Samara Manual
Contents
1. Figure 2 The Creation Modification interface the only difference between the two is that the first does not have a defined ID yet but every field is set to default values 8 The Various Data Input Modification Interfaces The data Input interfaces compose the bulk of SAMARA these are mainly divided into 3 tabs indicating which data classification the fields belong to Initial Conditions Observed Data and Climatic Data These tabs have their own tabs too which present further sub grouping SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS Plot and soil Climatic zone Cultures Cultural practices Jd StacklniSurf 5tackI niPraf mm E paigseurS urf mm E Hef idT ypeS al Nm Antsirabe Antsirabe 800 Antsirabe Linzana 1100 YDA El LaLibertad LaLibertad 1200 Ndiaye 25 ableus 25 ableus 1100 Sableux Ndiaye 150 Ndiaye Palmira 1200 Palmira Palmiral Palmira 1200 Palmira E emn RiceD emo DO 01205 Santa Rosa Santa Rosa B00 Sableus Sotuba 1400 0205 d SeuilFiuiss mm PourcRuiss 2 HumPF m3 m3 HumFC m3 m3 at m3 m3 PE vap Coeff PercolationMax mm 20 30 0 3 0 2 5 Antsirabe 1 LaLibertad 20 30 0 3 0 2 5 1 20 3n 0 22 0 2 3 1 20 3n 0 3 0 2 B 1 20 10 0 18 0 2 10 1 20 10 0 18 0 2 10 1 Figure 3 The Initial Conditions interface this includes parameters concerning soil climatic zones and cultu2. Technical Manage AAA Arismabe Cinzana Labiberted MIRS sbleux 77697 CAT P RiceDemo RicelRRilGtrop RiceUPLtemp Segou Dnzan a ML 5 MLS 0 ML_Sotuba ML Zandels Choice of evapolransprabon Etplmp Dorm es personnelles FiceDemo RicelRRndiyeCS RicelRRindiayeHS RicelRRndiayewS RiceUPLAntsnab sol ba Delete Launch The error can be pointed out specifically in the simulation dates segment where the format which should be dd mm is instead displayed as another format Ndiaye Pala a Model Samma v1 SARRAHMI2 Sana Sarah Folder Risocas v RiceUPLImo n aye 0 d _ Observed data optionnel Simdation dates 2 2 SeStressFIoF 2 VN SFTME No Yea of the ending lect simulation Begnning of the cule pesod format dd mm Bemal Test Cancel Check the pou wan gt teen the inl icy name Yes of the begrring amuaton RiceUPLStaRosa SorghumCinzana 2010 lomat 2010 formal End the cube period Pomat dd mm Validate Bemal T est Pas de forage de param ines Figure 13 Simulation Setup Window Simulation dates fear of the beginning first simulation Tear of the ending last simulatian 2010 2010 Format wy Format pyy Beginning of the culture period T f
3. Creation of a Simulation Setup a Hit the button located at the lower left corner of the simulation interface b The interface should show six check boxes with bold headers these are the six components of a simulation scenario shown beforehand Select which entry you wish to use for at least 5 of the 6 components in case you don t have any observed data to use with the simulation wab 53 H P Hiceliema HicellPLtemp RHicellPLtrap zarghum COL BADADA Antsirabe Cinzana LaLibertad Milz 5 ableux ML Segou Linzan ML ML Sarobasso Satuba ML_ andiela ndiaye Ouagadougou Aer Palmiral Observed data optionnal Simulation dates Init Samara Y SBE TMFZ geStressFloFZ Qqzl5ETMFE Ha ld Sarah 32 Sarah 32T est Ws Folder Cat na eee DUR Hsc o gene e XO AC rne Tear of the beginning first simulation Y ear of the ending last simulation Beginning af the culture period Format dd mrn Cancel Validate Technical Manage Choice of evapatranspiratian EE Donn es personnelles ArceD emo AicelRAndiayels AicelRAndiayeH S 5 HicellPLAntsirab Rice IPLSraHosa 5orghumLinzana 1201 format 1201 format End the culture period i Format dd rm c Fill in the rest of the fields concern
4. CoettLeatDeath CoettLearyLA atio CoetfPanicleM ass Co ffPansinkPop CoetfResCapacity nternode D EVestr Escess ssimT of oot Feuil amp eroB ase Feuil amp eroPente HaunCrtTillenng Ic Tillering IntermadeLengthM as ter nld CULTURES Annuler To add highlighted rows simply press and hold down CTRL then press the LEFT MOUSE BUTTON if you wish to show all columns simply check the checkbox 15 Page HOW TOs 16 How to create and execute a simulation scenario Creation and execution of a new simulation scenario has two phases Phase 1 Create New Scenario A simulation scenario has 6 components Piot Initial conditions gt Plotand Soil site Initial conditions gt Climatic Zone Technical Management Observed data Varnety wab 7537 a H P Hiceliemoa HicellPLtemp RHicellPLtrap sarghumLCLL Antsirabe Cinzana LaLibertad Milz 5 ableux Ndiaye ML Segou Linzan ML Sikassa Sarobasso Satuba ML Zandiela ndiaye Ouagadougou Aer Palmiral Init Samara Y Observed data optionnal Simulation dates SBE TMF SbPluieF z gBStressFloF Z Qqzl5ETMFE Ha ld 32 Sarah dTest Wl 1 Folder Hisacas Cat na ev ene LOU Hunc o ee a XO ae rame Tear of the beginning firs
5. Figure 4 the Observed Data Interface SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS Continent amp m rique Cour Colombie Changer of station Palmira Filtering the yl Rainfall D Selected station ame _ CodeStation Jour Pluie mm o mar mre re ag io neo pe tees ET MJ m 2010 01 01 2010 01 02 2010 01 05 2010 01 04 2010 01 05 2010 01 06 2010 01 07 2010 01 08 2010 01 09 2010 01 10 2010 01 11 2010 01 12 2010 01 13 2010 01 14 2010 01 15 2010 01 16 2010 01 17 2010 01 15 2010 01 13 2010 01 20 2010 01 21 2010 01 22 2010 01 23 2010 01 24 2010 01 25 2010 01 26 2010 01 27 2010 01 28 2010 01 29 11 ETo for cs 0 01 01 2010 01 02 2010 01 03 2010 01 04 2010 01 05 2010 01 06 2010 01 07 2010 01 08 2010 01 09 2010 01 10 2010 01 11 2010 01 12 2010 01 13 2010 01 14 2010 01 15 2010 01 16 2010 01 17 2010 01 15 2010 01 13 2010 01 20 2010 01 21 2010 01 22 2010 01 23 2010 01 24 2010 01 25 the meteorology the rainfall bath Passer en modification Chart Figure 5 the Climatic Data Interface wi The Results Interface SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS Filter Folder Izacas Bernal Test Fan 011085 011085 fan 012095 fant 0120395 fan 1012035 dry fan 102105 fan 1102105 dry
6. donn es T aille o ka S lecti le fichier e Click the button in this interface and select the file containing the data to be imported from your system again the default format is a tab delimited text file 40 f You should see a preview of the data ready to be imported inside the grid displayed in the interface 1 Connesian 2 Association 3 Execution Chom du fichier _ S lectionner le fichier R initialiser la source des donn es Colerlesdorn es D Projets Cirad HIDEV METELU SMereo SENE AL tet Valeur donn e absente 999 autre Faram trage S parateur D limiteur de texte Symbole d cimal liane d ent te 1 f tabulation f aucun D E ligne donn es 2 i EN autre autre e point Valeur donn e trace Visualization rapide f virquie Rafra chir 200 1 1 95607 Informations fichier i Mb de ligne Mom Meteo MADAGASCAR Taille 194 429 ks 41 02701 2009 23 3 03 01 2009 33 1 04 01 2009 30 3 0501 2009 30 2 06701 2009 23 8 07 01 2009 30 7 0670172009 31 3 09 01 22009 31 5 10 01 2009 30 3 1170172009 30 3 1270172009 30 4 13 01 2009 26 6 1 909 22 1 585548 1 381111 1 539351 1 4814814 1 620370 1 458333 1 585648 1 97916 1 505648 1 602407 2 1 7 g Now hit the
7. xml Microsoft Excel 5 0 95 Workbook xls CSV Comma delimited csv Formatted Text Space delimited prn Text Macintosh txt Text MS DOS txt CSV Macintosh csv CSV MS DOS csv DIF Data Interchange Format dif SYLK Symbolic Link slk Excel Add In xlam Excel 97 2003 Add In xla PDF pdf APS Document xps OpenDocument Spreadsheet ods c After clicking on the file should be saved as a tab delimited text file 34 Page To create a new station country or continent a At the Samara main interface open the Initial Conditions tab SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS b Click on Climatic Zone Plot and sail Climatic zone Cultures Cultural practices c Along the top of the window click on Direct management of stations country Direct management of stations count d Wait for the data administration window to appear B Gestion directe des donn es administratives Continent Pays Station EMG Continent CITUR Modification A Dans cette vous pouvez acc der directement aus donn es ique que administravives dans Attention vous avez un acces direct sur les donn es V rifiez bien la coh rence de votre saisie avant de changer Annuler Valider d enregistrement Ajouter Modifier Supprimer Pays Stations Burkina Faso 20
8. 10 21 06 10 06 07 10 21 07 10 05 08 10 20 08 10 04 08 10 19 09 10 Date DegresDuounBemnal Test DegresDu leur Bernal Test Figure 12 graph of a simulation result with chosen variable Jour and DegreesDuJour 30 Page is for viewing the results in tabular mode every output in the currently selected category is shown regardless of which parameters are chosen for X Y1 and Y2 NbJas d DegresDulaur DegresDulaurCor 9 Lai MasLai m m FT SW none B Bernal T est Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test lj Bernal Test Bernal Test Bernal Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test Bernal Test 31 Page 7 01 2010 02 01 2010 03 01 2010 04 01 2010 05 01 2010 06 01 2010 07 01 2010 08 01 2010 09 01 2010 10 01 2010 11 01 2010 12 01 2010 13 01 2010 14 01 2010 15 01 2010 16 01 2010 17 01 2010 18 01 2010 19 01 2010 20 01 2010 21 01 2010 22 01 2010 23 01 2010 24 01 2010 25 01 2010 26 01 2010 274 2010 28 01 2010 12 38 32167932168 12 4304135804135 12 5723021582 34 12 4716417310448 12 8340344881833 12 2b6241134 7581 77 12 526618 705036 13 0718487334358 12 3
9. 100 1400 Vsb205 c Make sure to provide a unique ID to each row you will add to avoid the key violation error this simply means that a duplicate ID has been found SarraH v3 2 19 Page To Delete Rows of Data from the Table Note These are general instructions to delete rows of data the same set of steps Will also work for all other tables that allow deletion of data a Select the row you want to delete ni 5ntuba 5ntuba 10 00 10 00 100 1400 205 4 S ntube 10 00 100 1000 b Then press CTRL and DELETE simultaneously on keyboard this should bring up a confirmation message Confirm c Once you press OK the selected row will be deleted please keep in mind that deletion of data is permanent 20 Page To Edit Data on the tables a Simply double click the cell on the table that you wish to edit b In case the table is non editable by default there usually are buttons in the interface dificat that will allow editing once you click them such as which toggles edit mode on or off 21 COMPONENT SPECIFIC INSTRUCTIONS Outlined in the previous pages are general steps to work with the components creation deletion editing of rows of data for a component however there are some parts of the system which are not yet fully intuitive for a new user we will outline some points that will be helpful in the creation deletion and modification of each specific componen
10. date checked as shown and clicking the button will run a test execution whether the data can be imported or not if there is conflict with values or date format in the file no actual data will be saved ATTENTION ATTENTION ATTENTION ATTENTION s agit d un test de mise Jour carla case Test de mise Jour ou d AJaut est coch e AUCUME DONNEE DANS DBEcosys l Once you confirm that the data can be imported simply uncheck the checkbox mentioned above and click again this time the data will be imported and saved to the database 44 m After importation of data has been done a window that prompts you to update FAO will appear You may choose from several available scopes according to the scope of the data you have imported Mise jour du bilan ETo d apr s FAO 56 Lancer la mise jour Sur toute la base de donn e Sur un pays Sur un continent Sur une station Continent Pays Station Ex cuter a mise jour Information de la progression Continent Reste Pays Reste Progression Pluvio Progression M t o 45 n After specifying the scope press and the update should begin Information de la progression Afrique Continent Hese5 IENEENEEE Burkina Faso Pays Hese5 IEBEEENE Ouagadougou a roport Station 9 P Reste 10 EBENE Progression Puvio OOO Pro
11. i appear ME Connexion 2 Association E Donn es de type C donn es pluviometriques C donn es m t orologiques donn es observ es donn es d irrigation donn es de forcage C donn es dETP tab on the top of the same window and a window should Veuillez s lectionner le de donn es importer ci dessus h Specify what data type you will enter and the station it falls under at the upper part of this interface ann es de type Continent donn es donn es donn es donn es donn es donn es 42 Page pluviametriques m t orologiques observ es d irrigation de for age d ETP Station Andranamanelatra i An association section will appear below this is where we will associate the header names we used in the files with the header names used by Samara just in case they differ say the file is in another language press after selecting the two header names which you choose to be associated Results will appear on the list to the right Votre fichier DBE cosys R sultat Cades tation Associer gt min lt gt TMin Troy lt gt T Mau lt lt Tout dissocier lt lt 43 Page j Once done select the tab and a window like the one below should appear R sultats de l importation Options d importation 2 Tester avant de mettre jour au d ajouter Importation k Leaving the 2 Tester avant de metne
12. in the second matrix on right hand side of the window you can enter the weather station code name latitude longitude and altitude in the similar way Stations 200099 Bobo Dioulasso 11 200107 11 200054 Dedougnu 125 200029 DI Sourou 13 200026 14 200099 Fada M Gourma 12 200098 Agra t 200140 10 200001 Ouagadougou a roport 12 200035 Duiahigouwa E Suppression des donn es climatiques Supprimer la station 37 To Import Data Note These are general instructions to import sets of data the same set of steps Will also work for all other data types as long as they are in the proper file format for this example we will import plot and soil data The following steps explain the processes of importing climatic data into SAMARA data base We will detail the manual steps in importing data below header names used for files to be used in manual importation need not be exactly like the header names in SAMARA as there will be a step in the procedure which will take care of the association a Hit the button on the very corner at the top left of the main interface b Select manual data importation Automatic data importation Manual data importation Variables management Tables compaction Mettoyage Table Empty the results tables Request Regenerate the calculated ETo Countries and stations management Exit 38 Page c Wait for a new window to
13. 0099 Bobo Dioulasso 11 Madagascar 200107 Berama 11 200054 Dedougou 145 Niger 200029 DI Sourou 13 R union 200026 14 S n gal 200084 M Gourma 12 2000498 Farako Ba Agra i 200140 Gaoua 10 200001 Ouagadougou a roport 12 200035 Duahigeuva 1 F Supprimer le pays Suppression des donn es climatiques Supprimer la station 35 e Now you can choose add modify or delete a continent from the list click on type the desired name of the continent the name field then click velie Your new continent is now saved to the database L antinent Modification I Dans cette fen tre vous pouvez acc der directement aus donn es I administravives saisies dans DBEcosys Afrique 7 Attention vous avez un acc s direct sur les donn es V rifiez bien la coh rence de votre saisie avant de changer Mom Annuler Valider d enregistrement Ajouter Modifier Supprimer f Now specify country for weather station location If you don t see the country of your weather station location go to the end of the matrix hit the down arrow on the keyboard and you should be able to enter country code and name please refer to the section named To create new plot and soil characteristics for the detailed procedure Burkina Faso Madagascar Niger R union S n gal F Supprimer le pays 36 Page g Once you enter the country code and name then
14. 7 46266656716 13 3648351548352 13 2792 792792 793 13 3086363636364 12 8354545454545 12 9090551181102 12 53 12 775 13 1154 13 1558 702230075 13 29203539823 1 13 3534515384515 l3l272727272727 13 00 733656079365 12 693661 6438356 12 9 23529411765 12 8723531835 35 13 0138332857143 12 155487804878 12 3832157832158 12 4304135804135 12 5723021582734 12 471641 7910448 12 8340344881833 1225241134 758177 12 526618 05036 13 0718487334358 12 37 45258555715 13 364835 548352 13 2732 32732733 13 3086 3653636364 12 8354545454545 12 8090551181102 12 53 12 775 13 1154 1315587022300 75 13 2320353382301 13 95 3461 5394615 134272727272727 z873737373737 13 007 33550 73355 12 5835515438355 129123529411 765 12 8723531835 35 13 0138332857143 12 155487804878 Co co co co co co oc co GOG O AAAG c ojojojojcjojojojojojojojojjoijojojocojojojcjojojojojloizco is for importing data from the tabulated results into a tab delimited text file IN DATA IMPORTATION 32 Page To create a tab delimited file from MSExcel The excel file may be delimited by several symbols but it is recommended to use tabulations for the purpose of uniformity Below is how to save an excel file into a tab delimited text file Note Samara can use non tab delimited files files delimited by space colon etc but for uniformity we will use the tab
15. Hisocas E R sultats journaliers True True Agronomic results short True True Plant status bv phase True True IdMadele IdParcelle IdltineraireTechnique dDObsParcelle ldNextSimule Samara vz Palmira Palmira sorghumL sweet SonghumPalmira 311011085 3101 2095 tan 012095 dry 571102105 1102105 drm 371109085 fan 203095 fan 203095 dry fan 405095 fan 405095 dry fan 510095 fant 51 0095 dry tan 706105 fan 06105 dry fan 901045 fan 904105 tand 9041 05 dry fan 008095 fan 008095 dry MadaCHGDHAN D1 M adaCHGDHAN D M adaCHGDHAN D3 MadaCHGDHAN D4 MadaF161 D1 MadaF151 D2 161 03 161 04 Ndiaye 100708 5108 Ndiaye 100708 51080A Ndiaye 110509 5108 Ndiaye 110509 5108D R Ndiaye 111108 5108 Ndiaye 111108 S108DR Y Create Modif Delete Launch 7 Page El Samara YZ Samara 2 Samara YA D Samara vz Samara vz E Samara vz Samara vz E Samara YZ Samara YZ Samara YZ Samara YA Samara YA Samara 2 Samara vz Samara vz Samara vz Samara YZ Samara YZ Samara YA Samara YA Samara vz a Samara vz Bernal Test Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Fanaye Antsirabe Antsirabe Antsirabe Ndiaye Ndiaye Ndiaye Ndiaye Ndiaye Ndiaye Ndia
16. Madele IdParcelle IditineraireT echnique dDObsParcelle IdNestSimule a 4 Samara 2 Palmira Palmira sorghumLloLeweet SorghumPalmira El Samara vz Fanaye Ndiaye AicelAAl trop fan 101 108 1011085 Samara 2 Fanaye Ndiaye RicelRRIGtrop fan 07 209 fan 01 2095 Samara 2 Fanaye Ndiaye RicelRRIGtrop 07 209dry fan 012095 dry Samara ve Fanaye Ndiaye RicelRRIltrop 37110210 871102105 4 F Plot Site Variety Technical Manage a Choice of evapatranspiration RicelAAndiayels HicelFFindiayeHS Etplmp D onn es personnelles RicelRAndiape S RiceUPL rntsrab Hicel IPLSraHosa SorghumCinzana H wab 753 a H P ema AicelRAlGtrop HicellPLtemp HicellPLtroap zorghumC OL ML ML Sikasso ML Sotuba ML_ andiela ndiaye Ouagadougou Aer Antsirabe Cinzana LaLibertad ableus Ndiaye Falmiral a Model Observed data Simulation dates aptionnal MN P omar A Year of the beginning first simulation 201 format uw CAPE AM KAT Tear af the ending last simulation 201 Format yyy Sarahi se 32 est e Beginning of the culture period End the culture period format dd mm E 9 format dd mm Folder ld Bernal Test Cancel Validate Ce Ge ev aieo DON ANA eS f hE RE mee Bernal T est de forcage de param tres
17. SAMARA V2 USER MANUAL TABLE OF CONTENTS INTERFACES Main interface Simulation creation Interface Data input interface Results interface UTILITIES Utility buttons HOW TOs 00 O 12 13 14 16 How to create components for a simulation scenario 17 Accessing component tables Creating a new entry on each component s table Deletion of entries on a component table Editing data on component tables COMPONENT SPECIFIC INSTRUCTIONS Plot and soil Climatic zone Cultures Cultural practices 4 18 19 20 21 22 22 23 24 25 CREATION AND EXECUTION OF A SIMULATION SETUP How to create a new simulation setup How to run a simulation Choosing variables Graphing the results DATA IMPORTATION Creating a tab delimited file from MSExcel Creation of a new station country or continent Importing data into existing stations DATE FORMAT CORRECTION Determining an erroneous data format Correcting the date format 5 26 26 27 29 30 32 33 35 38 47 48 50 INTERFACE 6 The Main Interface SarraH v3 2 Tools Ba Models Configuration SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS Creation and realization Sensitivity analysis Optimization date modification 3 Modify Delete Simulations Esport Simulation Plat Site Falder Bisocas Dossier 1
18. ace these are the utility buttons detailed below are the functions of each is for exporting currently displayed table a popup window specifying the ID of which rows to import will appear by default all rows are to be imported idis FExport ItineraireT echnique ndiaye 0809 1 0809C ndiave RiceD rno AicelRAnidiayels AicelRAnidiayeH S HicelFiBindiaue vs Hicel IPLAntsirab Hicel IPLStaHosa SaorghumCinzana Sorghum almira Sorghums atuba W Tout s lectionner after clicking on Exporter another window prompting for a filename prefixed with the data type will appear clicking ok will export the data into the specified file Confirm Quel identifiant souhaitez vous pour votre fichier exporter 10 max ItineraireTechnique test txt 14 Ep b is for duplicating a highlighted row in the currently displayed table this includes all fields in the source row Take precaution in ensuring that a duplicated row will always have a unique ID assigned to it otherwise an error may appear C is used for choosing which columns will be shown on the currently displayed table clicking on it will bring up a popup window showing which columns are shown highlighted and which ones are hidden no highlights ASScstr Athenh itch 10 ass
19. an 4050Sdiy RicelRRilGtrop 17151003 RicelRRiGtrop fan151008dry RicelRRilGtrop 7170510 RicelRRiGtrop fan170610d y RicelRRilGtiop 121190109 RicelRRilGtrop 180130410 RicelARIGtrop fan130410dry RicelRRiGtrop fan200808 RicelRRiIGtrop fan 200909d y lModete pj Bemal Test fan1011085 fan1012095 fan1012035dy 171102105 171102105 dy 71103085 Tant 203035 fant 203095 dy Simulations Export Sirretation Plot Site Fanaye Samaa v2 fan 1011085 2 11012095 fan101209Sdy 171102105 17110210545 1571109085 1203095 fan1203095 dry 71405095 1571405095 6971510095 fan151008S dry 371705105 1717061054 1211901095 111904105 fan190410S dry 1312008095 fari200809S dry Sama v2 Samara v2 Fanaye Samara v2 Fanaye Samaa v2 Fanaye Samaa v2 Fanaye Samsa v2 Fanaye Samya v2 Fanaye Samara v2 Fanaye Samara v2 Fanaye lan 405035 dy 171510095 271510095 dy 271705105 fant 706105 dy 171901095 1571904105 271904105 dy 202009095 far 2009035 dy Samara v2 Fanaye Sem s v2 Fanaye Samsa v2 Fanaye Samara v2 Samara v2 Fanaye Fanaye Samaa v2 Fanaye Samaa v2 Fanaye Samya v2 Fanaye Samara v2 Fanaye Samara v2 Fanaye MadaCHGDHAN D1 MadsCHGDHAN D2 MadsCHGDHAN D3 Arisrabe Arist abe Artstabe Aritsrabe rkssebe Artstabe Samara v2 Samaa v2 Samsa v2 MadaReCHGDHAt Mada rtsD1 MadaReCHGDHA MadatrtsD2 MadsRieCHG DMA MadatrtsD3 Anis Chdo2 ArisChdD3 Plot Site Variety
20. appear this is the manual importation interface Importation de donn es climatiques irriqu es observ es et de for age v3 2 Fichier Aide 1 Connexion 2 Association 3 Execution Choix du fichier S lectionner le Fichier er la de Coller les donn es CT Param trage S parateur D limiteur de teste Symbole d cimal Valeur donn e absente H ligne d ent te f tabulation aucun virgule 999 7 C M ligne de donn es 2 C autre C autre pont autre Valeur donn e trace Visualisation rapide Informations fichier Mb de ligne Mb lign donn es 7 T aille kn Connexion 2 Association 3 Execution Note You can click on any tab among but it won t work unless you have previously done a previous step among the three 39 Page 1 Connexi m M d Select the tab a file importation interface should appear 1 Connexion 2 Association 3 Execution Chom du fichier S lectionner le fichier Coller les donn es CO Param trage S parateur D limiteur de teste Symbole d cimal Valeur donn e absente H ligne d ent te tabulation f aucun virgule g898 M ligne de donn es E E autre autre point autre Valeur donn e trace Visualisation rapide Informations fichier Mb de ligne Mb lign
21. ate and time formats Short date d M yy Long date dddd yyyy MMMM dd Short time Long time h mm ss tt What does the notation mean dd MMMM yyyy yyyy MM dd yy MM dd yyyy MM dd 8 Click on at the lower right corner of the window 9 Restart Samara for the changes to take effect 54 Page
22. delimited formatting a From the excel interface click on the upper left this will bring up a dropdown list select Save As then click on Other Formats here Prepare Send Publish Close Save a copy of the document 8 Excel Workbook Save the file as an Excel Workbook Excel Macro Enabled Workbook Save the workbook in the XML based and macro enabled file format Excel Binary Workbook Save the workbook in a binary file format optimized for fast loading and saving Excel 97 2003 Workbook Save a copy of the workbook that is fully compatible with Excel 97 2003 OpenDocument 5preadsheet Save the workbook in the Open Document Format PDF or XPS Publish a copy of the workbook as a PDF or XPS file button located at the very corner on the amp Excel Options 33 Page LEX Exit Excel b Afile selection window will pop up from here select the type of file you want to save it as in our case a tab delimited text file Excel Workbook xlsx Excel Macro Enabled Workbook xlsm Excel Binary Workbook xlsb Excel 97 2005 Workbook xls AML Data xml Single File Web Page mht mhtml Web Page htm html Excel Template xltx Excel Template Excel 97 2003 Template xlt Text Tab delimited txt Unicode Text txt XML Spreadsheet 2003
23. e top of the interface A window with a graph display to the right should appear SIMULATIONS INITI amp L CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS Filter Folder lisocas fan1012095 fan1012095 dry fan1102105 fan1102105 dry ni 203096 Simulation effectu e avec SarraH v3 2 Mod le Samara v2 http ecotrop cirad fr fan1203095 dry 4 nrnna J rier year 2010 20 gt 2010 R sultats journaliers NbJas NumPhase DegresDulour DegresDulourCor RUE ConversionE ff lc CulmsPerPlant CulmsPop CulmsPerHill GrainYieldPop DryMatStructLeafPop DryMatStructSheathPop Nombre chiffres apr s virgule DryMatStructRootPop DryMatStructintemodePol DryMatResInternodePop E DryMatStructPaniclePop Affichage Scientifique Type of charts C Point C Bar e C Line Area b m To the left of the window is the variables to be graphed section this is where you will choose which parameters to view on the graph to the right A dropdown box filters the outputs observed variables into different categories R sultats journaliers Donn es m t orologiques Donn es pluviam tnques Donn es observ es Donn es personnelles Donn es temp eteoralagie Donn es tempPluyiometne AgregqbiecadaireE vapBiam D B 28 Page d Select the variables which you want to view by clicking them from the list to the left and then pressing 2 to set the x axis and then _ 1 gt or 2 gt dep
24. ending on how you want to view the graph land _ removes a previously selected variable and removes all selected variables respectively Once all the variables of interest are selected we are ready to graph MumPhase Lai ConversionE ff lc CulmePerPlant CulmsPop CulmePerHill 9 Dry at amp tructLeafPop atStructS heathPop Nombre chiffres apr s virgule Cru ootPop tructintermodeFo DrutdatStructPaniclePop gt Affichage Scientifique 29 Page Mblas MumPhase egresDulaur L anversianE ff lc CulmePerPlant CulmePop CulmsPerHill Grainy teldPop Dom at amp tructLeafPop 5 5 heathPop ootPop Nombre chiffres apr s virgule CiruMatStructinternodePal CryMathesintermodePop atStructPaniclePap DruldatStructTatPap Affichage Scientifique To Graph the Results A group of four buttons can be found to the lower left of the results interface is for refreshing the graph and deleting what is currently graphed is for graphing the selected X and Y1 Y2 variables in the previous step Simulation effectu e avec SarraH v3 2 Mod le Samara v2 http ecotrop cirad fr 07 01 10 22 01 10 06 02 10 21 02 10 08 03 10 23 03 10 07 04 10 22 04 10 07 05 10 22 05 10 06 06
25. fri 20308 Simulation effectu e avec SarraH v3 2 Mod le Samara v2 http f ecotrop cirad fr fan 203095 dry oa mmm 1 FIET Y ear R sultats jaurnallerz YIS MumPhaze 1 1 1 1 1 1 1 1 1 1 1 EI a MumPhase E DegresDulaourCor z dj mee ee de FTSW Catr 2 Eta 72 lt ETR ES HUE ex ConversionE ff L ulmsP erPlant LulmsPop CulmsFerHill Grainr ieldPop Dru Dru atStructS heathPap ats tructhoatPop Nombre chiffres apr s virgule atS tructl nternadeP oy atRHeslIntermadePap DEN DrMatStrctTotPop Affichage Scientifique 06 06 10 21 06 10 06 07 10 24 07 10 050810 200810 04 09 10 of charts Date C Point Bar xe HumPhase Bemal Test Lai Bernal Test C Line Area meu True ST rsen eue Spem y S mod nm mmm EE EE perum L ile Lasssssssslkesselssss des ses ste ur IIS r C r T ED AS PNE Figure 6 The Results Interface showing a sample of the results done from the simulation run 12 UTILITIES 13 Page Utility Buttons Figure 7 the utility buttons L R Export Duplicate Row Toggle Display A group of three buttons are situated at the top left corner of the main interf
26. gression M t o FE o Once the processing is over close all windows except main interface Now go to main interface and hit the button CLIMATIC DATA on top you should find your imported data into database by selecting continent country and weather station location you created earlier 46 DATE FORMAT CORRECTION 47 Page How to spot an erroneous date format Some installations of Windows have the default date format set to something other than dd MM yyyy this can be observed when viewing the simulations setup window simulations gt creation and realization gt modify Toots Models Configuration Bal An SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS Creation and realizabon Senmiraty anaipns Optimization date modhcabon New 2 Mody Delete Folder R cuilals jouinabers Agronomic results short Plant status by phase Paria Ndaye Ndaye Ndaye Ndaye Ndiaye Ndaye Ndiaye Ndiaye Ndaye Ndiaye Ndaye Ndaye Id anete Idibnerae Techeique ldOObsPascelle IdNestSimde soeghumC UL sweet SorghumP simia RicelRRlGtrop fan101108 RicelARlGtrop fan101209 RicelRRiGtrop 7101209 9 RicelRRilGtop fa110210 RicelRRiGtop 1 110210 RicelRRilGtrop fan110908 RicelARIGtrop f2n120308 RicelRRiGtrop 7120309 RicelRRiIGtrop 7140503 RicelRRilGhop f
27. i 01 201 05 01 2010 ir 01 201 06 01 2010 i 01 201 07 01 2010 i 01 201 08 01 2010 i 01 201 09 01 2010 i 01 201 10 01 2010 i 01 201 11 01 2010 i 01 201 12 01 2010 i 01 201 13 01 2010 i 13 01 201 14 01 2010 i 14 01 201 15 01 2010 i 15 01 201 16 01 2010 i 16 01 201 17 01 2010 i 17 01 201 18 01 2010 almir 18 01 201 19 01 2010 i 19 01 201 20 01 2010 i 20 01 201 21 01 2010 i 21 01 201 22 01 2010 i 22 01 201 23 01 2010 ir 23 01 201 24 01 2010 i 24 01 201 25 01 2010 i 25 01 201 26 01 2010 i 26 01 201 27 01 2010 almi 01 201 28 01 2010 i 01 201 29 01 2010 i 01 201 30 01 2010 i 01 201 31 01 2010 i 01 201 01 02 2010 ir 02 201 02 02 2010 i 02 201 03 02 2010 i 02 201 04 02 2010 05 02 2010 ETo 06 02 2010 the meteorology the rainfall 07 02 2010 Passer en modification 0 37 0 88 1 04 0 67 0 88 1 17 0 76 0 31 0 81 0 56 0 58 0 63 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Figure 10 climatic data interface both rain and meteorology data are displayed Additionally a group of radio buttons can be found at the bottom of the interface right beside a large display box containing year numbers ETa far the meteorologie 2008 2009 2010 f the rainfall f both The display box on the right displays the available years for the data type indicated by the chosen fields in the radio button group t
28. ing the dates making sure that the formatting for the date in SAMARA and the windows system is in the dd MM yyyy format further discussed in the date format correction section of this manual Make sure the start and end dates of simulation comprise your experimental duration 26 Page d Choose which folder to save the simulation setup in then provide a unique ID for your simulation setup this ID will be the name of the entry that will be displayed on the simulations scenario list e Click on next to the ID entry field to save the settings attempting to exit the interface without choosing to save or cancel the changes will result in an error If no error appears your new simulation ID will now be an entry in the simulations list in the simulations interface Running A Simulation Now you are ready to simulate the provided conditions with your unique simulation scenario ID The steps below describe how to run a newly created scenario Launch a Choose your simulation ID and hit the button at the bottom of the simulation scenarios list a window should appear for a moment which indicates the simulation is being done Plateforme Ecotrop v3 2 0 0 Moteur Sans OLE 10 44 29 Simulation Bernal T est 00 00 01 Hum simulation 1 Simulation Bernal Test Ann e 2010 appen le srela 27 b Once the simulation is done you can view the results of simulation by clicking the i tab at th
29. ity User Accounts Review your computer s status Back up your computer Find and fix problems A Appearance and Personalization Change account type Change the theme Change desktop background Adjust screen resolution Network and Internet View network status and tasks Choose homegroup and sharing options Clock Language and Region Hardware and Sound Change keyboards or other input methods View devices and printers Change disp Clock Language and Region Add a device Change the date time and time zone Connect to a projector A Ease Of At for your computer the language to Adjust commonly used mobility settings Let Windowi use and the way numbers N Optimize vis currencies dates and times are Programs displayed Uninstall a program Get programs Figure 17 Control panel window containing various options 4 From the next menu that appears a menu like the one pictured below will appear click the Region and Language option from this menu trol Panel H i Control Panel Home Date and Time Set the time and date Changethetimezone Add clocks for different time zones System and Securi y Add the Clock gadget to the desktop Network and Internet Hardware and Sound Z Region and Language Install or uninstall display languages Change display language Change location Programs Change the date time or numberformat Change keyboards or other input methods User Accounts Appea
30. o the left The years are color coded RED for years with missing data GREEN for years with complete data GRAY for years without any data 23 Page c CULTURES By default all parameters used by SAMARA V2 are shown in the table to the right clicking on will filter the table into frequently used parameters clicking the button again will filter it into non frequently used parameters Additionally all parameters are divided into functional groups indicated by the color of the cells in each column The groupings are as follows Phenology and Photoperiodism r Light extinction and conversion EN Maintenance Respiration Water relations 1 Root growth DN caf properties EN Internode properties Panicle properties ES Tillering Seed properties 24 Page d CULTURAL PRACTICES The column named Ref Idlrrigation accepts entries coming from an irrigation list clicking Addaningation brings up the window where you can add edit or delete entries for irrigation Irrigation related to the technical management display all a rrigation mm Delete these irigations Figure 11 irrigation entries window 25 PHASE Il Create and execute new simulation scenario Following all the steps in PHASE you should have created new entries under each of the five components the 6 one is the model itself The following steps explain how to create and execute a new simulation scenario
31. ormat dd mm End the culture period ad format dad rmrm 48 Figure 14 Erroneous Simulation Dates format When we try to validate run SAMARA with such erroneous date formatting we will get an error like the one below and the interface will be unresponsive SarraH v3 2 when correctly formatted the display of figure 14 should be like so Simulation dates ear of the beginning first simulation 201 format Year of the ending last simulation 201 Format Beginning of the culture period End the culture period 1 Format dd mmi 304 9 Format dd mm 49 Page To correct the date formatting Note these steps are done using Windows 7 but shouldn t vary much across windows operating systems 1 Click on the start button in this case is a circle in the lower left corner with the windows logo Figure 15 The windows start button windows button as it appears in Windows 7 2 This will bring up the following popup select Control Panel from the popup selection that appears Pasco Richard IRRI Documents Pictures Music Computer Control Panel Change setti Devices and Printers Default Programs Help and Support Figure 16 Popup list with Control Panel Selected 50 Page 3 Another window will appear containing various options click the Clock Language and Region option here Adjust your computer s settings View by Category Y System and Secur
32. ral practices 9 Page SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS ETP data Observed data Saissisez dans cette fen tre les donn es observ es en rapport avec la simulation v aus pourrez ainsi comparer les r sultats simul s avec les r sultats observ s dans l outil Graphique en mettant en relation les donn es issues de la table donn es simul amp es avec ceus de la table ObsParcelle donn es observ es galsies ci dessous Display all the data Jd Hw ApexHeight BiomasseF euilles BiamasseT otale CulmsPerHill CulmsPerPlant Hecereed Use Du 8EPluieF2 B amp PluieF2 8 amp PluieF2 8 amp PluieF2 8 amp PluieF2 8 amp PluieF2 8 amp PluieF2 8 amp PluieF2 8 amp PluieF2 B amp PluieF2 8 amp PluieF2 8 amp PluieF2 10 1996 06 29 1336 07 13 1335 07 25 1996 08 01 1996 08 06 1996 08 00 1996 08 16 1996 08 22 1996 08 29 1996 09 05 1336 03 12 1336 03 13 1996 09 26 1996 10 03 1996 06 28 1336 07 13 1996 07 26 1336 08 01 1996 08 06 1996 08 08 1336 08 15 1996 08 22 1336 08 23 1996 09 05 1336 03 12 1336 03 13 0 0 71 42 345 48 1373 85 4037 53 5580 PoE 82 10291 98 10954 32 9634 52 0 0 83 35 383 51 1612 04 4006 17 5260 49 7433 54 8105 56 al 3 239 64 734 85 1696 57 1535 8 1558 18 1645 68 1457 1351 85 60 03 270 06 979 01 1538 83 1363 99 1305 56 1548 77
33. rance and Personalization Clock Language and Region Ease of Access 51 Page 5 Another window will appear this will contain the various format options for the date and time English Australia Date and time formats Short date Long date 0999 yyyy MMMM dd First day of week What does the notation mean Examples Short date 2013 03 05 Long date Tuesday 2013 March 05 Short time 3 56 PM Long time 3 56 14 PM Additional settings Go online to learn about changing languages and regional formats 52 Page 6 Click on the topmost dropdown box labeled Format from the various choices select English Australia this contains the format we want Engins nglish Australia English Belize English Canada English Caribbean English India English Ireland English Jamaica English Malaysia English New Zealand English Republic of the Philippines English Singapore English South Africa English Trinidad and Tobago English United Kingdom English United States English Zimbabwe Estonian Estonia Faroese Faroe Islands Filipino Philippines Finnish Finland French Belgium French Canada French France French Luxembourg French Monaco French Switzerland Frisian Netherlands Galician Galician Georgian Georgia German Austria 53 Page 7 from the dropdown box labelled Short date select the dd MM yyyy format D
34. se from in the simulation creation interface d m StocklniSurf mm StockiniProf mm EpaisseurSurf EpaisseurProf Ref idT ypeSol Antsirabe 800 Antsirabe Cinzana 1100 205 LaLibertad 1200 Ndiaye Mil2S ableux 1100 Sableux Ndiaye 150 Ndiaye Palmira 1200 Palmira Palmira 1200 Palmira RiceDemo 700 V D205 Santa Rosa 600 Sableux Sotuba 1400 VxD205 ja SeuilRuiss mm PourcRuiss Ru HumCR HumPF m3 m3 HumFC m3 m3 at m3 m3 PE vap Coeff PercolationM ax mmEdt 0 30 0 3 0 2 5 2 0 15 0 02 LaLibertad 0 15 0 05 0 15 0 05 0 15 0 05 0 15 0 02 0 15 0 02 18 Page To create new plot and soil characteristics Note These are general instructions to add rows of data the same set of steps Will also work for all other tables that accept additional entries a Go to end of the table click the bottom row like so 150 Ndiaye Palmira 1200 Palmira Palmira 1200 Palmira AiceDemo HiceD emo FOO 40206 Santa Santa Rosa BOO Sableux g 1400 40206 b And then press the down arrow on the keyboard a new blank row should appear this is where you will fill in the data according to the column names Ndiaye 10 00 10 00 100 150 Ndiaye Palmira 10 00 10 00 100 1200 Palmira Palmira 10 00 10 00 100 1200 Palmira 10 00 10 00 100 FOO 0205 Santa Rosa 10 00 10 00 100 BOO S ableus Sotuba 10 00 10 00
35. t simulation Tear of the ending last simulation Beginning of the culture period Format dd mrn Cancel Validate Technical Manage Choice of evapatranspiratian Donn es personnelles ArceD emo gt 5 AicelRAndiayeH S S HicellPLAntsirab RHiceLIPLSraRHosa 5orghumLinzana 1201 format yyy 1201 format End the culture period 129 Format dd rm Figure 8 Simulation creation interface While creating a simulation scenario you have different options to choose from among the existing entries which were previously saved under each component You can create a new entry with characteristics of your interest under each component This is important while creating a new simulation scenario for absolutely fresh conditions 17 Page The following general steps explain how to create a new entry under each component Note The same steps will work for entry into other components but for demo purposes we will use the Plot component 1 Hit the button labeled Initial Conditions near the top left of the interface SIMULATIONS INITIAL CONDITIONS OBSERVED DATA CLIMATIC DATA RESULTS 2 And then below click on Plot and Soil Plot and soil Climatic zone Cultures Cultural practices 3 You should see the following window appear below in the interface here you can see the previous entries from where you can choo
36. ts in the next few pages a PLOT AND SOIL There are two tables in the interface the top one displays the plot setup Table A and the bottom one gives the soil attributes Table B the Ref idTypeSol column in Table A contains values which can only be added edited or selected from Table B Ref id pes ol 20 30 gt Antsirabe LaLibertad 20 30 20 20 20 20 Figure 9 Left soil type table Table B Right Ref_idTypeSol from Plot setup table Table A 22 Page b CLIMATIC ZONE The interface for climatic zone only includes selection of rain and meteorology code stations plus the assignment of KPar value the creation of the code stations however Direct management of stations countr is not done here but in another interface entered by clicking please refer to To create a new station country or continent guide for further details the editing and deletion of specific rows of each code station is also done in another interface found under the CLIMATIC DATA tab both rain and meteorology data can be found here Continent Am rique Y Colombie v Changer of station Palmira Y Filtering the yl Rainfall Meteorology Selected station Palmira CodeStation Jow __ TMax C _ TMin C _ TMoy C _ HMax 2 HMin Ins theure dec Fig ETP imm 01 01 2010 01 01 201 31 5 17 2 235 35 33 71 0 81 21 02 01 2010 i 02 01 201 03 01 2010 i 03 01 201 04 01 2010 alm
37. ye Ndiaye Ndiaye Ndiaye Ndiaye Ndiaye Ndiaye Ndiaye Antsirabe Antsirabe Antsirabe de for age de param tres RHicelRRlGtrop RicelRRlGtrap RicelRRlGtrop tani 1108 fan 01209 01 2090 37110210 fan110210dr Fan 10908 fan 20304 tan 20309dry fan 40509 fani 40509dry 37151009 Fant 510090 Fan 0610 tant 061 Odry Fan 90109 Far 90410 tand 9041 Odry 37200809 2008090 M adaRizCHGDHAF Mada amp ntsD 1 MadaRizCHGDHAF Mada amp ntsD 2 M adaRizCHGDHAF Mada amp ntsD 3 Figure 1 The Main Interface 1011085 fan 01 2095 01 2095 dr 1102105 1021 05 dry fan 104085 fan 203095 fan 203095 dry fan 405095 fan 406095 dry fan 510095 fan 51 0095 dry fan 706105 fan 061 05 dry fan 901 095 fan 904105 fan 904105 dry 2008095 fan 008095 dry AntsChdD1 AntsChdD AntsChdD3 The Simulation Creation Modification Interface Doe JidRequete 4 Risocas R sultats journaliers True True Risocas Agronomic results short Tue True Redefine Risocas Plant status bu phase Tue True Id
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