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        User Manual - ProGroup Instrument Corp.
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1.                   e    A H  j  Enpty last rou to                e UFF  Liquid handling speed       e High  Change tips                                  _    Link files    ra       LINK TO FILE is used to indicate what the system should do after it completes the file it is currently  running     If you want the system to stop at the end of the file do not enter anything in the link file field     If you want the system to perform another file after the present file is complete  link to the desired file     CHANGE TIPS is used to indicate if the tips should be removed after the first liquid is dispensed and  a new set of tips from the tip magazine should be placed on the pipette head  thus decreasing    carryover     If you don t want to change tips  then the same tips will be used throughout the entire    operation     41    13 42 49 Serial Di lution    Actual Values  Screen 3 43  Fill plate   P   gt  D    EE Gm H  rus  00 eee    First Tip Rou          oH E mj    A B  Fill plate DB    POLLS    19 39 22       Above screen represents WellPro 24 channel  384 well plate     FILL PLATE ROWS TO DILUTE is used to indicate the rows of the plate are to be included in the  serial dilution  Rows are designated by letters A through P  back to front  for 384 well plates in the  24  across  configuration and 1 through 16 in the  16 across  configuration  Rows are designated by  letters A through H for 96 well plates in    12 across    configuration and 1 through 8 in the  8 across   configu
2.                ae   1 TU 1     Tanster Yo lume     4       58uL       sWe i    Def  Values Next  I  eb Hele  13 59 09 Plate to Plate chuil  A    Actual Values  Screen 344    Plate 1 type FLAT  Plate 7 tupe FLAT    Link files    9       Rst NAT and NAT is used to reset the next available tip row to be used in the tip rack  This will set  the tip tracking feature and will keep track of last tip row used     59    8 HOST CONTROL   CHERRY PICKING    6 1 Overview    Host Control is the process for sending commands from a computer into the serial port of the WellPro   This is also used for sending information from a computer such as excel spreadsheet data to the WellPro  for our cherry picker single channel nozzle  Refer to cherry picking manual for more information on the  operation of the single channel module     Hain Menu    Plate Serial Plate  Filling Dilution To Plate    Cherry        ess eere S SUPPORT       Pressing the Host Control button will open up the Host Control screen     Cherry Picking Program    status  OF  Head Pos  steps  Deck Pos    zteps  Tip Unl  BuL    Connect the PC using the Exit  ex Be Serial Portland run  err    I reo Picking of tudre        Host Control   Cherry Picking Screen allows for connection to a computer or other device via the serial  port  Head position  Deck position and Tip Volume can be programmed from software such as hyper  terminal   net and others  This function is used when the WellPro needs to be integrated into a larger  platform whi
3.      9    A H     Nix volume                                      53 uL  Plate type                         FLAT  Trof volume at start      e rrmmL  Liquid handling speed    e      Link file    8       PLATE ORIENTATION is used to indicate how the plate is positioned  The value that is selected  indicates the number of wells that will be under the pipette tips at one time   Important this must be  set at A H landscape at all times if you have a short bed WellPro  The short bed can only fill  plates in landscape but the long bed WellPro can fill in landscape and portrait orientation    A H for 96 well plate landscape orientation   1 12 for 96 well plate portrait orientation   A P for 384 well plate landscape orientation    1 24 for 384 portrait orientation    MIX VOLUME is used to specify the volume of the aspirate delivery cycles used to mix the contents of  the well after transfer     PLATE TYPE is used to indicate the design of the bottom of the plate  V shape  U shape  Flat   This  information is used to determine the height of the liquid in each well and thus calculate how far down    24    into the wells the tips should go  If you are not using a standard microplate  select custom one of the  ten custom programs  The custom programs for non standard plates are configured in the settings  configuration from the main menu  In the settings menu you can set the HEIGHT and determine the  amount to raise or lower the tip height  The height parameter can be set from 100 to 3500
4.     1  Aspirate sample from source plate     2  Deliver sample to receiver plate     3  Replace used tips with fresh ones and proceed to the next sample row  etc     7 2 Types of Plate to Plate Transfer    There are two general types of Plate to Plate Transfer   1  transfer any single row in one plate to any other single row in another plate   2  transfer any single row in one plate to two or more rows in another plate     The program allows you to specify the direction of the transfer  The default direction is from plate 2 to  plate 1  but the system also allows you to transfer from plate 1 to plate 2  so that either plate can be used  as the DESTINATION plate  As examples  you can transfer from row A of plate 1 to row B of plate 2 or  you can transfer from row A of plate 2 to rows A  B  and C of plate 1  This enables you to set up an assay  plate to do duplicates  triplicates  etc     At the main menu screen you have the option of selecting a process and creating a file with your  parameters and saving the file  Select the Plate to Plate button for changing plate transfer parameters     Hain Menu    Plate Serial Plate  Filling Dilution To Plate    Cherry  Pick ing    sett ings      2 Saree  S  RESTI saree qe       47    7 3 Creating and Editing a Plate to Plate Transfer File    Transferring an aliquot of sample from one plate to another is called  plate to plate  transfer or  replica  plating   This technique allows for transfer of samples in a SOURCE plate to a RECEIVER pl
5.     Air Gap   This feature moves the liquid head one extra position after each dispense  This feature helps  dispense all liquid that remains in the tip after each dispense  Factory settings should be acceptable  for most applications but may need to be changed depending on viscosity of fluid    A value of 20 steps for 24 channel head will result in approximately 1ul air gap  A value of 8 steps for  12 channel head will result in approximately 1ul air gap    The air volume should be sufficient to assist the separation of the droplet from the tip to the well bottom   but not so great that air bubbles become a problem  The air gap is parameter that is often optimized by  trial and error     Buzzer   Clicking on the Disable Enable button will toggle the buzzer to disable or enable  This will  enable or disable sound when you touch icons buttons on the touch screen     Backlight   This feature will put the touch screen in a sleep mode after not using for a specified  amount of minutes  Sleep mode will extend the life of the touch screen     Password   The password comes with a factory setting of 1234  The password can be changed to your  personal preference  After choosing a password you should document the password and store in a safe  place  The password is required to access the settings area of the software         Feature increases or decreases the contrast of the touch screen display     Battery   Tracks the battery life of the touch screen display  Optimizing Pipetting Per
6.    1 2   Principle of Operation    The ProGroup Instrument Corporation WellPro WP3000 Liquid Handler consists of a hand held touch  screen controller and a liquid handling unit  A variety of reagent containers can be used to hold liquids  that will be added to the wells in a plate  or have been removed from a plate      1 2 1 Touch Screen Controller    The ProGroup Instrument Corporation WellPro WP3000 Liquid Handler includes a touch screen display  that is used to program all operations of the unit  The controller allows the user to control parameters  such as the volumes to transfer  mix  or dispense  the transfer speed  and whether to change tips  between transfers     1 2 2 Liquid Handling Unit    The ProGroup Instrument Corporation WellPro WP3000 Liquid Handler is an electro mechanical transfer  unit that is comprised of two basic parts  a table and a vertical head assembly     The table accommodates a series of interchangeable templates for the short base unit and a single  template for the long base that position the reagent containers and a magazine with the disposable tips   etc  During operation  the table slides back and forth to bring the appropriate component under the head  assembly     The short base unit is several inches shorter so that it can fit inside a hood  The shorter base unit does  not have the plate filling in portrait mode feature like the long base due to the table space being shorter     The head assembly consists of three basic parts     e aplung
7.    Actual Values  Screen 3 4    Plate 1 type FLAT  Plate 7 tupe FLAT    Link files   9          EB Help          Above display for WellPro 12 channel  96 well plate     Plate to Plate Transfer B uL    Actual Values  Screen 344    Plate 1 type FLAT    Plate 2 type FLAT    Link file      19 39 02       Above display for WellPro 24 channel  384 well plate     ENTER FIRST TIP ROW is used to specify which row of tips to use  Rows of the tip magazine are  designated by letters A through P  back to front 24 channel head  or A through H  back to front for 12  channel head      SOURCE ROW is used to indicate which row of the SOURCE plate is used to withdraw samples  from  This parameter only appears if the  1 to SEVERAL  mode is selected in this file  In that  instance  the SOURCE row specified acts as the single source row for transfer to several receiving or  DESTINATION rows     First Tip Row NAT   Setting the next First Tip Row to NAT will keep track of next available tip that  has not been used  This should be set at NAT if you are linking programs or wanting to keep track of  next row of tips to be used while manual running programs  If you want to reset the next available tip  row to the beginning then at screen one press Rst NAT  See below     22    IE Ba Plate to Plate SuULA A    Actual Values     Plate 1 tupe  Plate 4 type    Link file        When you press Rst NAT located on screen one a Pop Up screen will be displayed asking to make  sure the deck is OK  If you press OK an
8.    Enter in a 1200 value and press enter  The liquid head will move down    Click on the plunger    Enter in a 1100 value and press enter  The liquid head will move up    Pick and place the trough so that the end of the pipette tip is submerged into the distilled  water    While the tip is submerged enter a value of 1000 in the Plunger setting and press enter  This  will aspirate 5ul of water    Next remove the trough and press the  25  negative arrow key  ONCE  Now take a fine tip felt  pin and carefully mark a line where the bottom of water line is located on the tip while still on  the nozzle    Now press  25 arrow once and then plus 25 arrow once  Perform this sequence 16 times  After  performing this operation the water line should be at the original position and at the felt tip  marked line  If it is below the line then the backlash setting needs to be reduced and if water  level is above the felt tip marked line then the backlash number needs to be increased   Continue this process until a backlash setting is found so that the water movement distance  level is repeatable     75    Tip Volume   Volume pipette tip being used  This will usually be 200ul for 96 well plate  12 channel  head  WellPro or 50ul for 284 well plate  24 channel head  WellPro     EJECT   This setting determines how far the tip ejection bar moves to eject tips  This setting should  never need adjusting  If tips are not ejecting from nozzle then please contact a ProGroup technician  for technical ass
9.    This User Manual also describes features and specifications of the WellPro Model 3000 Liquid Handler  hardware and on board software     This manual includes various options that may not be installed in your  instrument  If you desire to add these options  please contact ProGroup  Instrument Corporation or your local distributor for further information     WellPro User Manual 01 03 07 iv    TABLE OF CONTENTS    SAFETY SYMBOLS AND MARKINGS coi esee   is Ives desto oov ei ue a III  ABOUT THE USER MANUAL Jive Saas reti VES conte AA TIR AGGHAC dadas IV  SABEE OPIGONTENES 255 tai quate aee RA Lc eeu eed can D L LUE Oda V  T  ANTRODUCTION cui ios 1  1 1 OVER ata tido 1  12  HPRINCIPEE O OPERATION a 2  1 2 1 MOUCH Screen Controller a a e e a de ue 2  1 2 2 Liquid Handling Standard Base Unit              ooooooooocoooccoroccorccrnocconrcconocrooocconoccnons 2  1 2 3  WellPro Reagent ContainerS          sssesesseseecsscseesescesoesescsecsoeseecssceceseeceseecesoreeseee 4  1 2 4     WellPro Templates and configurations            sssessssessesoescesseseecesoeseecescsceseecesoeseseee 5   2  ANSTALLARION PROCEDURES  suas were dia eee 14  2 1 SSA O UM I T ML MC a MDC Ine Deon DE 14  2 2 LOCATION OF THE UNIT IN THE LABORATORY        cccccccccccccccccccccccccccceccccccceccscecceccecescescecesces 14  2 3 POWER REQUIREMENTS ci dida 15  2 4    U  NPACKING AND INSPECTION   454 cies Dno ster Peru veu E ke eto E UE E REO NEA E vo vw Rv edo better qe E CER 16  2 5 INITIAL INSTALLATION OF THE WE
10.   Press Rst  Volume and then Track and OK     After pressing Rst Vol   Track and OK the program takes you back to screen 1 of 3  When you press  GO to run the program you will then be prompted to enter volume in Trof    Enter Volume in Trof  New Volume  The software will now keep track of volume used  in the trof during operation and running various programs and linking of programs     LIQUID HANDLING SPEEDS is used to select the rate sample delivery from the tips  rapid  medium   or slow      LINK FILE is used to link and run a previously saved program immediately after current program  If  link file is left blank then system will run current program only  The area immediately to the right of link  file displays a number which represents a time delay between the link files if desired       Plate Filling eur X    Enter Mame  SD   Enter Delay Time  15  6 9999 sec       29 95 17       If you want the system to perform another file after the present file is complete  enter the desired file   name and time delay between programs if desired  Use the displayed keypad to enter the text of the  program to link with in the Enter Name field and select enter  Use the displayed keypad to enter the   seconds in the delay time field  When complete click on Exit    Now the Link File field should display the file you linked to and the specified time delay   Pause  Enter Delay Time  Instead of a time delay you also have the option to have a pop up screen prompt    you to press continue before
11.  8 1 OVERVIEW M P                                                        9  60   9  SETINGS CONTROLJ vuelos EerUr EedieoSe V  OUV dei ii 62  9 1 OVERVIEW cen a ERR ctor estas ecclesia kates shia MC REL MAL AR UM ADSL MALA DIOE 62     WellPro User Manual 01 03 07 V    10    ADJUSTING THE TIP HEIGHT sv oo NE AS NND PROF QUU MPEd seasons 70    10 1 OVERVIEW A a a E rM D Au UL MP ADD D DIAM DD US 70  10 1 1 Editing Running the Position Adjustment Me NU            cccceeccceccceecceeccceececeecceees 71   11 LINKING FILES m T                                                         78  11 1 OVERVIEW Soa ater eine PEINE DL OP A LI CON AM sae IL MALA ERI EDDA IRI 78  11 2 USING INKED  FILES td dd dd 79  12 OPERATING HINTS AND MAINTENANCE     occcccccccccccocococococononocnocnononcccocococononononononononons 80  12 1 OVERVIEW A A A LUAM Lr E A 80  PA A ca aucnd aan leeaecion enna suvatinnenac E Saeed eas edaecces od EERTE 80  12 3 POWER INTERRUPTIONS 255 vx rao uen Erde i ei tet hbri ie 80  12 4 MAINTENANCE sousteseetiitucvantetiet ue Eran tation gown d eere ind 80  12 4 1 Preventive Maintenalie6 cio tts ee a M eU caters eco d MR LC EE co ao Ue 80  12 4 2 Cleanine UP  PER             TTVTER 81  12 4 3 PISTON PUNTOS aia MERI Dad ita PD p erase usb ete ae ae Ru poit 81  12 4 4 Table  Rails o ero a a a A a e Ni  81  12 4 5 Cleaning the Plastic Cover   sd ax eed tan ntu O 81  12 4 6 Fuse Replacermelib sd ooo deos Sea RUIN VERE Edi PEORES ds 81  12 5 TROBBBESHOOTING  becsdst oerte n RNV EE 
12.  After clicking on text a pop up screen with numbers will be shown  Click on the numbers of  desired value and click on enter when finished     74    Calibrating Liquids    For liquids that require an accuracy adjustment during volume dispensing  you can determine the  calibration factor that adjusts to the specific gravity of the liquid  The Volumetric Calculation Settings  adjusts the movement of the piston motor to improve pipetting accuracy of specified liquids     WellPro is factory calibrated for distilled water at room temperature  however  you can add calibration  values to improve pipetting accuracy of liquids with specific gravity that is significantly different from water     Baie e  nd    en                mem  235     Backlash   A str    ir Gar   ste    Tie vol    Disable  Buzzer      Eject i A  tpP Back   iaht  B min    Offset    28 ste  Password  1234     aL steps  A stp      2   Contrast    Max vol   Aste   Battery   6 66 v    Home All  Bul s    Next  IR          This is the calibration screen for adjusting settings of pipetting accuracy  These settings should only be  changed by an authorized technician or designated quality control technician     Backlash   This setting will compensate for backlash effects resulting from mechanical components  To  set the backlash setting you must first place a pipette tip on a nozzle  Next fill a trough with distilled  water and aspirated 5ul  To aspirate 5ul perform the following     1     2     3     Click on the Plunger 
13.  Corporation shall not be liable for any damages whatsoever arising out of the use or  inability to use this product     Printed in the United States    SAFETY SYMBOLS AND MARKINGS    These symbols are intended to draw your attention to essential information and alert you to the presence    of hazards as indicated  Some of these symbols may not appear in the manual or on the product   SAFETY SYMBOLS used in the WellPro Model 3000 Liquid Handler    Power ON       Power OFF    O    WARNING MARKINGS used in the documentation    Caution  risk of electric shock     Caution  biohazard risk     Caution  risk of personal injury to the operator or a safety hazard to the  surrounding area     Caution  risk of damage to the instrument  other equipment or loss of  performance or function in a specific application      gt  gt  pD    WellPro User Manual 01 03 07    iii    ABOUT THE USER MANUAL    This User Manual has been written for the user  e g  laboratory technician  and provides information on  the WellPro Model 3000 Liquid Handler  This manual contains the installation and operating instructions  for the WellPro Model 3000 Liquid Handler  Read the manual in its entirety prior to operating the  instrument     This User Manual has been designed to give you the information you need to     e Review safety precautions    e Install the WellPro Model 3000 Liquid Handler    e Use the WellPro Model 3000 Liquid Handler in routine analyses and research   e Perform basic maintenance procedures  
14.  Liquid Handler is shipped in one carton that contains  the items listed in Table 2 1  When the system is received  carefully unpack the unit and verify receipt of  all components  We recommend that you save the shipping container and packing material in case you  need to move or ship the instrument     Table 2 1 PACKING LIST    Quantity Description Part Number   1 WellPro 96 Long base WP3000 96   1 WellPro 96 Long base w  Single Channel WP3000 96 CP   1 WellPro 96 short base WP3000 96S   1 WellPro 96 short base w   Single Channel WP3000 96S CP   1 WellPro 384 Long base WP3000 384   1 WellPro 384 Long base w   Single Channel WP3000 384 CP   1 WellPro 384 short base WP3000 384S   1 WellPro 384 short base w   Single Channel WP3000 384S CP  WellPro 3000 Operators Manual OM3000  Controller Touch Screen 8025  Plastic Cover Tinted 76090          I IL AY   Ll    Templates for Short Bed Instrument  Template for Long Bed Instrument    Micro Trough 4 per pack SAMPLE  Chilled Reservoir SAMPLE  Benchtop lonizer for the 384 Instrument only 4009885    If there is external damage to the shipping carton  report the damage to the shipping company and your  local ProGroup Instrument Corporation representative  lf internal parts are missing or damaged  report  this to the shipping company and your local ProGroup Instrument Corporation representative as soon as  the problem is observed     Note  If there is any apparent damage to the system  the user should investigate the nature    2 5    of th
15.  appropriate plates are in  position on the deck  Once you have confirmed then touch press the OK button     13 45 10 Serial Di lution       A OOOO OOOO  BDO ODO ICC IO  CODO OOO  DOO OOO OOOO  EO OOO OOO OOOO    pil  SE CITE OCTET    Status  Running       CO He  F      Above screen is for WellPro 12 channel  96 well plate        44    Serial Dilution SuL A    000000000 00000 0001010  000000000 00000 a a a  nogococonmnocgcoenmnogoongpogo  000000000 00000 a a a  000000000 00000 00000  000 000 O IO O IO IO  00 0000000 010000 a a a  000000000 00000 00017  00 0000000 000 000 0 ICO  OO0O0OR DIO IO ICO  000 000 DIO O IO IO  0000000500 00000 000017    ol  o  ol  ol  ol  ol  o  ol  ol  ol  o  a  ol  ol  ol  o       13 40 28 EH    Above screen is for WellPro 24 channel  384 well plate        The serial dilution will begin with a status screen showing the rows as they are being filled  Pressing  the STOP button while program is running will cause a pause in the program and pop up a program  paused message with option to abort or continue     13 45 41 Serial Di lution    E A UR HE EE  B    bort  amp  Return Tips       Pressing the STOP button while program is running will cause a pause in the program and pop up a  program paused message with option to abort  continue or abort and return tips    Pressing the Abort button will abort the program or pressing the continue button will continue with the  program  The abort and return tips option will return the tips to the rack and abort the p
16.  are  designated by letters A through P  back to front  or A through H  The program will start with first tip  row specified and if the change tips is YES it will go to change tip row  For example     The screen above will start with row P of tips and fill row A of well plate  It will then eject tips and pick  up row O of tips and then fill row B of well plate etc     If change tips is set to NO then program will use row P of tip rack to fill all the rows selected for well  plate     CHANGE TIPS is used to indicate if the tips should be removed after the first liquid is dispensed and  a new set of tips from the tip magazine should be placed on the pipette head  thus decreasing  carryover   f you don t want to change tips  then the same tips will be used throughout the entire  operation     Note  The above does not track tip rows used  If tip row tracking is needed for tasks such as linking    programs or if you need to keep track of last row used after running a program so you know where to  start with next available tip row then use the following setup below     28    Plate Filling Gaul Xx       Actual Values  Screen 343  A       O        EE E  Fill pliate E E ET Et Ed n n  E    2 K L H r4 CI F       rows           Change tips    So Back          12 18 01 Eu Hele    13 12 35 Plate Filling    Actual Values  Screen 3 3  Fill plate   P   D    E F G H   rus BEBE   First Tip Row             e nar Ea   BR    Change tips  TES       First Tip Row NAT   Setting the next First Tip Row
17.  e WellPro Reagent Troughs and Pipette Tips    3 2 WellPro WP3000 Touch Screen Controller    The WellPro WP3000 Controller includes a touch screen display which provides the operator with  complete control of all liquid handling operations  The basis of operation is via a user generated method  which includes a series of primary operations  The method can be stored and retrieved as desired     Each primary operations provides for user control of a given aspect of the operation  Typical operations  include the volumes to transfer  mix  or dispense  the transfer speed  and whether to change tips between  transfers     3 3 The WellPro WP3000 Liquid Handling Unit    The WellPro WP3000 Liquid Handling Unit is an electro mechanical transfer unit that includes a table and  a vertical head assembly  The table accommodates templates which position reagent containers  a  magazine with rows of disposable tips  etc  During operation  the table slides back and forth horizontally to  bring the appropriate workstation under the head     17    The standard head assembly consists of three basic parts     e A plunger housing which contains nozzles that press into the tips to form airtight seals   e A plunger block which moves up and down to aspirate and deliver samples    e Atip ejector plate which removes used tips  The head assembly slides up and down vertically to bring  the tips to the appropriate height to perform the designated operations      A single channel nozzle for cherry picking i
18.  first  row in the tip rack  Rst NAT is only active when NAT is selected on last screen in the First Tip Row  field     A  GO  button exists at the lower right hand corner of every screen  This can be pressed at anytime to  run the current program loaded into the system     13 29 07 Serial Di lution uL A    Source well volume  166 uLL0 2808        hs Description           This parameter determines Aow  much liquid is in the source well  before ang tranfer has made        Touch the number to change value   The value is anm integer etueen  C and 2eee uL           E      VOLUME IN SOURCE WELL AT START is used to tell the system how much volume is in the initial  source row           35    13 29 37 Serial Dilution GuLi A    Actual volume in vell  166uLL6 7666     hs Description  z        This parameter determines ho  much liquid is in eccl wel      ou  before  any tranfer has made         ee the number to change value     e value is am integer etueen  C and ze ul     EU    ACTUAL VOLUME IN WELL is used to tell the system how much diluent is in each well before any  transfer has been made  This parameter does not pertain to the first row  which contains the sample   The system uses this number to determine how far down into the wells the tips should go  and also to  prevent the instrument from attempting to withdraw more sample than is actually present  This    parameter can be set from 0 to 2000 LL in 1 uL increments  Verify the capacity of the plate type you  are using is greate
19.  from corrosion or salt accumulation  To ensure maximal safety and trouble   free operation  clean up spills immediately  Turn off and unplug the WellPro liquid handler before wiping  up spills    12 4 3 Piston Plungers  On a periodic basis  gently apply a light silicone grease to the piston plungers of the 12 or 24 channel  liquid head using a clean cloth or lint free towel  This will keep them sealing well and inhibit corrosion     12 4 4 Table Rails    The rails on which the WellPro table runs must be kept clean and free of foreign matter to ensure smooth  operation  Periodically clean these by wiping with a clean cloth  ALWAYS BE CERTAIN POWER IS  TURNED  OFF  BEFORE CLEANING THE TABLE RAILS     12 4 5 Cleaning the Plastic Cover    The plastic covers should be cleaned using a nonabrasive cleaner  and then rinsed with a soft clean  damp cloth     Decontamination may be performed by chemical means  Chlorine bleach is an acceptable  decontamination solution  Ethanol and gluteraldehyde should not be used on the plastic surfaces  DO  NOT AUTOCLAVE     12 4 6 Fuse Replacement    Turn the power switch off and disconnect the power cord from the power outlet before replacing the fuse   This procedure will insure against electrical shocks     For continued protection against electrical overload and fire hazard  replace the fuse only with one of the  same type and rating  3 amps  250V  Normal blow      12 5 Troubleshooting    If you encounter difficulties in the use of the instrumen
20.  in  increments of 1 or 25     13 0456 Plate Filling  uL              raf volume at start  TY mL    Current Wool ure   trof 2 mL  trof ecmL  traf SomL  e Cool Trof  EE Description     This is the volume in the trof     integer between          Touch the number to change value     ess Track t   us             MICRO TROUGH VOLUME AT START is used to indicate how much liquid is in the reservoir you  have chosen before any liquid has been removed  The system uses the delivery volume and the  number of rows to be filled to calculate the minimum volume needed to run the file and indicates it on  the display as the lower limit  You can set the value of this parameter in 1 mL increments from this  lower limit to 20 mL  58 mL  or 77 mL for the front  middle  and rear reservoirs respectively for the  MICRO TROUGH reservoir     The Cool Trof can hold 100 mL  Enter the amount of liquid volume present in trof at start of the program and press OK     Note  If tracking of volume of liquid in trof during change of programs or linking of programs then set  Track on  See screen below      132554 Plate Filling So X    Trof volume at start        Current Wool ure   trof 22 mL  trof ecmL  trof SomL   a Cool Trof    hs Description       This is the volume in the trof       Touch the number to change value     The value is an integer between     1 and 19 mL  Press Track      the remaining volume        25    Pressing the Track button will turn and activate the tracking volume feature of software on
21.  number to change 9wvalue   The value is an integer etueen  CU and See uL        Eli Hele    MICRO TROUGH MIX VOLUME is used to indicate how much liquid to aspirate into the tip and  dispense back into the MICRO TROUGH in order to mix the MICRO TROUGH contents  This    parameter can be set from 0 to 200 uL in 1 uL increments  0 indicates no mixing  for 12 channel head  and O to 50 uL in 1 uL increments for 24 channel head     13 00 42 Plate Filling    Delivery volume  166 ul  6 266     OK    EE Description     J    This parameter Sos Ran  much liquid to di ense   nto eccl  from the MICA TROF      Touch the number to change value   The value is an integer etween  QC anda See xL        FI He  r    DELIVERY VOLUME indicates how much solution should be dispensed into each well from the  MICRO TROUGH reservoir  This parameter can be set from 0 to 200 uL in 1 uL increments for 12  channel head and 0 to 50 uL in 1 uL increments for 24 channel head     23    o5429 Plate Filling ouL E X    dE x Description     HYou can zpecifu mixing mof  H tle well contents after  A tranzfer       Touch the number to change value   The value is an integer eiueen    c  Zero indicates NO mixing        Eu Cele    MIXES AFTER TRANSFER is used to specify the number of mixes after the aliquot has been  delivered to the plate  This parameter may be set from 0 9 in increments of 1  0 indicates no mix after  transfer     13351 Plate Filling eur ES     actual Values  Screen 2 3       Plate orientat ion        
22.  starting the next program  This is done by entering the number  9999   which will create the pause before proceeding command     26    13 08 38 Plate Filling Gull  A    Actual Values  Screen 34 3  Fill plate   E   b E F  amp  H  rus HBB    First Tip Row                   H al el    Change tips       13 10 11 Plate Filling    Actual Values  Screen 3 3    Fill prote B IRR   a d A I   ros  m IL e    Change tips  TES    S   Gack       The above display is for the WellPro 12 channel  96 well plate  in landscape or portrait    Plate Filling Gull  X       Actual Values  Screen 343  E    O       F G H  ru cos A a   D0Q0HQ  Q amp EGOHGE  First Tip Rou             e P E  e   Change tips    NN Back             mm aie EB Helper    m     gt         The above display is for WellPro 24 channel head  384 well plate     27    FILL PLATE ROWS is used to indicate the rows of the plate to fill and which to leave unfilled  Rows  are designated by letters A through P for 384 well plates and A through H for 96 well plates  To select  row A  press the A button which will then fill in with red  If you want all rows to be filled  press each  button  For rows that you don t want filled then do not press the button with corresponding row letter   Non filled rows will have no red filled in on the box     Actual Values  Screen 3 3  Fill plate   P   D    rous EIEIEIEIEIEIEIEH    Change tips  TES       soi Bec E       ENTER FIRST TIP ROW is used to specify which row of tips to use  Rows of the tip magazine
23.  to  L   De run the application   L       De Mo  AA    a   rial        EAR Next   INE       Touching Pressing the GO button will pop up a message to confirm that the appropriate plates are in  position on the deck  Once you have confirmed then touch press the OK button     131958 Plate Filling cul EA       E A O    E OOOO  A CRT LLL    Status  Running       EB Help    mm                        The above display is for the WellPro 12 channel head  96 well plate     30    Plate Filling Gaul x       cono  muinin   cono  cono  cono  cono  misin   cono  cono  cono  misin   ooo  cono  cono  cono  misin     000000500 00000 0001017  00 0000000 000 0000 a a a       P  Status  Running          pela  ets B Help       The above display is for the WellPro 24 channel head  384 well plate   The plate filling will begin with a status screen showing the rows as they are being filled  Pressing the    STOP button while program is running will cause a pause in the program and pop up a program paused  message with option to abort or continue or abort and return tips     13 20 34 Plate Filling    O E E eee  a    AN Program Paused    Lu    T dacmrmamsc    usi       Pressing the STOP button while program is running will cause a pause in the program and pop up a  program paused message with option to abort  continue or abort and return tips    Pressing the Abort button will abort the program or pressing the continue button will continue with the  program  The abort and return tips option will return 
24.  to NAT will keep track of next available tip that  has not been used  This should be set at NAT if you are linking programs or wanting to keep track of  next row of tips to be used while manual running programs  If you want to reset the next available tip  row to the beginning then at screen one press Rst NAT  See below     When you press Rst NAT located on screen one a Pop Up screen will be displayed asking to make  sure the deck is OK  If you press OK another screen will Pop Up asking     Change the magazine and select the next tip row  Next tip row    Note  Changing magazine is not required if you would like to continue to use same tips    CHANGE TIPS is used to indicate if the tips should be removed after the first liquid is dispensed and  a new set of tips from the tip magazine should be placed on the pipette head  thus decreasing    carryover  If you don t want to change tips  then the same tips will be used throughout the entire  operation     29    1334828 Plate Filling eu X    Actual Ualues  Screen 1 3  Volume in wel                            8 uL  Deliver from              a   L20nil 1  Mixes in Trof                              3     rof mix volume                         2688 uL  Delivery volume                   e  188uL  Nixes after transfer           2    uille    Next   INR       Eu Cele     Buses Plate Filling cuLA A   Actual Ualues  Screen 1 3   Volume in uell                   amp   amp  uL   De Y      7       Hi  Nake sure the deck   Tri is set  Press UK
25.  used  the WellPro liquid handler stops automatically and  displays the ENTER FIRST TIP ROW prompt again  Change the magazine and specify the row of tips  that you want to start with     Pause   Enter Delay Time  Instead of a time delay you also have the option to have a pop up screen    prompt you to press continue before starting the next program  This is done by entering the number   9999  which will create the pause before proceeding command    79    12 OPERATING HINTS AND MAINTENANCE    12 1 Overview    The WellPro 3000 Liquid Handler is designed to be used with a minimum of maintenance  In this chapter   we describe routine operations that can be performed by the operator    cAUTION CAUTION  Do not open the  Backpack Electronics  or disassemble the controller unit   There are no operator serviceable components in the instrument other than those describe  in the SERVICE AND MAINTENANCE and OPERATING INSTRUCTIONS sections     WARNING WARNING  For protection from injury by the WellPro liquid handler moving parts  Do Not  Remove the blue plastic cover while the WellPro liquid handler is operating or the power is  on     12 2 Tips    The WellPro liquid handler has been calibrated using WellPro 96 or 384 disposable tips  The design of the  tips and the manufacture of their internal volumes  orifice diameters  lengths  etc  to tight tolerance limits   assure the accuracy and precision of the liquid handler system  The length of the tips is of particular  importance  since the 
26. 6 268668     ES Description  S  This parameter determines lh    eu  much liquid is im each well before  any tranfer has made     ee the number to change volue     e value is a integer etueen  cC ang ze UL     EB Help    a        uil    VOLUME IN WELL PLATE 2 is used to indicate how much liquid is in each well of plate 2  The    system uses this value to determine how far down into the wells the tips should go and also to prevent  exceeding the volume capacity of the wells       eds ag Plate to Plate Sul A    Actual Ualues  Screen 144    Transfer Direct ion           e  P2 To P1   Volume in vell Plate 1        B uL    Volume in vell Plate 2      e 168 uL  Transfer Mode                            e   Several     Tanster Yo lume     4       58uL    siWexi    Def  Values Nest            EB Helper       TRANSFER MODE is used to tell the system whether to transfer 1 to 1 one row of plate 1 to the    corresponding row of plate 2  or to transfer one row of plate 1 to several different or multiple rows of  plate 2     50    13 52 22 Plate to Plate      Transfer volume  56 uL  6 766          Hype Description        This parameter determines how  much liquid ta transfer fram the  source plate     Touch the number to change wal ue   The value is an integer etween  C and ze uL        TRANSFER VOLUME is used to tell the system how much sample to withdraw from a source well for  transfer to a new well during a plate transfer  This parameter can be set in 1 uL increments  The  system calcula
27. LLPRO 3000 LIQUID HANDLER           cccccccccccccccccsccccccscsccccsccceecs 16   3     SYSTEM COMPONEN  g     m   mmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmrmrmmmmmmkcky   rimmmmmmmmmrmmmmmmmmmmmmmmmmmmiiiymmmmccrmmrmaHNI  17  3 1 INTRODUCTION rra ii ansias  17  3 2  WELLPRO WP3000 TOUCH SCREEN CONTROLLER       cccccccccccccccccccccccccsccccscvccccscvccsceccecscesvecs 17  3 3 THE WELLPRO WP3000 LIQUID HANDLING UNIT            ccce e e nn hh he e eher esee hereto 17  3 4 THE WELLPRO REAGENT CONTAINER       cecccccccccccccccsccccccsccccscecvccececcccscescccecvscscecesesceceecs 18   4 USER INTERFACE cta cuit tora tese sent ine deed Anl n oa E MEL UA RED DS 19  4 1 TOUCH SCREEN  INTRODUCTION mmmmmmmmmmmmmrmmmmmmrmmmmrmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmHH 19   D PEATE SIBI  com  o  20  5 1 OVERVIEW dae rbat sc ine a o CLIE se a Uo ED PAL MALA ee 20  5 2 CREATING AND EDITING A PLATE FILLING FILE           cc cece ccc ccc c ccc cccccccccccccececcccsccccccscvccscecesesees 20   6     SERIAL DILUTION ts leads 34  6 1 OVERVIEW smod eccL A A end A IU uo CUAL M ALII P DM MAL D E 34  6 2 CREATING AND EDITING A SERIAL DILUTION FILE           cc cece cccccccccccccccccccccccccecvccecvccccscecvscscecs 34   F    PLATE TO  PEATE TRANSFER coito ia das 47  7 1 E 47  7 24   YPES OF PLATE TO PLATE TRANSFER rs dd dis 47  7 3 CREATING AND EDITING A PLATE TO PLATE TRANSFER FILE        cccccccccccccccccscccccccscccccccccceccsceceecs 48   8  HOST CONTROL AND MANAGING FILES   coincida is 60 
28. NE tado OE A DIE 81    WellPro User Manual 01 03 07 vi    1 INTRODUCTION    1 1 Overview    THANK YOU            for purchasing the WellPro 3000 multichannel automated pipetting workstation  We are proud to send   you our flexible 12 or 24 channel automated workstation  which is capable of performing various routine   liquid manipulations  It is an intelligent alternative to tedious and potentially error prone manual pipetting  operations  Now  applications such as reagent addition  serial dilution  microplate replication and sample  dilution can be easily performed     The ProGroup Instrument Corporation WellPro WP3000 Liquid Handler  Figure 1 1  is designed to  perform the following liquid handling activities on a user programmable basis     e Precisely transfer liquids in volumes from 1 uL to 50 uL using disposable tips with the 24 channel  head   e Precisely transfer liquids in volumes from 1 uL to 200 uL using disposable tips with the 12 channel   head   Perform serial dilutions in almost any ratio    Perform serial dilutions of 16 wells or 24 wells simultaneously with 24 channel head   Perform serial dilutions of 8 wells or 12 wells simultaneously with 12 channel head   Precisely mix the contents of a microplate   Transfer samples to or from microplates   Perform mother daughter  repli plating    Perform well to well transfer   Cherry Picking  Optional Feature and is not standard w  instrument        Fig 1 1 ProGroup Instrument Corporation WellPro WP3000 Liquid Handler 
29. Reagent Containers    The WellPro liquid handler can be used with the MICRO TROUGH reagent container  each of which  consists of three reservoirs  Each reservoir holds a different amount of liquid   e g  20 mL  58 mL  and  77 mL   You can use the reservoirs to hold reagents that will be added to a plate or waste that has  been removed from a plate        The WellPro liquid handler can be used with a 100 ml chilled reagent container  You can use this  reservoir to hold reagents that does or does not required chilled  The trough also has disposable liners  as an added benefit     Chilled Trough    Disposable Liner       1 2 4 WellPro Templates    The WellPro WP3000 liquid handler uses a template to position microplates  reagent containers and tip  magazines on the movable table     Standard templates provided   e Standard Template for WellPro with a Long Bed    One general purpose template is used for WellPro long bed liquid handling operations  The well  plates can be orientated with the  96 well plates  12 well rows  A H  or  384 well plates  24 well rows   A P  landscape as shown in Figures 1 2  1 3  1 4  1 5    With the same template the plates can be  placed in a portrait orientation  96 well plates  1 12 or  384 well plates  1 24 well columns as shown in  Figures 1 6 and 1 7     E  i En ICR    Pg a  I m f 1i  Lua b    a    Ao    Ip Rack  46 or 364  ips  Landscape  Orientation Shown    Deck Position  2 96 or  364 well plate in  Landscape Orientation   Position also used fo
30. STINATION rows     DESTINATION ROW is used to indicate which row of the DESTINATION plate is used to place liquid  in during transfer  This parameter only appears if the  1 to SEVERAL  mode is selected in this file  In    that instance  the SOURCE row specified acts as the single source row for transfer to several  receiving or DESTINATION rows     Plate to Plate Transfer B uL    Actual Values  Screen del    Hake sure the deck  is set  Press OK to    run the appl ication     zie une        Touching Pressing the GO button will pop up a message to confirm that the appropriate plates are in  position on the deck  Once you have confirmed then touch press the OK button     56    Plate to Plate Transfer    A OU       Above display for WellPro 12 channel  96 well plate     nogogcoegoogaoemoegcaemoigaamagoegcaongmpog  aaa lada  010 10 10 G G III    000 I   OO UI IO O IO IO  ood o    col 0 00 O G fala da   D00 DDD G G G D O G O G O G G O O G   r   7    ae  1       Above display for WellPro 24 channel  384 well plate     The plate filling will begin with a status screen showing the rows as they are being filled  Pressing the  STOP button while program is running will cause a pause in the program and pop up a program paused  message with option to abort or continue    5     Plate to Plate Transfer eu Bs      A ooaoananaoanooonaocoaoananoanao    nogcgcogogocgoaoemogcaempiganmgogoogog    o  ol  ol  ol  o  ol  ol  ol  D  o  ol  ol       20 05 41   Ely Hel P      Pressing the STOP button wh
31. WellPro 3000  Liquid Handler       ProGroup    Instrument Corporation    i E UN    Ae ea    UN    H xA ems      l   y   T i  fi    l          a       o      1            MM         i ia as    ao       CE  i LL ml  gt    il hs    l       T SN   d i    Bas IA TNI A    I Lig       dui       P  M         a    a i     Wel        IL a7           dai is em    i   b  i ii   a    Omur rmz    xS    LII                  a A 5 E o       Li  b       WellPro 3000 Liquid Handler    User Manual    User Manual Rev  2 4  February 18  2007    Copyright    Copyright 2005 ProGroup Instrument Corporation  All rights reserved  Reproduction of the  accompanying user documentation in whole or in part is prohibited     Trademarks   WellPro Automated Liquid Handling System is a registered trademark of Progroup Instrument  Corporation    All other trademarks and registered trademarks are property of their respective holders    Disclaimer   ProGroup Instrument Corporation reserves the right to change its products and services at any time to  incorporate technological developments  This manual is subject to change without prior notice as part of a  continuous product development  Although this manual has been prepared with every precaution to  ensure accuracy  ProGroup assumes no liability for any errors or omissions  nor for any damages  resulting from the application or use of this information  This manual supersedes all previous editions     No liability for consequential damages    ProGroup Instrument
32. ack       PLATE ORIENTATION is used to indicate how the plate is positioned  The value that is selected  indicates the number of wells that will be under the pipette tips at one time     A H for 96 well plate landscape orientation  1 12 for 96 well plate portrait orientation  A P for 384 well plate landscape orientation    1 24 for 384 portrait orientation    40    EMPTY LAST ROW TO is used to tell the system where to place the extra volume of liquid  transferred into the last row of wells after a serial dilution     1     2     If you select OFF  the extra liquid will be left in the last row of wells     If you select 1ST ROW  the extra liquid will be removed from the last row of wells and return it to  the first row of wells you chose in ROWS TO DILUTE     If you select MAGAZINE  the system will remove the extra liquid and discard it into the tip  magazine     If you select MICRO TROUGH  the system will remove the extra liquid and discard it into the rear  reservoir of a MICRO TROUGH container located in the P2 cavity of the template     lC Note  MICRO TROUGH will appear on the display only when the 12 or 24 wells  landscape     across PLATE ORIENTATION selected  If performing a serial dilution in portrait then this  option is not available     LIQUID HANDLING SPEEDS is used to select the rate sample delivery from the tips  rapid  medium   or slow      13 48 41 Serial Di lution       Actual Values  Screen 273    Plate Type                            FLAT  Plate orientation 
33. an example  if you are diluting cells which may settle   the MIX BEFORE TRANSFER step might be used to agitate them back into suspension before  transfer by mixing  This parameter can be set from O to 9  0 indicates no mixing      37    IS EI em Serial Di lution    Nixes after transfer  3  8 9        ki Description     You can speci fu mixing of  the well contents atter  an galiquat is transfered     Touch the number to change value   The value is an integer Between  3  Zeroa ingicates MO mi insg        MIXES AFTER TRANSFER is used to indicate the number of aspiration delivery cycles that should be  performed after transferring a sample  This parameter can be set from 0 to 9  0 indicates no mixing      is sa ia Serial Di lution    Hell mix volume  S uL  8 188     hs Description     This parameter determines the  volumne to mix the contents of  the well before transfer     Touch the number to change value     The value is an integer etween  C and See ul        MIX VOLUME is used to tell the system how much solution should be used in the Mix step  Typically this  volume is 50  of the total volume in the well to be mixed  but will be more or less depending on the  application  when mixing cells  it may be desirable to use a lower volume of the total volume      38    13 32 53 Serial Dilution ouLE A    Actual Values  Screen 2 3    Plate Type                                  FLAT    Plate orientat ion                5    A H     Empty last rou to                e UFF    Liquid han
34. ate for  assay  culture  etc  The Plate To Plate button is used to establish a user file which can be stored and used  as desired     13 49 26 Plate to Plate A    Actual Values  Screen 14    Transfer Direct ion           e  P2 To P1   Volume in vell Plate Fe 6 uL  Volume in vell Plate 2      e 166 uL  Transfer Mode                    ae   1 TO 1     Tanster Yo lume                ex    58uL    Sexi   Def  Values Nest   ie       Press the Def  Values button to change back to system default values    13 49 51 Plate to Plate A    Actual Values  Screen 244    Mixes before transfer           Nixes after transfer                 nix Yo lume                               _     Liquid handling speed             Change Tips                                     _        Above display for WellPro 12 channel  96 well plate     48          Plate to Plate Transfer oul X           Actual Ualues  Screen 14    Transfer Direct ion           e  P2 To P1   Volume in vell Plate 1        a uL    Volume in vell Plate 2    e 56 uL  Transfer Mode          __    e   1 TU 1   Tanster Yo lume                   e e     25uL      E i   Def  Values Next        Hele      Above display for WellPro 24 channel  384 well plate           19 32 11       The TRANSFER MODE DIRECTION is a feature that is especially useful when it is combined with FILE  LINK because it allows you to transfer duplicate samples from the rows of one plate to another plate   Thus  using these functions in combination makes it possible to 
35. ch controls the software commands     60    Implemented Serial Commands   Initialize the WellPro machine    It s also highly recommended   HOME  Arg  HOME ALL  r HOME ALL OK r that you use it inside your  programs to update the  remaining volume in the  controller and avoid float  calculation   s offset   It makes an absolute  movement in the specified   MOVE X 125 2 OK r axis     Arg  X  Y  Z  ALL    MOVE  Arg  Pos Spd     Arg  X  Y  Z  Pos  0 to axis limit  Spd  1   4    FILL_TIPS   FILL_TIPS   r FILL_TIPS  OK r Fills the tips to maximum  volume from any previous  position    HOME_TIPS   HOME TIPS   HOME TIPS   OK Nr Dispense all the remaining  volume in the tips from any  previous position     WITHDRAW value  WITHDRAW 50   WITHDRAW 50 OK r This command indicates to the  WellPro the amount of liquid to  withdraw in uL  Value must be  an integer number in the  range of 1 to 200    This command indicates to the  WellPro the amount of liquid to  dispense in uL  Value must be  an integer number in the  range of 1 to 200     REMAINING   REMAINING   r Returns the remaining volume  in uL     PICK_TIPS col  mag  PICK_TIPS 3 PORT  r PICK_TIPS 3 PORT OK r   The WellPro will pick up the   Column  1  8 tips from the specified column    Magazine  LAND   PORT You must specifie the  orientation of the tip magazine   LAND or PORT     EJECT_TIPS column  EJECT_TIPS 2  r EJECT_TIPS 2  OK r The WellPro will eject the tips   Column  1  8 to the specified column  When   Column  0  eject only  co
36. ction    The basis of operation of the ProGroup Instrument Corporation WellPro 3000 Liquid Handler is the file   which is a set of instructions and conditions that are used to perform the desired operation  The operator  can establish  store and execute files via the touch screen controller module     The WellPro user interface consists of a touch panel that activates the liquid crystal display  LCD   From this  touch panel all program modes and variables can be easily accessed and adjusted  To pause a program   simply press the STOP Icon on the touch panel during a run  Touching the GO Icon resumes the program     All modes  commands and data input operations are accomplished using the touch panel  The  instructions and prompts are in dialog format  Variables can be changed by touching the text  highlighted in blue             ProGroup FroGiroup      Instrument Corp        WellPro    Autamated Liquid  Handling system        Mum cu  SS       Figure 4 1    When the system is powered up  the display will be as shown in Figure 4 1  Touching the Main Menu  button will pop up the main menu screen shown below  At the main menu screen you have the option of  selecting a process and creating a file with your parameters and saving the file     19    Hain Menu    Plate Ser ial Plate  Filling Dilution To Plate    Cherry    Picking settings       2 53 19       5 PLATE FILLING    5 1 Overview    Plate filling refers to the addition of a user specified quantity of liquid to the wells in a 
37. d Rate  9600  Parity  None  Data Bits  8  Stop Bits  1   e Before performing the procedure the first time you need to setup the Hypterminal parameters  located on your computer  Go to start menu All programs Accessories  Communications then  choose Hyperterminal  A popup up menu will now appear for you to enter a name for this  You  can enter a name such as WellPro and continue or give it no name to continue  Now you should  see the following popup menu    64    Mew Connection   HyperTerminal       e Hyperterminal      New Connection Properties    a  New Connection   Phangan    L ountry regior    United States  1  H    Enter the area code without the long distance prefis     Area code       Connect using    Conexant HDA D110 MDC W 92 b se    Conexant HDA D110 MOC 92 Mode  COM  TCP IP Miingock        Use country region code and area code   L  Redial on busy     uw          65    wellpro Properties    Connect To   Settings    Function  arrow  and ctrl keys act as     Terminal keys     Windows keys    Backspace key sends       CH     Del C2 Ctrl H  Space  Ctrl H    Emulation     ans      Telnet terminal ID  VT10U  Backscrall buffer limes    500 E        Play sound when connecting or disconnecting    Input Translation    ASCII Setup          wellpro Properties               Connect To   Settings    ASCII Setup           Function  arrow  and ctrl keys act as      Terminal keys C   Windows keys          ASCII Sending      Send line ends with line feeds  Echo typed characters locall
38. dilutions    As  an example  if equal volumes of sample and diluent were mixed during each step of the series  the  sample concentration would be 1 2  1 4  1 8  1 16  1 32  and so on in sequential rows     Hain Menu    Plate Serial Plate  Filling Dilution To Plate    Cherry    Picking sett ings         2 53 19    6 2 Creating and Editing a Serial Dilution File    At the main menu screen you have the option of selecting a process and creating a file with your  parameters and saving the file  Pressing the Serial Dilution button will open up a screen for changing the  serial dilution parameters       eim Serial Dilution cuLA A    Actual Values  Screen 1 73  Volume in source wel               Volume in uel                       a  Transfer Vo lume       _     Nixes before transt ere       s  Nixes after transfer         s  Nix volune    e    Sexi t Def  Values West       EE Help      Press the Def  Values button to change back to system default values    34    Serial Dilution SuL kK    Actual Values  Screen 143  Volume in source uell      e  Volume in wel                             Transfer Volume       e    Nixes before transfers    Nix volume                Plate Type                                        ae    a Exit Def  Values bet    PSS eS E      Pressing the text values parameters in blue will lead to other screens shown below so that parameters  can be changed              Rst NAT   Reset next available tip row  Pressing this will reset the next available tip row to the
39. dling speed       e High    Change tips                e    Link files         T   Back Next         Serial Dilution cul kK    Plate Type     ki Description     This parameter deternines  the bottom shape of the E cre          Miele EH    PLATE TYPE is used to indicate the design of the bottom of the plate  V shape  U shape  Flat   This  information is used to determine the height of the liquid in each well and thus calculate how far down  into the wells the tips should go  If you are not using a standard microplate  select custom for one of  the ten custom plate types available  The custom programs for non standard plates are configured in  the settings configuration from the main menu  In the settings menu you can set these parameters    and determine the amount to raise or lower the tip height  The height parameter can be set from 100  to 3500 in increments of 1 or 25        39    13 41 28 Serial Dilution cuLA A    Empty Last Row ta    UFF    ki Description     This parameter determines  uliere to place the extra val ume  transferred into the last row        E     Empty Last Row to  This parameter determines where to place the extra volume transferred into the  last row     13 40 41 Serial Dilution uL A    Actual Values  Screen 2 3    Plate Type                            FLAT    Plate orientat ion                    A H     Empty last rou to                e UFF    Liquid handling speed       e High    Change tips                                  _    Link file  x    WH B
40. e damage before plugging the unit into the mains to ensure that powering up of the  system will not create a hazardous condition or damage internal components  If the  damage appears significant  call your local ProGroup Instrument Corporation  representative before connecting the unit to the mains     Initial Installation of the WellPro 3000 Liquid Handler    Assembly  installation and final inspection of the WellPro 3000 Liquid Handler will be done by the user  To  install the unit     1  Connect the Touch Screen Cord to the back of the WellPro and slide the Touch Screen onto the  bracket connected to side of the unit     2  Place the power cord to the line into the socket into the rear panel of the liquid handling unit and plug  the unit into the line     16           WellPro    Autamated Liquid  Handling System        Wo c      iE       Figure 2 1  The Controller Screen when Powered Up    Power up the unit  The liquid handler will initialize and the controller will present Figure 2 1  The  pipette tip head will move in the Z upward direction and the table will move in the Y outward direction  to determine the zero  If the head does not move  contact your local ProGroup Instrument Corporation  service representative for assistance     3 SYSTEM COMPONENTS    3 1 Introduction    The ProGroup Instrument Corporation WellPro 3000 Liquid Handler system includes the following  components     e  WellPro Controller  Section 3 2   e WellPro WP3000 Liquid Handling Unit  Section 3 3  
41. en out   compromising accuracy  To avoid this  use the mix option prior to a programmed aspiration to equalize the air  in the tips before pipetting the liquid  Proper vapor pressure will be maintained even if the device is left idle with  filled tips for a prolonged period  Tip Immersion is important to ensure that pipet tips are properly immersed in  liquid before aspirating  Tips should be immersed just below the level of the liquid and the depth should be  consistent throughout the pipetting cycle  This will prevent air from being aspirated into the tips as well as  avoid extra liquid adhering to the outside of the tip     3 4 The WellPro Reagent Trough    The WellPro liquid handler is used with a Micro Trough which is a reagent container  The Micro Trough  container consists of up to three reservoirs  each of which is used to contain a reagent or solution  In  some cases  fluid from the wells is deposited in the Micro  Trough     The WellPro also uses a 1 ml chilled trough with disposable liners for reagents that require to be kept cool  during transfer     The WellPro WP3000 liquid handler uses templates to position microplates  reagent containers and tip  magazines on the movable table      Note that all WellPro   s can fill plates in landscape mode but the long bed WellPro is the only    instrument that can fill plates in both landscape and portrait orientation  The short bed can not fill in  portrait orientiation     18    4 USER INTERFACE    4 1 Touch Screen Introdu
42. ep to allow the droplet to contact the  bottom of the well     Air Gap    The air volume should be sufficient to assist the separation of the droplet from the tip to the well bottom   but not so great that air bubbles become a problem  The air gap is parameter that is often optimized by  trial and error  Approximately every 20 steps   1ul of air gap for 24 channel head and 8 steps      ul of air  gap for 12 channel head     77       Single Channel Head DISABLED         4th fixis Offset  8 0 o ESH   Vol Adj  20 ul Pos fd j  99      Turn Gt after  ED SEE Home Al   Enable or Disable          WellPro Supplies       200 ul Tips  SO racksfcase        Pana TOU    200 ul Tips  Sterile  SO racks case______    Part   TOUSU2    120 ul Tips  Sterile  Filter  S   racksicase Part TOOSOS    50 ul Tips  Man Filter  50 racksicase Part  TODG04    50 ul Tips  Sterile  50 racksicase_     _ Part   TOUSOS    3l ul Tips  Sterile  Filter  50 racks case Part TODSO06   30 ul Tips  Sterile  Mon Filter  SO racksicase_ Par  TODSO     3l  ul Tips  Non Sterile  50 racks case Partz  TOOSO0S    MicroaTroughs Sterile 48 troughsicase Part  MTOUSU2                      WellPro Support screen can be accessed from the support button located in lower right corner of the main  menu  This screen lists available pipette tips and troughs with corresponding part numbers  Please use  these part numbers when ordering supplies     11 LINKING FILES    11 1 Overview    The FILE LINK feature is provided to allow you to join 
43. er housing which contains nozzles that press into the tips to form airtight seals  e aplunger block which moves up and down to aspirate and deliver samples  e atip ejector plate which removes used tips    The head assembly slides up and down to bring the tips to the appropriate height to perform the  designated operations     The WellPro WP3000 can be configured with  a 24 channel  tip  air displacement pipetting head or a 12  channel  tip  air displacement pipetting head  Serial dilutions can be performed in the 16 or 24 channel  mode with 24 channel head to allow for maximum dilution capability with the 384 well plate or can be  performed in the 8 or 12 channel mode with 12 channel head to allow for maximum dilution capability with  the 96 well plate     An optional single channel well to well   cherry picker head can be added to the instrument  The single  channel head can perform well to well transfers and dilutions in a 1 200 ul range for the 96 WellPro and 1   50 ul for the 384 WellPro  This module uses an excel spreadsheet and requires a computer to operate     12 or 24 Channel Liquid  Head     s     2      LU  OC  E     a a  i LIB  E   P  i   I   Pu En  iste E Es i    Interchangeable Template for  snort bed WellPro and a single Ie  Template for the long bed     sliding Table that moves forward  and backward        Standard WellPro  Optional single channel cherry picking head not shown        TIU III    12 Channel Liquid Head 24 Channel Liquid head       1 2 3 WellPro 
44. erial dilution  reagent addition  Serial dilution  reagent addition     mixing  plate replication  sample mixing  plate replication   transfer  plate to plate and within   sample transfer  plate to plate  plate  and within plate           Technical Specifications   Dimensions Controller  Height 6 0   Width 9 5     Depth 8 5       Weight 3 Ibs   Power Requirements 120 220 240 VAC  47 63 Hz  2A   120 VAC  1A   240 VAC  Fuse 3A normal blow  Operating Temperature 23     3  C  68 79    F           82    83    
45. ext    Folder  EA Documents and Settings  Aussell                                              Press    Start      Go to Touch Screen and into Manage Files   Click on    Download Settings to PC      IMPORTANT WAIT FOR THE END COMMAND TO SHOW IN HYPERTERMINAL MENU AND LISTEN FOR  A    BEEP    sound  could take a couple of minutes   before you continue  Now press    capture  text    and then    Stop     very important  now you can disconnect and close the Hyperterminal  menu     e For downloading the customer backup program files to Wellpro repeat the same process used  for downloading the settings except for now click on    Download all files to PC    in the manage  user file section of touchscreen     10 ADJUSTING THE TIP HEIGHT     POSITION ADJUST SECTION    10 1 Overview    The depth of the tips in the wells must be properly set in order for the system to accurately aspirate fluid   When standard microplates are used  this depth is set by choosing one of the preset values    FLAT    U    or  V  that is presented in the PLATE TYPE parameter in the various files  However  when other plates  are used  in a few special situations   it will be necessary to manually set the tip height using custom file in  the settings menu under the position adjust section     70       Actual Rack  Magazine Land aj ka    Save current position as      Deck pos   B  Tire Bottom    Tie Sate   Ba   Tig TOP I      Orient   LAND   Well wal I a uL  e LEE    This position adjust screen allows for settin
46. fer has been made  This number is used to determine how far down into the wells the tips should go  and also to prevent the instrument from attempting to add more liquid than each well can hold  This  parameter can be set from 0 to 2000 uL in 1 uL increments  Do not exceed the volume capacity of the  plate type you are using  ie  350 uL in a standard 96 well flat plate or 1 2mL in a 1 2mL deep well plate   etc     21    12 58 08 Plate Filling cuLA A    Deliver from  Trof 88mL    Trof zeomLidTrof  amp eomLgTIrof SocmL  en els Wreck    EE Description     This parameter determines  Whether it should aet solution  from the trof        Il He lr    DELIVER FROM is used to indicate the MICRO TROUGH reservoir that contains the liquid to be  dispensed     155255 Plate Filling Gull  A    Mixes in trof  3  8 9     ES Description     You can speci u mixing of  the TROF contents before  an aliquot is taker     Touch the number to change woalue   The value is an integer eiueen  C and A  Zero indicates NO mixing        Eu Cele    MIXES IN MICRO TROUGH is used to specify mixing of the MICRO TROUGH contents before an  aliquot is taken  Mixing of a MICRO TROUGH is especially important with cells or other  inhomogeneous samples  This parameter can be set between 0 and 9  0 indicates no mixing      22       12 59 54 Plate Filling    Trof mix volume  266 ul  8 788        ka Description     This parameter determines hou  much liquid to aspirate into the  tip and dispense into the traf    Touch the
47. formance for Small Volumes    Precision and accuracy can be difficult to obtain when pipetting small liquid volumes  such as 1 0 pL     76    Critical parameters affecting performance included  Pipetting speed  slower is better for small volumes    Plate height  tip should be 0 1 0 3 mm above the well bottom   Slower pipetting speed prevented droplets  that formed at the ends of the tips from contacting the sides or top of the wells as the plate was raised   Optimal plate height ensured that the droplets made contact with the well bottom and were removed from  the tip during the dispense step    Piston Speed  Slow piston speed is recommended for small volume aspiration and dispensing    Plate Height  Plate height requires some trial and error to determine the optimal distance from the well  bottom  A height that places the tips too deep in the wells will seal the tip to the well bottom and not allow  the liquid to leave the tip  If the tips are not deep enough  the dispensed droplet will not make contact with  the well bottom and will not remove the droplet from the tip  see the following diagrams        4           Pip   tip                Papel tip    al         d      1 0    mm    Position of the tip in the plate before dispense Position of the pipet tip during dispense of  Liquid and air blowout  air gap    When positioning the plate under the tips for a small volume dispense  allow approximately 0 1 0 3mm of  space above the well bottom prior to executing the dispense st
48. g of positions for non standard plates  This menu also  allows for manual positioning of the head and deck positions           10 1 1 Editing Running the Position Adjustment Menu    You can change the value of each parameter as desired to provide the desired program to fill the plates     Positions can be moved at one or at twenty five microsteps at a time     Caution  Only change settings for Custom under actual rack  Do not change settings for any  other type of plate under the actual rack options  All other actual rack options besides custom  are set at the factory and changing could result in damage to the instrument and misalignment during  operation     For setting positions of your non standard plate     Press Home All button will home the machine    Place non standard plate onto deck of Wellpro    Manual press a pipette tip onto nozzle one of liquid head    Choose the custom plate number you want associated with this plate  Have option to choose  from 1 to 10 custom files    5  Select land  landscape  or Port  portrait  for the well plate in the Orient button     JA WYN      71       6  Using the arrow keys press left or right until deck moves the plate so the pipette tip on head is  aligned to center of the plate well  When aligned then press the deck pos button in the  save  current position as   and enter the deck position value        7  Using the arrow keys press up or down arrow to move the tip to the top surface of the well  plate  Then press the  tip top butto
49. ile program is running will cause a pause in the program and pop up a  program paused message with option to abort or continue     Pressing the Abort button will abort the program and pressing the continue button will continue with  the program     Plate to Plate Transfer PuL A    Enter Name  PP4    CEE   Cancel   Save     DRDS  9T T  aa   aja  c    e  r e  n1         t     w o     aja  s r  v v u x Y 2   eee Jos Jae  enter  l    20 08 44 EIE He lr    After setting the variables to desired value go back to screen 1 of the plate to plate transfer menu and  press the Save button to save the parameters  Enter the desired file name in the Enter Name field and  click on enter button then the save button     The save can be performed after setting the variables and before pressing GO to run the program  Or    the program can be saved after running the program by pressing the back button to screen 1 of the  plate to plate transfer menu and then press save button     58    Plate to Plate Transfer ou B A    Select File     Be Description     llse the arrows to find the file   Fress CLoqad  to load the file   Fress Cancel  to exit        i uu GO    ui  fee        Help    To load a saved program press the load button and then use the up or down scroll button to select the  program to run     135751 Plate to Plate eut X    Actual Ualues  Screen 14    Transfer Direct ion           e  P2 To P1   Volume in vell Plate 1           uL    Volume in vell Plate 2      e 168 uL  Transfer Mode     
50. istance  Adjusting this setting can result in damage to the liquid head     Offset   Is for adjusting volume for viscous liquids  Contact ProGroup technician for technical  assistance     Max Vol   This will set the upper liquid calibration limit  The max volume should initial be set at 1000  for a 50ul tip  24 channel head  and 4000 for a 200ul tip  12 channel head  and then press home all   Now use the plate filling routine to fill with volume of 50ul  24 channel  or volume of 200ul  12  channel  then use a gravametric method or reader to determine accuracy  Determine the percentage  difference from the actual result to the theoretical value  Now reduce or increase the 1000 for 50ul tip  or the 4000 for a 200ul tip setting by the same percentage difference  Run the plate routine again with  200ul or 50ul and record the results  The results should now be in acceptable range     1 ul Steps  This will set the lower liquid calibration limit  To calibrate this setting the value should be  changed to 8 steps for 12 channel head and 20 steps for 24 channel head  Now use the plate filling  routine to fill with volume of 1ul and then use a gravimetric method or reader to determine accuracy   Determine the difference from actual result to the theoretical value  If the liquid is low then increase  the motor step by 1 if the liquid result is high then decrease the value by 1 step  Run the plate routine  again and record the results  Repeat process until acceptable results are produced 
51. lumn 0  the machine will   no eject the tips in it s actual   motion  position    Magazine  LAND   PORT You must specifie the  orientation of the tip magazine   LAND or PORT     DELAY SEC value  DELAY_SEC 5  r DELAYSEC 5 OK r Causes the program to pause  for the number of seconds   Delay for the number of specified  Seconds must be a   seconds specified  whole number in the range of 1  to 1x10     MOVE X 125 2  r       Value  1   200    DISPENSE value  DISPENSE 41  r DISPENSE 41 OK r    Value  1   200          61    DELAY_MS value  DELAY_SEC 5  r DELAYSEC 5 OK r Causes the program to pause  for the number of milliseconds   Delay for the number of specified  Milliseconds must be   milliseconds specified  a whole number in the range of  1 to 1x108    RATE speed  RATE 2 OK r Changes the withdraw and  dispense speed  1 is the lowest   Speed  1 4 speed and 4 is the highest  speed     RATE    BEN Uo  Rem the current rate speed   Returns an integer number  Uo Rime 1 and 4     BEEP value  ES BEEP 350 OK r Causes the controller to emit a     beep    sound for the number of   Causes the controller to milliseconds specified       beep    for the number   of milliseconds   specified     WARNING   WARNING    r WARNING  OK Wr Causes the controller to emit a  3 beep tone  Useful as an  attention getting warning  signal     9 SETTINGS CONTROL       9 1 Overview    Settings section allows the user to set the internal clock and alter the settings for serial port configuration   It also allows 
52. n  in the  save current position as   and enter the value  shown for the head position     72       Using the arrow down key move the pipette tip head position until the tip touches the bottom  of the well  Use caution when moving the head down with arrow key  when nearing the bottom  of well use the microstep 1 arrow  When the tip touches bottom of well enter the value shown  in head position into the tip bottom value shown under    save current position      To determine if tip is at bottom of well try slightly moving plate by hand while moving head    down  Once you feel resistance then that means tip has reached bottom of well  At the correct  tip bottom position the plate can be moved side to side but not up or down     73       9  Using the arrow up key move the head pipette tip above the top surface of plate  The bottom  of the tip should be moved to a position above the plate that it has no chance of hitting any  objects on the deck if the deck was to be moved  This is the position that the tip will be at  while the deck is moving the plate so that it will clear the plate  This is considered the tip safe  position  Enter the Head position value into the  save current position as   tip safe value    10  Enter the volume of liquid in the wells of the well plate     Actual Rack  Magazine Land  E  Deck Pos         zl    I Orient IL  f   pelo  enter       To enter values in the    save current position as     click on the blue text next to position that requires  changing 
53. other screen will pop up asking     Change the magazine and select the next tip row  Next tip row     Note  Changing magazine is not required if you would like to continue to use same tips     12 S81  Plate to Plate SuULA A    hs Description     This parameter deter  the bottom shape of       PLATE 1 TYPE is used to indicate the design of the bottom of plate 1  This information is used to  determine the height of the liquid in each well and thus calculate how far down into the wells the tips  should go  If you are not using a standard microplate  select CUSTOM and determine the amount to  raise or lower the tip height     23      Sea  Plate to Plate SuL A    Plate Type     hs Description     This parameter determines  the bottom shape of the plate        PLATE 2 TYPE is used to indicate the design of the bottom of plate 2  This information is used to  determine the height of the liquid in each well and thus calculate how far down into the wells the tips  should go  If you are not using a standard microplate  select CUSTOM and determine the amount to  raise or lower the tip height     LINK TO FILE is used to indicate what the system should do after it completes the file it is currently  running     If you want the system to stop at the end of the file do not enter anything in the link file field       Plate to Plate Transfer eu M    Enter Delay Time  8  60 9999 sec     CEGET    DEDOS  9T TT  T  7   ais  c    e  r  e  1         t     sw  o ie  a a  s r v v u x v z    eee Jos  c
54. plate from a Micro   Trough Reservoir  The Plate Filling button is used to establish a user file which can be stored     12 56 07 Plate Filling Gull  A    Actual Ualues  aran ls  Volume in wel                             amp uL  Deliver from                          eIL88rmL 1  Mixes in Trof                              3  Trof mix volume           288uL  Delivery vo lume                   e 166uL  Mixes after transfer              E             5 2 Creating and Editing a Plate Filling File  When you touch the Plate Filling button  the opening plate filling screen is presented  You can change the    value of each parameter to provide the desired program to fill the plates  To change a plate filling  parameter  touch the text in blue and enter the desired value     20    12 56 55 Plate Filling cuLA A    Actual Ualues  Screen 143    Volume in uell                   amp  B uL  Deliver fram                      eTr88nL 1  ni     Change actual values     to default values   e    Mi   me    Next   RR    EB Helper    F              Press the Def  Values button to change back to system default values    Plate Filling ZuL A    Actual volume in well  gul ra 2888     bi Description     J    This parameter determines haw  much liquid is in each well before  any tranfer has made     Touch the number to change woalue   The value is an integer etween  C and See uL        12 37 06 B Helper    ACTUAL VOLUME IN WELL AT START is used to indicate how much liquid is in each well before any  trans
55. position adjustment for non standard microplates in a custom file and manual moving head  and deck positions     Hain Menu    Plate Ser ial Plate  Filling Dilution To Plate    Cherry  Pick ing    Sett ings       2 35 19       Pressing the Settings button will open the Settings screen     62    Settings       Hanga e    Files    14 11 11       Pressing the Set Clock button will open a screen where the settings can be changed  Pressing the Set  Serial Port will open the screen for changing the Serial Port configuration  These settings will be set at  the factory     Monday 26 X February    gar    14 11  41       Pressing the text in blue will allow you to change the variable date settings  Press OK button after  changing the variable to accept the change     63    Serial Port Conf igurat ion  Baud Rate  9608 E       Por ity  None v   2     Data bits  8 Im El  Stop bits  1 iw  El     Gy Press   l v     1  to change the values        The serial port configuration allows for setting values required to communicate to external computers  or other devices  The values are preset at the factory     Manage User Files     Doun load Al  Files to PC  Restore All Files from PC  Delete ALL User Files    Download Settings to PC  Restore Settings from PC    Status     The Manage user files                               DownLoad Position Settings and Files from Computer to the WellPro    e Connect serial cable to back of WellPro and to Computer   e Confirm on Touch screen that settings are  Bau
56. proper  draw off  of liquid from the tip depends heavily on its depth in the liquid that  it is in contact with  Tips not manufactured by ProGroup Instrument Corporation may decrease the  accuracy and precision of the system     12 3 Power Interruptions    If the power supplied to the WellPro has been interrupted  the following actions will happen when the  power is restored     1  If you were editing a file  you will lose the file and will have to re edit the file   2  If you had just stored a file  the WellPro will store the file     3   f you are in the middle of a run  you will lose the run  Homing the instrument will sequence it back to  a point where you can start over     12 4 Maintenance    12 4 1 Preventive Maintenance    To ensure trouble free operation  keep the WellPro liquid handler clean and free of chemicals  dirt  and  dust  To ensure trouble free operation  you should keep your WellPro liquid handler clean and free of  chemicals  dirt  and dust  Any liquids spilled on the WellPro liquid handler should be wiped off  immediately     80    Keep your WellPro liquid handler free of any corrosive reagents  Wipe spills immediately  Clean non  contaminated work surfaces regularly with a damp cloth    12 4 2 Cleaning up Spills    If solution is accidentally spilled on the instrument  clean them up immediately  Although all electrical  components within the instrument have been either shielded or sealed against fluid contact  there may be  long term deleterious effects
57. r  Reagent Troughs     Deck Position  1 96  or 384 well plate in  Landscape  Orientation  This  position can also  accomodate portrait       Fig 1 2 Standard Template for Long Bed WellPro showing plates positioned in landscape orientation    Position  2 can   accomodate well plates    roughs  deep well   blocks and tube racks   EE shown     plates  tube racks  and deep well blocks       Fig 1 3 Standard Template for Long Bed WellPro showing plates positioned in landscape orientation       Fosition  2 Chilled   rough with  disposable liner far  plate filling       Fig 1 4 Standard Template for Long Bed WellPro showing plates positioned in landscape orientation    Position  2 with 3 cavity  rough shown  s   ml  50  ml  20 ml  for plate filling        Fig 1 5 Standard Template for Long Bed WellPro showing plates positioned in landscape orientation    Position   1 with well    plate in portrait  orientation  serial dilution  In portrait        Fig 1 6 Standard Template for Long Bed WellPro showing plates positioned in portrait orientation    Albo lap aa    alk            i    TEJ  5   T       Fig 1 7 Standard Template for Long Bed WellPro showing plates positioned in portrait orientation    10    e Standard Templates for WellPro with a Short Bed    The short bed requires two templates  One template is for positioning plates in a landscape  orientation and the other template for portrait orientation  Landscape template can accept well plates  orientated  96 well plates  12 well ro
58. r than the volume selected     13 30 06 Serial Di lution    Transfer volume  56 uL  6 288        Lt Description     This parameter determines    Aow  much liquid to withdraw from the  original well     Touch the number to change woalue   The value is an integer etueen  C and 2ee uL        I  BIDS    The above display is for WellPro 12 channel  96 well plate     36    Serial Dilution SuL kK    Transfer volume  26 ul  6 56        ES Description     This parameter determines how  much liquid to withdraw from the  original wel      Touch the number to change walue   The value is an integer etueen  c and ee uL        13 3202 15 I    Fe ir      The above display is for WellPro 24 channel  384 well plate     TRANSFER VOLUME indicates how much sample should be withdrawn from the original well for  transfer to the new well during a serial dilution  This parameter can be set from 0 to 50 LL in 1 uL  increments for 384 well plates and O to 200 LL in 1 uL increments for 96 well plates  A transfer  volume of 0 may be used if you wish to simply mix the contents of the well     13 30 42 Serial Di lution    Nixes before transfer  3  8 9        ki Description     You can speci fuy mixing of  the well contents before  an aliquot is transfered     Touch the number to change wol ue   The value is an integer hetween  and SS  zero indicates NO mixing        MIXES BEFORE TRANSFER is used to indicate the number of aspiration delivery cycles that should  be performed before transferring a sample  As 
59. ration  To select row A  press the A button which will then fill in with red  If you want all rows to  be filled  press each button  For rows that you don t want filled then do not press the button with  corresponding row letter  Non filled rows will have no red filled in on the box     ENTER FIRST TIP ROW is used to specify which row of tips to use  Rows of the tip magazine are  designated by letters A through P  back to front  or A through H     42    First Tip Row NAT   Setting the next First Tip Row to NAT will keep track of next available tip that  has not been used  This should be set at NAT if you are linking programs or wanting to keep track of  next row of tips to be used while manual running programs  If you want to reset the next available tip  row to the beginning then at screen one press Rst NAT  See below     13 43 53 Serial Di lution    Actual Values  Screen 343    Fill plate   E   P    os a    Soy Back       When you press Rst NAT located on screen one a Pop Up screen will be displayed asking to make  sure the deck is OK  If you press OK another screen will pop up asking     Change the magazine and select the next tip row  Next tip row     Note  Changing magazine is not required if you would like to continue to use same tips     43    13 44 21 Serial Dilution ulf A    Actual Ualuez   Fill plate   E   D    screen 3573    Hake sure the deck  is set  Press OK to  run the appl ication        Touching Pressing the GO button will pop up a message to confirm that the
60. rear Jenter  T      c ue ID E            If you want the system to perform another file after the present file is complete  enter the name of the  file in the enter name field and enter amount of seconds would like for time delay before running the  next file  Press enter after entering text in the fields to accept and then exit     Pause  Enter Delay Time  Instead of a time delay you also have the option to have a pop up screen prompt    you to press continue before starting the next program  This is done by entering the number  9999   which will create the pause before proceeding command     54    14 01 05 Plate to Plate Sul A    Actual Values  Screen del    Irons er A B    BE    IILICICICICICICI    a      ERE       eke Hele    1 to 1transfer  Above display for WellPro 12 channel  96 well plate        Plate to Plate Transfer PuL A    Actual Values  Screen del    A B cC D    Tronstor  M ER    rou ad Bee         E Gack         2i eS i1    1 to 1transfer  Above display for WellPro 24 channel  384 well plate     TRANSFER ROW is used to indicate which row of the source TRANSFER plate is used to place  liquid in during transfer to the corresponding row on destination plate    55    ETE Plate to Plate    Actual Values  Screen 4 4    esa A B    D    aooododa    Destination    E   BE    PL apodo    soi Bec       1 to Several  Above display for WellPro 24 channel  384 plate     SOURCE ROW  the SOURCE row specified acts as the single source row for transfer to several  receiving or DE
61. rogram     45    Im Seri ial  Di lut i ion oua x    Enter Mame  SD     j2 3 4 s e  v 8 9 e   jel    Ale ic ole lr ie  ali ly JK  L in   m oj ejoa n s r uju u x  v je   AMES  Beet  eters lates  GU    13 49 50  Help          Saving a Program after setting the variables to desired value go back to screen 1 of the serial dilution  menu and press the Save button to save the parameters as a program file     Use the keyboard on the display to enter the alpha numeric name of the program and then press enter  and save     The save can be performed after setting the variables and before pressing GO to run the program  Or  the program can be saved after running the program by pressing the back button to screen 1 of the  serial dilution menu and then press save button     Serial D MA EN  Select File     SD  a al    Be Description     llse the arrows to find the file   Fress CLoqad  to load the file   Fress Cancel  to exi       19 50 28  scr SEIEN          To load a saved program press the load button and then select a file to load by using the up or down  arrow scroll buttons  Press the load button then go to next screen and press GO button to run program     46    7 PLATE TO PLATE TRANSFER    7 1 Overview    Transferring an aliquot of sample from one plate to another is called  plate to plate  transfer or  replica  plating   This technique allows for transfer of samples in a SOURCE plate to a RECEIVER plate for  assay  Culture  etc    The steps required to perform the plate transfer are
62. s an additional configuration option     A 12 or 24 channel  tip  air displacement pipetting head is included on the WellPro liquid handler as most  protocols are designed to be performed in the 12 or 24 channel mode  but serial dilutions can be  performed in the 8 or 16 channel mode to allow for maximum dilution capability with the 96 or 384 well  plate     The table assembly drives the plate which holds the well plates and the Micro Trough reagent containers     The precision of this sensitive device is affected by a series of variables  These include the degree to which  the pipette tips are able to be wet  which is dependent on the viscosity of the pipetted liquid  the dimensional  accuracy of the tip orifice  piston speed and delay time  Therefore  please keep the following in mind when  using the WellPro  Liquid is pipetted with vacuum pressure generated by the pistons    This technique requires dwell time to equalize air pressure in the pipet tips during pipetting  Pipetting time is  highly dependent upon the properties of the liquid factors  It is necessary to allow some dwell time during  pipetting operations  particularly for smaller volumes and viscous liquids  Changing the aspirate speed to a  lower setting of medium or slow will provide more dwell time     Rinsing if dry tips are used  more time is required to saturate the dry air with moisture  Vapor pressure  increases above the pipetted liquid inside a dry tip  As a result  dry tips may cause liquid to be driv
63. s to find  e to erase 9a    ile  to erase    to exit        Help       To delete a program you can choose delete to delete specific files you have saved in the serial  dilution  plate to plate and filling sections  Choose delete file to delete a specific file program     A message will pop up    Do you want to delete this file     you can choose yes or no to continue     13 25 43 Plate Filling Gull  A    Actual Ualues  Screen 1 3  Volume in uell                   amp  B uL  Deliver fram                      eTLr88nmnL 1  ni     Change actual values  Tre    to default values     De  Hi        Rst NAT   Reset next available tip row  Pressing this will reset the next available tip row to the first  row in the tip rack  Rst NAT is only active when NAT is selected on last screen in the First Tip Row  field     Rst VOL   Will reset the volume in the trough  This allows tracking the level of liquid in the trough as it  is used  This is only active if Tracking is set to ON     A    GO    button exists at the lower right hand corner of every screen  This can be pressed at anytime to  run the current program loaded into the system     33    6 SERIAL DILUTION    6 1 Overview    Serial Dilution is the progressive dilution and redilution of a liquid  In this process  a sample is added to a  diluent and the two are mixed  An aliquot is then removed for addition to the next diluent containing well   This sequence is repeated until the desired number of dilutions have been obtained   serial 
64. t  please contact your local ProGroup Technical  Service Department  A ProGroup Instrument Corporation technical service representative may be able to  resolve the problem over the telephone using a basic check out procedures  If the problem cannot be  resolved in this manner  the technical service representative will arrange for a field service representative  to visit your lab to repair the unit  If the unit cannot be repaired in your lab  arrangements will be made to  return the unit to ProGroup for factory repair     Only qualified personnel should attempt service or repair work on the WellPro operating circuits or  mechanism     81    Performance Specifications    Pipetting Channels 24 way format  Volume Range 1ul to 50ul in 1ul increments  Precision A    100ul  lt 1 0  CV    50pl Do     f 096CV    10pl    sul  lt  3 0  CV    1l pod   5096 CV  Accuracy  AAN    100pl    50 OO    10l    sl  lt      2 0     ul BO  Throughput mess  Serial Dilution OOOO  50ul Transfer Volume asas  No Mixing  No Tip Change   25 seconds 40 seconds  Landscape Format  Plate to Plate Transfer AA    50ul Transfer Volume  No Mixing  With Tip          1 minute  25 seconds 2 minutes  50 seconds  Change on each row  Landscape Format  Plate Filling  p  100ul Transfer Volume  MO MIRE NO 1110 Gene 50 seconds 1 minute  30 seconds  Landscape Format  Plate Formats 96 well standard  shallow  deep 384 well standard  shallow   well  microtube  V  U  and flat deep well  V  U  and flat bottom  bottom  Functions S
65. tes the maximum TRANSFER VOLUME for the row by dividing the VOLUME IN WELL  AT START by the number of transfers specified for that row     13 52 57 Plate to Plate         Actual Values  Screen 24    Nixes before transfer         6  Mixes after transfer          e     8  nix Yo lume                                amp   Liquid handling speed     amp       Change Tips                                     _       gl Back Next mie       MIXES BEFORE TRANSFER is used to indicate the number of aspiration delivery cycles that should be  performed before transferring a sample  For example  when you are diluting cells which may settle  you    should agitate them back into suspension before transfer by mixing  This parameter can be set from O to  9     MIXES AFTER TRANSFER is used to indicate the number of aspiration delivery cycles that should be  performed after transferring a sample  For example  when you are diluting cells which may settle  you  should agitate them back into suspension after transfer by mixing  This parameter can be set from 0 to 9     MIX VOLUME is used to tell the system how much solution should be used in the Mix step   CHANGE TIPS is used to indicate if the tips should be removed after the first liquid is dispensed and a    new set of tips from the tip magazine should be placed on the pipette head  thus decreasing carryover  If  you don t want to change tips  then the same tips will be used throughout the entire operation     21    Iss So Plate to Plate Sul A    
66. the operation and maintenance of the ProGroup Instrument Corporation  WellPro WP3000 Liquid Handler  Read the manual in its entirety prior to operating the instrument     This User Manual has been designed to give you the information you need to     This User Manual also describes features and specifications of the ProGroup Instrument Corporation    Review safety precautions    Install the system   Use the system in routine jobs and research   Perform basic maintenance procedures     WellPro WP3000 Liquid Handler     This manual includes the following sections     Installation   System Components   Plate Filling   Serial Dilution   Plate to Plate Transfer   Position Settings   Managing Files   Linking Files   Adjusting the Tip Position for Custom Well Plates  Operating Hints and Maintenance  Specifications    13    2 INSTALLATION PROCEDURES    2 1 Overview    The ProGroup Instrument Corporation WellPro 3000 Liquid Handler is designed to be installed by the  operator  This chapter describes how the unit is to be unpacked and assembled     2 2 Location of the Unit in the Laboratory    The unit should be installed in a facility with the following conditions     e The temperature should be maintained between 20 26  C  68 79  F   To prevent temperature  fluctuations  do not place the WellPro 3000 liquid handler in direct sunlight  near equipment that gives  off heat  or under heating or air conditioning outlets    e If flammable or toxic solvents are to be used  a suitable ventila
67. the tips to the rack and abort the program     31    Plate Filling euLB X    Enter Name  PF1    Et   Cancel   Save     3T2T3  TS Te T  T9  T T T T7  aja  c    e  r e  1      x  e    w o     aja  s r  v v u x Y z  seee Def    191357 Ep  H                              Saving a Program After setting the variables to desired value go back to screen 1 of the plate filling  menu and press the Save button to save the parameters as a program file  Use the display keypad to  enter the desired program name  The name can be any alpha numeric name  After entering the name  click on enter button and then the save button  You are now ready to click on the exit button and go  back to main plate filling screen     The save can be performed after setting the variables and before pressing GO to run the program  Or   the program can be saved after running the program by pressing the back button to screen 1 of the   plate filling menu and then press save button    Plate Filling eu gx  Select File     PF1 aj     Cance   imu        EE Description  E    llse the arrows to find the file   Fress CLoagd  to load the file  Fress Cancel  to exit                 19 15 02 WHat Heip        To load a saved program use the up or down arrow keys to scroll and select the program to load and  run  This will load the parameters for the program to be run  Then go to the next screen and press     GO    button to run program     32    13 22 44 Plate Filling Gull  A    Select File     Es Description     se the arrow
68. tion system should be provided    e The use of open flames in the laboratory should be prohibited    e Corrosive vapors or dust should not be present as these materials can adversely affect the long term  performance of the system     The Well Pro 3000 module requires approximately 24 5  x 11 50  x 16 5  of lab bench space     14    lC Note  Place the ProGroup Instrument Corporation WellPro 3000 on a stable  level bench or hood   Excessive jarring or vibration during operation may affect its performance     2 3 Power Requirements    The ProGroup Instrument Corporation WellPro 3000 Liquid Handler is designed to operate at 100  120   220 or 240 V  50 60 Hz  with a maximum power consumption of 360 watts  The operating potential is set  at the factory and is indicated on the serial number tag on the rear panel of the system     WARNING WARNING  Verify that this voltage is correct for your location before installation     cAUTION CAUTION  ProGroup Instrument Corporation WellPro 3000 Liquid Handlers shipped to  locations in the United States and Canada are supplied with a standard three conductor  power cable and a three terminal plug that provides an earth ground  The unit MUST be  connected to a three terminal socket that is properly wired according to the U S  National  Electrical Code and is grounded to a true earth ground  The use of an adapter to a two   terminal outlet is PROHIBITED     15    2 4    Unpacking and Inspection    The ProGroup Instrument Corporation WellPro 3000
69. to Printer       67                               wellpre   Hyper Terminal  File Edt View Call Transfer Help    Send Text File    Look in   EJ Desktop      O   ge i    my Documents  E My Computer    My Recent 8 My Network Places  Documents     3    Desktop    My Documents    hy Computer    e     File name    ve    My Network Files of type  Text file    TXT            e IMPORTANT WAIT FOR THE END COMMAND TO SHOW IN HYPERTERMINAL MENU AND LISTEN FOR  A    BEEP    sound before disconnecting  Now you can press    call    disconnect and close the  Hyperterminal menu    e For downloading the program files to Wellpro repeat the same process used for downloading  the settings except for now click on  Restore all files from PC  in the manage user file section  of touchscreen instead of  Restore all files from PC      68    Upload Customer Settings and Files from WellPro to a Computer    e Connect serial cable to back of WellPro and to Computer  e Confirm on Touch screen that settings are   Baud Rate  9600   Parity  None   Data Bits  8   Stop Bits  1    e Click on the Hypterminal Icon located on Desktop  e Go back to Hyperterminal menu on computer and    Transfer    then Click on    Capture Text    and  pick the location and file name you would like to save it as         amp  wellpro   Hyper Terminal  File Edit View Call BER    O me   sf     Send File       Receive File          Capture Text      Send Text File       Capture to Printer    69    e wellpro   HyperTerminal       Capture T
70. transfer from row A of plate 1 to rows A  and B of plate 2  then automatically continue with another file which transfers from row B of plate 1 to  rows C and D of plate 2  and so on     TRANSFER MODE DIRECTION also allows you to use a 384 well plate  24 channel head  or 96 well  plate  12 channel head  as a reagent reservoir to deliver multiple reagents to a single assay plate  You  can place the same or different reagents in each of the 24 or 12 columns  and or each of the 16 or 8 rows  of the source plate  These reagents can be delivered to specified rows on the destination plate  This  arrangement minimizes reagent waste     TRANSFER DIRECTION is used to indicate whether the system should transfer from plate 2 to plate 1 or  from plate 1 to plate 2  i e  either plate 1  the plate in the front cavity of the template  or plate 2  the plate  in the middle cavity  can be used as the source plate     IEEE  Plate to Plate SuL    Plate 1 volume well     uL  8 726808     EE Description  E  This parameter determines haw   much liquid is in each well before  anu tranfer has made     Touch the number to change woalue   The value is an integer etween     and ze uL        VOLUME IN WELL PLATE 1 is used to indicate how much liquid is in each well of plate 1  The  system uses this value to determine how far down into the wells the tips should go and also to prevent  exceeding the volume capacity of the wells     49      Sian  ters Plate to Plate SuL A       Plate 2 volume well  166 uL  
71. two  or more  stored files as a sequence enabling  the user to automate very complex liquid handling operations  This prompt permits you to direct the  WellPro liquid handler to transfer control to another file immediately after completing the file that it is  currently running instead of terminating the operation of the file     78    Plate to Plate Transfer B uL    Actual Values  Screen 3 4    Plate 1 tupe FLAT  Plate   type FLAT    Link files      CEGET    DEDOS  9T  eT na  ais  c    e  r  e w 1      x  e    m fof  aja  s r v v u x v z    ses  os Tere Jer       11 2 Using Linked Files    When the system is operating using a linked file sequence  the sequence will use the tips indicated in the  ENTER FIRST TIP ROW prompt for the first file in the sequence  This prompt appears regardless of  whether the tips are to be changed in the first file  The user should respond by specifying the row of tips  that you want the WellPro liquid handler to select first     The WellPro uses the same  counter  to keep track of which tips have been used  whether you have  specified tip changes or not  Accordingly  each time the WellPro liquid handler links to the next file in a  chain  it sequences through the tip magazine to select the next row of fresh  uncontaminated tips   Likewise  if you start a new file  or restart the same file  the counter automatically increments  causing the  WellPro liquid handler to select the next row of unused tips     When the last row of tips  row A  has been
72. ws  A H  or  384 well plates  24 well rows  A P  landscape as  shown in Figure 1 8  The portrait template accepts plates in a portrait orientation  96 well plates  1 12  or  384 well plates  1 24 well columns as shown in Figure 1 9       1 La  7 z g       EL S LE th PL     a PF a F   Fm TAE          EATAZA TA RA RA ARA  ROS    orientation for plates   ubes and troughs     Position  1 for well  plates and tube racks in  landscape orientation        Fig 1 8 Standard Landscape Template for Short Bed WellPro showing plates positioned in landscape  note   for portrait orientation this template must be removed and replaced with a portrait template     11    EID   On       ora  cb dti    2    ie Es i T AS P    F  a mw  RE    Fortrait orientation for  serial dilution  This Is fo  short bed vvellPro only   emplate must be  changed If landscape  orientation Is required    Fus                 Teo  E    EIE    EXCESS USA HR    mae       he      j a  g div T1 b    r T  m    Mote  Plate filling in  portrait orientation on  he short bed WellPro  can not be done  If  ling In portrait Is  required then must use  along bed vvellPro        Fig 1 9 Standard Portrait Template for Short Bed WellPro showing plates positioned in Portrait  note  for  landscape orientation this template must be removed and replaced with a landscape template     12    About the User Manual    This User Manual has been written for the end user of the system  e g  a laboratory technician  and  provides information about 
73. y    Line delay  E   milliseconds   Character delay  milliseconds     ASCII Receiving           Backspace key sends       CH     Del       C3 EtrH  Space  Ctrl H               Emulatian     las    Terminal Setup   Telnet terminal ID  427100    an                   Append line feeds to incoming line ends      Force incoming data to 7 bit ASCII  Wrap lines that esceed terminal width       Backscroll buffer lines                Flay sound when connecting or disconnecting    Input Translation           ASUII Setup                66        wellpro Properties      Connect To   settings      Function  arrow  and ctrl keys act as       Terminal keys CO Windows keys          Host System Encoding Method fx         Select Host System Encoding Method        Backspace key sends       ChitH     Del              5 Shift JI5  C2 Standard JIS        EtrH  Space  Ctrl H        E mulation     nsw  Telnet terminal ID  TI Dt      300                     Backscrall buffer lines               Play sound when connecting or disconnecting    Input Translation    ASCII Setup             e Go to Touch Screen and into Manage Files  e Click on    Restore settings from PC       e Go back to Hyperterminal menu on computer and    Transfer    then Click on    Send Text File    and    pick the file to send from    WellPro Backup    folder on desktop               amp  wellpro   HyperTerminal       ence Help    Send File     Receive File               Capture Text      Send Text File                    Capture 
    
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