 12V2 15A 12Vtotal 20A 12V 1A 5Vsb 2A BTU Rating 1470 BTUs hr for rated output power of 300W Operating Environment Operating Temperature 10 to 35 C 50 to 90 F Non operating Temperature 40 to 70 C 40 to 158 F Operating Relative Humidity 8 to 90 non condensing Non operating Relative Humidity 5 to 95 non condensing Regulatory Compliance Electromagnetic Emissions FCC Class B EN 55022 Class B EN 61000 3 2 3 3 CISPR 22 Class B Electromagnetic Immunity EN 55024 CISPR 24 EN 61000 4 2 EN 61000 4 3 EN 61000 4 4 EN 61000 4 5 EN 61000 4 6 EN 61000 4 8 EN 61000 4 11 Safety EN 60950 IEC 60950 Compliant UL Listed USA CUL Listed Canada TUV Certified Germany CE Marking Europe D 2
22. CPUs Spread Spectrum Spread Spectrum is a technique used to stablize a system by reducing the level of ElectroMagnetic Interference The options are Enabled and Disabled CPU Clock Key in a number between 100 and 233 to set the CPU clock MHz Supermicro does not recommend or make any guarantees with CPU overclocking The default setting is 200 MHz Chapter 7 BIOS 7 5 Security Choose Security from the Award BIOS main menu with the Left Right arrow keys You should see the following display Daperelbacr Puakiwacd Set Supervisor Password When the item Set Supervisor Password is highlighted on the above Screen press the Enter key When prompted type the Supervisor Password in the dialogue box to set or to change the Supervisor Password Set User Password When the item Set User Password is highlighted on the above screen press the Enter key When prompted type the User Password in the dialogue box to set or to change the User Password Password Check This setting allows the user to determine if the password is required every time when the system boots up or if the password is required only when you enter the CMOS setup The options are System and Setup SUPERSERVER 5013C MT User s Manual 7 6 Boot Choose Boot from the Award BIOS main menu with the Left Right arrow keys You should see the following display k Herd Disk Boot Priorita gt Removable Device Priority
23. EMORY ose ropes tra ete ete bn eter t trf eth eo a E o red Adding POl Cards eet ree e C ten a D e c dnd Motherboard Details essssssssssseseseeeeeeeneee nnne PASOT4 bayoti P4SCT Quick Reference Connector DefinilloI8 eoece cr tries seco eee ev ea cer e des Power Supply Connectors cecceccsscecesseeeeeseeeeeeeeeaeeseeseeeeeeaeeaesseeaeeeaes PW ON GContHieclots eei EPOR ak Gr ORE IER Reset CONNECTION ee te eae ne hie deii eed ETER EEN AORERE Overheat MED OL rete pet ictor edm cie PAPE GLANT LED o nnne eran nete teret e dern s DE LE D nir EH HE Rd NERELER Power LED Connector NMI BURO 5 ot retenti e eir Persae rie endete ts SMB H ader ence DI nan Ranma IR Connector aee fretta herr ees ee EXE esci ese a Spe NEAN ag Serial Ports Fan Headers aie tede tere esee ceg de depu iar ca teseeEastdasdescastsgpacbaessas CHASSIS Intr SiOl s o eoo rrr roti ree eee terr eee rr erbe remit Wake On LAN E HU R SUPERSERVER 5013C MT User s Manual Wake On RING is iere rc epe eee aaepe een 5 15 ATX PS 2 Keyboard and PS 2 Mouse Ports seesi 5 15 Universal Serial BUS 4 irri rette mein GLAN1 2 Ethernet Ports SATA EED Marvell x itta crece Fe tate det eed Waves SATA LED Intel eerte etr tinere her eee teres bee 5 10 Jumper Settings rere tecnici I ree cen anani Explanationiot JUMPEN S isss prt erret iE Reg GMOS Clai cioe needed ee h
24. FTWARE OR DATA STORED OR USED WITH THE PRODUCT INCLUDING THE COSTS OF REPAIRING REPLACING INTEGRATING INSTALLING OR RECOVERING SUCH HARDWARE SOFTWARE OR DATA Any disputes arising between manufacturer and customer shall be governed by the laws of Santa Clara County in the State of California USA The State of California County of Santa Clara shall be the exclusive venue for the resolution of any such disputes Supermicro s total liability for all claims will not exceed the price paid for the hardware product Unless you request and receive written permission from SUPER MICRO COMPUTER you may not copy any part of this document Information in this document is subject to change without notice Other products and companies referred to herein are trademarks or registered trademarks of their respective companies or mark holders Copyright 2004 by SUPER MICRO COMPUTER INC All rights reserved Printed in the United States of America Preface Preface About This Manual This manual is written for professional system integrators and PC technicians It provides information for the installation and use of the SuperServer 5013C MT Installation and maintainance should be performed by experienced technicians only The SuperServer 5013C MT is a high end single processor 1U rackmount server based on the SC813MT 300C 1U rackmount server chassis and the Super P4SCT motherboard The P4SCT supports a single Intel Pentium 4 proc
25. I X card into the slot on the riser card pushing down with your thumbs evenly on both sides of the card After the card has been added push the latch back into position Replace the housing in the serverboard making sure the plastic levers properly catch on the chassis then push them down to lock the housing in place Finish by replacing the top chassis cover and powering up the system Note The PCI slot I O shields protect the serverboard and its components from EMI and aid in proper ventilation so make sure there is always a shield covering the slot Chapter 5 Advanced Motherboard Setup 5 8 Motherboard Details Figure 5 7 P4SCT Layout not drawn to scale C JPWAKE J17 PWR LED Keyboard JpusB com2 J10 ATX Power Connector J21 Mouse J1 wor C3 J20 12V Power Connector z o lt JP20 cm GLAN Controller 5 uu amp JP8 WD 5 9 82547 2 r1 COMI J9 o E amp t oL CPU 5 E s 478 mPGA d J8 E a VGA OH CH FANS GLAN1 DIMMOA BANKO L DIMMOB GLA
26. N2 DIMM1A BANK1 LL DIMM1B J3 GLAN Controller SATA PORTS Intel JFi J4 82541 J16 IR Ei PCI X 1 T 6300ESB 2 g 2 Hance Rapids r r PCI X 2 o 6 JPL2 woL JBT1 CMOS CLR PCI X 3 o ssa a J15 E n ABS BIOS 153 o PCI 1 a o t AW T Marvell Js2 amp n x P nacex Og sartery 88SX5040 o a ilg z 4S1 mo USB3 4 RISE tc SATA Controller o wil w Ww FAEERE PCI 2 CH FAN4 o 333 us gig C JS7 SATA LED Intel dis Ca COC r 3use sATA LED Marveir L7 11 J5 92 Jumpers not indicated are for test purposes only SUPERSERVER 5013C MT User s Manual P4SCT Quick Reference Jumpers Description Default Setting J18 Speaker Pins 3 4 Int Buzzer J33 VGA Enable Disable Pins 1 2 Enabled J36 Keylock Header Open Disabled JBT1 CMOS Clear See Section 5 10 JP1 JP2 CPU Clock Speed Pins 1 2 Auto JP8 Watch Dog Reset Pins 1 2 WD Reset JP20 Power Force On Open Disabled JPL2 GLAN2 Enable Disable Pins 1 2 Enabled JPS1 JS1 4 SATA En Dis Pins 1 2 Enabled JPUSB USB1 2 Wake Up En Dis Pins 1 2 Disabled JPWAKE Keyboard Wake Up Pins 1 2 Disabled Connectors Description DIMMOA 0B 1A 1B Memory DIMM Slots Fans 1 5 CPU CH Fan1 CH Fan2 3 4 OH Fan CH Fan 5 GLAN1 2 Gigabit LAN Ports J2 J5 IDE1 2 Ports J3 J4 SATA Connectors 1 2 Intel Controller J7 Floppy Disk Drive Connector J8 Parallel Printer Port J9 J10 COM1 J9 COM2 J10 J11 Keyboard Mouse Connector
27. R of MI CPU 2 Initialize L2 cache for P6 class CPU amp program CPU with proper cacheable range 3 Initialize the APIC for P6 class CPU 4 On MP platform adjust the cacheable range to smaller one in case the cacheable ranges between each CPU are not identical 4Fh Reserved 50h Initialize USB 51h Reserved 52h Test all memory clear all extended memory to 0 53h Reserved 54h Reserved 55h Display number of processors multi processor platform 56h Reserved 57h 1 Display PnP logo 2 Early ISA PnP initialization Assign CSN to every ISA PnP device SUPERSERVER 5013C MT User s Manual POST hex Description 58h Reserved 59h Initialize the combined Trend Anti Virus code 5Ah Reserved 5Bh Optional Feature Show message for entering AWDFLASH EXE from FDD optional 5Ch Reserved 5Dh 1 Initialize Init Onboard Super IO switch 2 Initialize Init Onboard AUDIO switch 5Eh Reserved 5Fh Reserved 60h Okay to enter Setup utility i e not until this POST stage can users enter the CMOS setup utility 61h Reserved 62h Reserved 63h Reserved 64h Reserved 65h Initialize PS 2 Mouse 66h Reserved 67h Prepare memory size information for function call INT 15h ax E820h 68h Reserved 69h Turn on L2 cache 6Ah Reserved 6Bh Program chipset registers according to items described in Setup amp Auto configuration tabl
28. SUPERO SUPERSERVER 5013C MT a i ul B USER S MANUAL Revision 1 0a The information in this User s Manual has been carefully reviewed and is believed to be accurate The vendor assumes no responsibility for any inaccuracies that may be contained in this document makes no commitment to update or to keep current the information in this manual or to notify any person or organization of the updates Please Note For the most up to date version of this manual please see our web site at www supermicro com SUPERMICRO COMPUTER reserves the right to make changes to the product described in this manual at any time and without notice This product including software if any and documentation may not in whole or in part be copied photocopied reproduced translated or reduced to any medium or machine without prior written consent IN NO EVENT WILL SUPERMICRO COMPUTER BE LIABLE FOR DIRECT INDIRECT SPECIAL INCIDENTAL SPECULATIVE OR CONSEQUENTIAL DAMAGES ARISING FROM THE USE OR INABILITY TO USE THIS PRODUCT OR DOCUMENTATION EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGES IN PARTICULAR THE VENDOR SHALL NOT HAVE LIABILITY FOR ANY HARDWARE SO
29. VGA BIOS and put it into C000 0 24h Reserved 25h Reserved 26h Reserved 27h Initialize INT 09 buffer 28h Reserved 29h Program CPU internal MTRR P6 amp PII for 0 640K memory address Initialize the APIC for Pentium class CPU Program early chipset according to CMOS setup Example onboard IDE controller Measure CPU speed Invoke video BIOS 2Ah Reserved 2Bh Reserved 2Ch Reserved Appendix B BIOS POST Codes POST hex Description 2Dh I Initialize multi language 2 Put information on screen display including Award title CPU type CPU speed 2Eh Reserved 2Fh Reserved 30h Reserved 31h Reserved 32h Reserved 33h Reset keyboard except Winbond 977 series Super I O chips 34h Reserved 35h Reserved 36h Reserved 37h Reserved 38h Reserved 39h Reserved 3Ah Reserved 3Bh Reserved 3Ch Test 8254 3Dh Reserved 3Eh Test 8259 interrupt mask bits for channel 1 3Fh Reserved 40h Test 8259 interrupt mask bits for channel 2 A4lh Reserved 42h Reserved 43h Test 8259 functionality 44h Reserved 45h Reserved 46h Reserved 47h Initialize EISA slot 48h Reserved 49h 1 Calculate total memory by testing the last double word of each 64K page 2 Program writes allocation for AMD K5 CPU 4Ah Reserved 4Bh Reserved 4Ch Reserved 4Dh Reserved 4Eh 1 Program MTR
30. a drive carrier The Serial ATA drives are mounted in drive carriers to simplify their installa tion and removal from the chassis These carriers also help promote proper airflow for the Serial ATA drive bays For this reason even empty carriers without Serial ATA drives installed must remain in the chassis To adda new Serial ATA drive install a drive into the carrier with the printed circuit board side toward the carrier so that the mounting holes align with those in the carrier Secure the drive to the carrier with six screws see Figure 6 4 Figure 6 4 Mounting a Drive in a Carrier 6 4 Chapter 6 Advanced Chassis Setup Use caution when working around the Serial ATA AN backplane Do not touch the backplane with any metal objects and make sure no ribbon cables touch the backplane or obstruct the holes which aid in proper airflow 2 Installing removing hot swap Serial ATA drives Four Serial ATA drive bays are located in the front of the chassis making them easily accessible for installation and removal These drives are hot swappable meaning they can be installed and removed without powering down the system To remove first push the release button located beside the drive LEDs then swing the handle fully out and use it to pull the unit straight out Important The Serial ATA drive carrier must remain in the drive bays to maintain proper airflow Serial ATA Power Cables Serial ATA power cables should be routed so
31. agement logic and supports dual channel interleaved DDR memory providing bandwidth of up to 6 4 GB s using DDR400 SDRAM The MCH supports configu rations of a 800 MHz FSB with a 400 333 memory interface a 533 MHz FSB with a 333 266 memory interface and a 400 MHz FSB with a 266 MHz memory interface The MCH supports 128 MB 256 MB 512 MB 1 GB x4 x8 and x16 DDR Maximum system memory supports up to 4 0 GB for dual channel ECC or Non ECC unbuffered DDR Registered and or mixed mode DIMMs are not supported For more information please refer to Chapter 5 I O Controller Hub 6300ESB The 6300ESB ICH provides the I O subsystem with access to the rest of the system Itintegrates a dual channel Ultra ATA 100 bus master IDE controller two Serial ATA SATA host controllers the SMBus 2 0 controller the LPC Flash BIOS interface the PCI X 66MHz 1 0 interface the PCI 2 2 interface and the System Management Controller Chapter 1 Introduction Processors The P4SCT supports a single Intel Pentium 4 processor of up to 3 40 GHz with hyper threading technology in a 478 pin microPGA socket must be 0 09 or 0 13 micron technology or single a Intel Celeron processor of up to 2 80 GHz Please refer to the support section of our web site for a complete listing of supported processors http www supermicro com support Memory The P4SCT has four 4 184 pin DIMM sockets that can support up to 4 GB of ECC or non ECC unbuffe
32. al Refer to the Manual Download area of our web site for any changes to BIOS that are not reflected in this manual System BIOS The BIOS is the Basic Input Output System used in all IBM PC XT AT and PS 29 compatible computers The AwardBIOS Flash chip stores the system parameters such as amount of memory type of disk drives and video displays etc CMOS requires very little power When the computer is turned off a back up battery provides power to the BIOS Flash chip enabling it to retain the system parameters Each time the computer is powered on the computer is then con figured with the values stored in the BIOS ROM by the system BIOS which gains control when the computer is powered on How To Change the Configuration Data The CMOS information that determines the system parameters may be changed by entering the BIOS Setup utility This Setup utility can be accessed by press ing Del at the appropriate time during system boot Starting the Setup Utility Normally the only visible POST Power On Self Test routine is the memory test As the memory is being tested press the Delete key to enter the main menu of the BIOS Setup utility From the main menu you can access the other setup Screens such as the Chipset and Power menus Section 4 3 gives detailed descriptions of each parameter setting in the Setup utility 7 1 SUPERSERVER 5013C MT User s Manual 7 2 Running Setup Optimal default settings are
33. ar Inner Rails First locate the right rear inner rail the rail that will be used on the right side of the chassis when you face the front of the chassis Align the two square holes on the rail against the hooks on the right side of the chassis Securely attach the rail to the chassis with M4 flat head screws Repeat these steps to install the left rear inner rail to the left side of the chassis see Figure 2 1 You will also need to attach the rail brackets when installing into a telco rack Locking Tabs Both chassis rails have a locking tab which serves two functions The first is to lock the server into place when installed and pushed fully into the rack which is its normal position Secondly these tabs also lock the server in place when fully extended from the rack This prevents the server from coming completely out of the rack when you pull it out for servicing 24 Chapter 2 Server Installation Figure 2 1 Installing Rear Inner Chassis Rails Installing the Rack Rails Determine where you want to place the SuperServer 5013C MT in the rack see Rack and Server Precautions in Section 2 3 Position the chassis rail guides at the desired location in the rack keeping the sliding rail guide facing the inside of the rack Screw the assembly securely to the rack using the brackets pro vided Attach the other assembly to the other side of the rack making sure that both are at the exact same height and with the rail guides fac
34. ators The power supply power cords must include a grounding plug and must be plugged into grounded electrical outlets 4 1 SUPERSERVER 5013C MT User s Manual Motherboard Battery CAUTION There is a danger of explosion if the onboard battery is installed upside down which will reverse its polarites This battery must be replaced only with the same or an equivalent type recommended by the manufacturer Dispose of used batteries according to the manufacturer s instructions CD ROM Laser CAUTION this server may have come equipped with a CD ROM drive To prevent direct exposure to the laser beam and hazardous radiation exposure do not open the enclosure or use the unit in any unconventional way 4 2 General Safety Precautions A Follow these rules to ensure general safety Keep the area around the SuperServer 5013C MT clean and free of clutter The SuperServer 5013C MT weighs approximately 38 Ibs 17 3 kg when fully loaded When lifting the system two people at either end should lift slowly with their feet spread out to distribute the weight Always keep your back straight and lift with your legs Place the chassis top cover and any system components that have been removed away from the system or on a table so that they won t accidentally be stepped on While working on the system do not wear loose clothing such as neckties and unbuttoned shirt sleeves which can come into contact with elec
35. condary Master SM Yes No No Yes No No Secondary Slave SS Yes No No No Yes No SATA PortO No SM ISM PM PM PM SATA Portl No SS SS PS PS PS Note No Not Present Yes Present Also if Logical Primary is selected the IDE channels are no longer available Enhanced Mode In this mode system BIOS will automatically search for all available IRQs for HDD use For newer operating systems that support Enhanced Mode such as WindowsXP Windows2000 and Windows2003 you can set SATA and PATA to the Enhanced Mode These newer operating systems can accommodate both En hanced and Combined Modes and support up to six ATA devices Please refer to Advanced Chipset Control under the Advanced setup section in BIOS to select Combined Mode or Enhanced Mode Appendix C Software Installation C 2 Intel Hance Rapids Driver Installation a Insert Supermicro s bootable CD that came with the server into the CD drive and restart the system Upon reboot a screen entitled Super Micro Driver Diskette Maker will appear b Choose from the list the item Intel Hance Rapids Driver by 3rd Party Adaptec and press lt Enter gt c On the next screen displayed choose the OS driver you want to install and press lt Enter gt d Insert a formatted diskette into floppy A drive and press lt Enter gt as prompted e Exit the program after the process is completed Then reboo
36. cting Data Cables The ribbon cables used to transfer data from the peripheral devices have been carefully routed to prevent them from blocking the flow of cooling air that moves through the system from front to back If you need to discon nect any of these cables you should take care to keep them routed as they were originally after reconnecting them make sure the red wires connect to the pin 1 locations The following data cables with their locations noted should be connected See the layout on page 5 10 for connector locations IDE Device cable J5 Serial ATA Device cables JS1 JS2 JS3 and JS4 Serial ATA active LED cable JS9 Control Panel cable JF1 Connecting Power Cables The P4SCT has a 24 pin primary power supply connector ATX Power at J20 for connection to the ATX power supply In addition there is a 4 pin secondary power connector at J21 that also must be connected to your power supply See Chapter 5 for power connector pin definitions Connecting the Control Panel JF1 contains header pins for various front control panel connectors See Figure 5 1 for the pin locations of the various front control panel buttons and LED indicators All JF1 wires have been bundled into a single ribbon cable to simplify this connection Make sure the red wire plugs into pin 1 as marked on the board The other end connects to the Control Panel PCB board located just behind the system status LEDs on the chassis See Chapt
37. d an 3 P0 additional two USB headers located A rovny on the motherboard These head ers labeled USB3 4 can be used to USB3 4 Pin Definitions Pin Pin provide front side chassis access Number Definition Number Definition 1 45V 2 45V cables not included See the tables 3 PO 4 PO on the right for pin definitions on R Ft 10 Ground GLAN1 2 Ethernet Ports Two Ethernet ports designated GLAN1 and GLAN2 are located beside the VGA port on the IO backplane These ports accept RJ45 type cables SATA LED Marvell SATA LED Pin Definitions JS9 The SATA LED header located on Pin Definition Pin Definition 1 SATA1 6 NC JS9 is used to display all SATA ac 2 SATA2 7 NC tivity on the JS1 JS4 SATA ports 3 P lita Ne Marvell SATA controller See the 5 rn 10 Key omm table on the right for pin definitions Intel s SATA LED SATA LED Intel Pin Definitions J37 The SATA LED header located on Pin Number Definition J37 is used to display all SATA ac 1 SATA tivity on the J3 and J4 SATA ports rela Intel SATA controller See the 4 NC 5 NC table on the right for pin definitions 5 16 Chapter 5 Advanced Motherboard Setup 5 10 Jumper Settings Explanation of Jumpers To modify the operation of the motherboard jumpers can be used to choose between optional set tings Jumpers create shorts be tween two pins to change the fu
38. drive It will be on the left side of the drive when viewed from the front of the chassis Pull the tab away from the drive and push the drive unit out the front of the chassis Add a new drive by following this procedure in reverse order You may hear a faint click of the locking tab when the drive is fully inserted Remember to reconnect the data and power cables to the drive before replacing the chassis cover and restoring power to the system Chapter 6 Advanced Chassis Setup 6 5 Power Supply The SuperServer 5013C MT has a single 300 watt power supply This power supply has the capability of operating at 100 or 240 input volts Depress the main power button on the front of the chassis and then unplug the AC power cord to completely remove power from the system before removing the power supply Power Supply Failure If the power supply unit fails the system will shut down and you will need to replace the power supply unit Replacement units can be ordered directly from Supermicro PWS 0054 see contact infomation in Chapter 1 Replacing the Power Supply 1 Accessing the inside of the SuperServer 5013C MT To replace a power supply you must first remove the top chassis cover To do so first release the retention screws that secure the unit to the rack Grasp the two handles on either side and pull the unit straight out until it locks you will hear a click Next depress the two buttons on the top of the chassis to release
39. e 6Ch Reserved 6Dh 1 Assign resources to all ISA PnP devices 2 Auto assign ports to onboard COM ports if the corresponding item in Setup is set to AUTO 6Eh Reserved 6Fh 1 Initialize floppy controller 2 Set up floppy related fields in 40 hardware 70h Reserved 71h Reserved 72h Reserved 73h Optional Feature Enter AWDFLASH EXE if AWDFLASH is found in floppy drive ALT F2 is pressed 74h Reserved 75h Detect amp install all IDE devices HDD LS120 ZIP CDROM 76h Reserved TIh Detect serial ports amp parallel ports 78h Reserved 79h Reserved 7Ah Detect amp install co processor 7Bh Reserved 7Ch Reserved 7Dh Reserved 7Eh Reserved 7Fh 1 Switch back to text mode if full screen logo is supported If errors occur report errors amp wait for keys If no errors occur or F1 key is pressed to continue Clear EPA or customization logo Appendix B BIOS POST Codes POST hex Description Reserved Reserved 1 Call chipset power management hook 2 Recover the text font used by EPA logo not for full screen logo 3 If password is set ask for password Save all data in stack back to CMOS Initialize ISA PnP boot devices 1 USB final Initialization NET PC Build SYSID structure Switch screen back to text mode Set up ACPI table at top of memory Invoke ISA adapter ROMs Assign IRQs to PCI devices Initialize APM Clear noise of IRQs Reserved Reserved Reserved Reserved
40. e Figure 1 2 SUPERSERVER 5013C MT User s Manual Cooling System The SC813MT 300C chassis has an innovative cooling design that features three 4 cm high performance cooling fans The fans plug into headers on the motherboard and operates at full rom continuously Figure 1 2 Rear I O Panel O el wes z CIO OO eO e Ag gO EEr E i t Ji Oo e ie qe 7 Xo Se Jo io elL e wale ac IDO cara5 le c QUOOUOOO CY coe n dis 1 Mouse S i S 1 2 EIF Keyboard USB COM1 Parallel VGA Ethernet Port Ports Port Port Port Ports 2 1 6 Chapter 1 Introduction 1 4 Contacting Supermicro Headquarters Address SuperMicro Computer Inc 980 Rock Ave San Jose CA 95131 U S A Tel 1 408 503 8000 Fax 1 408 503 8008 Email marketing supermicro com General Information support supermicro com Technical Support Web Site www supermicro com Europe Address SuperMicro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro nl General Information support supermicro nl Technical Support rma supermicro nl Customer Support Asia Pacific Addre
41. ed by the fan 5 Supplying power to the system The last thing you must do is to provide input power to the system Plug the power cord from the power supply unit into a high quality power strip that offers protection from electrical noise and power surges It is recommended that you use an uninterruptible power supply UPS 2 10 Chapter 3 System Interface Chapter 3 System Interface 3 1 Overview There are several LEDs on the control panel and one on the Serial ATA drive carrier to keep you constantly informed of the overall status of the system as well as the activity and health of specific components There are also two buttons on the chassis control panel This chapter explains the meanings of all LED indi cators and the appropriate response you may need to take 3 2 Control Panel Buttons There are two push button buttons located on the front of the chassis These are in order from left to right a reset button and a power on off button RESET E wy e RESET The reset switch reboots the system e POWER This is the main power switch which is used to apply or turn off the main system power Turning off system power with this button removes the main power but keeps standby power supplied to the system SUPERSERVER 5013C MT User s Manual 3 3 Control Panel LEDs The control panel located on the front of the SC813MT 300C chassis has five LEDs These LEDs provide you with critical information related t
42. entation that came with your disk drive for details on actual jumper locations and settings for the hard disk drive Parallel Port Connector Parallel Printer Port Pin Definitions J8 d Pin Number Function Pin Number Function The parallel port is located on J8 1 robs gt AEF See the table on the right for pin 3 Data Bito 4 Error s 5 DataBiti 6 Init definitions 7 DataBit2 8 SLCT IN 9 DataBit3 10 GND 11 DataBit4 12 GND 13 DataBit5 14 GND 15 DataBit6 16 GND 17 DataBit7 18 GND 19 ACK 20 GND 21 BUSY 22 GND 23 PE 24 GND 25 SLCT 26 NC 5 21 SUPERSERVER 5013C MT User s Manual Floppy Connector The floppy connector is located on J7 See the table on the right for pin definitions IDE Connectors There are no jumpers to config ure the onboard IDE interfaces J2 and J5 See the table on the right for pin definitions You must use the ATA100 66 cable included with your system to benefit from the ATA100 66 technology Floppy Connector Pin Definitions J7 Pin Number Function Pin Number Function 1 GND 2 FDHDIN 3 GND 4 Reserved 5 Key 6 FDEDIN 7 GND 8 Index 9 GND 10 Motor Enable 11 GND 12 Drive Select B 18 GND 14 Drive Select A 15 GND 16 Motor Enable 17 GND 18 DIR 19 GND 20 STEP 21 GND 22 Write Data 23 GND 24 Write Gate 25 GND 26 Track 00 27 GND 28 Write Protect 29 GND 30 Read Data 31 GND 32 Side 1 Select 33 GND 34 Diskette IDE Connect
43. er 5 for details and pin descriptions SUPERSERVER 5013C MT User s Manual Figure 5 1 Control Panel Header Pins NMI O Ground X e e X Power LED Oo Vcc IDE LED ojo Vcc LAN1 LED ojo Vcc LAN2 LED ojo Vcc Overheat LED olo Vcc X o0 X Ground O Reset gt Reset Button Ground pwr gt Power Button 5 4 I O Ports The I O ports are color coded in conformance with the PC 99 specification See Figure 5 2 below for the colors and locations of the various I O ports Figure 5 2 I O Port Locations Mouse Green Parallel Port Burgundy Lib Keyboard USB 0 1 Ports COM1 Port Turquoise VGA Port Blue GLAN1 GLAN2 Purple Note The COM2 port is a header on the motherboard located near the ATX power connector 5 4 Chapter 5 Advanced Motherboard Setup 5 5 Installing Processors Avoid placing direct pressure to the top of the processor IN package Always remove the power cord first before adding removing or changing any hardware components Processor Support The P4SCT has a single 478 pin microPGA socket which supports Intel Pentium 4 processors on 013 micron process 1 Lift the lever on the CPU socket 2 Install the CPU in the socket Make sure that Pin 1 of the CPU is seated on Pin 1 of the socket both corners are marked with a triangle 3 Press the lever down until you hear it cl
44. es sor of up to 3 40 GHz processors must be 0 09 or 0 13 micron technology and Intel Celeron processors of up to 2 80 GHz Manual Organization Chapier 1 Introduction The first chapter provides a checklist of the main components included with the server system and describes the main features of the Super P4SCT motherboard and the SC813MT 300C chassis Chapier 2 Server Installation This chapter describes the steps necessary to install the SuperServer 5013C MT into a rack and check out the server configuration prior to powering up the system If your server was ordered without the processor and memory components this chapter will refer you to the appropriate sections of the manual for their installation Chapier 3 System Interface Refer to this chapter for details on the system interface which includes the functions and information provided by the control panel on the chassis as well as other LEDs located throughout the system SUPERSERVER 5013C MT User s Manual Chapter 4 System Safety You should thoroughly familiarize yourself with this chapter for a general overview of safety precautions that should be followed when installing and servicing the SuperServer 5013C MT Chapter 5 Advanced Motherboard Setup Chapter 5 provides detailed information on the P4SCT motherboard including the locations and functions of connectors headers and jumpers Refer to this chapter when adding or removing processors or main me
45. etect flash type to load appropriate flash R W codes into the run time area in F000 for ESCD amp DMI support 11h Reserved 12h Use walking 1 s algorithm to check out interface in CMOS circuitry Also set real time clock power status and then check for override 13h Reserved 14h Program chipset default values into chipset Chipset default values are MODBINable by OEM customers 15h Reserved 16h Initial Early_Init_Onboard_Generator switch 17h Reserved 18h Detect CPU information including brand SMI type Cyrix or Intel and CPU level 586 or 686 19h Reserved 1Ah Reserved 1Bh Initial interrupts vector table If no special specified all H W interrupts are directed to SPURIOUS_INT_HDLR amp S W interrupts to SPURIOUS_soft_HDLR 1Ch Reserved 1Dh Initial EARLY_PM_INIT switch 1Eh Reserved 1Fh Load keyboard matrix notebook platform 20h Reserved 21h HPM initialization notebook platform 22h Reserved 23h 1 Check validity of RTC value e g a value of 5Ah is an invalid value for RTC minute 2 Load CMOS settings into BIOS stack If CMOS checksum fails use default value instead 3 Prepare BIOS resource map for PCI amp PnP use If ESCD is valid take into consideration of the ESCD s legacy information 4 Onboard clock generator initialization Disable respective clock resource to empty PCI amp DIMM slots 5 Early PCI initialization Enumerate PCI bus number Assign memory amp I O resource Search for a valid VGA device amp
46. fety precautions in Chapter 4 Determine the placement of each component in the rack before you install the rails Install the heaviest server components on the bottom of the rack first and then work up Use a regulating uninterruptible power supply UPS to protect the server from power surges voltage spikes and to keep your system operating in case of a power failure Allow the power supply units and hot plug Serial ATA drive to cool before touching them Always keep the rack s front door and all panels and components on the servers closed when not servicing to maintain proper cooling 2 2 Chapter 2 Server Installation Rack Mounting Considerations Ambient Operating Temperature If installed in a closed or multi unit rack assembly the ambient operating temperature of the rack environment may be greater than the ambient temperature of the room Therefore consideration should be given to installing the equipment in an environment compatible with the manufacturer s maximum rated ambient temperature Tmra Reduced Airflow Equipment should be mounted into a rack so that the amount of airflow required for safe operation is not compromised Mechanical Loading Equipment should be mounted into a rack so that a hazardous condition does not arise due to uneven mechanical loading Circuit Overloading Consideration should be given to the connection of the equipment to the power supply circuitry and the effect that an
47. have been certified for use with the 5013C MT www supermicro com and for regular updates on supported processor speeds In addition to the motherboard and chassis various hardware components may have been included with the 5013C MT as listed below e One CPU heatsink SNK P0002 e One 1 slim CD ROM drive e Serial ATA SATA Accessories One 1 internal SATA backplane CSE SATA 813 Four 4 SATA cables CBL 0074 One 1 SATA LED cables CBL 0069 Four 4 SATA drive carriers CSE PT39 o One 1 3 3V 64 bit 66 MHz PCI X slot riser card CSE RR1U X e Rackmount hardware with screws Two 2 rack rail assemblies Six 6 brackets for mounting the rack rails in a rack telco rack e One 1 CD containing drivers and utilities e SuperServer 5013C MT User s Manual 1 1 SUPERSERVER 5013C MT User s Manual 1 2 Motherboard Features At the heart of the SuperServer 5013C MT lies the P4SCT a single processor motherboard designed to provide maximum performance Below are the main features of the P4SCT Chipset Overview The P4SCT is based on Intel s E7210 chipset see Figure 1 1 for a block diagram The E7210 chipset is made up of two main components The Memory Controller Hub MCH The I O Controller Hub 6300ESB Memory Controller Hub MCH The MCH controls the flow of data between the host CPU interface the memory interface and the I O Controller Hub interface It contains advanced power man
48. hen handling The following measures are generally sufficient to protect your equipment from electric static discharge Precautions Use a grounded wrist strap designed to prevent Electric Static Discharge ESD Touch a grounded metal object before removing any board from its anti static bag Handle a board by its edges only do not touch its components periph eral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the motherboard add on cards and peripherals back into their anti static bags when not in use For grounding purposes make sure your computer chassis provides ex cellent conductivity between the power supply the case the mounting fasteners and the motherboard SUPERSERVER 5013C MT User s Manual Unpacking The motherboard is shipped in antistatic packaging to avoid electrical static discharge When unpacking the board make sure the person handling it is static protected 5 2 Motherboard Installation This section explains the first step of physically mounting the P4SCT into the SC813MT 300C chassis Following the steps in the order given will eliminate the most common problems encountered in such an installation To remove the motherboard follow the procedure in reverse order 1 Accessing the inside of the 5013C MT see Figure 2 5 Two release buttons are located on the top cover of the chassis Depressing both of these buttons while
49. ick into the locked position 4 Apply the proper amount of thermal com pound to the CPU die Place the heatsink on top of the CPU aligning its holes with those on the retention mechanism Screw in two diago nal screws ie the 1 and 2 screws until just snug then do the same with the remaining two screws Finish by fully tightening all four screws see Figure 5 4 on next page SUPERSERVER 5013C MT User s Manual Figure 5 3 478 pin Socket Empty and with Processor Installed Figure 5 4 Heatsink SNK P0002 Installation 56 Chapter 5 Advanced Motherboard Setup 5 6 Installing Memory CAUTION Exercise extreme care when installing or remov ing DIMM modules to prevent any possible damage 1 Memory support The P4SCT supports 4 GB of dual channel ECC or non ECC unbuffered DDR 400 333 266 SDRAM You must populate both DIMMOA and DIMM1A and or DIMMOB and DIMM1B with the same size and type of memory modules This will result in dual channel two way interleaved operation which is faster than single channel operation 2 Installing memory modules Insert each memory module vertically Pay attention to the notch along the bottom of the module to prevent inserting it incorrectly Gently press down on the DIMM module until it snaps into place in the slot see Figure 5 5 Memory Speeds Host Clock FSB MHz DRAM Data Shown during MHz MT s POST 100 400 266 DDR266 333 DDR266 4
50. in bold text unless otherwise noted The BIOS setup options described in this section are selected by choosing the appropriate text from the Main BIOS Setup screen All displayed text is de scribed in this section although the screen display is often all you need to understand how to set the options see on next page When you first power on the computer the AwardBIOS is immediately activated While the BIOS is in control the Setup program can be activated in one of two ways 1 By pressing Del immediately after turning the system on or 2 When the following message appears briefly at the bottom of the screen during the POST Power On Self Test press the Del key to activate the Main Setup Menu Press DEL to enter SETUP 7 3 Main BIOS Setup All Main Setup options are described in this section The Main BIOS Setup screen is displayed below Use the Up Down arrow keys or the Tab key to move among the different settings in the above menu Press the Esc key to exit the CMOS Setup Menu and use the Left Right arrow keys to enter the other categories of BIOS settings The next section is described in detail to illustrate how to navigate through the menus Main BIOS Setup Menu Date nab ee Chapter 7 BIOS Date Time Set the system date and time Key in the correct information in the mm dd and yy fields Press the Enter key to save the data Legacy Diskette A This sett
51. ing allows the user to set the type of floppy disk drive installed as diskette A The options are None 360Kb 5 25 in 1 2MB 5 25 in 720Kb 3 5 in 1 44 MB 3 5 in and 2 88MB 3 5 in Legacy Diskette B This setting allows the user to set the type of floppy disk drive installed as diskette B The options are None 360Kb 5 25 in 1 2MB 5 25 in 720Kb 3 5 in 1 44 MB 3 5 in and 2 88MB 3 5 in PIDE Channel 0 Master Slave IDE Channel 1 Master Slave IDE Channel 2 Master IDE Channel 3 Master These settings allow the user to set the parameters of the IDE Channel 0 Master Slave IDE Channel 1 Master Slave IDE Channel 1 Master Slave IDE Channel 2 Master IDE Channel 3 Master slots Hit lt Enter gt to activate the sub menu screen for detailed options of these items Set the correct configurations accordingly IDE HDD Auto Detection This option allows the user to determine the manner in which the AwardBlOS sets the settings for the IDE Primary Master Device The options are None Auto and Manual IDE Channel 0 Master Slave IDE Channel 1 Master Slave IDE Channel 2 Master IDE Channel 3 Master Press the lt Auto gt key to activate the function of IDE HDD Auto Detection which will allow the BIOS to automatically detect the status of the IDE HDD installed in the system such as the size the number of cylinders the configurations of items such as Head Precomp Landing Zone and Sector The options are
52. ing inward 2 5 SUPERSERVER 5013C MT User s Manual Installing the Server into the Rack You should now have rails attached to both the chassis and the rack unit The next step is to install the server into the rack Do this by lining up the rear of the chassis rails with the front of the rack rails Slide the chassis rails into the rack rails keeping the pressure even on both sides you may have to depress the locking tabs when inserting See Figure 2 2 When the server has been pushed completely into the rack you should hear the locking tabs click Finish by inserting and tightening the thumbscrews that hold the front of the server to the rack Figure 2 2 Installing the Server into a Rack with optional front bezel shown 2 6 Chapter 2 Server Installation Installing the Server into a Telco Rack If you are installing the SuperServer 5013C MT into a Telco type rack follow the directions given on the previous pages for rack installation The only difference in the installation procedure will be the positioning of the rack brackets to the rack They should be spaced apart just enough to accomodate the width of the telco rack Figure 2 3 Installing the Server into a Telco Rack with optional front bezel shown 2 7 SUPERSERVER 5013C MT User s Manual 2 5 Checking the Motherboard Setup After you install the 5013C MT in the rack you will need to open the unit to make
53. mory and when reconfiguring the motherboard Chapter 6 Advanced Chassis Setup Refer to Chapter 6 for detailed information on the SC813MT 300C 1U rackmount server chassis You should follow the procedures given in this chapter when installing removing or reconfiguring Serial ATA or peripheral drives and when replacing system power supply units and cooling fans Chapter 7 BIOS The BIOS chapter includes an introduction to BIOS and provides detailed information on running the CMOS Setup Utility Appendix A BIOS POST Messages Appendix B BIOS POST Codes Appendix C Software Installation Appendix D System Specifications Preface Notes SUPERSERVER 5013C MT User s Manual Table of Contents Preface About This Mantali 2 nre ertet ttti tenter ien it iii Maruabo9rgamizatialia soie tere tarertret rere eer ere reerrer eer sere peer rereer rer tree ae ssec iii Chapter 1 Introduction 1 1 Overview wa Tl 1 2 Motherboard Features essssssssssssseseeeeeee nnne nnne tenens enne 1 2 1 3 Server Chassis Features uot rtr ner epic fes 1 5 1 4 Contacting SuperMicro Liner retreat 1 7 Chapter 2 Server Installation MEO TL 2 1 2 2 Unpacking the SuperServer 5013C MT seen 2 1 2 9 Preparing for Setup eret nd tea d nee iced e ies 2 1 Choosing a Setup Location uie cen De treat 2 2 Rack Precautions Server P
54. motherboard area of the chassis Note Make sure that the air seals are properly installed 2 8 Chapter 2 Server Installation Figure 2 4 Accessing the Inside of the SuperServer 5013C MT 2 9 SUPERSERVER 5013C MT User s Manual 2 6 Checking the Drive Bay Setup Next you should check to make sure the peripheral drives and the Serial ATA drive and Serial ATA backplane have been properly installed and all essen tial connections have been made 1 Accessing the drive bays All drives can be accessed from the front of the server For servicing the CD ROM and floppy drives you will need to remove the top chassis cover The Serial ATA disk drive can be installed and removed from the front of the chassis without removing the top chassis cover 2 Installing a CD ROM and floppy disk drives Refer to Chapter 6 if you need to reinstall a CD ROM and or floppy disk drive to the system 3 Check the Serial ATA disk drive Depending upon your system s configuration your system may have one Serial ATA drive already installed If you need to install a Serial ATA drive please refer to the appropriate section in Chapter 6 4 Check the airflow Airflow is provided by three 4 cm high performance fans The system compo nent layout was carefully designed to promote sufficient airflow through the small 1U rackmount space Also note that all power and data cables have been routed in such a way that they do not block the airflow generat
55. nction of the connector Pin 1 is identified with a square solder pad on the printed circuit board See the motherboard layout pages for jumper locations Note On a two pin jumper Closed means the jumper is on both pins and Open means the jumper is either on only one pin or completely removed CMOS Clear Connector Pins a 2 j Jumper Cap 38 21 Pin 1 2 short JBT1 is used to clear CMOS which will also clear any passwords Instead of pins this jumper consists of contact pads to prevent accidentally clearing the contents of CMOS To clear CMOS 1 First unplug the power cord s 2 With the power disconnected short the CMOS pads with a metal object such as a small screwdriver 3 Remove the screwdriver or shorting device 4 Reconnect the power cord s and power on the system Note Do not use the PW ON connector to clear CMOS Front Side Bus Speed JP1 and JP2 are used to set the sys tem front side bus speed for the processors It is best to keep these jumpers set to Auto These jumpers are used together with the CPU Clock setting in BIOS See the table on the right for jumper settings 5 17 Front Side Bus Speed JP1 JP2 JP1 JP2 FSB Speed Pins 1 2 Pins 1 2 Auto Pins 2 3 Pins 2 3 100 MHz x4 NC Pins 2 3 133 MHz x4 NC NC Reserved Pins 2 3 NC 200 MHz x4 Note NC stands for No Connection SUPERSERVER 5013C MT User s Manual USB Wake Up U
56. near a grounded power outlet Read the Rack and Server Precautions in the next section 2 3 Preparing for Setup The box the SuperServer 5013C MT was shipped in should include two sets of rail assemblies six rail mounting brackets and the mounting screws you will need to install the system into the rack Follow the steps in the order given to complete the installation process in a minimal amount of time Please read this section in its entirety before you begin the installation procedure outlined in the sections that follow 2 1 SUPERSERVER 5013C MT User s Manual Choosing a Setup Location Leave enough clearance in front of the rack to enable you to open the front door completely 25 inches Leave approximately 30 inches of clearance in the back of the rack to allow for sufficient airflow and ease in servicing AN Warnings and Precautions ZN Rack Precautions Ensure that the leveling jacks on the bottom of the rack are fully extended to the floor with the full weight of the rack resting on them In a single rack installation stabilizers should be attached to the rack n multiple rack installations the racks should be coupled together Always make sure the rack is stable before extending a component from the rack You should extend only one component at a time extending two or more simultaneously may cause the rack to become unstable Server Precautions Review the electrical and general sa
57. ns are RAID and IDE On Chip Serial ATA This setting allows you to configure On Chip Chipset Configurations Select Disabled to disable SATA controller If Auto is selected BIOS will automatically configure the settings for SATA controller Select Combined Mode to combine the functionality of Parallel ATA PATA and Serial ATA SATA with the maximum of two IDE drives available for each channel If Enhanced Mode is selected both SATA and PATA are supported with the maximum of 6 IDE drives available If SATA Only is selected SATA will operate in the Legacy Mode The options are Disabled Auto Combined Mode Enhanced Mode and SATA only Serial ATA Port0 1 mode This setting allows you to configure Serial ATA Port0 1 modes The options are Primary Master Primary Slave Secondary Master Secondary Slave SATAO Master and SATA1 Master USB Controller This setting allows you to enable or disable the USB Controller The options are Enabled and Disabled USB 2 0 Controller This setting allows you to enable or disable USB 2 0 EHCI Controller The options are Enabled and Disabled Chapter 7 BIOS USB Legacy Support This setting allows you to enable or disable the functions of USB Keyboard Mouse under POST and DOS The options are Disabled and Enabled CPU THRM Throttling THRM throttling is used to lower power consumption and reduce the heat generated by the CPU The options for this setting are 8
58. o different parts of the system This section explains what each LED indicates when illuminated and any corrective action you may need to take i e OVERHEAT Indicates an overheat condition in the chassis This may be caused by cables obstructing the airflow in the system or the ambient room temperature being too warm You should also check to make sure that the chassis cover is installed and that all fans are present and operat ing normally Finally check the air seals for damage The air seals are located under the blower fan and beneath the frame cross section that separates the drive bay area from the motherboard area of the chassis NIC2 e NIC2 Indicates network activity on GLAN2 when flashing AE NIC1 e NIC1 Indicates network activity on GLAN1 when flashing g e HDD Channel activity for all HDDs This light indicates CD ROM and SATA drive activity when flashing Chapter 3 System Interface e Power Indicates power is being supplied to the system s power supply units This LED should normally be illuminated when the system is operating 3 4 Serial ATA Drive Carrier LEDs On the front of each Serial ATA drive carrier is a green LED When illuminated it indicates drive activity A connection to the Serial ATA backplane enables this LED to blink on and off when that particular drive is being accessed SUPERSERVER 5013C MT User s Manual Notes Chapter 4 System Safety Chapter 4 System Safet
59. o edet etd Eront Side BUs Sp68d ee mm eet hein et USB WAke Lp nihii ete ro Perte rate eden Watch Dog Enable Disable irises too een city er reca Speaker Jumper Keyboard Wake Up ecrini retener eren renta Fere pers GLAN2 Enable Disable 5 x 5 2 nr trie Ei VGA sEnable Disable rto e e eerie Keylock Enable Disable rentre 5 11 Onboard Indicators 2 nehme beret omina dne eios Standby Power ED niit nre roe nere 5 12 Parallel Port Floppy and Hard Drive Connections sssussss 5 21 ParalleliPortCORnecloE seu enne rere ue Deere etes 5 21 Floppy Connector IDE CONNEC tO Serua a tree erii apetece terreri er eges Chapter 6 Advanced Chassis Setup 6 1 Static Sensitive Devices oo ee ees esceseeseeeeeeeeeseeaeeseeeeeseeeaeeaeeaessetaeteeteaeeaees 6 1 6 2 Control Panels TE E ae x ate d EE 6 2 6 3 System Falls rir rete estda berti bed O rD oi nie det a EES 6 3 System Fan Failure uit canto a ade 6 3 6 4 Drive Bay Installation Removal essen 6 3 Removing the Front Bezel Accessing the Drive Bays Serial ATA Drive Installation CD ROM Drive Installation 6 5 Power Supply zorro n o Rm A Aca Power Supply Failure zi Replacing the Power Supply i rine t veered 6 7 viii Table of Contents Chapter 7 BIOS HAM MOUCHO S cn eres cosas rates Etre e et iid E reete dr E Paride dr paa aa 7 1 7 2 Burning Setup iuuenes peer reote err e ER E RE
60. ogram CMOS and exit Your system should then continue with the boot up procedure Exit without Saving When the item Exit without Saving is highlighted press lt Enter gt to exit the Setup routine without saving any changes you may have made Your sys tem should then continue with the boot up procedure SUPERSERVER 5013C MT User s Manual Load Fail Safe Defaults Highlight this item and hit lt Enter gt to load the default settings for all items in the BIOS Setup These are the safest settings to use Load Optimized Defaults Highlight this item and hit lt Enter gt to load the optimized settings for all items in the BIOS Setup These settings provide you with optimal system performance Discard Changes When the item Discard Changes is highlighted press lt Enter gt to discard any changes you made to the BIOS settings and to stay in BIOS Setup Your system should then continue with the boot up procedure 7 16 Appendix A BIOS POST Messages Appendix A BIOS POST Messages During the Power On Self Test POST the BIOS will check for problems If a problem is found the BIOS will activate an alarm or display a message The following is a list of such BIOS messages Beeps Error Message 1 long beep Memory Modules Errors 1 long beep 2 short beeps VGA Errors A 1 SUPERSERVER 5013C MT User s Manual Notes A 2 Appendix B BIOS POST Codes Appendix B BIOS POST Codes This section li
61. on The options are 1 Min 2 Min 4 Min and 8 Min Chapter 7 BIOS Agent after Boot Select Disabled to allows the Agent of Console Redirection to continue running after OS bootup The Options are Enabled and Disabled 7 4 6 Hardware Monitor Choose Hardware Monitor from the Award BIOS main menu with the Left Right arrow keys You should see the following display CPU Warning Temperature This allows you to set the CPU warning temperature If the CPU temperature reaches this threshold an alarm will activate and a warning message will be displayed onscreen The options are Disabled 60 C 140 F 65 C 149 F 70 C 158 F 75 C 167 F 80 C 176 F and 85 C 185 F SUPERSERVER 5013C MT User s Manual 7 4 7 Processor amp Clock Options Limit CPUID MaxVal This feature allows the user to set the limit for the CPUID Maximum Value The value can be set from 1 to 3 The options are Enabled and Disabled For Windows XP the option should be set to Disabled Hyper Threading Technology Select Enabled to activate the hyper threading function of the CPUs to make each CPU appear as if there were two CPUs to any programs that support it you must have OS support also The settings are Disabled and Enabled CPU Clock Ratio Key in a number between 8x to 50x to set the clock ratio of the processor The default setting is 8x 8x is only available for retail
62. open off to disable it The default setting is open See the table on the right for jumper settings 5 19 SUPERSERVER 5013C MT User s Manual SATA Enable SATA Enable Disable Jumper Settings JPS1 JSP1 is used to enable or disable QUO Marvell s Serial ATA Controller See Position Definition the table on right for pin definitions ie aera 5 11 Onboard Indicators Standby Power LED The Standby Power LED indicator is designated LE2 When the Standby PWR LED is on it indicates the system standby power is on 5 20 Chapter 5 Advanced Motherboard Setup 5 12 Parallel Port Floppy and Hard Drive Connections Use the following information to connect the floppy and hard disk drive cables The floppy disk drive cable has seven twisted wires Ared mark on a wire typically designates the location of pin 1 Asingle floppy disk drive ribbon cable has 34 wires and two connectors to provide for two floppy disk drives The connector with twisted wires always connects to drive A and the connector that does not have twisted wires always connects to drive B The 80 wire ATA100 66 IDE hard disk drive cable that came with your system has two connectors to support two drives This special cable should be used to take advantage of the speed this new technology offers The blue connector connects to the onboard IDE connector interface and the other connector s to your hard drive s Consult the docum
63. or Pin Definitions J2 J5 Pin Number Function Pin Number Function 1 Reset IDE 2 GND 3 Host Data 7 4 Host Data 8 5 Host Data 6 6 Host Data 9 7 Host Data 5 8 Host Data 10 9 Host Data 4 10 Host Data 11 11 Host Data 3 12 Host Data 12 18 Host Data 2 14 Host Data 13 15 Host Data 1 16 Host Data 14 17 Host Data 0 18 Host Data 15 19 GND 20 Key 21 DRQ3 22 GND 23 O Write 24 GND 25 O Read 26 GND 27 IOCHRDY 28 BALE 29 DACK3 30 GND 31 IRQ14 32 lOCS16 33 Addr 1 34 GND 35 Addr 0 36 Addr 2 37 Chip Select 0 38 Chip Select 1 39 Activity 40 GND 5 22 Chapter 6 Advanced Chassis Setup Chapter 6 Advanced Chassis Setup This chapter covers the steps required to install components and perform main tenance on the SC813MT 300C chassis For component installation follow the steps in the order given to eliminate the most common problems encountered If some steps are unnecessary skip ahead to the step that follows Tools Required The only tool you will need to install components and perform maintainance is a Philips screwdriver 6 1 Static Sensitive Devices Electric Static Discharge ESD can damage electronic components To prevent damage to any printed circuit boards PCBs it is important to handle them very carefully The following measures are generally suffi cient to protect your equipment from ESD discharge Precautions Use a grounded wrist strap designed to prevent static discharge Touch a grounded me
64. pin definitions Chapter 5 Advanced Motherboard Setup IDE LED IDE Activity LED Pin Definitions JF1 The IDE LED is located on pins 13 Pin and 14 of JF1 This LED is used to MEUS e c display all IDE and SATA activity 14 HD Activity on all drives See the table on the right for pin definitions Power LED Connector PWR LED Pin Definitions JF1 Pi The Power LED connector is located Number Definition on pins 15 and 16 of JF1 or you may b o use J17 for a 3 pin connector This connection is used to provide LED J17 indication of power being supplied to Pin Definitions the system See the table on the Eun NR Number Definition right for pin definitions 1 5V 2 Key 3 Ground NMI Button NMI Button Pin Definitions JF1 The non maskable interrupt button Pin Number Definition header is located on pins 19 and 20 19 Ground of JF1 Refer to the table on the right 20 Control for pin definitions SMB Header SMB Header Pin Definitions J15 Pin A System Management Bus header umber Deinen is located at J15 Connect the ap 1 Data 2 Ground propriate cable here to utilize SMB 3 Clock on your system 4 No Connection 5 13 SUPERSERVER 5013C MT User s Manual IR Connector Infrared Pin Definitions J16 The infrared connector is located on Pin J16 See the table on the right for Number Definition 1 35V pin
65. r to set the address and the corresponding IRQ for the onboard parallel port The options are Disabled 378 IRQ7 278 IRQ5 and SBC IRQ7 Parallel Port Mode This setting sets the mode for the onboard Parallel port The options are SPP EPP ECP ECP EPP and Normal EPP Mode Select This setting allows the user to select the EPP port type The options are EPP 1 9 and EPP 1 7 ECP Mode Use DMA This setting allows the user to select the DMA channel for the ECP mode port to use The options are 1 and 3 Watch Dog Timer Select This setting allows you to select the setting for the Watch Dog Timer The Options are Disabled 10 Sec 20 Sec 30 Sec 40 Sec I min 2 min and 4 min 7 8 Chapter 7 BIOS Power On Function This setting allows the user to decide which method to use to power on the system The options are Password Hot Key Mouse Left Mouse Right Any Key and Button Only KB Power On Password This setting allows the user to enter the Password when the system is powered on via keyboard Hot Key Power On This setting allows the user to decide which hot keys to use in order to power on the system The options are Ctrl F1 Ctrl F2 Ctrl F3 Ctrl F4 Ctrl F5 Ctrl F6 Ctrl F7 Ctrl F8 Ctrl F9 Ctrl F10 Ctrl F11 and Ctrl F8 7 4 4 PnP Configuration Choose PCI PnP Configurations from the Award BIOS main menu with the Left Right arrow key
66. recaution sd a n erro iie wen rerit AN Rack Motinting Considerations ee eoe 2 3 2 4 Installing the SuperServer 5013C MT into a Rack sees 2 4 Identifying the Sections of the Rack Rails ssssse 2 4 Installing the Rear Inner Rails tne 2 4 Installing the Rack Ralls 22 o nr ttt tns 2 5 Installing the Server into the Rack seen 2 6 Installing the Server into a Telco Rack ssne 2 7 2 5 Checking the Motherboard Setup wad 2 6 Checking the Drive Bay Setup ence te ence eee Chapter 3 System Interface Ol OVENIEW asec tse ei heh On et e c e e erts 3 1 3 2 Control Panel Buttons niii aceite decocta 3 1 vi Table of Contents Chapter 4 System Safety 4 1 4 2 4 3 4 4 Electrical Safety Precautions General Safety Precautions 0 0 cecceeseeeeeceeeeeeeeeeeeeesneeeeeeeesaeeeseeneeeeeeaeeas ESDiPre Cautions npo nni em mE HB NNE Operating Precaution eren Iri ena rk erae Eo FR PERS PARTE REN Chapter 5 Advanced Motherboard Setup 5 1 5 2 5 3 5 4 5 6 5 7 5 8 5 9 Handling the P4SCT Motherboard esee 5 1 Motherboard Installation rne rn ti tnit Connecting Cables sssssssseeeneneeeee nennen ennt Connecting Data Cables Connecting Power Cables tee poeni td 5 3 Connecting the Control Panel getto eee 5 3 Heg Installing ProCOSSOMS tnter tree neris Installing M
67. red DDR400 333 266 SDRAM modules Memory oper ates in a dual channel or interleaved configuration for increased performance Low profile memory modules are required for use in the 1U form factor of the 5013C MT Module sizes of 128 MB 256 MB 512 MB and 1 GB may be used to populate the DIMM slots Serial ATA A Serial ATA controller is incorporated into the E7210 chipset to provide a two port Serial ATA subsystem PCI Expansion Slots The P4SCT has two 32 bit 33 MHz 5V PCI slots and three 64 bit 66 MHz 3 3V PCI X slots When incorporated into the 5013C MT server system one 64 bit 66 MHz PCI X slot is available with the use of a riser card which supports one full height full length PCI card Ethernet Ports The E7210 includes an on chip Gb Ethernet controller and the P4SCT has an additional Gb Ethernet controller to support a total of two Gigabit LAN ports 1 3 SUPERSERVER 5013C MT User s Manual Onboard Controllers Ports An onboard IDE controller supports one floppy drive and up to four Ultra ATA 100 hard drives or ATAPI devices Onboard I O backpanel ports include one serial COM port one parallel port four USB ports PS 2 mouse and keyboard ports and two GLAN RJ45 ports Other Features Other onboard features that promote system health include eight voltage moni tors a chassis intrusion header auto switching voltage regulators chassis and CPU overheat sensors virus protection and BIOS rescue
68. rface features The settings are Enabled or Disabled ACPI Suspend Type If enabled the option allows the user to determine the ACPI Suspend type The options are S1 POS S3 STR and S1 amp S3 APIC Mode This setting allows you to Enable or Disable APIC APIC is used to assign interrupt signals to a specific processor on multi processor system and provides IRQs beyond the conventional 16 under Windows 2000 or XP It has no effect on single processor systems MPS Version Control This setting allows you to state the MPS version for your operating system Options are 1 1 and 1 4 PWRON After PWR Fail This setting allows the user to specify how the system will respond when power is reapplied after the system has gone down due to a power failure The options are Off On and Former Sts Former Status 7 4 2 Advanced Chipset Control Access the submenu to make changes to the following settings ECC Config SUPERSERVER 5013C MT User s Manual ECC Configuration This setting allows you to enable or disable ECC Error Correction and Checking The options are ECC and Non ECC CSA LAN Giga LAN Select Enabled to activate the function of CSA LAN The options are Enabled and Disabled Smart Fan Control Select Enabled to enable the function of Smart Fan Control The options are Disabled and Enabled SATA Mode This setting allows you to set the SATA Mode RAID via BIOS The optio
69. s You should see the following display Reet LIU 12 Core Reset Configuration Data Enabling this setting resets the extended system configuration data when you exit setup Do this when you have installed a new add on and the system reconfiguration has caused such a serious conflict that the OS cannot reboot the system The options are Enabled and Disabled SUPERSERVER 5013C MT User s Manual Resources Controlled By This setting allows BIOS to automatically configure all boot and Plug and Play compatible devices If you choose Auto you cannot select the IRQ DMA and memory base address fields because BIOS automatically assigns them The options are Auto lt ESCDs and Manual Onboard CSA LAN Boot Select Enabled to enable the Boot ROM embedded in the Onboard CSA LAN Chip The options are Enabled and Disabled 7 4 5 Console Redirection Choose Console Redirection from the Award BIOS main menu with the Left Right arrow keys You should see the following display Console Redirection Select Enabled to redirect Console via COM Port Select Disabled to redirect Console when the keyboard is absent The options are Enabled and Disabled Agent Connect Via This feature allows the user to set the connection mode for Console Redirection When Null is entered Console Redirection will be set to direct connection Agent Wait Time This feature allows the user to set the timeout for the connecti
70. se JPUSB1 to enable or disable USB Wake Up which allows you to wakeup the system by de pressing a key on the keyboard or by clicking the mouse when either is connected to the USB1 or USB2 port Enable the jumper to allow the system to be woken up from an S1 or S3 state in Windows OS See the table on the right for jumper settings This feature works with the USB1 and USB2 ports only Watch Dog Enable Disable JP8 enables controls the Watch Dog function a system monitor that takes action when a software application freezes the system Pins 1 2 will have WD reset the system if a program freezes Pins 2 3 will generate a non maskable interrupt for the program that has frozen See the table on the right for jumper settings Watch Dog must also be enabled in BIOS Speaker Jumper The speaker jumper is located on J18 and allows you to choose be tween using the internal or exter nal speakers For the internal speaker jump pins 3 and 4 To use an external speaker place the speaker cable s header on all four pins See the table on the right 5 18 USB Wake Up Jumper Settings JPUSB1 Jumper Position Definition 1 2 Disabled 2 3 Enabled Watch Dog Jumper Settings JP8 Jumper Position Definition Pins 1 2 WD to Reset Pins 2 3 WD to NMI Open Disabled Note when Watch Dog is enabled the user must write their own application software to disable the Watch Dog Timer
71. ss SuperMicro Taiwan D5 4F No 16 Chien Ba Road Chung Ho 235 Taipei Hsien Taiwan R O C Tel 886 2 8226 3990 Fax 886 2 8226 3991 Web Site www supermicro com tw Technical Support Email support supermicro com tw Tel 886 2 8228 1366 ext 132 or 139 1 7 SUPERSERVER 5013C MT User s Manual Notes Chapter 2 Server Installation Chapter 2 Server Installation 2 1 Overview This chapter provides a quick setup checklist to get your SuperServer 5013C MT up and running Following the steps in the order given should enable you to have the system operational within a minimal amount of time This quick setup assumes that your 5013C MT system has come to you with the processor and memory preinstalled If your system is not already fully integrated with a moth erboard processor system memory etc please turn to the chapter or section noted in each step for details on installing specific components 2 2 Unpacking the SuperServer 5013C MT You should inspect the box the SuperServer 5013C MT was shipped in and note if itwas damaged in any way If the server itself shows damage you should file a damage claim with the carrier who delivered it Decide on a suitable location for the rack unit that will hold the SuperServer 5013C MT It should be situated in a clean dust free area that is well ventilated Avoid areas where heat electrical noise and electromagnetic fields are gener ated You will also need it placed
72. sts the POST Power On Self Testing Codes for the Award BIOS POST hex Description CFh Test CMOS R W functionality COh Early chipset initialization Disable shadow RAM Disable L2 cache socket 7 or below Program basic chipset registers Clh Detect memory Auto detection of DRAM size type and ECC Auto detection of L2 cache socket 7 or below C3h Expand compressed BIOS code to DRAM C5h Call chipset hook to copy BIOS back to E000 amp F000 shadow RAM Ohl Expand the Xgroup codes locating in physical address 1000 0 02h Reserved 03h Initial Superio Early Init switch 04h Reserved 05h 1 Blank out screen 2 Clear CMOS error flag 06h Reserved 07h 1 Clear 8042 interface 2 Initialize 8042 self test 08h 1 Test special keyboard controller for Winbond 977 series Super I O chips 2 Enable keyboard interface 09h Reserved OAh Disable PS 2 mouse interface optional Auto detect ports for keyboard amp mouse followed by a port amp interface swap optional Reset keyboard for Winbond 977 series Super I O chips OBh Reserved OCh Reserved ODh Reserved OEh Test F000h segment shadow to see whether it is R W able or not If test fails keep beeping the speaker B 1 SUPERSERVER 5013C MT User s Manual POST hex Description OFh Reserved 10h Auto d
73. t the system f Insert a Microsoft Windows OS Setup CD in the CD Driver and the system will start to boot up from the CD g Press the lt F6 gt key when the message Press F6 if you need to install a third party SCSI or RAID driver displays h When the Windows OS Setup screen appears press S to specify additional device s i Insert the driver diskette named Adaptec Embedded Serial ATA Raid Control ler Driver into drive A and press the lt Enter gt key j Choose Adaptec Embedded Host Serial ATA Raid Controller from the list indicated in the Windows OS Setup Screen and press the lt Enter gt key k Press the lt Enter gt key to continue the installation process If you need to specify any additional devices to be installed do so at this time Once all devices are specified press the lt Enter gt key to continue with the installation From the Windows OS Setup screen press the lt Enter gt key The OS Setup will automatically load all device files and then continue the Windows OS instal lation m After the Windows OS Installation is completed the system will automatically reboot SUPERSERVER 5013C MT User s Manual C 3 Other Software Programs and Drivers After you ve installed Windows Operating System the screen shown below will appear You are now ready to install the additional software programs and drivers included on the CD To install these software programs and drivers click the icons to
74. tal object before removing any board from its anti static bag Handle a board by its edges only do not touch its components periph eral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the motherboard add on cards and peripherals back into their anti static bags when not in use For grounding purposes make sure your computer chassis provides ex cellent conductivity between the power supply the case the mounting fasteners and the motherboard Unpacking The motherboard is shipped in antistatic packaging to avoid static damage When unpacking the board make sure the person handling it is static pro tected SUPERSERVER 5013C MT User s Manual Figure 6 1 Chassis Front View LILILILILI ase ote umane ES Sali o Jo lat 1L 1L L 28283 00 ol ol ol x 2 s Sg L1 Suma L1 Sua T 1 om T T Figure 6 2 Chassis Rear View ee riacaagaag A ei eo z E in e o9 200090 555 8 c
75. that they do not block the airflow through the chassis See the motherboard layout diagram for the location of the cable connections Serial ATA Backplane The Serial ATA drives plug into a backplane that provides power drive ID and bus termination A RAID controller can be used with the backplane to provide data security The operating system you use must have RAID support to enable the hot swap capability of the Serial ATA drives The backplane is already preconfigured so there are no jumpers or switches present on it SUPERSERVER 5013C MT User s Manual CD ROM Drive Installation The top cover of the chassis must be opened to gain full access to the CD ROM drive bay The 5013C MT accomodates only slim CD ROM drives Side mount ing brackets are needed to mount a slim CD ROM drive in the 5013C MT server You must power down the system before installing or removing a CD ROM drive First release the retention screws that secure the server unit to the rack Grasp the two handles on either side and pull the unit straight out until it locks you will hear a click Next depress the two buttons on the top of the chassis to release the top cover and at the same time push the cover away from you until it stops You can then lift the top cover from the chassis to gain full access to the inside of the server With the chassis cover removed unplug the power and data cables from the drive Then locate the locking tab at the rear of the
76. trical circuits or be pulled into a cooling fan Remove any jewelry or metal objects from your body which are excellent metal conductors that can create short circuits and harm you if they come into contact with printed circuit boards or areas where power is present After accessing the inside of the system close the system back up and secure it to the rack unit with the retention screws after ensuring that all connections have been made 4 2 Chapter 4 System Safety 4 3 ESD Precautions A Electrostatic discharge ESD is generated by two objects with different electrical charges coming into contact with each other An electrical discharge is created to neutralize this difference which can damage electronic components and printed circuit boards The following measures are generally sufficient to neutralize this difference before contact is made to protect your equipment from ESD Use a grounded wrist strap designed to prevent static discharge Keep all components and printed circuit boards PCBs in their antistatic bags until ready for use Touch a grounded metal object before removing the board from the antistatic bag Do not let components or PCBs come into contact with your clothing which may retain a charge even if you are wearing a wrist strap Handle a board by its edges only do not touch its components peripheral chips memory modules or contacts When handling chips or mod
77. ules avoid touching their pins Put the motherboard and peripherals back into their antistatic bags when not in use For grounding purposes make sure your computer chassis provides excellent conductivity between the power supply the case the mounting fasteners and the motherboard 4 3 SUPERSERVER 5013C MT User s Manual 4 4 Operating Precautions A Care must be taken to assure that the chassis cover is in place when the 5013C MT is operating to assure proper cooling Out of warranty damage to the 5013C MT system can occur if this practice is not strictly followed Chapter 5 Advanced Motherboard Setup Chapter 5 Advanced Motherboard Setup This chapter covers the steps required to install the P4SCT motherboard into the SC813MT 300C chassis connect the data and power cables and install add on cards All motherboard jumpers and connections are also described A layout and quick reference chart are included in this chapter for your reference Remember to completely close the chassis when you have finished working with the motherboard to better cool and protect the system 5 1 Handling the P4SCT Motherboard Electric static discharge ESD can damage electronic components To prevent damage to any printed circuit boards PCBs it is important to handle them very carefully see previous chapter To prevent the P4SCT motherboard from bending keep one hand under the center of the board to support it w
78. y 4 1 Electrical Safety Precautions A Basic electrical safety precautions should be followed to protect yourself from harm and the SuperServer 5013C MT from damage Be aware of the locations of the power on off switch on the chassis as well as the room s emergency power off switch disconnection switch or electrical outlet If an electrical accident occurs you can then quickly remove power from the system Do not work alone when working with high voltage components Power should always be disconnected from the system when removing or installing main system components such as the motherboard memory modules and CD ROM drive When disconnecting power you should first power down the system with the operating system first and then unplug the power cords of all the power supply units in the system When working around exposed electrical circuits another person who is familiar with the power off controls should be nearby to switch off the power if necessary Use only one hand when working with powered on electrical equipment This is to avoid making a complete circuit which will cause electrical shock Use extreme caution when using metal tools which can easily damage any electrical components or circuit boards they come into contact with Do not use mats designed to decrease static electrical discharge as protection from electrical shock Instead use rubber mats that have been specifically designed as electrical insul
79. y possible overloading of circuits might have on overcurrent protection and power supply wiring Appropriate consideration of equipment nameplate ratings should be used when addressing this concern Reliable Ground A reliable ground must be maintained at all times To ensure this the rack itself should be grounded Particular attention should be given to power supply con nections other than the direct connections to the branch circuit i e the use of power strips etc 2 3 SUPERSERVER 5013C MT User s Manual 2 4 Installing the 5013C MT into a Rack This section provides information on installing the SuperServer 5013C MT into a rack unit If the system has already been mounted into a rack you can skip ahead to Sections 2 5 and 2 6 There are a variety of rack units on the market which may mean the assembly procedure will differ slightly The following is a guideline for installing the unit into a rack with the rack rails provided with the System You should also refer to the installation instructions that came with the rack unit you are using Identifying the Sections of the Rack Rails You may have received rack rail hardware with the SuperServer 5013C MT Two front inner rails should already be attached to the chassis This hardware consists of two rear inner rails that secure to the chassis one on each side just behind the preinstalled front inner rails Note that these two rails are left right specific Installing the Re

SuperMicro SuperServer 5013MT (5013C-MT)

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