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InterCatch User Manual Doc1-10

1. UK Scotland Discards R Report SDN_DEF_ gt 120_0_0_all Add selected Add all Remove all Remove selected Group 1 Name of group 1 Unsampled strata in groups No data found m Back Raised Discards page Save group and go to setup Select L D First the user select the raised discards strata which should be grouped meaning using the same landing discards among the all the raised discards which have not already been setup The selected raised discards are marked in the most left column 71 InterCatch User Manual Version 1 9 gt http intercatch ices dk CS Data Discard Layout_of_the_Grouping_of_Raised O BOX ices dk a a Henrik Kjems Nielsen LOG OUT Data handling Overviews InterCatch Misc Change password Last updated 03 May 2013 14 16 45 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme jaas arct_ WG Final __ fg Grouping of Raised Discards Filters for unsampled stratas use shift and ctrl Go to Match Related Landings and Discards Countries MICR ER Seasons F Areas Fleets a Search part of fleet name by keyword 2 IIb SDN_DEF gt 120 0 _0 all fe 4 Country Season Catch cat Report cat Add selected Add all Remove all Remove selected Group 1 SDN group Unsampled strata in Country Season UK Scotland 2012 i SDN_DEF_ gt 120_0_0_all UK Scotland 2012 OTB_DEF_80 99_0_0 UK Scotland 2012 SDN_DEF
2. iTe ed ame a ICES rages CIEM ae Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 jang kas Allocation scheme Alloc For ang kask in 2009 Filter J No comments The datagrid above displays a list of targets strata where data are to be applied to clicking the on a target unfolds the sources Load Latest Practic Close E L T f 1 T nterne Fa R10 4 The screen above shows one line for each of the unsampled catches to which sampled catches need to allocated In the example above there is only one unsampled catches to which sampled catches need to be allocated Click Edit for the unsampled catch you want to set up allocation for The set up of allocations for each of the unsampled catches are stored under the allocation scheme name selected If the stock coordinator want to investigate which effect different set up of allocations have Several allocation schemes can be set up for the same Final dataset or same Trial dataset All the allocations under one allocation scheme could be set up so the different parameters such as country quarter area fleet catch category Catch Landing or Discard have one order of priority and one preferred weighting E g first catch category then quarter area country and finally fleet And if several sampled c
3. 7 r Favorites 3 g Google a amail s2 ICES CIEM ICES SharePoint Mainpage ma InterCatch Mew Prod InterCatch Dev Datras rt oe 2bttpintercatch ices dk ExportFishDatafExportFishD Ap my Page gt Safety Tools gt r m E r See ee p F r e a Ta ef foe Se G Ars Piia ita ICES aes kaiia ae ee 2 InterCatch gt Data handling gt IENA Pays Data handling Overviews Misc JUL SL Data handing ggregate and Export Seen Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Alloc Export of status FINAL data for ang kask in year 2009 a E TT a EET ALL titties A Eiin AL FEFE CPP Ea E E ET TT Lin fmt Al FleetType Fleet Human Bottom trawl Unspec Other Country CatchCategory Sex Plus Group 10 100 F DE L N Seasonlype Season Quarter Export format Low estoft r Survey ALL Final export C Aggregate Export of Files back to top 4 F Iy Done but with errors on page Zz x Internet Fa A100 4 In this page you specify the level of your aggregation The wide top field is just for information showing what is selected The first field FleetType is a filter for the next field Fleet You select the fleets which must be aggregated in the output Then the countries which must be aggregated are selected Most offen
4. All are selected in the fields to aggregate all catch data to the total stock catch The fields must be selected in the order shown on the screen The drop down lists only show codes for which data exist But for Season and Area all 104 InterCatch User Manual Version 1 9 quarters or areas are shown independent of imported data simply to be able to aggregate on a higher level than the imported data After having specified the level of aggregation by the chosen fleets countries etc click the Aggregation button Data are aggregated to the level specified and a SOP value is calculated and shown next to the SOP field see the next page Discards exported separately In the Catch Category list first Landings are selected and the rest of the field are selected then the data is aggregated and exported Then in the Catch Category list the Discards are selected and again data are exported Stock weight WEST If WEST is taken from a specific quarter like 1 or 3 then select Quarter in SeasonType field and select the specific quarter in the Season field and select All where relevant in all other fields and then press Aggregate and then Export 105 InterCatch User Manual Version 1 9 gt http intercatch ices dk ExportFishData ExportFishData aspx Windows Internet Explorer gt http intercatch ices dk ExportFishData ExportFishData aspx t Lx x B
5. Select dataset version E mail address the results will be sent to Submit back to top El Se O te Complete the form as shown on the next page 15 InterCatch User Manual Version 1 9 _ 7 Xx g Google Pir fay gt A E Page Safety Tools me Hindows Internet Explorer GA T http fintercatch ices dki Datsu Screenstep_start aspx a ir Favorites EE E Start screening x 7 Data Centre InterCatch e m Ae a I C E S Hinge ARS SN i d i h 2 i f a et i CIEM Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset_ Not set___ _ Notset_ Notset___ Not set Notset__ Not set Select the data file to screen maximum 6Mb s P DP 1 projects InterCatch TestData 2004 HKN test demo Browse zi wa oouo O In the field Select the data format version select e InterCatch 1 Version for commercial catches and sample data e InterCatch survey and logbook data for survey and logbook data InterCatch works with the commercial catches and sample data all functionalities are related to these data The survey and logbook data is the tuning fleets CPUE aggregated data mean weight in stock WEST and maturity the maturity rate in decimal These data can be imported under the import pages and be
6. WECA 900 1100 for age 4 WECA 900 1100 fo 4 T 4 IN Done but with errors on page xz a A le Internet Fa 100 Z The shown stratas fell outside the specified WECA range checks To see the actual value note the strata or take a screen copy and go to the Transform to Stock in the menu 33 InterCatch User Manual Version 1 9 5 4 Delete Import Data Menu item 4 Delete Import Data pia 10 4 JSF ooge P ktd ti lt Page Safety Tools a a nal ose p a Te ee a ee ee i 7 ee ee a ie te me F i S r i OE CE om ICES Ber Gen CEM E ny a R a E InterCatch gt Data handling gt BRIBES Fe Henrik Kjems Nielsen Data handling Overviews Misc annie Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Select Role and Stock to Delete from Role amp Steck SC ang kask Anglerfish in Division Illa Skagerrak Kattegat Overview of Imported Data to Delete Sample data can only be deleted if a sign exists in the column to the left Fishing Fleet Catch Reporting Species Country Year Season Area Category Category All Delete Catch and Sample De Bottom reported ANF Denmark 2009 Illa Landings nonreported 9 Delete Only Sample Data trawl mer misreported All Delete Catch and Sample De l reported Denmark
7. length Multiple a ae ps prena Report Landing Fleet landing Landing in kg Discard in kg Ratio discard discard cat stratas data stratas exist Age or Landing Landing Landing Landing All reported nonreported and misreported OTB_CRU_70 99_0_0_24 lt 40 25 000 000 000 Weighting Factor All reported OTB_CRU_70 FER E e 2010 EaR 99 0 0 24 lt 40 90 000 000 000 38 600 000 000 0 000 misreported pou E j Comments Weighting Factor at stratum Landing CATON v level by between quarters back to top d amp 100 A comment in the comment field at the left bottom can be written This comment is written in the exported Discard allocation file which document which landings discards was selected to calculate all the raised discards When the raised discard has been set up by selecting the best Landings Discards and the weighing the OK button is pressed and the set up is saved The user is redirected to the Setup Raised Discards page 68 InterCatch User Manual Version 1 9 Henrik Kjems Nielsen LOG OUT Last updated 20 January 2012 15 03 49 Distribution Allocation scheme Data handling InterCatch Misc Change password Working year Data year Stock Assignment WorkingStatus 2011 2010 aas arct wG rial Age Not set Setup Unreported Discards Setup Unreported Disc
8. on a target unfolds the sources Load Latest Practic Close E e T i 100 gt g After clicking the OK button in the set up of allocations the screen above is shown Repeat editing until all the rows have a drop down plus sign marker in the left hand column When pressing the sign the sampled stratas which are allocated to the unsampled catch are shown Load Latest Practice will take the previous years set up of allocations for unsampled catches After having set up all unsampled catches press Close the setup of each unsampled catch have been saved when pressing Ok in the previous screen 97 InterCatch User Manual Version 1 9 5 13 Calculate Distributions from Allocation Scheme Menu item 11 Calculate Distributions from Allocation Scheme After having set up allocations for all unsampled catches under an allocation scheme the catch numbers at age or length CANUM and mean weight in catch at age or length WECA for all unsampled catches must be calculated http intercatch ices dk CS Data ApplyEstimation Process4pplySchemeDialog aspx Windows Internet Explorer ioj x Ga F http fintercatch ices dk C5 Data ApplyEstimation ProcessApplySchemeDialog aspx Ft X m like i am the only girl in the world D we Favorites E htto intercatch ices dkics Data ApplyEstimatian Fr Fy F AE Da e P M gt p aTe Tigi ra a v Ba K Fi ICES kaa
9. t Page Safety Tools D Dk ee ICES Gae CIEM amp Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Det mation Allocation scheme InterCatch gt Data handling gt ME 2010 _ _ oos ang kask WG Fna All Please select strata for the AllocsGon Stock ang kask Year 2009 Quarter All i Area All Fleet All Y clear ox Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved a a tere a Rime After selecting an allocation scheme you will see the screen above when entering the 10 Setup or Check Allocation Schemes This screen is just a filter Here you select which part of all the unsampled catches you want to see and set up allocations for in the next screen Leave the default All in all the dropdown lists and click OK to see all the unsampled catches If you do not see and set up All the unsampled catches in the first go these will have to be selected in a second round 82 InterCatch User Manual Version 1 9 fintercatch ices dk CS Data ApplyEstimation ApplySchemeReport aspx 7intSeason Okinthrea O0 amp Windows Internet Ex lor http er http intercatch ices dkiC5 Data applyEstimation ApplySchemeRepork asp ri hea x g Google Pie o m F bias qi Favorites 1S Google a Gmai
10. 2 When clicking the sign a sub table appears which shows the history of catch revisions for the strata The previous CATON value is shown together with the name of the person who changed it and the date and time of the change If the revised catch have sample data another sign is shown next to history record When pressing the sign a sub table appears which shows the calculated revised CANUM values for each distribution unit age or length 55 InterCatch User Manual Version 1 9 5 10 Raised Discards Raised Discards only raises calculate the discard weight at this stage The discards age or length distribution is allocated in menu 11 Setup or Check Allocation scheme ust like for landings and calculated in menu 12 Calculated Distribution from Allocation Scheme Raised Discards are done from the menu 10 Raised Discards A stock and year must be selected first no allocation scheme is needed The Raised discards functionality must be understood before it is used Using discards in InterCatch can be done in two ways 1 Only a few imported discards and no other discards are to be used 2 With discards for all strata imported discards where data is sampled and raised calculated discards weights for all other strata where discards are not imported In case 1 the menu item 10 Raised Discards should not be used In case 2 the Setup Raised Discards should be used because InterCat
11. 2009 Landings nonreported 9 Delete Only Sample Data and misreported All Delete Catch and Sample De reported Denmark 2009 Illa Other Landings nonreported 9 Delete Only Sample Data a misreported All Delete Catch and Sample De ii reported l mee ANF Denmark 2009 a PN Illa Other Landings nonreported 9 Delete Only Sample Data eed a s aff Close back to top Ei CCC Omm a s Wrong imported data can be deleted By wrong data is meant data which cannot just be overwritten by the right catch data E g catch data for a wrong species or country which does not have any catches in that area or quarter That is data which cannot be overwritten by the correct data because that country or fleet does not have any catches in that area or quarter or for that catch category The Data submitter or Stock coordinator can delete the wrongly imported data In the Role amp Stock dropdown box the user can select which role and stock the user want to view data for Normally the user is either Data submitter or 34 InterCatch User Manual Version 1 9 Stock coordinator for one stock But it could be that the user is Data submitter for two stocks and Stock coordinator for a third stock in that case all three combinations of roles and stocks are listed This helps the user to view only the imported data for the stock to which there was a wrongly imported catch data If a small button with a plus
12. Show Fleets Used for Selected Stock Here the Data submitters can select the stock they want to import and then a list of all the Fleets which at this time have been referred to by acatch This means that if nobody has related a catch to a just created Fleet the Data submitters will not see it in the list until the first time somebody have imported a catch which is referring to the new fleet Therefore if a Fleet is not found under the stock then select All Fleets in the dropdown box if the fleet does not appear here the fleet needs to be created 12 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data FleetMaintenance FleetMaintenanceForm aspx Windows Internet Explorer Ioj x ka EA F E http intercatch ices dk CS Data FleetMaintenance FleetMaintenanceForm x D Google Pa al Sar Favorites E http Hintercatch ices dk iCcs Data FleetMaintenance a pe e re lt ha e te Be A A 1e CIEM d wa iy Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 3st updated Friday January 28 2011 11 52 28 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Not set Notset___ Not set__ Not set Fleet Add or Update Only Stock Coordinators can insert or update and delete their own fleets Fleet Name Enter a fleet metier name Description Clear Selection Update Selected Fleet
13. When more than one Landings Discards stratum have been selected the weighting factor has to be selected Select the field which should be used as weighing factor from the list shown when clicking the Weighing Factor field In the page above Landing CATON is selected The standard is to let the selected Landings Discards be weighted by the Landings CATON landings catch this is all so the default 67 InterCatch User Manual Version 1 9 Henrik Kjems Nielsen LOG OUT Data handling InterCatch Misc Change password Last updated 20 January 2012 15 05 55 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 aas arct WG rial Age Not set a Select Landings Discards for Unreported Discard For Unreported Go to Match Related Landings and Discards Discard Country Year Season Available Landings Discards Fleet Catch kg OTB_CRU_90 119_0_0_all Catch cat Report cat Filter for available landings shown use shift and ctrl Choose fileter UK Scotland Seasons Areas Fleets 0 es parameters Countries Landing Multiple Discard in Discard mgth Multiple Discard p Report Landing Fleet landing Landing in kg discard discard Country Year Season Area cnt lt irate kg Ratio dette Jee Country exist UK UK 4 TT dd selected dd all Remove all Remove selected Age or Landing Multiple Sa af Saaai
14. samples catedory category m xd Tkg Of read meas Age Length 2009 4 mua Mia Other LUnsnerlI andinas All oe Selected strata Sampled No f No amp weiatinatactar SATON catch in Age Length Tkg ET meas WeightingFactor tear E Catch eee Season Are category category Country Y m 2009 1 qua ry Humant Landings Pe arg ea 1496 1496 1483425 7852 DK 2009 2 qua Ia Bottom ae All 1170 1170 R 4 Comments No comments Weighting manual algorithm Change weighting factor for checked selected strata Add Cancel ok CT inemet a Rom If you want to weight each of the sampled catches equally independent of CATON or sample data then Manual weighting should be used Select Weighting algorithm Manual and check mark all stratas and enter 1 in the Change weighting factor for checked selected strata and press Add It is possible to change the weighting factor for a selection of the sampled catches You can weigh one or several of the sampled catches to be weighted twice as much for instance To do this select the data categories by checking them in the left hand column for which you want to change the weighting factor then Change weighting factor When you press Add you can see the updated weighting factor in the right hand column using the scroll bar When the weighting is set yo
15. 1 No Age Read Netherlands 4 luarter lld Test 1722 Germany 4 Ciuarter ila Testa BULL 4 4 Ah AllocationsAndCatchData lt li Ready MUM The AllocationsAndCatchData explains how the allocations were done see above where the text AllocationsAndCatchData file which is tabulator delimited is opened directly in a spreadsheet 108 InterCatch User Manual Version 1 9 The CatchAndSampleDataTables txt file is from 2008 and includes 4 tables Two tables for the working group report and 2 other tables which can be used as pivot tables for examining the data Sample data per country and area for the WG report CANUM WECA and length data per age or length for each area and quarter for the WG report 3 List of catches for all imported stratas no age or length specific data for pivot tables for data examination 4 List of all imported catches data with sample data for each age or length for pivot tables for data examination NO In the following the examples of the four different tables in the file are shown The file is as the AllocationsAndCatchData file tabulator delimited and can therefore be opened directly in a spreadsheet E Microsoft Excel CatchAndSampleD atal ables xls TBR JE File Edit wiew Insert Format Tools Data Window Help SD A Sh ae ms AL a 100 ate 7 i A My AL leh PY Reply with Changes End Review B 19022008 11 25 04 Reporting Misreporte Catch sampled Official No
16. 224 Catch Numbers at Age by Area es ee 226 For Period 1 eer Aqes Illa aE a Kii Kir Fila Total 224 0 0 0 0 0 0 0 0 1 9444000 0 0 Top000 1982764 0 ae fb 2 7 126408 7907213 495638 1170658 3320535 O 124495044 232 3 BOOZOOO 46205959 41916465 5713411 191585349 42647030 160871242 4 3112000 22527196 35645326 4634394 2907357 9314729 034002 5 757 9000 386094687 37909530 5054181 4360522 7917105 100915225 0 B 1214000 13707541 3649057 490152 1744209 5123042 259286001 7o 1r6g000 5630966 4702941 p25469 0 2320977 18277353 o 635000 18645372 1192682 1186370 291044 232097 r bb 1445 d O 439000 96000 0 0 0 S535000 240 241 Mean Weight at Age by Area fin gram DAZ 2435 For Period 1 PENI Ages Illa aE ay Ib WC Ild Total 246 0 0 0 0 0 0 O Mahl 1 17 0 0 2d 2a O 19 72012009 2 be fog 136 39A 34 9 O be 45495290 249 3 ga 105 6 112 112 od fb 96 56460927 4 132 139 9 133 1 133 107 106 130 8147851 5 147 143 7 144 2 ES 111 118 140 7214506 z 167 155 1 161 1 161 118 160 156 671591 i 1867 169 7 171 1 171 0 143 168 3955309 g VF 182 186 9 186 125 173 176 6802947 4 0 182 191 0 0 0 153 6149533 25r 250 Mean Length at Age by Area fin mmj 299 260 For Period 1 261 Aqes Illa aE ay Kii Kir lla Total 253 0 0 0 0 0 0 O MaN 1 0 0 0 175 0 OU 11 396767 54 2 0 2A 2 46 164 9 35 6 0 16 02508 155 3 0 251 257 4 0 226 4 1869 3 215 0209262 4 0 apo 2
17. 7 gt http Jintercatch ices dk c5 Data ApplyEstimation Ap fag A n Page Safety Tools ICES CTEM Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 ang kask WG _ Final Age Aloe Cs Select Allocation Sources Country Year Year wear season Season lee Area vel Fleet Fleet type Jere Sse Catch category Report category Report category y CATON eee ae Usage wale Depth R Depth R Area Country Season Catch Category Fleet Filter Available strata T only Area IIIa M only DK only 3 qua Quarter l only Landings only Other Sampled No No No No Country Year Season Area Fleet a Report CATO CATON catch in Age Length samples samples EEEE type Seer eee eae Tkq read meas Age Length T DE 2009 4 qua Ta Other Unsnec andinas All ona 4 a L d Remove Selected strata Sampled pa Catch Report caton Country oi o Fleet i WeightingFactor catch in Leng Soe category o T kg p meas 2009 2 qua Illa Bottom HumanC Landings All 1170 1170 Ra Comments No comments Weighting CATON algorithm Cancel Ok HTT iene a te 5 Now the two marked sampled strata from Available strata see previous screen are now under Selected strata which are th
18. Data year Stock Assignment WorkingStatus Distribution Allocation scheme Not set Notset __ Notset_ Notset _ Notset Notset _ Notset Assessment Year z 2010 Ea Assignment WG Data year Stock Distribution Status Created by Henrik Kjems Nielsen Creste back to top Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved Ei COS a A Atom Fill in the fields Assignment must always be WG for working group Press Create to create the record Which now makes it possible for the stock coordinator to select the just created Stock and Year 38 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data WorkingSpace Manage4ssignment aspx Assignmentid 13 amp Status Ope Windows Internet Explor ap olx T http ffintercatch ices dk C5 Data WorkingSpace ManageAssignment aspx 4 T X B Google Pp p mr Ci a qip Favorites Sale bttp intercatch ices x data Centre InterCatch ai z Page Safety Tools k ICES CIEM Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset ss Notset Not set__ Not set Not set Notset Stock and Year Assessment Year e 2006 Assignment WG Data year e 2005 Stock z smr arct Distribution Age Status g Open Created by a Henrik Kjems
19. Enter a fleet metier detailed description Stock ae 1 Commercial Fn al E Coordinator Andrew Campbell Fleet True Commercial Fleet Unit Effort Fishing days Fleet Type Human consumption Gear Class Gear Group Ei ie E Eae Hooks and lines LZLX M esh Size SY T Ci ae Nets L2GN Min a ea Seimes L25X oe Selectivity Traps L2FIX amie insti Trawls L2TX Mesh Size s Other gear L2NK Min Vessel Dredges L2DR Length Vessel Type Range Vessel Vessel Tonnage Min TT Tonmage O Max oe id Min Max Fleet List 4 IN Done but with errors on page m i z le Internet EF 100 g When creating a fleet not all fields have to be filled in only the following mandatory fields must be filled in Fleet Name Description Stock Coordinator Commercial Fleet Unit Effort and Fleet Type If a newly created fleet have not been referred to by any imported catches then the stock coordinator can update any field or delete the fleet When a fleet have been referred to by just a single catch the fleet cannot be deleted and only optional fields can be updated changed The stock coordinator who creates a fleet is the owner of that fleet this means that if the fleet is used by several stocks other stock coordinators which also use refer to this fleet cannot update change the optional fields Only the stock coordinator who created the fleet can do that InterCatch User Manu
20. GA 7 http fintercatch ices dk C5 Data 4pplyEstimation 4pplyRuleSetEditor aspx 4 X a Google Pl 7 qip Favorites r a Google a amail s ICES CIEM ICES SharePoint Mainpage ae InterCatch New Prod ae InterCatch Dey Datras 7 http intercatch ices dk C5 Data ApplyEstimation Ap Fi O n Pages Safety Tools et oe a a tt a Fooi mp ari tt re F E F k t Tal a i He E k egi ey CIEM ae Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 009 ang kask WG Fina Mg Select Allocation Sources Country Year Season Area Fleet Fleet typ e Catch category Report category CATON Usage e Quality A DK 2009 3qua Mla Other Unspec Landings Al 500000 NA Na Na Area Country Season Catch Category Fleet Filter Available strata E Only Area IIIa z Only DK E Only 3 qua Quarter E Only Landings E Only Other CATON Sampled No No No No catch in Age o samples sample Tkg read meas Age Length Fleet Catch Report type category category Humant Country Year Season Area Fleet Bottom re po tan E trawl rar mes es 2009 4 qua Ula Other Unsner andinas All 906 hg ay a R Selected strata emove No selected sources for the current target Comments No comments Weighting CATON a
21. Google P a 2 qi Favorites 5 g Google a amail s ICES CIEM ICES SharePoint Mainpage InterCatch New Prod m InterCatch Dev Datras bttp intercatch ices dk ExportFishData ExportFishD fap lt m Page Safety Tools InterCatch gt Data handling gt PERE lene e tin See Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 _ ang kask_ wG Final SC Cle Export of status FINAL data for ang kask in year 2009 Data handling Overviews Misc IntExportLog created 1200 FleetType Fleet Bottom trawl Other Country CatchCategory Sex DK L N Seasont E Season Quarter a 1 2 3 hd Export format Lowestoft m Survey ALL Final export O ang kask ALL zip Aggregate Export of Files back to top 4 Iy Done but with errors on page o z m j z x e Internet Fa 100 4 If the SOP value is acceptable you can export the stock CATON CANUM WECA the allocation files two if discards are used and the Catch and Sample data tables by clicking Export of Files Then a hyper link is showing a zip file with the same name as the stock code and the selected areas and the date and time Left click on the hyper link and select the option Save as and save the zip file on you local workstation 106 InterCatch User Manual Version 1 9 This zip file contains the fo
22. Title Description WECA 800 880 for age 3 WECA 800 880 for age 3 WECA 900 1100 for age 4 WECA 900 1100 for age 4 m STs TT nts a RR tt0 The result of the executed Check Set shows that for both checks the one for age 3 and also for age 4 both had stratas which fell outside the specified WECA ranges Press the sign for each of the checks to see the stratas 32 InterCatch User Manual Version 1 9 A hittni intercatch ices dk CS Data Advanced alidation CheckSet frmExecuteResults aspx Windows Internet Explorer i l i zZ oj x ea Google Pp D y E http intercatch ices dk C5 Data advancedyalidation CheckSet frmExecuter m ka ww Favorites E http Winkercatch ices dkics DatalAdvancedyalidation ICES CIEM Daa haning OVS vets Mer Change paewai a ee Prue January 28 2011 11 25 26 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset_ Notset Not set Not set Not set Not set Not set Results of executing check set Check Set Name Ang in IIIa WECA check for age 3 and 4 Description Ang in Illa WECA check for age 3 and 4 Below checks did not pass validation Expanding a check will display the failed data Title Descriptiorfy WECA 800 880 for age 3 WECA 800 880 for Below data did not pass validation Country r FleetName SeasonType Season FishingArea DepthRange CatchCategory Stock Spec
23. We Favorites E htto Winkercatch ices dkics DatalFleetMaintenancel Range F Vessel Vessel Tonnage Min o Tonma Max ee Min Max Fleet List True onc ae Bottom Otter u View Update Delete otp cep per Pottom otter I Quincoces a ern spree ssi oe trawl Mixed Poe risa i caiat View Update Delete OTB cRUsT _ Bottom otter trawl I Quincoces ieee Humant sa at OTE Crustaceans dio FI a ot i IES 2 Bottom otter trawl Seen ae F EN xen Update Delete OTB CRUST DEF OTB Mixed I Quincoces eee Humant View Update Delete OTB DEF Bottom otter trawl I Quincoces Paine NA Humant 3 cs OTB Demersal ik Flack en Bottom otter trawl True View Update Delete OTB DWS DEF I Atal nied I Quincoces Commercial NA Humant OTB Mixed Fleet z Othe True view Update Delete Other jaia Ole Henrik Skov Commercial fd Unsper Fleet z Other gears Tone s view Update Delete OtherGears Colm Lordan Commercial NA Humant Fleet View Update Delete other shrim Small fresh fish Sigbj rn Mehl Ed hf Humant i 1P trawlers in near ARANE a Flect i oo View Update Delete Celtic Sea herring Afra Egan eia Humani fleet boats ina Fleet i mga i z gt Close F A Done but with errors on page TIITII Internet Fa 100 Z A fleet is checked by entering the Fleet Maintenance screen when first entered the screen is empty In the middle there is a dropdown box
24. o mar G CIEM E aera a _ Oo Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password Last updated Thursday January 27 2011 1 27 18 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 Allocation 1 Calculate Distribution based on selected Allocation Scheme You are about to calculate the distribution for the unsampled catches based on the selected Allocation scheme Allocation 1 This allocation scheme is working on the stock aas arct from Final This could take a minute Continue i 4 F Done zz ie Internet 5 100 g Check that you have selected the right Allocation scheme then click Yes The catch numbers at age or length CANUM and mean weight in catch at age or length WECA for all unsampled catches are now being calculated To change the Allocation scheme press No and select the right and Change Stock and Year If you have forgotten to set up allocations for one or more unsampled catches you will see a message This allocation scheme does not cover all catches Return to Set up apply methods to fix this You should return to the Setup or Check Allocation schemes and complete the allocations for all unsampled catches 98 InterCatch User Manual Version 1 9 S http intercatch ices dk CS Data ApplyEstimation ApplyResultStatus aspx Finalized
25. of leng Mo No of age No category category area to frar Catch Catch samples measured samples aged Denmark Catch All report 45120000 47472 40120000 4b 6035 46 1280 France Landings Reported 10941000 O 10941000 0 0 0 0 Germany Catch Reported z 15514000 15514 12939000 20 11924 20 1155 Germany Landings Reported 4620000 0 4620000 0 0 0 0 Metherlands Catch All report 60319000 603195 43565000 109 13153 109 Zi 25 Netherlands Landings All report 2366000 0 311000 0 0 0 0 Catch Reported 36119000 36119 36119000 13 1207 13 1196 Landings Reported 2178000 0 21 8000 0 0 0 UK England Landings Reported 13480000 O 13460000 0 0 0 Uk tNorthern Ireland Landings Reported 656000 0 2656000 0 0 0 UKScotland Discards Reported 13219000 13219 0 g g Uk Scotland Landings Reported 53312000 53312 43450000 ob ob 262052000 225955 213427000 291 Total Discards 13219000 Total Misreported 0 5 Moa o o Sheets f Sheet4 f Pivot DataDetailed 5 Catch ndSampleDataTables Ready Sample data per country and area for the WG report in the 1 part of the CatchAndSampleDataTables txt file 109 InterCatch User Manual Version 1 9 EJ Microsoft Excel CatchAndS ampleDatalT ables xls TBS 69 File Edit Yiew Insert Format Tools Data Window Help Type a question for help X Se GaaS a a E M a 100 10 E ee a wi a i Reply with Changes End Review fe A U2 4008 11 25 04 B D E F KW p EEr a r E TES Ad ka
26. sign is shown to most the left of a catch data line that indicate that the catch has been sampled and therefore that there are age or length distributed composition data Where there is no small button with a plus sign there is only a catch CATON For each catch line there are two buttons Delete Catch and Sample Data and Delete Only Sample Data If the button Delete Only Sample Data is pressed for data line with only a catch a message at the top saying no sample data attached Remember to only use Delete Catch and Sample Data for data which cannot be overwritten by the correct catch data This is important because the Data submitters and Stock coordinators should only use this screen when data cannot be overwritten to reduce the chance of deleting by mistake Deleting a catch or sample data are not actually deleting data the screen only marks all data belonging to this specific catch as deleted and the data will not be used any further by InterCatch If the Stock coordinator believes that the sample data for a specific catch are so bad that it is better to remove the sample data from the catch and then allocate other sample data to the catch Then the Stock coordinator can press the button Delete Only Sample Data 35 InterCatch User Manual Version 1 9 5 5 Check Stock Areas Menu item 5 Check Stock Areas http intercatch ices dk CS Data Reports StrataDefinitionStockLi
27. 2 Co d p PE ig L f F i ae ri a DA i F 7 ae gl Pik ane r i i j T r i F F i f i i i F La r j A ety 4 a z 5 er gt a ClEM uaa ae ee ke a Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 2st undated Wednesday June 01 2011 2 35 10 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme jot set 2011 2010 bll 2232 G The selected stock has no age or length distribution data in the database Or there are unsampled catches for which allocations have not been set up PLEASE SET UP ALLOCATIONS FOR ALL UNSAMPLED CATHCES if the stock is age or length distributed tt could be that no catches with age or length data have been imported at this point If this is a stock for which there mainly is only catches and afew samples not used for allocations please click Ok to export the catches landings Search the site Contact Us Disclaimer Feedback Copyright ICES 2011 All Rights Reserved 4 iN Done i E i m Internet Fa 100 4 Save the data from the link 103 InterCatch User Manual Version 1 9 Returning to the stocks with an age or length distribution for all catches D http intercatch ices dkExportFishData ExportFishData aspx Windows Internet Explorer ol x E a Y http intercatch ices dk ExportFishData ExportFishData aspx Xx a Google Pp z
28. ES pe CATON Sampled No No No No Fleet Catch Report a Year Season Area Fleet catch in Age Length samples sample type satesory category Tkg meas Age Length S eee al aae Toe so sam a ERM cian a ts elo a Fo soe mi i 27009 4 nua al Other Unsnerc feo gA Selected strata emove No selected sources for the current target Comments No comments Weighting CATON algorithm Cancel OK TIIT B Internet Fa gt 100 4 After clicking Edit for a specific unsampled catch on the previous page the following screen appears On the very top you see the properties or parameters for the unsampled catch you selected under the header For In the Available strata list you see all the catches which have sample data also referred to as having an age or length distribution A selection of the Available strata can be used in the Selected strata In the Selected strata allocation list you see all the catches strata which you have added selected to be allocated for the unsampled catch at the top The first time you enter this page the Selected strata is empty because you have not selected any sampled catches strata yet 85 InterCatch User Manual Version 1 9 O http intercatch ices dk CS Data ApplyEstimation ApplyRuleSetEditor aspx intlargetid 167f4e amp int Windows Interne t Expl o x
29. Overviews InterCatch Misc Change password Last updated 03 May 2013 13 39 32 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme ad Discard data have been imported and extracted do you want to continue and create all the missing discard data Create Unreported Discard Data International Council for the Exploration of the Sea ICES Conseil International pour l Exploration de la Mer CIEM ICES Secretariat H C Andersens Boulevard 44 46 DK 1553 Copenhagen Denmark Tel 45 3338 6700 Fax 45 3393 4215 info ices dk Disclaimer ICES All Rights Reserved lt If the user clicks the button Create Raised Discard data InterCatch will automatically create a discard stratum for each landing stratum where there is no matching discard stratum data By matching stratum the following fields have to be the same country year area temporal extent e g quarter fleet metier and reporting category 57 InterCatch User Manual Version 1 9 Data handling Overviews InterCatch Misc Change password Working year Data year 2013 L D setups 2012 Raised Discards No L D Group Group setups number name amp X f InterCatch 10 Raise Discards X MARINE DATA Henrik Kjems Nielsen LOG OUT Last updated 03 May 2013 13 39 32 Stock Assignment WorkingStatus Distribution Allocation scheme aas arct WG Final __ fg an JCal SELES END Catch Report W
30. Samples No e cat cat e a Catch Catch i Length Sample Sample mara Meas Age Length All we reported i OTB_CRU_ 70 iL es retin 2010 Discards igita 99 0 0 24 lt 40 38 600 000 misreported Match marked landings and discards Unmatch marked Landings Discards Automaticall matched Landings Discards Country Year Season Area Caton Landing Landing z 2 gt Landing Landing Report Landing Fleet Landing Discard Discard Discard Discard Catch Report Discard Fleet Country Caton Country Go to Discard Allocation Go to overview of Unreported Discards back to top R100 v The Match related Landings and Discards page consist of 3 grids tables The top grid shows all the imported Available Landings strata The grid in the middle shows all the imported Available Discards strata The bottom grid shows all Automatically and manually matched Landings Discards The automatically matched landing and discard are matched related on an individual stratum basis Where the country season area fleet metier and reporting category are identical to be able to be representative for a ratio between a landing weight and a discard weight So a landing discard ratio for the given stratum can be calculated and used for further raising for Raised Discards 59 InterCatch User Manual Version 1 9 intercatch ices dk CS Data Discard MatchingLandingsAndDis
31. The very first time the Edit or the Go to Group setup button is pressed and until the first discard allocation have been set up the user is redirected to the Match related Landing and Discards page All the landing and discards which are related have to be matched before proceeding 58 InterCatch User Manual Version 1 9 iG lt E http intercatch ices dk CS Data Discard MatchingLandingsAndDiscards aspx Stt O BG X ices dk UU Ys 22s Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 _______laas arct_ JWG Trial Jage __ Not sett Match related Landings and Discards Available landings Filter for available landings shown use shift and ctrl Countries 5 11 i Seasons 1 Areas Fleets Bottom trawl UK Scotland 4 OTB_CRU 70 99 0 0 24 lt 40 OTB_CRU_90 119_0_0_all 2 Se atin p Landings Landings Landings Samples No Age All reported a OTB_CRU_70 Landings rga 99_0_0_24 lt 40 43 000 000 misreported All reported OTB_CRU_70 Landings didi 99 0 0 24 lt 40 90 000 000 misreported m Available Discards Filter for available discards shown use shift and ctrl Choose filter UK Scotland Seasons Areas Fleets e s Ihe 0 mete e cet paramters Countries Age or length Landings Discards Discards neni ai yee Catch nopot for Samples
32. Version 1 9 6 Overviews 6 1 Area list Under main menu item Overviews Area list E 2 http intercatch ices dkiCS Data ReportsiStrakaDefinition reaList aspx ir Favorites E http Winkercatch ices dkicSi Data ReportsiStrataDefi ICES CIEM Data handling Overviews Misc Working year Data year Stock Assignment WorkingStatus 2010 2009 ang kask wG Final Area list http intercatch ices dk C5 Data Reports StrataDefinitionAreaList aspx Windows Internet Explorer 9 x RJ cooo BI x ej O j mm Page Safety Tools InterCatch gt Overviews gt Henrik Kjems Nielsen Log out Distribution Allocation scheme Age Notset Not Set Not Set Not Set ard Barents Sea FAQareazs Not Set I Norwegian Sea Spitzbergen amp Bear Island FAQarea2 7 II Including Division Ila west of 5 degrees W II a IlaX Excluding Division Ila west of 5 degrees W efes E boi Central North Sea Central North Sea Central North Sea Area Top Level Barents Sea Area Top Level Norwegian Sea Spitzbergen amp Bear Islan Norwegian Sea Norwegian Sea Spitzbergen and Bear Island Sa Norwegian Sea Spitzbergen amp Bear Islan Ill Skagerak Kattegat Sound Belt amp Baltic Sea Area Top Level Skagerak Kattegat Sound Belt amp Baltic Se Skagerrak and Kattegat East Kattegat and Skager
33. a i a rz ir EA ates a l f h A Cag z E z InterCatch gt Data handling gt AEREA Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset____ iiNotset___JNot set__Not set Notset____ _ Notset___ Not set Existing Stock and Year 2009 2008 Maria Zarecki we aT e Close Add new back to top SEEE NEE a CCC Orme a ROO Before selecting the stock and current year for which the stock coordinator want to work the current Stock and Year have to be created That can be done by pressing the Add new When an assessment have been through a review and there is no changes to imported data or allocation setup the stock coordinator must close the Stock and Year so no changes can be made by accident That is done by pressing Edit next to the Stock and Year which should be closed 37 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data WorkingSpace ManageAssignment aspx Assignmentid 1 Windows Internet Explorer l lel Al T httpijfintercatch ices dk C5 Data WorkingSpace ManageAssignment aspx 4 T bea x B Google P 5 gt qip Favorites Sale http intercatch ices x data Centre InterCatch ai z a Page Safety Tools k ICES CIEM Data handling Overviews Misc Log out Working year
34. any number of times to check what catch data have been imported so far The stock coordinator should press this button regularly to see when all catch data for the specific stock have been imported When all data have been imported the data should be finalised 46 InterCatch User Manual Version 1 9 gt http intercatch ices dk CS Data StockTransformation StockTransformationIndex aspx binUpdateLe Windows Internet Explorer jo x yF http ffintercatch ices dk C5 Data StockTransformation StackTransFarmationInde X a Google lr 7 qip Favorites 5a a Google a amail ICES CIEM ICES SharePoint Mainpage InterCatch New Prod InterCatch Dev Datras E https fintercatch ices dk C5 Data StockTransformatia Ai s mm Page Safety Tools h a pm S tre ing it Aae ala Ars D ICES K EN CEM Saree InterCatch gt Data handling gt AERE Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 ng kask_ WG Mma Csi __ id Noot eet Data handling Overviews Misc Extract stock data from imported species data Below is a SNAPSHOT of imported and transformed data LAST TIME the Extract button was pressed Please press Extract to also see new imported catch data Status Trial and Final are independent datasets But when all data have been imported the whole Trial catch
35. dataset should be Fimalised Stock Status Creation date ang kask Trial 1 27 2010 14 41 View Please press the Extract button every time you enter InterCatch until all catch data have been imported Pressing the Extract button will make InterCatch extract all Imported catches So you will see all previous catch data you see now plus eventually new imported catch data So by pressing the Extract button you can check if new catches have been imported since last time you pressed the Extract button This page is the overview of imported catches So to find out what have been imported until now you have to press the Extract button By pressing the Extract button you transform the imported species catches to stock catches The Extract button can be pressed any number of times So new catch data will be added to previous the overview Continuing will overwrite the trial data The allocation schemes connected to the trial dataset will be lost To prevent this you should finalize first Continue and overwrite trial data El Here you decide whether you want to overwrite your trial data set If you do not want to overwrite press Cancel It is not possible to extract imported data directly into the Final Stock and Year After the screen above the details of all the imported data are shown see 3 screens before with the header text Selected stock data The user 1s again asked if the user wants to keep
36. exported under the export page No handling manipulation of these data are done in InterCatch the data is purely imported to complete the stock assessment documentation Press Submit When the uploading is completed the next page will appear on your screen 16 InterCatch User Manual Version 1 9 te summary Windows Internet Explorer D http fintercatch ices dk Datsu Screenstep_FileSurnmary aspx r 4 x x B Google e ZE 7 qp Favorites zE File summary x B Data Centre InterCatch j C Page Safety Tools j PENE ar TA PORNA S eo Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme File name Ang Kask Denmark 2005 csv File delimiter Survey InterCatch 1 Version Quarter Quarter Country DK Monitoring year 2005 Error limits 100 Data submitter s e mail henrikkn ices dk Note Submitting the file to the ICES server may take some time This will depend on the size of the file the speed of your connection and other internet traffic on the ICES server back to top E Iy Done but with errors on page ce a le Internet Er 100 A Press SCREEN DATAFILE FOR ERRORS 17 InterCatch User Manual Version 1 9 fe summary 4indows Internet Explorer X go http fintercatch ices dk Datsu Screenstep_FileSur
37. i Done L 0 ff LT internet Fa H100 4 Only data from Stock and Year Final can be exported therefore you are redirected to 7 Set Stock and Year Workingspace so you can select the Final dataset under the relevant Stock and Year If the calculated distribution data you want to use and export are in status Trial then Finilaze the dataset in 12 View Calculated Distributions the calculations of the CANUM and WECA for unsampled catches Landings only 102 InterCatch User Manual Version 1 9 Some stocks only have landings data no sample data or very few samples which are not allocated to other strata InterCatch automatically detect if a stock should be seen as a landings only stock or a stock with age or length distributions for all strata If just one strata do not have an age or length distributions then the stock is exported as a landings only stock see the screen below f gt http intercatch ices dk ExportFishData LandingOnlyExport aspx Windows Internet Explorer z o x D E http fintercatch ices dk ExportFishbata LandingOnlyExport aspx 44 X D dsb First pe ie cy Favorites 33 mal EA om Yamal Google MBice ice Bin E tes Elom N Tyc E Get 7 z Se le bttp inte x 2 QXL dk S g Trafikinformati dba Find bil oplade fap ad A f Pagers Safety Tools SF a As F Pa ii z a
38. queries regarding this User Manual can be made to InterCatch Project Manager Henrik Kyjems Nielsen henrikkn ices dk or InterCatch Data Officer Anna Osypchuk anna osypchuk ices dk Information and access InterCatch is a web based application that can be accessed from http intercatch ices dk login aspx The client requirement is an up to date internet browser The InterCatch web page can only be accessed by users that are set up as users of InterCatch Only catch data files which in the InterCatch Exchange Format can be imported A description of the format can be downloaded from http www ices dk InterCatch 3 Essential concepts in InterCatch It is important to understand that in InterCatch there are two basic concepts o Stock and Year o Allocation scheme Beside these two essential concepts it is important to know that InterCatch can handle both age and length composition data for a stock The stock coordinator determined if the imported sampled catch data should be with age or length composition But there are no age length keys in InterCatch this means that data cannot be converted from e g length data to age data The conversion from length data to age data using age length keys have to be done before data are imported into InterCatch 3 1 Stock and Year Trial or Final An imported dataset can either by the user be set to be a Trial or a Final status The user has to at all times to s
39. selected Discards 4 t t Age or Landing Multiple Sim a ii ot length Multiple Weighti Report Landing Fleet landing aay a discard discard ae Gks Landing in kg Discard in kg Ratio Js lana Factor exist Landing Landing Landing Landing Country Year Season Area UK e Scotland 2010 4 Comments Weighting Factor at stratum Landing CATON 7 All reported nonreported and misreported OTB_CRU_70 99_0_0_24 lt 40 90 000 000 000 38 600 000 000 90 000 000 mW b level by ok back to top R100 v The screen is divided into 3 parts p For Raised Discard the stratum which is being set up 2 Available Landings Discards on which the calculation of the raised discards catch can be based 3 Selected allocated Landings Discards strata on which the calculation of the raised discard s catch will be based In the right upper corner there is a button Go to Match Related Landings and Discards which direct the user to the Match related Landings and Discards page so the user at any time can check the landing discard matches made All landing discard matches should have been done at this point so all the matched landings discards are available for all the raised discards 65 InterCatch User Manual Version 1 9 Under the Available Landings Discards there is a filter for the strata shown in the Available Landings
40. spring spawning herring her noss HER II Norwegian spring spawning herring Norwegian spring spawning herring her noss HER Vb Norwegian spring spawning herring Norwegian spring spawning herring her noss HER aX Norwegian spring spawning herring her noss HER Hal Norwegian spring spawning herring sae wigs ae TT item A mea It is important that the stock coordinator check the Stock Areas for the stocks used In the list all combinations of species and areas which define the stocks are shown It is important that all areas for at stock is in the list Because the Extract and View Imported Stock Year Data uses this list to extract all combinations of imported species and areas to include in the stock data So if an area 1S missing imported catches for that area will not be included in the stock data for further work in InterCatch If an area is missing or a wrong area is set up for a stock please contact the ICES Secretariat 36 InterCatch User Manual Version 1 9 5 6 Create and Close Stock and Year Menu item 6 Create and Close Stock and Year http intercatch ices dk CS Data WorkingSpace AssignmentList aspx Windows Internet Explorer E O jx ae http fintercatch ices dk C5 Data WorkingSpace AssignmentList aspx T x Google ps z qip Favorites aa bttp jintercatch ices x data Centre InterCatch ai E Page Safety Tools r g 7 gt we ht 7 i
41. the relevant landing discard ratios for the raised discards catches by pressing the button Go to Select L D for raised Discard or Go to Group Setup if coming from Group Setup See the following page 64 InterCatch User Manual Version 1 9 Es fk amp X untitled Page TA A L Data handling InterCatch Misc Change password ee ee aes Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 aas arct JWG rial Age Not set Select Landings Discards for Unreported Discard For Unreported Go to Match Related Landings and Discards Discard Country Year Season Available Landings Fleet OTB_CRU_90 119_0_0_all Catch cat Catch kg Report cat Area Discards Filter for available landings shown use shift and ctrl Choose fileter UK Scotland Seasons Areas Fleets pRa UA eel parameters Countries mW Age or length Multiple discard discard data stratas exist Landing Multiple Report Landing Fleet landing Landing in kg cat stratas Discard D Country Discard in Discard kg Ratio Landing Landing Landing Landing Country Year Season Area All reported UK OTB_CRU_70 UK Scotland 2010 1 sala gg 99 00 24 lt 40 25 000 000 000 4 440 000 000 0 178 Scotland misreported 4 w selected Add all Remove all Remove
42. which can be used as a pivot tables for data examination in the 3 part of the CatchAndSampleDataTables txt file B Microsoft Excel CATON check ok_xls JE File Edit Wiew Insert Format Tools Data Window Help TEREA Sh HL a gS ee fll 100 J my Fy Sy AQ SEME lee i Fe Reply with Changes End Review PivotTable 29 Ein fe Season PivotTable Field List 3 Sum of CATON Season Drag items to the PivotTable report 4 Country CatchCategory e Grand Totall 5 Belgium Landings OB E 6 Belgium Total 8 Ej Country Ej Year 8 Denmark Total 31165000 _ 5201000 26830000 35821000 99037000 CatchCategory 9 Faroe Islands landings 1700 02000 S 402000 hanes 11 7079000 12 7079000 13 971000 19392000 19674000 11944000 34521000 E Season 14 971000 1992000 196874000 11944000 34521000 SeasonType 9000 30533000 30602000 Fleet Landings 4985000 10111000 CATON 16 17 Germany Total BS000 4965000 30533000 10111000 45695000 B l E Officiallandings 18 Netherlands Catch 6340000 9966000 76604000 32046000 19 Landings 215000 0 6067000 E SampledOrExtemated 0 Netherlands Total 35238000 SampledCatch 37638000 E No of Length Samples 37638000 No of Length Measured 23 2421 4000 e ees 24 24214000 5692000 aan ain 26 Sweden Total 2628000 2750000 314000 5692000 WK England 147000 1110000 15248000 4350000 2085500 UK England Total 147000 1110000 15248000 4350000 208
43. 1 Windows Internet Explorer E a Y http jintercakch ices dkiCS Data ApplyEstimation ApplyResultStatus aspx Finalizec X B like i am the only girl in the world Pp k aw Favorites http Winkercatch ices dkics Data 4pplyEstimation Ap ICES CIEM ae z Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password ast yodated Thursday January 27 2011 1 29 22 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 aas arct_ WG imal SSCs _Jllocattion 1 Data was successfully finalized Existing results for the current workingspace Apply scheme Status Creation date Allocation 1 Final 17 27 2011 13 29 View ai 4 F EN Done but with errors on page E E E E m le Internet 5 100 4 When all numbers and mean weight at age or length for all unsampled catches has been calculated it should take less than 20 sec the screen above is shown Click View to see the numbers CANUM and mean weight WECA at age or length for each unsampled catch 99 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data ApplyEstimation 4pplyResultReport aspx enmDisp Final Windows Internet Explorer oj x a FE http fintercatch ices dk C5 Data applyEstimation ApplyResultReport aspx enmDisp m X D like i am the only girl in the world D a Favorites E MSE 0 i ea rapat aoh Eatin
44. 1 3 0 244 207 9 295 921 2000 5 0 276 5 EEE 0 249 5 216 5 235 257 7956 z 0 Aro 209 1 0 255 7 232 4 251 6709011 2r 0 f 0 292 5 292 5 0 0 240 3 247 051060 Zi g 0 290 3 2445 0 261 5 246 7 2245 7469149 EFE g 0 202 fd 0 0 O 244 6766555 4 4 WS Sheets Sheetd Pivot DataDetailed CatchAndSampleD lt ii gt a n a_a a CANUM WECA and length data per age or length for each area and quarter for the WG report in the 2 part of the CatchAndSampleDataTables txt file 110 InterCatch User Manual Version 1 9 3 Microsoft Excel CatchAndSampleDatal ables txt B9 File Edit View Insert Format Tools Data Window Help MEEA MIA OS fll 100 OM MURIM W ee ae ee ee EE E K Country Year CatchCate ReportingC Misreporte Area Season SeasonTyfFleet CATON OfficialLan SampledO SampledC No of LeniNo of LeniNo of Age No Age Readings Denmark 2004 Catch All report aE 1 Quarter TestB 7000 7000 Estimated 0 0 0 0 0 Denmark 2004 Catch All report Way 1 Quarter TestB 21000 21000 Estimated 0 0 0 0 0 Denmark 2004 Catch All report Mb 1 Quarter TestA 2227000 2227000 Estimated 0 0 0 0 0 Denmark 2004 Catch All report Me 1 Quarter TestB 137000 157000 Estimated 0 0 0 0 0 France 2004 Landings Reported Wavy 1 Quarter TestA 4000 Estimated 0 0 0 0 0 M 4 gt gt CatchAndSampleDataTables l lt Ke l z m f E gt Ready Above is the list of catches for all imported stratas no age or length specific data
45. 5500 WkK Northern Ireland 2643000 13000 265600 UK iMarthern Ireland Total 2643000 13000 265600 UK Scotland Discards 22 5000 10944000 Landings 1913000 61256730 1963000 Ktscotlana Total 19135000 53537730 124927000 6637173 rand Total 56446000 o65 6000 259772730 164457000 56725173 IJJBI e bh oo J m1 bJ mM oo Oo aa bi Peo ug mm m1 oO in pim ba g hi oo 2 D D mm Lo D Daa Oo ojoyoyo Oc mm a 4 Lo od DJ Od Od Cd a Ba bo ha Co 9 co nm om iy M oa gt Mh Sheet4 Sheeti f Sheet Sheet3 lt Ready The table could be used for a pivot table where an easy and good overview of e g CATON see above 111 InterCatch User Manual Version 1 9 EJ Microsoft Excel CatchAndSampleDatal ables xls DOR G Sa Edit view Insert Format Tools Data Window Help Type a question for help X es End Review A stock lCountry Year CatchCate ReportingC Misreporte Area Season SeasonTytFleet CATON OfficialLan Sex AgeOrLencAgeOrLencSampledO CANUM WECA 2 Sher 47d3 Denmark 2004 Catch All report MaE 1 Quarter TestB 7000 7000 Undetermii 2 Age Estimated 213 136 3 her 47d3 Denmark 2004 Catch All report MMaE 1 Quarter TestB 7000 7000 Undetermii 3 Age Estimated 17959 112 4 her 47d3 Denmark 2004 Catch All report MMaE 1 Quarter TestB 7000 7000 Undetermit 4 Age Estimated 15196 133 6 her 47d3 Denmark 2004 Catch All report MaE 1 Quarter Te
46. 630 8 UK Scotland 2012 Discards SDN_DEF_ gt 120_0_0_all 16 127 51 w Back Raised Discards page Save group and go to setup Select L D New Group name When the Ok Calculate and continue to Discard Groups page button is pressed the user is returned to the Grouping of Raised Discards page To setup a new group the user should click in the small group number drop down box then select the next number which will be the group number for the new group to setup please see the blue marked 2 in the page above 75 InterCatch User Manual Version 1 9 C i E M MARINE DATA Henrik Kjems Nielsen LOG OUT Last updated 03 May 2013 14 23 51 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme aq Data handling Overviews InterCatch Misc Change password Raised Discards L D No L D Group Group Catch Report Weighting Landing Discard setups setups number name cat cat Parameter Catch kg Catch kg IIb Discards R Report SDN_DEF_ gt 120_0_0_alllLanding CATON 323 000 Country Year Season Area Scotland IIb Discards R Report a 120_0_0_ 91 000 0 ae Ila Discards R Report OTB_DEF_80 99_0_0 Landing CATON 406 000 37 631 Pah d IIb Discards R Report SDN_DEF_ gt 120_0_0_all Landing CATON 174 000 16 128 International Council for the Exploration of the Sea ICES Conseil Internatio
47. Ang in Illa WECA check for Henrik Kjems age 3 and 4 age 3 and 4 Nielsen siall Henrik Kjems nA Cod 2532 age checks for Henrik Kjems DK set 1 Cod 2532 checks set 1 desc Nielsen 2 1 2006 Create New Check Set we EN Done gt le Internet EF k 100 g The advanced validation is not needed in the process of producing stock data for the assessment working groups But it is a useful tool to check if any values are Over or under expected limits or out of expected range The Advanced validation is a complicated tool which the stock coordinator and data submitter need to spend some time on to able to use it In the example shown here two checks are set up for the species anglerfish ANF in area IIIa The following two checks are set up o WECA for age 3 must be between 800 880 grams o WECA for age 4 must be between 900 1100 grams Entering the Advance validation an overview of existing Check Sets is shown By pressing the button Create New Check Set a new Check set is created 21 InterCatch User Manual Version 1 9 METS fintercatch ices dk CS Data Advanced alidation CheckSet frmCheckSet aspx Windows Internet Explorer ey Je http fintercatch ices dk CS Data Advancedalidation CheckSet FrricheckSe 7 ty x x d g Google E sel re a bttp jintercatch ices x data Centre InterCatch ai O Page Safety Tools Data handling
48. InterCatch User Manual Document version 1 9 International Council for the Exploration of the Sea Conseil International pour Exploration de la Mer Contents 3 1 3 2 3 3 5 1 5 2 5 3 5 4 5 5 5 6 5 7 5 8 5 9 5 10 5 11 5 12 5 13 5 14 5 15 6 1 6 2 INTRODUC TION oreinen a S 3 INFORMATION AND ACCESS assnansnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnne 3 ESSENTIAL CONCEPTS IN INTERCATCH ccecccsseseeeeeneeeeeneeeennees 4 Stock and Year Trial or Einmal sciccsccccssccsccsssscsatoocnstecdecuscivescacdecessesearsonsseuoenscsacesoacdscesvecsueseese 4 POM OCATION SCHEMES sscsesessiece behaseseswsctecaseesdeseteaasesebesacetosensigcsevstessauoanqdesesasevenaseseuoeeacensbecsigdetevesessagss 4 Steps im INGORE atese a E Oe 5 LOGGING ON ca a aeseneastieeeees 7 DATA HANDLING issii eaaa aaa 10 Check or Create Fleet Meterse aa ea a 10 Import and Data C hetk wrssiiees vesciccctansussecsrsyes aani anaa iaaa aia eiaa aada 14 A GV ANCE data Che CK essin R 21 Delete Import Datania r EEE AEE 34 Check Stock ATCAS sisicisressso roino acannon eaeoe saa eS aenean ia sea saas oaaao oa eea eaa i 36 Create and Close Stock and Y CAF paons E aA 37 Set Stock and y ar VW Or kimespace wisi tries anlar 40 Extract and View Imported Stock Year Data ccccccsssssssssssscccccssssssssccccsscsssssscccsssessssees 43 Revisions of Previous Years Catches scicccccsscccivscsccdssesec
49. Manual Version 1 9 15 x EA 2 http intercakch ices dk CS Data Advancedyalidation CheckSet frocheckSet asp 4 X D Google Dii http intercatch ices dk CS Data Advanced alidation CheckSet frmCheckSet aspx 7index 1 amp ro 0 Windows Internet Explorer qir Favorites http Mintercatch ices dk cs Data advancedValidation ICES ages Sets ae ee ee ee j E f ET T i i ka Aa PE E P eg ee Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password ast updated Friday January 28 2011 11 15 46 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Step 1 Step 2 Step 3 Target Dataset Checks Information Check Set Creation Module Define checks Available Checks Description Edit Delete WECA 800 880 forage WECA 800 880 for age 3 3 Edit Delete WETA 200 1100 for WECA 900 1100 for age 4 age 4 New Check Import full check set Import check lt Previous Cancel amp Exit Next gt back to ta ui 4 F ii Done but with errors on page zx 4 le Internet 3 100 F When entering the Check Set Creation Module an overview of the created checks are shown Click New Check to set up a new check 25 InterCatch User Manual Version 1 9 http fintercatch ices dk CS Data Advanced alidation Checks frmCheck aspx check 0 Windows Internet Explorer z ioj x 1G 7 FE http f
50. Nielsen Close Stock and Year_ back to top Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved Done r tele Internet EF 100 4 When the stock assessment has been accepted after the review group has gone through the assessment the stock coordinator must go in under 6 Create and Close Stock and Year and close the particular Stock and Year That is done by pressing the Edit button next to the Stock and Year in the Existing Stock and Year overview This will mean the stock coordinator by mistake cannot change data under that Stock and Year If revisions are done in a following year the original data are still saved 39 InterCatch User Manual Version 1 9 5 7 Set Stock and Year Workingspace Menu item 7 Set Stock and Year Workingspace Set Change StockAndYear Windows Internet Explorer E o x 1G 3 E http fintercatch ices dk Co data WorkingSpace WorkingSpaceSelector aspx Lx B Google P z 2 ek qr Favorites 5et change Stock4and X data Centre Inter Catch fay EJ m Page Safety Tools ki a eT Overviews Mi InterCatch gt Data handling gt FEES ener Henrik Kjems Nielsen ata nanding verviews ISC Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset_ Notset___JNot set__Not set Select Working year 2010 r Show stock and yea
51. Overviews Misc ii ii ror Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset sNotset ss Notset Notset_ ss Notset_ sido sets Not sett Step 1 Step 2 Step 3 Target Dataset Checks Information Check Set Creation Module Define target dataset Available dataset definitions No datasets defined New Dataset Import full check set Import dataset definitior Cancel amp Exit Next gt back to top E S a TE ee The progress bar at the top shows how fare in the process of setting up a check the stock coordinator or data submitter is Press New Dataset 22 InterCatch User Manual Version 1 9 gt http intercatch ices dk C5 Data Adyvanced alidation Filters frmFilter aspx check 0 Windows Internet Explorer ol x X EG Googe pl A E http intercatch ices dks DatajAdvancedvalidation Filters frmFilter aspx check 0 r Favorites E aM se SS SE EN SD m ICES CIEM Data handling Overviews Misc Change password Henrik Kjems Nielsen LOG OUT Last updated Friday January 28 2011 11 14 10 AM working year year Stock Assignment WorkingStatus Distribution Allocation scheme Notset s sNotset ss Notset_ Notset_ s Notset_ sdNot sets Not sett Step 1 Step 2 Step 3 Target Dataset Checks Information Edit target dataset Dataset name spe Anf area lIIla Specify target data H Osi SD Equa
52. P qr Favorites E hktpiiiintercatch ices dkicSiDatalAdyancedyalidation ae ICES CIEM Data handling Overviews Misc Change password Last meer 28 2011 11 20 03 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Not set Not set ____ Not set__ Not set Not set Step 1 Step 2 Step 3 Target Dataset Checks Information Check input Step 1 Step 2 Step 3 Define subset of target dataset Define fam check Check information Set up conditions for new check HI CSI sp Specify a range between floor and ceiling Floor Field WeightLanded TA Ceiling Type Value List of added restrictions Comparator Value s Cancel lt Previous Next gt e q Iy Done but with errors on page m A L 4 a zz ie Internet E 100 a Here the check 1s set up It is defined that the WECA WeightLanded must be between 800 and 880 gram is default otherwise this check should give a warning and specify which strata that did not pass this check 27 InterCatch User Manual Version 1 9 g9 OE http fintercatch ices dk CS Data adyvancedyalidation Checks FrmCheck aspx 4 x R Google BE ir Favorites E http inkercatch ices dkics Data Advancedyalidation f S z aes Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 3st updated Friday January 28 2011 11 20 22 AM Working year Data year Stock Assignm
53. Stock Year Data Then the just extracted data is kept in Stock and Year Trial Then the stock coordinator can choose which of the two Trial or Final Stock and Year dataset the user what to work with When having selected a Stock and Year the user is automatically given the possibility to select an allocation scheme When doing an Extract and View Imported Stock Year Data it is not needed to specify an allocation scheme That is first needed when setting up Allocation schemes or using an allocation scheme for calculating distribution age or length data for unsampled catches 41 InterCatch User Manual Version 1 9 InterCatch Windows Internet Explorer lolx D E http fintercatch ices dk Default aspx T x B Google BE a lt p Favorites SS ntercatch x A Data Centre InterCatch ic ine gp Page gt Safety Tools J a eat a _ Pr ro K Ppa _ rA z F k i m i h y 7 2 if F d ICE Te Np La F ea aoe at t 9 iw i x art ee EN EES DS CEM anaes a z Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 sfang kask_ WG _ mia __ Age soot ett back to top Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved Done rf 7 B Internet Fa 100 4 After the Sto
54. Year Windows Internet Explorer lo x Gal TF tte intercatch ices dkiCs datasWorkingSpace WorkingSpaceselector aspx T Rea x g Google pa lz Ftd q Favorites re a Google T amail s ICES CIEM ICES SharePoint Mainpage InterCatch New Prod InterCatch Dev Datras PF set Change StackAndvear oo Bo mp Page Safety Toos W ICES CIEM Data handling Overviews Misc InterCatch gt Data handling gt GRC ee ee eee AE Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 You need to select a StockAndYear before setting up allocations REMEMBER TO ALSO SELECT AN ALLOCATION SCHEME BELOW THE TABLE Select Working year 2 Show stock and year from Selected year All years Please select stock and year WorkingYear Assignment Year Stock CANUMType WorkingStatus 4 o 27010 WG 2009 ang kask Age lire z Pe IO OO iene ioe gt 81 InterCatch User Manual Version 1 9 http sintercatch ices dk CS Data 4pplyEstimation SelectApplyStrata aspx Windows Internet Explorer Sin x zy Fe http intercatch ices dk C5 Data ApplyEstimation Select4pply Strata aspx x x g Google pe a qi Favorites 53 a Google AF Gmail ices CIEM ICES SharePoint Mainpage MS InterCatch New Prod MS InterCatch Dev Datras http Jintercatch ices dk C5 Data ApplyEstimation Sel
55. _ gt 120_0_0_all Back Raised Discards page When the Add selected is pressed the raised discard strata are move into the group The group have been given a name this 1s optional press the Save group and go to setup Select L D The Update group name should only be used when giving the group a name before adding raised discards to it or when renaming the group 72 InterCatch User Manual Version 1 9 amp A http intercatch ices dk CS Data Discard Layout_of_Select_Landings_Discards_for_Grouped_ Raised Dis O BO X ices dk Select Landings Discards for Grouped Raised Discards a ether Group 1 SDN grou 3 records found Country Year Season Area Catch cat Report cat Caton UK Scotland 2012 R Report SDN_DEF_ gt 120_0_0_all 00 0 UK Scotland 2012 R Report OTB_DEF_80 99_0_0 00 0 UK Scotland 2012 R Report SDN_DEF_ gt 120_0_0_all 00 06 m r Filters for sampled strata Countries Seasons a Areas Fleets E Search part of fleet UK Scotland OTB_DEF_80 99_0_0 SDN_DEF_ gt 120_0 0 all name by keyword Update filter Matched landings discards which can be applied to each raised discard in the 3 records found Age or ia z s Landing Multiple gt length Multiple Landing Landing Landing Landing s gt whe Discard in Discard Country Y
56. _0_all 1 Landing CATON 174 000 L 16 128 International Council for the Exploration of the Sea ICES Conseil International pour l Exploration de la Mer CIEM ICES Secretariat H C Andersens Boulevard 44 46 DK 1553 Copenhagen Denmark Tel 45 3338 6700 Fax 45 3393 4215 info ices dk Disclaimer ICES All Rights Reserved If the user want to set up which landing discard ratios to use for a group of raised discards then the user should press the button Go to Group setup 70 InterCatch User Manual Version 1 9 amp AN http intercatch ices dk CS Data Discard Layout_of_the_Grouping_of Raised O BOX ices dk Henrik Kjems Nielsen LOG OUT Last updated 03 May 2013 14 14 03 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme AC Data handling Overviews InterCatch Misc Change password Grouping of Raised Discards Filters for unsampled stratas use shift and ctrl Go to Match Related Landings and Discards Countries Seasons F Areas Fleets a Search part of fleet name by keyword 2 IIb SDN_DEF_ gt 120 0_0 all E 4 Raised Discards which can be grouped together for the same allocation approach 4 records found Country Season Catch cat Report cat UK Scotland Discards R Report SDN_DEF_ gt 120_0_0_all O K UK Scotland Discards R Report SDN_DEF_ gt 120_0_0_all UK Scotland Discards R Report OTB_DEF_80 99_0 0 i Ss
57. a are removed from the Available Landings and Available Discards and the new manually matched landings and discards are shown together with the automatically matched landings and discards under Automatically and manually matched Landings Discards The 3 landing discard strata can now be used for calculating a landing discard ratio which can be used to calculate the raised discards weights At the same time the 4 InterCatch created raised discards strata relating to the 4 quarterly landings just matched landing part of the light green are deleted These 4 created raised discards strata was created because there was not found a matching imported discard But now the user have set up a relation between the 4 quarterly landings strata and the annually discard so now the 4 created raised discards strata must be deleted 63 InterCatch User Manual Version 1 9 Both automatically and manually match landings and discards can be un matched there is no difference between automatically and manually match landings and discards If several landings or discards strata are match together then marking only one of the strata data lines and pressing the button Unmatch marked Landings Discards will result in all of the matched strata are unmatched All the landing and discards which are related have to be matched before proceeding Once all the related landings and discards are matched for the stock the user can proceed to select
58. a have been imported the whole Trial catch dataset should be Finalised Stock Status Creation date ang kask Trial 1 27 2010 14 41 View Please press the Extract button every time you enter InterCatch until all catch data have been imported Pressing the Extract button will make InterCatch extract all Imported catches So you will see all previous catch data you see now plus eventually new imported catch data So by pressing the Extract button you can check if new catches have been imported since last time you pressed the Extract button This page is the overview of imported catches So to find out what have been imported until now you have to press the Extract button By pressing the Extract button you transform the imported species catches to stock catches The Extract button can be pressed any number of times So new catch data will be added to previous the overview back to to Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved E or a Aa In the screen above only a Trial dataset have been created When pressing the button View and then pressing the button Finalize in the next page the Trial dataset is converted to a Final dataset If the user instead presses Extract again InterCatch will extract all the imported stock data into the Trial dataset and overwrite the already existing Trial dataset This can be done
59. aa to unsampled upgrade your browser to IE or later catche Aggregation to international level and export back to top Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved ff 1 I internet Fa 100 4 The main screen of InterCatch On the left hand side log on using your e mail address and the password received InterCatch User Manual Version 1 9 ee InterCatch Windows Internet Explorer E iolx aj F http jintercakch ices dk Default aspx wi 4 x B Google p z gt qr Favorites 59 interCatch x B Data Centre InterCatch i gt Page gt Safety Tools gt ICE Menu bar Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset ss Not set___ Notset_ Notset___ Notset__ Notset__ __ Not set back to to top Stock and Year bar Process area Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved E P PII S YZ The InterCatch interface is divided into 3 parts l Current Stock and Year the top bar of the window 2 Menu bar the very top left part of the window a Process area with different windows depending on what is selected in the menu the lower part of the window Choose your next plan of action by clicki
60. able Checks Description WECA 800 880 for age WECA 800 880 for age 3 Edit Delete 3 WECA 900 1100 for WECA 900 1100 for Edit Delete ae aed New Check Import full check set Import check lt Previous Cancel amp Exit Next gt back to top 4 F FN Done x nil z i EE e Internet 5 k 100 g Another check set up exactly in the same way just for age 4 with WECA range 900 1100 have been set up Above are the two checks shown No more checks are set up therefore Next is pressed 29 InterCatch User Manual Version 1 9 PO http intercatch ices dk CS Data Advanced alidation CheckSet frmCheckSet aspx index 2 ro 0 Windows Internet Explorer loj x iG 3 h http fintercatch ices dkicS Data advanced alidation CheckSet frioCheckSet asps index 7 4 A g Google Pp we Favorites E http inkercatch ices dkics DataladvancedValidation ee al r Pala a oe ee ee a P k me ak mo ai t hn et F r ae Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 3st yndated Friday January 28 2011 11 24 18 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset _ Notset_ s Notset Notset _ s Notset Notset _ __ s Not set Step 1 Step 2 Step 3 Target Dataset Checks Information Check Set Creation Module Check set information Titl
61. al Version 1 9 5 2 Import and Data Check 10 X ey Fe bttp intercatch ices dk Default aspx x a Google pait _ E Ww Favorites aaj InterCatch x M Data Centre InterCatch ai Z mp Pages Safety Tools k pa AT nh p gt ot k ri tefi ru x pa 4 G _ gt ICES BSN E l E ara z Henrik Kjems Nielsen Data handling Overviews Misc aam 1 Check or Create Fleets Metiers it WorkingStatus Distribution Allocation scheme Not set Not set Import and Data Check Advanced Data Check Delete Import Data Check Stock Areas Create and Close Stock and Year Set Stock and Year Workingspace Extract and View Imported Stock Year Data Revisions of Previous Years Catches 10 Setup or Check Allocation Scheme 11 Calculate Distributions from Allocation Scheme 12 View Calculated Distributions earch the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved D Oo es Om in amp W 13 Aggregate and Export Stock Data Le http fintercatch ices dk C5 Data Uploadalidation frmUpload aspx r l Internet cA 100 Z NOTE The format for the files to be uploaded in InterCatch can be found in the Exchange Format manual If there are corrections to a stratum e g catch weight CATON or sample data The corrections should be made in the import file and the file should be imported again with a new file name it will overwrite t
62. and Discards table to show all available Landings Discards pairs all items in all filter parameters must be selected marked blue Select the item by clicking marking a value and holding the shift button down while another item is clicked with the mouse or hold the control button down while selecting individual items in the filter parameters Finally press the Update Filter button By using the check mark to the most left of each stratum strata can be added to the selected or removed from the selected strata 66 InterCatch User Manual Version 1 9 n Henrik Kjems Nielsen LOG OUT Data handling InterCatch Misc Change password Last updated 20 January 2012 15 05 55 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 aas arct wG rial Ae Not set For Unreported Go to Match Related Landings and Discards Discard Country Year Season Available Landings Discards Filter for available landings shown use shift and ctrl Choose fileter UK Scotland Seasons Areas Fleets JLM UE E parameters Countries Age or z Landing Multiple length Multiple Landing Landing Landing Landing 2 Seen Discard in Discard Country RE pap pple Landing Fleet ee Landing in kg Ratio discard discard Catch cat Report cat Fleet OTB_CRU_90 119_0_0_all Catch kg 514 666 Discard D data strata
63. ar 52 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data Revision Revision aspx Windows Internet Explorer Sa Favorites E http Hintercatch ices dki cSiData Revision Revision a S ia Em A ka Je ICES POSE CIEM ia Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password Last updated Thursday January 27 2011 11 38 01 AM Working year Data year Stock Assignment WorkingStatus Distribution eee scheme 2011 2010 ang kask JWG frill Ae Not set Numbers at age will automatically updated according to the new revised CATON In case new information about Numbers and or Mean wwights at age or length have been found These data can be manually edited by checking the Correction from Mi i xxx from DK Undetermined 243 4138 821 0 Undetermined 802 7476 lB02 7476 sd 1020 0 Undetermined 222 6977 222 6977 sd 1410 0 Undetermined 68 3630 2180 0 ee o 11 3938 sd 3938 32200 0 Undetermined g 7040 0 o e l 6 0000 s620 0 B6200 0 10 Undetermined 3 0000 12600 0 Cancel back to top ain 4 Done f T internet hg A100 4 The numbers and mean weights at age or length shown are revised according to the just entered revised CATON Any of the numbers and mean weights at age or length can be manually changed but no automatically adjustments are made This means the stock coordinator have to be sure of the ent
64. ards O O ee Edit Denmark 2010 Discards A All OTB_CRU_90 119_0_0_all 1 200 000 514 666 at oomen 20 2 m mere a _oTmcRsnaieo oot vaeaean00 ean Denmark 2010 3 mb Oiscards aar OTe ceuso 110 0 0 1 47 830 000 Peat Denmark 200 3 na Dicards amn oTe cRu so is 0_0 a 51 749 000 reat enmark 2010 1 a Oiscards AAI sonoma 2880000 ese usoare aio 3 ue ees am orero rosone zic sonon Edit UK Scotland 2010 Ila Discards A All OTB_CRU_70 99_0_0_24 lt 40 30 000 000 back to top 0 0 0 0 0 0 The user is returned to the screen shown above For each stratum where the raised discard have been set up a plus sign is shown to the left of the stratum and the calculated discard catch is shown to the most right BOX InterCatch 10 Setup Unrep X hii Henrik Kjems Nielsen LOG OUT Data handling InterCatch Misc Change password Last updated 20 January 2012 15 03 49 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 aas arct_ JWG rial Jage Not set Setup Unreported Discards Season 2 Discard Report cat Multiple discard stratas Multiple landing stratas Landing Report cat Landing Landing Landing Landing Fleet Area Landing Fleet Year Season Denmark Discards OTB_CRU_90 119_0_0_all 1 200 000 514 666 H gece Discard Discard Discard UK Scotla
65. as ang ang Ws ane a Bottom yon Revise CATON BE kok me a Denmark Ma I Landings 1 496 k __Revise CATON CATON alee Bottom alae Ill LT kask eae Denmark IIT Landings 500 000 Other ang eS back to top 4 4 Done T ff T internet a gt F100 4 When the Revise catches have been pressed The screen above will be shown A plus sign in the first column is shown it is indicating that a revision have been made for that stratum In these screen all catches for the selected Revision data year is shown both catches which was imported with and without sample data Press Revise CATON next to the catch which should be revised 5 1 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data Revision Revision aspx Windows Internet Explorer i joj x Ga T bttp ffintercatch ices dk C5 Data Revision Revision aspx X D Google lr o ong Favorites http Vintercatch ices dk c5 Data Revision Revision a fay ge Pages Safety Tools W ICES te ae ae oe i oaa e ern p s 5 i i i i 7 m y 4 ia FE Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 2st updated Tuesday January 25 2011 4 06 09 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 ang kas G Trial age Nt set E e aA 4 Al 1 496 Numbers at age will
66. atches have been allocated to one unsampled catch then the sampled catches are equally weighted Another alternative allocation scheme with another priority order and weighting could be set up to compare the two different orders of priorities and weitghting Under this allocation scheme all the individual allocations could be set up using e g the following order of priorities first catch category fleet quarter area and finally country 84 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data ApplyEstimation ApplyRuleSetEditor aspx intTargetid 16774 amp int Windows Internet Explore m x paT http fintercatch ices dk CS Data ApplyEstimation 4pplyRuleSetEditor aspri m 4 X D Google D 7 qr Favorites ca ns Google g amail G ICES CIEM ICES SharePoint Mainpage m InterCatch Mew Prod InterCatch Dev Datras 7 Mlerat Atelea tasa TEN Beye Mee ETA ai m Page Safety Tools k nal TEE Em mg g Pa ICES pee TE i a n i 24 ESG CEM E ae a C P e Henrik Kjems Nielsen Data handling Overviews Misc inal Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 Final Age slo Select Allocation Sources Country cas eae Year Ie Season Area Fleet Fleet type type Catch category Report category y CATO CATON f Usage je Qua Quality Depth R R Filter Available strata a
67. atenian m Ee a Saget SSF iy EA l ICES 23 R GA CEM S oi Henrik Kjems Nielsen LOG OUT Last updated Thursday January 27 2011 1 33 46 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 _ __ _ poo as ar WG final Sige SS Allocationi Results of Allocation For aas arct2010 This is the finalized stock where checked data will be used in further tasks Data handling Overviews Misc Change password Status Final Distribution Age Season Area Country me Catch ka Catch Cat Cat Beco WECA Siama aens OE SNOT OSS OE ND De l De Jos Leu rs les is Tue ise Tse m ae A ata ie oso 47 Foe Lemin am O atte rmm be F Back back to top q F EN Done but with errors on page m m PI LJ j Internet 5 100 4 The calculated CANUM and WECA for each unsampled catch can be seen by clicking the sign to the left Two rows of data are shown The upper row contains the CANUM values for each age or length and sex The lower row contains the WECA values in gram If the specific allocated sampled catches to an unsampled catch contained CANUM and WECA for females males and undetermined then CANUM and WECA are represented for the same sexes for the unsampled catch If there are more sexes it 1s useful to use the scroll bar to see all CANUM and WECA The following are the codes for sex e Fe
68. ation scheme Not set ss Notset_ Notset ss Notset_ C dNt sets Not eet Data have been validated and loaded into the InterCatch database back to top Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved Done r TO f Internet ra 100 g A message at the top of the page will inform the user of status for the import When the catch data have been imported with no problems the message shown here is displayed If an error message is shown please contact the ICES Secretariat 20 InterCatch User Manual Version 1 9 5 3 Advanced data check Menu item 3 Advanced Data Check A hereid i intercatch ices dk C5 Data advanced alidation CheckSet frmCheckSets aspx Windows Internet Explorer 2 A E http fintercatch ices dk C5 Data AdvancedValidation CheckSet FrmChecks ir Favorites iol x t X EQ cooge pi E AE OSES RAMSEY AEE asese E ee m 4 af oR sy fa ICES mes Soe 3 FE Te FE Lo f CIEM rs Data handling Overviews Misc Change password Henrik Kjems Nielsen LOG OUT Last updated Friday January 28 2011 11 27 52 4M Assignment WorkingStatus Distribution Allocation scheme Advanced Validation Module Working year Data year Stock Show All Check Sets Show Your Check Sets Available Check Sets Description CreatedBy CreationDate Edit Execute Execute oie Ang in Illa WECA check for
69. automatically be updated according to the new revised CATON In case new information about Numbers and or Mean wwights at age or Comments Revise CATON length have been found These data can be manually edited by checking the Correction from heck box below xxx from Dk l Manually revise CANUM and WECA Repeater1 back to top 4 d ia Done but with errors on page 4 E ee le Internet EF 7 100 4 Enter the new revised catch weight CATON in the field Revise CATON Please add a comment which explains from who and why this revision was made so it is understandable for a person years later Then press Save changes The CATON will be revised and the numbers at age or length will also automatically be revised according to the increased or decreased ratio in revised CATON All previous values are saved Revision of catches originally imported with sample data For revision of CATON which originally was imported with sample data a check box next to the Revised CATON is shown with the text Manually revise CANUM and WECA By checking the check box the stock coordinator is given the possibility to manually revise the numbers and mean weights at age or length see the following page If the updated catch is allocated to unsampled catches then the numbers at age or length for these unsampled catches are recalculated using the new revised CATON A pop up window with a text describing the above text will appe
70. ble landings shown use shift and ctrl Countries MIECZ ERE Seasons F Areas Fleets OTB DEF 80 99 0 0 Search part of fleet 2 IIb SDN_DEF_ gt 120 0 0 all name by keyword 3 4 Update filter No data found Available Discards ble Available Discards rds Filter for available discards shown use shift and ctrl Countries MERE Seasons end Areas iF EEE Fleets oE T Search part of fleet Pra SDN_DEF gt 120 0 0 all name by keyword Update filter Age or length aan Doan Decani Discards Discards Discards a Samples Samples No Age sein sanile samale ms Catch Catch Read eat sample gt amp e Meas Age Length Catch Report cat cat Caton Country Year Season Area Fleet exist R OTB_DEF_80 Report 99_0_0 858 000 000 2012 1 Ila Discards UK Scotland Match marked landings and discards Unmatch marked Landings Discards Automatically and manually matched Landings Discards Landing Landing Discard Discard Catch Report Landing Fleet Catch Report Discard FI cat cat cat cat cota 20122 Ha Landings pape OT2 200 000 tseni 22122 on Landing Landing Landing Landing Country Year Season Area Landing Discard Discard Discard Discard Caton Country Year Season Area Go to Group setup Go to Raised Discards mW After the button Match marked Landings and Discards have been pressed the marked strat
71. c weighting algorithm with CATON weighting But when calculating the mean weight at age or length for the unsampled catch the allocated mean wrights are weighted by their numbers at age The very direct calculations of the numbers at age or length are as follows n i 1 Number si Number s CatchWeightynsampled CatchWeight j 3 a lagefirst ag elast V a lengthyirse lengthigse s female male unspecified n number of allocated sampled catches The calculations of the numbers at age or length are calculated as follows Number si MeanWeightas gt MeanWeightg l 1 4 n 2 j 1 Numberg s j a lagerirse oe a9 east Va lengthrirse lengthiase 90 InterCatch User Manual Version 1 9 s female male unspecified n number of allocated sampled catches CATON weighting CATON weighting is an often used weighting and therefore this weighting is also the default The CATON weighting is equal to the Mean weight weighted by numbers at age or length for calculating the numbers at age By inserting the symbolic expression in the generic weighting algorithm for calculation of the numbers at age or length using CATON weighting the result is exactly the same as for the Mean weight weighted by numbers at age or length By using No sample number for number C sample number for catch weight and then use CATON weighting which mean using the catch weights as w
72. cards aspx O BO X e ices dk Henrik Kjems Nielsen LOG OUT Last updated 03 May 2013 13 46 52 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2013 2012 S___ ifaas arct_ WG imal Cie _ Notset Match related Landings and Discards Data handling Overviews InterCatch Misc Change password Available Landings Filter for available landings shown use shift and ctrl Countries MICE Seasons fi Areas za Fleets J Search part of fleet 2 SDN_DEF_ gt 120 0 0 all name by keyword 3 4 Ae Sta a a Landings Landings Landings Caton Samples No Age No No No cat cat Catch Read Length Sample Sample Meas Age Length Year Season Area R Report R Report R Report R Report UK Scotland UK Scotland UK Scotland UK Scotland UK Scotland UK Scotland 2012 Landings SDN_DEF_ gt 120_0_0_all 50 000 000 2012 Landings SDN_DEF_ gt 120_0_0_all 323 000 000 2012 Landings SDN_DEF_ gt 120_0_0_all 91 000 000 SDN_DEF_ gt 120_0_0_all 111 000 000 2012 Ila Landings 2012 Ila Landings Rep ee SDN_DEF_ gt 120_0_0_all 30 000 000 R Report 2012 Ila Landings SDN_DEF_ gt 120_0_0_all 197 000 000 x Report OTB_DEF_80 99_0_0 406 000 000 R Report UK a Scotland 2012 Ila Landings UK Scotland 2012 IIb Landin
73. ch will create all the Raised missing discard strata the stock coordinator can then select the matching landings and discards which should be used to calculate the Raised discards catch CATON Exporting discards and landings separately is done under the menu item 14 Aggregate and Export Stock Data When exporting only the landings select L Landings in the Catch Category field and select All in all other fields then press the aggregate button and then the export button When exporting only the discards select in the Catch Category field D Discards and again aggregate and export the data as under landings When entering the menu item 10 Setup Raised Discards for the first time InterCatch will give a kind of a warning by asking if the user what to continue to Create Raised Discard Data for all strata where discards are missing If the user by fault pressed the button Create Raised Discard data and do not want all these discard strata then go to menu item 8 Extract and View Imported Stock Year Data and extract again then the extracted data are just the data imported there is no automatically created discard strata Automatically created discard strata have to be actively selected after an stock data extract 56 InterCatch User Manual Version 1 9 ICE S Contact Sitemap AQ Glossary t Login Admin Search Everything C I E M AN i MARINE DATA m Henrik Kjems Nielsen LOG OUT Data handling
74. ck and Year have been marked and you have pressed OK the page above appears Note that your current Stock and Year is at the top is updated 42 InterCatch User Manual Version 1 9 5 8 Extract and View Imported Stock Year Data Menu item 8 Extract and View Imported Stock Year Data Transform to Stock extracts and shows all imported data that relate to the selected Stock and Year which means stock year catch year and distribution age or length http intercatch ices dk CS Data StockTransformation StockTransformationIndex aspx Windows Internet Explorer o x 1G 3 http fintercatch ices dk CS DataStockTransformation StockTransFormation X a Google Pa g we Favorites ai A E oo Pages Safety Tools fief ee eee Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 gkask JWG mia Aage __ Noot set 3 InterCatch gt Data handling gt SEMERE Data handling Overviews Misc nen gt LESIO Extract stock data from imported species data Please press Extract to find out if any catch data hawe been imported Please press the Extract button every time you enter InterCatch until all catch data have been imported Pressing the Extract button will make InterCatch extract all Imported catches So you will see all previous catch data you see now plus eventually new impor
75. d Add selected Add selected Add all A all Add all A Remove all Remove all Remove selected Remove selected strata Catch Report Sampled No No Country Year Fleet WeightingFactor CATON in kg catch in Age saan sampi Hes samples Eae noma T kg read meas Length 2010 2 qua ue 0 jane HumanC Landings 124 362 000 000 124 362 000 000 OTB_ CRU 70 2010 3 qua 99 0 0 24 lt 40 HumancC e 43 000 000 000 43 000 000 000 4 m Comments No comments Weighting Factor at stratum level by Manual Mean Weight weighted by Numbers at Age or Length No Age Read No Length Meas No Samples for Age No Samples for Length Sampled Catch back to top When more than one stratum has been selected the strata will have to be weighted The following weightings can be selected e CATON total catch weight Manual weightings entered by user Mean weight weighted by numbers at age or lenght No age Read numbers of age readings No Length Meas numbers of length measured No Samples for Age total numbers of sample events for age readings No Samp les for Length total numbers of sample events for length measured e Sampled Catch Weight of total catch for a metier which is sampled or a percentage representing a random sampling Except for Mean weight weighted by numbers at age or length all
76. e Quality Depth R ok 2009 3 aua ma Other Unspec Landings A 500000 Na NA NA Area Country Season Catch Category Fleet Filter Availa ble strata E Only Area IIIa z Only DK E Only 3 qua Quarter E Only Landings E Only Other catch in Age Length samples sample Tkg read meas Age Length po tan a EE ethene om gt 2009 4 qua Wa Other Unsnec andinas All ona hg ay a R Selected strata emove Fleet Catch Report CATON Sampled No No No No type category category Country Year Season Area Fleet Landings Landings No selected sources for the current target Comments No comments Weighting CATON algorithm Cancel OK LT f T nenet sa 10 4 Select sampled catches from the Available strata to be allocated to the unsampled catch at the top by ticking the check box at the very left Then you click Add The selected catch is moved to the Selected strata list 87 InterCatch User Manual Version 1 9 intercatch ices dk CS Data ApplyEstimation ApplyRuleSetEditor aspx intTargetid 16 f f4eint Windows Inter net Expl o x f http ce E http fintercatch ices dk C5 Data ApplyEstimation ApplyRuleSetEditor aspx 4 X D Google Pl 7 ir Favorites 5S a Google a amail ICES CIEM ICES SharePoint Mainpage ate InterCatch Mew Prod ma InterCatch Dew Datras
77. e Ang in Illa WECA check for age 3 and 4 max 100 characters Ang in Ila WECA check for age 3 and 4 Description max 500 characters lt Previous Cancel amp Exit Save Check Set C O The set up check set should be given a describing name for the two checks What is entered into the Title is what is shown on the list of Available Check Sets Remember to press Save Check Set IMPORTANT When updating a check that 1s adding changing or removing anything nothing is saved until the button Save Check Set here is pressed 30 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data Advanced alidation CheckSet frmCheckSets aspx Windows Internet Explorer l ioj xi ma T http fintercatch ices dkicS Data Advanced validation heckSet frocheckSets aspx nes Google we Favorites E http Wintercatch ices dkiCs Dataladvancedyalidation HGT ATES ICES fas RG Bs CIEM re Henrik Kjems Nielsen LOG OUT Last updated Friday January 28 2011 11 24 46 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset Notset_ __ Notset Notset __ Notset Notse __ Notset Advanced Validation Module Data handling Overviews Misc Change password Show All Check Sets Show Your Check Sets Available Check Sets Name Description CreatedBy CreationDate Edit ecut Ang in Illa WECA check for Ang i
78. e allocated stratas to the unsampled catch at the top For To remove sampled catch from the Selected strata mark them in the lower list and press Remove You can set more than one check mark both when adding and removing sampled catches as in the example above 88 InterCatch User Manual Version 1 9 A http intercatch ices dk CS Data ApplyEstimation ApplyRuleSetEditor aspx intTargetld 25204 amp intSs O BO X ices dk x Convert v F Select Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 20141 2010 S faas arct WG final Age mixfish demo Select Allocation Sources For unsampled stratum Country Year Fleet Catch Report CATON Misrep to Auto Misrep Usage Quality a th category sirah rt Area from Areas Areas OTB_CRU_70 UKS 2010 4 qua Ila 99 0 0 24 lt 40 Humanc Landings All 3 4 na x Available sampled ua strata Sampled No No No Catch Report Country Year Fleet ane area CATON in kg ae in Length samples samples Usage Quality category category kg pen meas Age Length 50 0 0 2010 1 qua OTB_CRU_70 99 0 0 24 lt 40 umanc Landings All 25 000 000 000 1 1 H NA OTB_CRU_70 us femalo athe owe a foroan o fm fe fm OTB_CRU_70 of oe fe sm oe Semen a ammo o Fe om fw om OTB_CRU_70 2010 2 qua Ila 99 0 0 24 lt 40 HumancC Discards All 38 600 000 000 mw Selected allocate
79. ear Season Area 2Port Landing Fleet landing Landing im ky teg N Ratio fiscand discard i exist J 7 UK 02l 13 34 Ila R SDN_DEF_ gt 120_0_0_all i 388 000 000 197 000 000 0 508 us Scotland Lat Report SS n C i z Scotlanc UK R U Vv Scotland 2012 2 Ila Report OTB_DEF_80 99_0_0 2 935 000 000 111 000 000 0 038 Scotlanc UK R u Scotland 2012 3 Ila Report OTB_DEF_80 99_ 0 0 1 000 000 2 000 000 2 000 Scotlanc 1 r Add selected Add all Remove all Remove selected Selected matched landings discards which will be applied to each raised discard in the group No data found 4 w Comments a Weighting Factor at stratum level by Landing CATON v OK Calculate and continue to Discard Groups page X R10 v When the Save group and go to setup Select L D button have been pressed the user is redirected to the Select Landings Discards for Grouped Raised Discards The user now select which landing discards ratios to use for the calculation of the group 73 InterCatch User Manual Version 1 9 UK Scotland Discards R Report SDN_DEF_ gt 120_0_0_all UK Scotland Discards R Report OTB_DEF_80 99_0_0 UK Scotland Discards R Report SDN_DEF_ gt 120_0_0_all Filters for sampled strata Countries MICR esn Seasons F a Areas iFR Fleets E Search part of fleet SDN_DEF_ gt 120 0 0 all name by key
80. ear Type the name and description of the new Allocation scheme to which you want to copy the existing allocations see the screen above Finally press Copy Allocation schemes can be copied to and from both Final and Trial You can also copy across meaning you can copy an allocation scheme created under Stock and Year Final and copy it to Stock and Year Trial If you want to rename an allocation scheme then press Rename If you want to delete an allocation scheme then press Delete scheme 80 InterCatch User Manual Version 1 9 5 12 Setup or Check Allocation Scheme Menu item 10 Setup or Check Allocation Scheme The next step is to set up allocations of sampled catches to unsampled catches or popular speaking the Hole fill in First select allocation scheme for which you setup allocations Before entering the 10 Setup or Check Allocation Scheme you must select the allocation scheme for which you want to setup allocations do the hole fill in See the top Stock and Year bar s last field Allocation scheme If you have Not set your allocation scheme you are automatically redirected to the 7 Set Stock and Year Workingspace where you can select the allocation scheme in the dropdown box at the bottom of the screen See screen below If no dropdown box is shown create a new allocation scheme by pressing Manage Allocation Scheme gt Set Change StockAnd
81. ed Please scroll down to the bottom See the automatically matched light brown landing discard stratum and green grey landing discard stratum at the bottom of the page By same strata the following fields have to be the same country year area temporal extent e g quarter fleet metier and reporting category But it could be that landings are imported per quarter and discards are imported for the whole year In this case the user manually marks and match the related strata 61 InterCatch User Manual Version 1 9 Filter for available landings shown use shift and ctrl Countries MICR ER Seasons fF Areas TER Fleets ots DEF 80 99 0 0 Search part of fleet 2 IIb SDN_DEF_ gt 120 0 0 all name by keyword 3 Ce 4 Bare PURE A E eee Landings Landings Landings Caton Samples No Age No No No cat cat Catch Ra Length Sample Sample Meas Age Length Country Year Season Area UK R Scotland Landings Report SDN_DEF_ gt 120_0_0_all 50 000 000 Landings 7 SDN_DEF_ gt 120_0_0_all 111 000 000 UK Scotland Report Landings 7 SDN_DEF_ gt 120_0_0_all 30 000 000 UK Scotland Report R Landings Report SDN_DEF_ gt 120_0_0_all 197 000 000 UK Scotland Available Discards Filter for available discards shown use shift and ctrl Countries Geen Seasons Ped Areas iie Fleets W m a8 eon Search part of fleet Po SDN_DEF_ gt 120 0 0 all name by
82. eetonsccuasndessteseseveseocsseceassnsoesessessdeevessvecsene 49 Raised Discar ds essccaconpavassssdecesacesssuscsepesucocasasesoonsecedoseuecoesesussdayevesseassogsoseabbusscadecessunsesesvoosecesees 56 Manage Allocation Scheme cds icisssisissisccacesstocassseseoveboonsssisaswscnccocsvesessessdesssaecobuecesesosssnescieeses 77 Setup or Check Allocation Scheme sssssssssecceccccccccccssssssssccecccocoocccosssssesseccceccosccsssssssssseeee 1 Calculate Distributions from Allocation Scheme ssccccsssssssssssccsccccssssscsccssssscsseees 98 View Calculated Distributions ccc 0s csescoseosessascssssvovesssssasosssbessodcossevecsovsovesssseceoecssedeueseseeses 101 Aggregate and Export Stock Data eeeecccccocosssssssssssscececeocococosssssssececccecsssssssssssssseceeeesssso 102 OVERVIEWS ssoi 113 INT CA T E E S E E 113 a A O OE LE PE E A E E E E E E E 114 CHANGE LOG iiseiiosiiuniius tiani aae aaa aaaea iaia 115 I 2 Introduction The InterCatch information system is designed as a simplified uniform data handler for fisheries commercial catch data submitted to ICES InterCatch includes facilities for processing national data interpolation of missing age or length data and quality checks This results in input files for fisheries assessment and assessment models as well as standard tables for working group reports InterCatch facilitates stock coordinators in keeping track of the available national data Any
83. eighting Landing Discard at cat cat Parameter Catch kg Catch kg UK z E Scotland 7 74 Pel sm isc ce rr 50 000 UK i A __ Scotland oi 1 Discards R Report SDN_DEF_ gt 120_0_0_all 323 000 UK z Scotland eo 2 Discards R Report SDN_DEF_ gt 120_0_0_all 91 000 UK E Scotland 2 14 Discards R Report SDN_DEF_ gt 120_0_0_al 111 000 UK ae Sees on F Scotland eas Ha Discards R Report SON_DEF_ gt 120_0_0_all ne 30 000 UK pa E Scotland ia h Report SDN_DEF_ gt 120_0_0_all l 197 000 UK a Scotland 2012 Discards R Report OTB_DEF_80 99_ 0 0 406 000 UK g Scotland 2012 Discards R ee ee 120_0_0_all 174 000 The screen above shows the automatically created raised discard strata with a catch of 0 kg just after the button Create Raised Discard data have been pressed In the second last column from the right the landings catch is shown so the user has an idea of how important a stratum is Now the user can setup how the calculation of each of the raised discard stratum s catches should be calculated by pressing the Edit button next each stratum Or the user can press the Go to Group setup to setup a group of raised discards for which each raised discard should be raised by the same selection of matched landings discards
84. eighting factors WF sample number the following result is given l F1 2 F2 Number CatchWeighty mica e a a a Cl WF1 WF2 C2 WFI WF2 l l 2 2 CatchWeight psan B TO E a Cl CLF C2 F C2 CRPC24 x Nol No2 CatchWeight t _________ Munana Corg C24 C14 C240 Nol No2 CatchWeight re a CIEC es gt Number CatchWeight yy sampiea gt CatchWeight Jal Here it can be seen that the number at age or length is calculated in the same way for both weighting by CATON and weighting by Mean weight weighted by numbers at age or length Mean weight weighted by numbers at age or length For Mean weight weighted by numbers at age or length the numbers at age or length for the unsampled catch is calculated in exact same way as for weighting by CATON But the mean weight at age or length for the unsampled catch will be calculated based on the allocated mean weights of cause but the weighting is based on the allocated numbers at age or length This will from mathematical point create a sum of products SOP error since the numbers at age or length and the mean weight at age or length not are weighted by the same factor But in the case where the numbers at age for the allocated sampled catches do not have a smooth curve but there are large fluctuations of the numbers at the ages In such cases it could be more correct chose weighting by Mean weight weighted by numbers at age or lengt
85. ent WorkingStatus Distribution Allocation scheme Notset Notset Step 1 Step 2 Step 3 Target Dataset Checks Information Check input Step 1 Step 2 Step 3 Define subset of target dataset Define data check Check information E Specify title and description for new check Title WECA 800 880 for age 3 max 100 characters WECA 800 880 for age 3 Description max 500 characters Cancel lt Previous Save back to to ie 4 IN Done Zz iz Internet Es k 100 4 The specific check should be given a name and saved by Save 28 iol x InterCatch User Manual Version 1 9 http intercakch ices dk CS Data AdvancedYalidation CheckSet frmCheckSet asprrindez l amp roz0 Windows Internet Explo 7 Re tte intercatch ices dk CS DatalAdvancedValidation CheckSet FricheckSet 4 X nm Google k a k qF Favorites httpi intercatch ices dk CS Data Advancedvalidation Rie iy F a et re oe AS Ges a nal E C j B IE a a a CEM E TA Aa l aaa Te e l Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password ast updated Friday January 28 2011 11 21 26 AM Assignment WorkingStatus Distribution Allocation scheme Working year Data year Stock Not set sNotset ss Notset_ Notset ss Notset_ Cs sets Nott set Step 3 Step 1 Step 2 Target Dataset Checks Information Check Set Creation Module Define checks Avail
86. ered values otherwise a sum of products SOP errors can be introduced After the values are changed the button Save changes is pressed 53 InterCatch User Manual Version 1 9 http intercatch ices dk C5 Data Revision Revision aspx Windows Internet Explorer iol x Pa a T http intercakch ices dks Data Revision Revision aspx Z x g Google Pp oe mp Page gt Safety Tools ji 4 ir Favorites http jfintercatch ices dk C5 Data Revision Revision a gi g ICES CIEM Data handling Overviews Misc Change password Last updated Tuesday January 25 2011 4 10 59 PM Data year Stock Assignment WorkingStatus Distribution Allocation scheme Working year 2011 2010 lot set Revision data year 2005 Revise catches Stock Season Country Area Hepi Catch Catch Fleet cat cat l ee Ee kg ang 1 ae Ta i ang 1 am Bottom eae he 2 Denmark IIa A A Landings 130 oe Revise CATON kask Quarter l trawl an 3 ind p0 0 0 Tei ang 4 nth Sees O BBR ouster Denmark mra A M tandngs 906 other HiRevsEcaron back to top rT TT 1 iteme a Amz 4 Jp Done But with errors on page When a CATON have been revised a sign is shown in the first column of the row for the revised CATON strata This indicates that the stratum at one point has been revised 54 InterCatch User Manual Version 1 9 h
87. es also have been setup in the existing Final data set you are also asked if you want to copy and keep the allocations or continue without Again if Allocation Groups have been setup these will also be copied Be aware that finalising a large stocks for which raised discards and all unsampled strata have allocations this process can take long time just leave the browser until you have a response from InterCatch 48 InterCatch User Manual Version 1 9 5 9 Revisions of Previous Years Catches Menu item 9 Revisions of Previous Years Catches Set Change StockAndYear Windows Internet Explorer go http lintercatch ices dk CS data WworkingSpace WworkingSpaceSelector aspx enmRedirect Revision amp wmi 1 l0 x lt 5 RT Jr Favorites Set Change Stock ndYear mp v Page gt Safety Tools A Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 3st updated Tuesday January 25 2011 4 01 29 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 lang kask JWG frial Si Please select a StoackAndYear where working year is current year to be able to revise previous years data Select Working year 2011 Show stock and year from Selected year All years Create new StockAndYear for current year Please select stock and year WorkingY ear Assignment CANUMType WorkingStatus aas arc
88. et Fa 100 In this screen the user can find out which allocation scheme there was used to calculate the age or length distributions for the unsampled catches for the Final dataset or Trial The Trial dataset can also be finalised from this screen by pressing View and then Finalize 101 InterCatch User Manual Version 1 9 5 15 Aggregate and Export Stock Data Menu item 13 Aggregate and Export Stock Data f http Aintercatch ices dk ExportFishData ExportFishData aspx Windows Internet Explorer Oo _ jo x EA 2 http intercatch ices dk ExportFishData ExportFishData aspx T r x a Google Pl 2 qp Favorites 35 Google 4 Gmail s3 ICES CIEM ICES SharePoint Mainpage wa InterCatch New Prod wa InterCatch Dev Datras E bttpsiintercatch ices dkjExportFishData ExportFishD fay Bi O Page Safety Tools InterCatch gt Data handling gt PERE Me ee tee Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 __ang kask_ wG Final 3S s CiA Cle Export of status FINAL data for ang kask in year 2009 pO FleetType Fleet Data handling Overviews Misc Country CatchCategory Sex Plus Group SeasonType Season AreaType Area Export format Low astoft r Survey ALL Final export C Aggregate Export of Files back to top 4
89. et E Explorer lo x SAE PP de bite fintercatch ices dk Co data WorkingSpace Manageapply scheme aspx 4 x g Google P Be m Favorites a a Google a amail a ICES CIEM_ ICES SharePoint Mainpage Interlatch New Prod InterCatch Dev Datras yoan F 7 http fintercatch ices dkic5 data WorkingSpace Man Fr E Page Safety Tools ii Ph 2 a r PGE To rm oe z i y pan Pa a a i A i i a A i T we j j ICES POS ESG S 7 Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Final Age Not eet Manage Allocation Schemes For 2010 WG ang kask 2009 Age Scheme name Description Allocation scheme for ang kask Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved a e Fill in an allocation scheme name and description and press Save The options are Close which cancel and close the screen Clear which clears the written text Save which saves the new allocation scheme After saving your new Allocation scheme a popup verify that your new Allocation scheme was save Look at your Stock and Year bar at the top and verify that the Allocation scheme is the just created allocation scheme name If not then go to 7 Set Stock and Year Workingspace and select the allocation scheme you want in the dropdown box at the bottom
90. ets This of course also means a fleet created by a stock coordinator aimed at a specific stock can also be used by data submitters and stock coordinators for another stock This means that the fleets are completely 10 InterCatch User Manual Version 1 9 control by the stock coordinators and it is their responsibility Therefore it is suggested to use fleets which are general and in line with or the same at what is going to be standard under the European Commission s Data Framework The fleets in InterCatch can be specified to a level equivalent with the European Commission s Data Collection Framework The procedure suggested regarding use of fleets is that the Stock coordinators determine which fleet to use for her his stock agreed by the Data submitters The Stock coordinators should contact other Stock coordinators which might use the same fleets Then the Stock coordinators checks if the fleets already exist if not the Stock coordinators will created the fleets needed Before the Data submitters are using a fleet name in the imported catch data the Data submitters will check that the fleets exist if not the Data submitters should contact the Stock coordinator InterCatch User Manual Version 1 9 C http intercatch ices dk CS Data FleetMaintenance FleetMaintenanceForm aspx Windows Internet Explorer 5 zZ Ioj x eo A 2 bttp fintercatch ices dk C5 Data FleetMaintenance FleetMaintenanceForm a X D Google P Gi
91. ety Tools j aml g results x M data Centre InterCatch st m rag arely a ICE Des ICES amp ra a F Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Result from the ICES Data Screening Utility program for the following data Country DK Email henrikkn ices dk Dataset InterCatch 1 Version Submitting date 26 01 2010 12 14 00 File name Ang Kask Denmark 2005 csv Number of records in file 32 Monitoring year 2005 Max Errors to return 1000 Number of records per record type Import data to InterCatch Back to file summary Back to screening page back to top rN Done but with errors on page x ES Fi le Internet ra 100 A If no errors are found the screen above will appear Please press the Import data to InterCatch button 19 InterCatch User Manual Version 1 9 ify i z f i i i z F x ay go E http fintercatch ices dk CS Data Uploadyalidation FroUploadinsert aspx Session BR x g J Google qr Favorites SS httpsifintercatch ices dk X Data Centre InterCatch ti 7 gah Page Safety Tools a nee sha PIE i E PAE Hie a SOE a Siw se ICES ASS Fae ea ae sri ey ax ie Py ae amp CEM xo ale aun oe we 1 F F a ER a F Henrik Kjems Nielsen Data handling Overviews Misc Log out Data year Stock Assignment WorkingStatus Distribution Alloc
92. female e Ma male e Un undetermined If you have done the work in the Trial Stock and Year but want to finalise the results click the View button for the data set in the work status Trial and then click Finalise 100 InterCatch User Manual Version 1 9 5 14 View Calculated Distributions Menu item 12 View Calculated Distributions r hite fintercatch ices dk C5 data ApplyEstimation ApplyResultStatus aspx 7binUpdateLeftFrame tru Windows Internet Explorer aa g l loj 1 http iintercakch ices dk CS data 4pplyEstimation ApplyResultStatus aspx blnUpd e x x g Google P ae so Favorites ss d Google 4 amail s gt ICES CIEM_ ICES SharePoint Mainpage wa InterCatch Mew Prod InterCatch Dev Datras rt Ftd http fintercatch ices dk CS datajApplyEstimation Ap Ap Do 4 mp Page gt Safety Tools i s h a Pay a p I ja j a re ps f eet i i i rr CEM ae InterCatch gt Data handling gt FERRE eee barter Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 _ _____ ang kask_ wG __ Final Side Not et Assignment WG Stock ang kask Year 2009 Distribution Age Existing results for the current workingspace Apply scheme Status Creation date Alloc Final 1 28 2010 12 41 View back to top rf T f gp intern
93. gle ra le aa 7 qip Favorites 5a a Google i amail ICES CIEM ICES SharePoint Mainpage ae InterCatch New Prod InterCatch Dev Datras Eti bttp fintercatch ices dk C5 data WorkingSpace Man ti Pages Safety Tools a DR iti a be 5 a ae ey CIEM Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 ang kask_ wG Fimal CA Not ett Manage Allocation Schemes For 2010 WG ang kask 2009 Age Select scheme to copy or rename New Close Clear Search the search the site Contact Us Disclaimer Feedback ef After pressing Manage Allocation Schemes in the previous screen the screen above appears From this screen the user can do three things 1 Rename an already existing allocation scheme gt Select an allocation scheme from the dropdown box gt Give the allocation scheme a new name 2 Copy an already existing allocation scheme gt Select an allocation scheme from the dropdown box gt Give the new allocation scheme copy a name 3 Create a new allocation scheme gt Press the button New When the user presses the New button the following screen appears 78 InterCatch User Manual Version 1 9 Aintercatch ices dk CS data WorkingSpace Manage pplyScheme aspx WorkSpace 1 amp binUpdateLefe Windows Intern
94. gs SDN_DEF_ gt 120_0_0_all 174 000 000 Available Discards Filter for available discards shown use shift and ctrl Countries MIER ERE Seasons Areas iF REE Fleets eT Search part of fleet 2012 SDN_DEF_ gt 120 0 0_all name by keyword Age or n e SER a Discards Discards Discards Catch Report eS No No No cat cat discard Samples Samples ae Length Sample Sample data Meas Age Length exist Country Year Season Area a Discards DEF_80 99_0_ 000 resin IIa Di d ee OTB_DEF_80 99_0_0 858 000 000 UK R _ Gcatland 2012 2012 Ila Discards _ SDN_DEF_ gt 120_0_0_all 197 000 000 For a real stock the 3 grids tables cannot be seen on a screen as in the example above only the top part of the page is shown Use the scroll bar to move down In the top grid all landings strata for which there are not imported a matching relating discard weight is shown In the middle grid all discards strata for which there are not imported a matching relating landing weight is shown 60 InterCatch User Manual Version 1 9 E00 A Available Discards UK Scotland UK Scotland UK Scotland UK Scotland UK Scotland UK Scotland UK Scotland UK Scotland Country Year Season Area UK g p E Scotland 2012 2012 SDN_DEF_ gt 120_0_0_all 197 000 000 Match marked landings and discards Unmatch marked Landings Discards Automaticall
95. h Manual equal weighting If several sampled catches are weighted equally the Manual weighting must be selected the default weighting factors for each sampled catch strata is set to 9 InterCatch User Manual Version 1 9 1 which means the sampled catch strata are weighted equally disregarding the catch weight CATON and Numbers at age CANUM The Numbers at age is simply a mean of the rate between each sampled Numbers at age Catch weight Weighting using sampled data Another common way to do weighting is to base the weighting on Numbers of age readings or other sample information Manual weighting in special cases In other more special cases it is wanted to weight sampled data using CATON values from catches with have not been sampled This is not a standard weighting procedure but can easily be performed See the following simplified example were the following data are imported for a specific area and quarter Countries with sample data Countries with No sample data CountryA_SD CountryB_No CountryC_SD CountryD_No P CoountryE_No In this case to do hole fill in for CountryE_No and calculate CANUM WECA and length at age the following two only catches with samples are allocated Allocations for CountryE_No o CountryA_SD o CountryC_SD But these two sampled catches must by weighted CountryB_No s fisheries are similar to CountryA_SD and CountryD_No s fisheries are similar to CountryC_SD And to use that inf
96. he previous imported data Corrections and imports of the same data can be done any number of times only the latest imported data will be available for the stock coordinator Only if the imported data cannot be overwritten by correct data the import should be deleted by entering the Delete Import Data page So if the stratum of the wrong data is not exactly the same as the correct data then it should be deleted The stratum refers the combination of country year season area fleet species catch category and reporting category The data should be deleted if for example a wrong fleet have been used Importing the data file with the correct fleet would not overwrite the data connected to the wrong fleet The data connected to the correct fleet would just be added to all the available data because it is a different stratum so it would not overwrite the wrong stratum By entering the Import and Data Check field you will enter the main screen 14 InterCatch User Manual Version 1 9 Se aa ce ala i map Page Safety Tools 5p Favorites OO Start screening ICES CIEM Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset_ Ss Notset___ Notset_jNotset___ Notset__ sNotset_ Notset_ _ Select the data file to screen maximum 6Mb s Henrik Kjems Nielsen Select the data format version
97. ing allocations and calculations are not affected The stock coordinator can then decide to ignore the new data or update the dataset by clicking Extract NOTE this procedure can only be executed by the Stock coordinator If you click Extract the following page appears 44 InterCatch User Manual Version 1 9 0 x ie y E httpiintercatch ices dk C5 Data StockTransformation Transformspecies Tc 4 X a Google r I F 5p Favorites oe D Google D amail ICES CIEM ICES SharePoint Mainpage A InterCatch New Prod E InterCatch Dev Datras p gt bttp intercatch ices dk iCS Data StockTransformatio Ei B Pag Safety Tools K ae A a ak ere eas Le ICES faassen a BO ao i ta bandin EA Henrik Kjems Nielsen Data handling Overviews Misc acai Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 Age Nt set Selected stock data You can choose which data to finalize by selecting deselecting data from the list Status Trial Distribution Age Stock Year Season Area Country a es Fleet Effort EHE EEEO E a po aie e ox ae e ao Ee adr te oe aom iram at oe Ca ik elase e slim a owe Keep as trial Finalize back to to Search the site Contact Us Disclaimers Feedback Copyright ICES 2008 All Rights Reserved E 2 ss ee ee Pe Here you can see all the imported data s
98. intercatch ices dkics Data advancedyalidation Checks frmCheck aspx chect bod Lx ne Google pe i qr Favorites E hktpiiiintercatch ices dkicSiDatalAdyancedyalidation ae E M3 3 as poe ICES fuse CIEM a Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password Last yndated Friday January 28 2011 11 17 59 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Not set Not set ____ Not set__ Not set Not set Step 1 Step 2 Step 3 Target Dataset Checks Information Check input gni E Step 1 Step 2 Step 3 ata check Check information Define subset of target dataset Define a EE Which subset of data do you want to check HI SI sp Equal To Field Country Is Null Values Is Not Null Enumeration Add selection List of added restrictions Record i Comparator Value Cancel Next gt oe Iy Done but with errors on page z Zz Zz a m Zz le Internet E 100 a This screen is similar to the one when setting up which target dataset is shown Here a subset of the target dataset can be defined Now it is defined that the following check only must be applied to sample data for age 3 Press Next 26 InterCatch User Manual Version 1 9 http fintercatch ices dk CS Data Adyanced alidation Checks frmCheck aspx indexC 1 amp ro 0 amp check 0 Windows Internet Explorer P z ioj x oe L
99. iscard ratio for all the selected ratios is calculated Then this ration is multiplied with the raised discard s related landing weight to calculate the raised discard weight This is done for each of the raised discard strata in the group If the user prefer to set up all the groups before selecting landing discard ratios for the group the user presses the button Cancel and return to Discard group page 74 InterCatch User Manual Version 1 9 amp Dle http intercatch ices dk CS data Discard Layout_of_the_Grouping_of_Raised_Discards aspx Pr Bax ices dk x m h K TE Henrik Kjems Nielsen LOG OUT Data handling Overviews InterCatch Misc Change password Last updated 03 May 2013 14 21 20 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2013 2012 E Aq Grouping of Raised Discards Filters for unsampled stratas use shift and ctrl Go to Match Related Landings and Discards Countries Seasons po aaa oe ee oe 80 99 0 0 Search part of fleet name by keyword a LD a et 0 OI eee Update filter OD Country Report cat Caton amp wman 2012 al m de Rape SNL DEF 20 0 0 w Add selected Add all Remove all Remove selected Group 1 7 SDN group Update group name Cancel 2 D rata i DS Country Year Catch cat Report cat UK Scotland 2012 Discards SDN_DEF_ gt 120_0_0_all 29 937 85 UK Scotland 2012 Discards OTB_DEF_80 99_0_0 37
100. keyword Update filter Age or length eee A eee Discards Discards Discards Discards Catch Report for canales Gamelan in ae o No No cat cat discard ee Tea i Length ee Sampie data Meas Length exist K i R 2012 1 Discards Report OTB_DEF_80 99_0_0 858 000 000 K R 2 2012 2012 Discards Report SDN_DEF_ gt 120_0_0_all 197 000 000 Match marked landings and discards Unmatch marked Landings Discards Country Year Season Area matched Landings Discards Discard Discard Catch Report cat cat Landing Landing Catch Report cat cat Discard Discard Fleet Caton Landing Landing Discard Discard Discard Discard Fleet Caton Country Year Season Area Landing Landing Landing Landing Country Year Season Area Just like described it could be that landings are imported per quarter and discards are imported for the whole year Use the filter to filter the landings In this case there are 4 quarterly landings and 1 annually discard the user then manually check marks the most left column all the four quarterly landings and the annually discard stratum see the page above Then the button Match marked landings and discards is pressed This will match the four quarterly landings with the annually discard stratum 62 InterCatch User Manual Version 1 9 ices dk CS Data Discard MatchingLandingsAndDiscards aspx 2cx ices dk Available Landings Filter for availa
101. l ICES CIEM ICES SharePoint Mainpage MS Intercatch New Prod ME Intercatch Dey Datras t Ay lt _ Page Safety Tools 7 E http Vinkercatch ices dkiCs Data applyEstimation ap ICES CIEM Data handling Overviews Misc Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme WG Final Age Cle Henrik Kjems Nielsen 2010 2009 IG Allocation scheme Alloc For ang kask in 2009 Filter No apply methods has been added to this scheme yet Do you want the system to detect all strata where total catch exists but Age distributions are missing The system will search in Final data due to the selected workingspace nf 4 Done 0 T internet Fa Hi0 g This is the screen shown only the very first time the 10 Setup or Check Allocation Schemes is entered with a new allocation scheme The screen is empty because no set up of allocations and unsampled catches has been made yet Press Yes to let InterCatch identify unsampled catches 83 InterCatch User Manual Version 1 9 http ices dk C5 Data imation lt aspx i 08i 0 amp Wi xplorer oO x aE 7 qp Favorites d a Google a amail ICES CIEM ICES SharePoint Mainpage MS InterCatch New Prod WS InterCatch Dey Datras E TestCatch ices dk http jintercatch ices dk C5 Data ApplyEstimation Ap Too Bo Pages Safety Tools
102. l To Is Null Values Is Not Null Field Country Enumeration Add selection List of added restrictions Record Comparator a e an I FishingArea_ Divisions IIIa oo 5 Save dataset Cancel ole i Done zx xz al xz le Internet Es k 100 4 The Advanced validation tool is looking into all the data imported this means that first the stock coordinator have to specify which dataset this check should work on referred to as the target dataset At the top a dataset name should be given In the example above the check should only check species data ANF in area IMa This is set up by in the field called Field selecting the field species from the dropdown box in the left of the screen The fields in the dropdown box are determined by the 3 buttons above these buttons refer to the fields in the import format so the species field appears among the field in the dropdown box when selecting the button SI look in the import format Then the species is set equal to by selecting the button Equal To Then the species ANF is selected in the list to the right This limitation of the check only looking at the species ANF is then added to the selection criteria by pressing Add selection More selection criteria can be defined Finally the target dataset is saved by pressing Save dataset 23 InterCatch User Manual Version 1 9 C h
103. lgorithm Landings Landings cane x iy COCE Orme a A Filtering Available strata It is possible to limit the available sampled catches if you think the available sampled catches list is too long You can click the button Filter to the right above the Available strata list The button expand the possible parameters to filter on Every time a check is set or removed in the filter check boxes the available strata are updated in screen 86 InterCatch User Manual Version 1 9 f http intercatch ices dk CS Data ApplyEstimation ApplyRuleSetEditor aspxiintiarg Windows Internet Expl o x F http iintercaktch ices dk C5 Data 4pplyEstimation 4pplyRuleSetEditor aspx 4 X a Google Pl qip Favorites r a Google a amail s ICES CIEM ICES SharePoint Mainpage ae InterCatch New Prod ae InterCatch Dey Datras gt http intercatch ices dk C5 Data ApplyEstimation Ap mo Ro o Pager Safety Toos ICES CIEM Data handling Overviews Misc pmp Beda A JE an d F a Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 009 ang kask wG Final side sil O O O lt O Select Allocation Sources Country Year Season Area Fleet Fleet typ e Catch category Report category CATON Usage
104. llowing files with data in the Lowestoft format CATON txt the catch is only from the selection criteria CANUM txt the numbers are only from the selection criteria WECA txt the mean weights are only from the selection criteria AllocationsAndCatchData txt e CatchAndSampleDataTables txt showing all data independent of the selection criteria If discards have set up allocated the following file is also added This file contains the documentation of the selected allocated landings discards for all the raised discards e DiscardAllocations txt If Survey and logbook data have been imported that 1s tuning fleet CPUE data mean weight in stock WEST and maturity data then the following files will also be included in the zip file also in the Lowestoft format e Fleet txt e Maturity txt e WENST txt The CATON CANUM WECA Fleet Maturity and WEST files are text and can be direct used as input to the assessment models 107 InterCatch User Manual Version 1 9 File AllocationsAndCatchData txt E Microsoft Excel AllocationsAndCatchData txt Ee x Ei Fie Edit View Insert Format Tools Data window Help Type a question For help oF ARR A ch Ga A 2 il 100 bi s Pi zt Ne Fe Reply with Changes End Review Netherlands 3 Quarter Waw TestA 2050 Germany ao eae aM Testa 1016 Testa Mo Age Read Netherlands 3 Quarter Wb TestA 400 Germany aot Sante Kai Testa 1360 Manual Manual
105. n Illa WECA check for Henrik Kjems age 3 and 4 age 3 and 4 Nielsen Edit Execute ANK age check ANK age check Henrik Kjems Nielsen Ew pee Cod 2532 age checks for Cod 2532 checks set 1 desc Henrik Kjems DK set 1 Nielsen Create New Check Set 4 IN Done m m le Internet ER 100 4 The two WECA checks for age 3 and 4 for anglerfish in area Ha have been set up see the Check Set Ang in Ila WECA check for age 3 and 4 To execute the Check set with the two checks press Execute 31 InterCatch User Manual Version 1 9 F http intercatch ices dkCS Data Adyvanced alidation CheckSet frmExecuteResults aspx Windows Internet Explorer o x E d http fintercatch ices dk CS Data Advanced alidation CheckSet FrmExecuteResul kedi D Google Pie we Favorites E http lintercakch ices dki CS Data Advancedvalidation Es 1 P Henrik Kjems Nielsen LOG OUT Data haning Overvisss Mec Change pasword endated Fiday January 78 2011 11 95 36 AM Stock Assignment WorkingStatus Distribution Allocation scheme Working year Data year Notset_ Cit set_ s Notset_ Notset_ sd Notset_ C C i Ntse tt_ sNot ett Results of executing check set Check Set Name Ang in IIIa WECA check for age 3 and 4 Description Ang in Illa WECA check for age 3 and 4 Below checks did not pass validation Expanding a check will display the failed data
106. nal pour Exploration de la Mer CIEM ICES Secretariat H C Andersens Boulevard 44 46 DK 1553 Copenhagen Denmark Tel 45 3338 6700 Fax 45 3393 4215 info ices dk Disclaimer ICES All Rights Reserved When retuning to the Raised Discards overview page The user can see InterCatch have calculated a discard weight for the grouped raised discard strata the group number and name is shown and number of landing discards setup for the ratio calculation is also shown If the user want to see the actual landing discards strata that is done by pressing the View link to the most left 76 InterCatch User Manual Version 1 9 5 11 Manage Allocation Scheme Manage Allocation schemes are done from the menu item 7 Set Stock and Year Workingspace Set Change StockAndYear Windows Internet Explorer gt 2 bitte fintercatch ices dk CSfdata WorkingSpace WorkingSpace Selector aspx 4 x B Google P 7 Sup Favorites 4 a Google a amail ICES CIEM ICES SharePoint Mainpage InterCatch Mew Prod a InterCatch Dev Datras Set Change StockAnd year ei k n Page Safety Tools 3 a Eti ee L ESY apup maf j E a a r e ee or i i F k p a a E n i ger ol p F i r U i il H p iu s oo p yei a as a 4 a ag CIEM Sea OY ieee T g j i a a a ma l TE AEE Henrik Kjems Nielsen Data handling Overviews Misc oo Log out Working year Data
107. nd 000 000 38 600 000 000 All reported nonreported and OTB_CRU_70 2010 99_0_0_24 lt 40 90 000 All reported nonreported and misreported OTB_CRU_70 99_0_0_24 lt 40 UK Scotland misreported en oema m0 2 m we am oowoo ooa 124362000 T e E E T a E EEEE E a E E en samo oo o m ses an orecnsncoco sooo UK Scotland Discards OTB_CRU_70 99_0_0_24 lt 40 30 000 000 back to top By pressing the plus sign the selected landings discards which the calculation of the raised discards catch is based on is shown 69 InterCatch User Manual Version 1 9 Discard Group Setup ICES CIEM MARINE DATA Data handling Overviews InterCatch Misc Change password Henrik Kjems Nielsen LOG OUT Working year Last updated 10 May 2013 14 29 13 Assignment WorkingStatus Distribution WG AQ Data year Stock Allocation scheme Raised Discards L D No L D Go to Group setup iv Group Group setups setups Catch Report Weighting Landing number name Country YearSeasonArea cat cat Parameter Discards R Report SDN_DEF_ gt 120_0_0_all Landing CATON te Discard Catch kg Catch kg 323 000 _ Scotland Discards R Report SDN_DEF_ gt 120_0_0_all 91 000 aa Ila Discards R Report OTB_DEF_80 99_0_0 Landing CATON 406 000 37 631 a Discards R Report SDN_DEF_ gt 120_0
108. ng on m Data handling in the menu You will see the following menu items InterCatch User Manual Version 1 9 InterCatch Windows Internet Explorer O xj ie Je bitty intercatch ices dk Default aspx Sal x g Google P lt p Favorites lnterCatch fay gt 4 gm Pages Safety Toos i Data handi Dene Misc Ch a Henrik Kjems Nielsen LOG OUT SLR laleligs Overviews Misc Change password ast updated Tuesday May 31 2011 1 53 29 PM 1 Check or Create Fleets Metiers WorkingStatus Distribution Allocation scheme 2 Import and Data Check lot set 3 Advanced Data Check 4 Delete Import Data 5 Check Stock Areas 6 Fi a 9 Create and Close Stock and Year Set Stock and Year Workingspace Extract and View Imported Stock Year Data Revisions of Previous Years Catches 10 Setup Unreported Discards 11 Setup or Check Allocation Scheme 12 Calculate Distributions from Allocation Schemez2arch the site Contact Us Disclaimer Feedback 13 View Calculated Distributions Copyright ICES 2011 All Rights Reserved 14 Aggregate and Export Stock Data PE 4 http jintercatch ices dk DeFault aspx nim r fe Internet F x 100 g InterCatch User Manual Version 1 9 5 Data handling 5 1 Check or Create Fleet Metiers Select the first menu item under Data handling http intercatch ices dk C5 Data FleetMaintenance FleetMaintenanceForm aspx Windows Internet Expl
109. nimary aspx x x k I Google P Pl I 7 Erd qp Favorites HE File summary x Ab Data Centre InterCatch fal 7 mp Page Safety Tools A Ea ATE to a f aS ICES spy SO eae n Tt hac a Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Not set Notset_ Ss Not set Notset ss Notset_ CsdNotset_ s Not sett File name Ang Kask Denmark 2005 csv File delimiter Survey InterCatch 1 Version Quarter Quarter Country DK Monitoring year 2005 Error limits 100 Data submitter s e mail henrikkn ices dk Note Submitting the file to the ICES server may take some time This will depend on the size of the file the speed of your connection and other internet traffic on the ICES server Back to screening page Iy Done but with errors on page m BE nn le Internet FE E r 100 InterCatch will screen the file If the checking program has found any errors these have to be corrected in the file and then the file have to be screened again To return to the screening program press the Back to screening page button at the bottom of the in page 18 InterCatch User Manual Version 1 9 ely Xx go E http fintercatch ices dk Datsu ScreenStep_ results aspx og 4 x B Google pe l Ww Favorites Oo Screenin a r gm Pages Saf
110. ns from HKN 02 05 2007 Document text revised and updated 28 02 2008 Rewrite updated and add 29 01 2010 Functionality and menu update and Revision added 18 01 2011 1 7 All Revision manually age or length data editing added Import of Tuning Fleets WEST and Maturity under the format Survey and Logbook data New screen shoots for Advance Data Check General uupeales 87 89 only added mess as SE e raised discards setup 60 77 Grouping of discards 115
111. nual Version 1 9 Catches refer to fleets m tiers TT Catch data Species file on local catch data in PC InterCatch 7 main steps in InterCatch Stock and Year must be specified Allocation scheme must F igure oP iagram of the seven main steps in InterCatch where Stock and Year Trial is yellow and Stock and Year Final is orange The table below shows in which steps it is needed to specify Stock and Year and Allocation scheme 6 InterCatch User Manual Version 1 9 4 Logging on Go to the internet page http intercatch ices dk login aspx To log on to InterCatch the user has to enter a username and a password A user must first be created in InterCatch please contact InterCatch Project Manager Henrik Kjems Nielsen henrikkn ices dk or InterCatch Data Officer Anna Osypchuk anna osypchuk ices dk http intercatch ices dk login aspx Windows Internet Explorer l0 x D 2 http fintercatch ices dk login aspx ig 4 x B Google BE p C a qe Favorites SS httpsfintercatch ices x Data Centre InterCatch to gt GJ E mm Pager Safety Toos Sa Ta iw AA ef hs ICES sees CIEM Data handling Overviews Misc Log in InterCatch 2 0 Prod usermame O O A web tool for fish catches Password Ei E POOE sign in in oe Checking This is the new version of InterCatch If there is a problem with menu please Allocating sampled
112. o far The small button with a sign to the left of some data lines are indicating that the catch has been sampled and therefore have an age or length distribution Lines which do not have a button are un sampled catches and need to have allocated sampled data to them Click the button Keep as trial or Finalize depending on which Stock and Year you wish to put the dataset in 45 InterCatch User Manual Version 1 9 a e ee aa Windows Internet Exp orer E bttp fintercatch ices dk C5 Data StockTransformation StockTransformatio 4 X a Google lr T Favorites An a Google a amail ICES CIEM ICES SharePoint Mainpage ME InterCatch New Prod E InterCatch Dev Datras O gt http sintercatch ices dk iCS Data StockTransformatio r HB 3 Page Safety Tools a Sok y Ahat Ji Mpg a _ a pi I C E S a lt mt oe Tb the heehee Henrik Kjems Nielsen CIEM InterCatch gt Data handling gt Eee Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 ang kask_ WG rial Csi __ iJNot eat Extract stock data from imported species data Below is a SNAPSHOT of imported and transformed data LAST TIME the Extract button was pressed Please press Extract to also see new imported catch data Status Trial and Final are two independent datasets But when all dat
113. of the site 79 InterCatch User Manual Version 1 9 gt http intercatch ices dk CS data WorkingSpace ManageApplyScheme aspx WorkSpace 1 amp binUpdateLeft Windows Internet Explorer o x PP httpiintercakch ices dkicsS datalworkingspace Manage pply Scheme aspx x a Google P aes Favorites a Google d amail ICES CIEM ICES SharePoint Mainpage m InterCatch Mew Prod m InterCatch Dev Datras http intercatch ices dkiCS datajworkingS5pace Man i E Page Safety Toals ICES ey SS RG CIEM ma Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Age Not set Manage Allocation Schemes For 2010 WG ang kask 2009 Age Select scheme to oe i CY copy or rename Alloc _New Scheme name NewAlloc Description Copy of Allocation scheme for ang kask Delete scheme Close Clear Rename Copy Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved et If you want to use an existing allocation scheme as a starting point for a new allocation scheme you can copy an existing allocation scheme by going to 7 Set Stock and Year Workingspace and press Manage Allocation Schemes In the dropdown box you can select the Allocation scheme you want to copy from Then two new fields app
114. oordinator does is to finalise the data results if it is correct At least remember to finalise the calculated distributions data to Final status Because only data in Final status can be export If the data are correct but you wish to make a new Allocation scheme you can stay in the Final status and make any number of extra Allocation schemes If using both Trial and Final status If there are more data to import or when data have been changed the new data can be imported in the Trial status without affecting the already prepared Final data set If the new version of data is an improved version of the Final data you can overwrite the first Final version Distribution Catch numbers can either be age or length based After the Stock and Year have been selected the top Stock and Year bar will automatically updated accordingly If the user want to look into data from previous years assessment please select the Working year in the dropdown box in the top left corner Then Stock and years for the selected working year is shown below Managing Allocations schemes is also done from this page First time entering this screen only Stock and Year Trial is present The screen only shows Stock and Year where there is a relating dataset When the user have finalised the trial at any point then the only a Final Stock and Year is Shown until the user makes an Extract and View Imported
115. or each of the sampled catches seen the Selected strata When the button OK is pressed the allocations are saved For all other weighting algorithms than Manual you must select the appropriate weighting in the Weighting algorithm drop down list box The chosen weighting factor is automatically updated with the values from the selected weighting algorithm fields 93 InterCatch User Manual Version 1 9 94 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data ApplyEstimation ApplyRuleSetEditor aspx int largetid 167 f4eint Windows Inte ernet Expl _ O x La Ye http intercatch ices dk CS Data ApplyEstimation 4pplyRuleSetEditor aspx m 4 x a Google P7 a qr Favorites 53 a Google g amail s ICES CIEM 3 ICES SharePoint Mainpage InterCatch New Prod InterCatch Dev Datras 7 gt http jfintercatch ices dk C5 Data ApplyEstimation Ap ei fm Page Safety Tools ICES CIEM Data handling Overviews Misc Henrik Kjems Nielsen Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 __ poo0o9 ss fang kask WG Final Age Alloc Select Allocation Sources r eee ae Area Country Season Catch Category Fleet E Only Area IIIa E Only DK E Only 3 qua Quarter E Only Landings E Only Other Country Year Season Area Fleet S Er pe catch in Age Length samples
116. orer 7 ol x ir Favorites E aask a ae oM ead Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 1 ast are a Friday January 28 2011 11 52 28 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Not set Notset___ Not set_ Not set Notset_ Notset Fleet Add or Update Only Stock Coordinators can insert or update and delete their own fleets Add New Fleet Update Selected Fleet Clear Selection Stock M By Commercial Coordinator Fleet Unit Effort Fleet Type GearClass Gear Group OS SEF Gear Class Gear Group Type Target species SS Mes Size OOOO see Od Group ti Max Selectivity p essee 7 Device Min Vessel Length Vessel Type Range Vessel Vessel Tonnage Min soma Max ee N a Min Max Fleet List sf 4 i Done but with errors on page zz m x i x e Internet Fa 100 4 Before data can be imported the fleets which the catches relate to must be created a Stock coordinator and it must be checked by the Data submitters that it is created Fleets do not belong to a stock or a country as default but if a fleet 1s stock and or country specific then it of course can be created for that purpose and then the fleet name should indicate it and the description should state it clearly because there is nothing that no functionality that hinders others stocks or countries to use any fle
117. ormation a weighting factor for each of the two allocated sampled catches are calculated by summing the related catches CATON Weighting Factor WF based on related fisheries using CATON CountryA_SD WFA CATON_CountryA CATON_CountryB CountryC_SD WFC CATON_CountryC CATON_CountryD These weighting factors can by applied to the two allocated catches using the Manual weighing The summations have to be done outside InterCatch but in this case it is important to write and explanation in the Comments field in the lower left screen 92 InterCatch User Manual Version 1 9 16774 int Windows 1 inter net Expl loj x intercatch ices dk CS Data ApplyEstimation ApplyRuleSetEditor aspx7intT argetid gt http as E http fintercatch ices dk CS Data ApplyEstimation 4pplyRuleSetEditor aspx m X a Google r hr eee mir F soogle D amail db ices CIEM ICES SharePoint Mainpage ME InterCatch New Prod ME InterCatch Dev Datras os o m ak http Mintercatch ices dkic5 Data ApplyEstimation Ap fai z m Pages Safety Tools i EE ak oy a ICES esse CIEM aS Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 ang kask WG Final Age Alo Select Allocation Sources p Country y Year Year J Season Area Heet E E Fleet T pe pe Catch categor
118. other weightings are using a generic weighting algorithm then it is just a question of selecting the field which the weighting factor should be equal to For the manual weighting the weighting are entered directly by the user for each or several strata at the time 89 InterCatch User Manual Version 1 9 The generic weighting algorithm The generic weighting algorithm is weighting the numbers at age or length and mean weight at age or length by the same weighting factor Calculations of numbers at age or length CANUM for unsampled catches are done as the following l Number si WeightingFactor Number CatchWeightunsampiea i ee a 1 i CatchWeight fen Weighting Fk actor 1 l aJefirst a ag east V a lengthyirse T lengthiast s female male unspecified n number of allocated sampled catches Calculations of mean weight and mean length at age or length for unsampled catches are done as the following 4 WeightingFactor MeanWeightas MeanWeight l 1 2 2j WeightingFactorg j a agerirse ne Ag etast Va lengthyirse lengthiase s female male unspecified n number of allocated sampled catches Mean weight weighted by numbers at age or length algorithm The weighting algorithm for Mean weight weighted by numbers at age or length is calculating the numbers at age by a very direct way with no weighting which is exactly the same as using the generi
119. pecify which Stock and Year which means which data set the user wants to work with The use of the two different Stock and Year datasets makes it possible to work with two different datasets a draft and a final set A data set can either be in Stock and Year Trial yellow in figure 1 or Final orange Data sets in the Final status cannot be deleted but improved Trial data can be saved as to overwrite the old Final dataset See Calculate Distributions from Allocation Scheme 3 2 Allocation scheme Another main concept in InterCatch is the possibility to fill in missing age or length data from unsampled catches by an Allocation Unsampled data can be interpolated with data from sampled similar data sets Together with the weighting key when using more than one data set this forms the Allocation scheme The allocation schemes are direct linked to either the Final or the Trial Stock and Year This means that if a dataset in the Trial Stock and Year are saved as a Final the Final dataset is overwritten and the linked allocation schemes are also deleted This means that if stock coordinator has made a allocation scheme in the Final Stock and Year and want to overwrite it The stock coordinator has to copy the allocation scheme from Final Stock and Year to Trial Stock and Year before she overwrites the Final dataset with the Trial The stock coordinator can make any n
120. r from Selected year All years Please select stock and year WorkingYear Assignment Year Stock CANUMType WorkingStatus s El Select Allocation Scheme E Manage Allocation Schemes Cancel OK back to toj zi rf 7 B Internet Fa 100 g Marked the Stock and Year you want to work with then press ORK InterCatch is connected to a database which contains catch data for all the imported species Therefore the user has to specify which data the user wants to work with This is done by Change workspace The Current Stock and Year to the left will be updated after the selected combination of stock working year etc From this point onwards InterCatch is relevant for the stock coordinator 40 InterCatch User Manual Version 1 9 The screen shows the Stock and Years which the user can work with If no records are shown for current year Please press the button Create Stock and Year or enter the menu 6 Create and Close Stock and Year The following explain the fields in the Stock and Year Working year The current year where the work with the stock data are carried out Data year The year of the data Stock The stock code Assignment The data can be assigned to a Working Group WG or Fast Track FT procedure WorkingStatus Either Trial or Final All calculated results from InterCatch default goes into Trial status The first thing the stock c
121. rak Kattegat and skagerrak Skagerak Kattegat Sound Belt amp Baltic Se ome BeltSea IM _ Skagerak Kattegat Sound Belt amp Baltic Se Skagerak Kattegat Sound Belt amp Baltic Se Cw o nohe FAQ area27 area Top Level IvaE Northem North Sea East Wa Northern North Sea Northern North Sea West Northern North Sea Ivb Central North Sea IV North Sea A 4 back to top heal fa Bone Bub uthevor onpage intense Wa doom 7 To see what areas exist in InterCatch the user can select the main menu item Overviews the only menu item under this is the Area list and see the list above If any area needs to be added please contact the ICES Secretariat 113 InterCatch User Manual Version 1 9 6 2 Hint to see data Overviews of data sets in work status Trial or Final location scheme is used To see which if there are data sets in work status Trial or Final or both e Goto menu item 8 Extract and View Imported Stock Year Data Overviews of allocation scheme is used To see which allocation scheme has been used to calculate CANUM and WECA for work status Trial or Final or both e Go to menu item 12 View Calculated Distributions 114 InterCatch User Manual Version 1 9 7 Change Log Date Ver Respon Page Change description sible ref 25 01 2006 21 07 2006 Document updated 23 02 2007 27 03 2007 1 31 BMS 1 52 Document text revised needs final decisions and explanatio
122. ry 27 2011 10 50 21 AM Distribution Allocation scheme Working year Data year Stock Assignment WorkingStatus Age Cs set 2011 2010 Trial Revision data year EONS back to top Search the site Contact Us Disclaimer Feedback Copyright ICES 2011 All Rights Reserved 4 F FN Done but with errors on page w BA E i a le Internet Fa 100 a In the drop down box the data year which needs to be revised is selected and the button Revise catches is pressed Be aware that it 1s the year of which the data comes from which should be selected not the year of the assessment working year If there is no data for the selected year a pop up message will tell this 50 InterCatch User Manual Version 1 9 F ani fintercatch ices dk CS Data Revision Revision aspx Windows Internet Explorer l oj x http Nintercatch ices dk C5 Data Revision Revision aspx 4 xX D Google Ps I C 3 so Favorites 8 http fintercatch ices dk iC5 Data Revision Revision a fag mm Page Safety Tools a a ah a Bia A ICES os CIEM Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password ast yndated Tuesday January 25 2011 4 02 11 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 Not set Revision data year 2005 Revise catches Stock Season Country Area FS
123. s Country exist g All reported UK OTB_CRU_70 UK Scotland aaga 99 _0_0_24 lt 40 25 000 000 000 4 440 000 000 0 178 Scotland misreported 1 ui dd selected dd all Remove all Remove selected Age or R Landing Landing Landing Landing Landing Multiple Sum of Sum of Discar length Multiple Report Landing Fleet landing ae z discard discard Country Year Season Area ry Ee Landing in kg Discard in kg Ratio dete ciraten exist Weighting Factor All reported UK OTB_CRU_70 Scotland 2010 2 Jaaa 99 0 0 24 lt 40 90 000 000 000 38 600 000 000 0 429 0 000 misreported 4 mW Comments Weighting Factor at stratum Landing CATON level by Discard CATON Discard No Age Read i Discard No Length Meas aa Discard No Samples for Age Discard No Samples for Length back to top Landing No Age Read Landing No Length Meas Landing No Samples for Age Landing No Samples for Length Landing Sampled Catch Manual i 100 v In the screen above the 2 quarter stratum have been selected to be used as basis for calculating the discard catch When only one Landings Discards has been selected for the raised discard stratum the weighting factor does not matter Then the discard CATON is calculated directly from For Raised Discard stratums related landing CATON multiplied with the rate between the selected Landings Discards
124. s OTB_DEF_80 99_0_0 Imported Data UKS 197000 Discards SDN_DEF_ gt 120_0_0_all Imported Data vr 3 tT se Ann 1 J i NATA mer An ANA AA l 4 1 j kene te a a m Unreported Discards have been set up the current Final dataset You can copy these setups to the new Final current trial dataset or continue without copying Choose Copy discard setups to copy the exiting setups to the new one or choose Continue to extract without copying press Continue Note All previous discards setups in the current trial wil be permanently lost replaced by the ones in the current final dataset Copy discard setups Continue without copying If new data imports have been made to update catches and or age or length distribution data or new strata have been imported Then you need to make a new extract to get hold of the latest newly imported data and finalise the Trail dataset But if there already exist a Final dataset with raised discards you will be asked if you want to copy the existing Final discard setups that also include the Discard Groups If you have not setup the raised discard in a proper way or you regret you have raised discard for every single landing strata then you press Continue without copying Otherwise you press Copy discard setups and copy your work to the new Final dataset If allocations for unsampled catch
125. st aspx Windows Internet Explorer i olx E y p httpiiintercakch ices dk CS Data Reports StrataDetinitionStocklist aspx x B Google p ia 7 qr Favorites An a Google Mg trail s ICES CIEM ICES SharePoint Mainpage InterCatch New Prod aN InterCatch Dew Datras 7 http intercatch ices dk c5 Data Reports StrataDefi mice a R O Pages Safety Tools AR a mee ps mead Eep ee a CIEM OS InterCatch gt Data handling gt ERs erie ater z Henrik Kjems Nielsen Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset Notset _ Notset_ Not set Stock list her irls HER VIIg Celtic Sea and Division VII herring Celtic Sea and Division VIIj herring Celtic Sea and Division VIIj herring her irls Celtic Sea and Division VIIJ herring Celtic Sea and Division VII herring Herring in Divisions VIa South and VIIb oe Herring in Divisions VIa South and VIIb Herring in Divisions VIa South and VIIb Herring autumn spaw West of Ireland amp Porc Bank Area Vila South her irws Herring spring spaw West of Ireland amp Porc Bank Area Vla South Herring in the North Irish Sea New Herring in the Kattegat and Skagerrak Fishing Area IIIa her manx Herring Manx Stock Herring Mourne Stock Irish Sea herring Division VIIa her nirs Irish Sea herring Division VIIa her noss HER E Norwegian
126. stB 7000 7000 Undetermii 5 Age Estimated 15887 144 6 jher 47d3 Denmark 2004 Catch All report MMaE 1 Quarter TestB 7000 7000 Undetermii 6 Age Estimated 1541 161 mM 4 gt a Sheet3 Sheet4 Pivot DataDetailed CatchandSampleDataTables I lt JE Ready NUM Above is the list of all imported catches data with sample data for each age or length which can be used as a pivot tables for data examination in the 3 part of the CatchAndSampleDataTables txt file Ej Microsoft Excel CatchAndSampleDatal ables xls SAE E Fie Edit view Insert Format Tools Data Window Help Type a question for help f X l Pe Reply with Changes End Review X fe Sum of WECA a aes 1 AgeOrLength 3 j Sum of WECA SampledOrExt Area _ Season v Estimated ee Re ie ee ee ee eee ee ee ee es Sampled Estimated Tot o ee MaE Total Naw MW Total Me Me Total mag Total i Vlld Total llla Total I Nae JVE Total I Naw vaw Total Ve 1 6 Country fw o EA TF t 112 m 336 a 102 a 113 113 54 76 273 113 96 209 64 64 76 76 160 Raion Total P12 8888388 208 208 168 168 152 152 BTS 93 221 221 225 225 84 E O O D ee L vi 4 gt ah Sheet3 Sheet4 Pivot DataDetaled CatchAndSampleDataTables lt ii af Ready The table could be used as a pivot table where an easy and good overview of e g WECA for a given age see the example above where WECA for age 3 is shown 112 InterCatch User Manual
127. t C alf comb C anb 78ab ane bisc 9 ang kask C 2011 WG 2010 anp 8c9a Lngt Trial vr Select There are no Allocation applyscheme available for Manage Allocation Schemes Scheme selected workingspace Cancel OK back to top zi A Done T of internet Fa 7 R10 5 Revision of previous years catch data can be done without going into each specific year for the stock Stock and Year The stock coordinator only has to select the Stock and Year for the current working year Otherwise the stock coordinator is redirected to select the Stock and Year for the current working year The revision is independent of the working status of the selected Stock and Year The revision functionality always makes revisions in a previous year s Final working status After setting the Stock and Year go to menu item 9 Revisions of Previous Years Catches 49 InterCatch User Manual Version 1 9 http intercatch ices dk CS Data Revision Revision aspx Windows Internet Explorer i x R like i am the only girl in the world P D E http fintercatch ices dk cS Data Revision Revision aspx ir Favorites http Hintercakch ices dki cS Datal Revisioni Revision a ICES CIEM i fe P a d E T T F A P gT Ji Faa fai S r P i a a a Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 5 lt updated Thursday Janua
128. ted catch data So by pressing the Extract button you can check if new catches have been imported since last time you pressed the Extract button This page ts the overview of imported catches So to find out what have been imported until now you have to press the Extract button By pressing the Extract button you transform the imported species catches to stock catches The Extract button can be pressed any number of times So new catch data will be added to previous the overview Search the site Contact Us Disclaimer Feedback Copyright ICES 2008 All Rights Reserved Pe 5 ooo gp er When you enter Extract and View Imported Stock Year Data for the first time the message There are currently no transformed data for the current Stock and Year appears Otherwise it reads Extract stock data from the imported species data The stock coordinator can click Extract at all time to see what data have been imported When all the species data have been imported click the Extract button to extract all the imported species data into your stock data 43 InterCatch User Manual Version 1 9 Extract and View Imported Stock Year Data simply looks into all data in the database and takes species and area data which together make up the stock you have selected in your Stock and Year The list of combinations of species and area by which the stocks are defined can be viewed under the menu Over
129. the new extracted dataset in Trial Stock and Year or if it should be finalised which means put into Final You can at any time finalise your Trial dataset To finalize your Trial data set click View for the Trial data set you will return to the screen with an overview of all the imported data and there Finalize your data 47 InterCatch User Manual Version 1 9 ac xX a ices dk e Henrik Kjems Nielsen LOG OUT Data handling Overviews InterCatch Misc Change password Last updated 03 May 2013 13 07 19 Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2013 CsfD fss arct WG Trial Ac Selected stock data You can choose which data to finalize by selecting deselecting data from the list Status Trial Distribution Age Discards Season Area Country k Imported Or Raised a Quarter F f Quarter 1 Quarter 5 f Quarter 2 Quarter 2 Quarter 2 _Quarter 2012 Year 858000 Discards OTB_DEF_80 99_0_0 1000 Imported Data 50000 Landings SDN_DEF_ gt 120_0_0_all 25 Imported Data 323000 Landings SDN_DEF_ gt 120_0_0_all 25 Imported Data 91000 Landings SDN_DEF_ gt 120_0 0 all 50 Imported Data UKS 111000 Landings SDN_DEF_ gt 120_0_0_all 50 Imported Data UKS 2935000 Landings OTB_DEF_80 99_0 0 Imported Data UKS 111000 Discard
130. ttp intercatch ices dk CS Data Revision Revision aspx Windows Internet Explorer i oO x ys http iintercaktch ices dk C5 Data Revision Revision aspx x D Google Di 7 q Favorites http jjintercatch ices dk CS Data Revision Revision a fp R o mm Page Safety Tools j ICES CIEM Ta Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 3st indated Tuesday January 25 2011 4 10 59 PM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2011 2010 ang kask WG rial Ce dN Set Revision data year 2005 Revise catches Stock Season Country Area oe Catch cat Catch kg Fleet E ang g ere Bottom __Revise CATON __Revise CATON Age data Manuall uate changed a p date changed Comments updated 1 25 2011 4 09 51 Correction from xxx from DE _ Previous CANUM CANUM Previous Mean weight Mean weight Undetermined 233 0000 243 4138 821 00 21 00 t Undetermined 73 0000 302 7470 1 020 00 1 020 00 pakta Undetermined 215 0000 222 60977 1 410 00 1 410 00 Undetermined 66 0000 66 3630 2 180 00 2 180 00 Undetermined 11 0000 11 3938 3 220 00 3 220 00 Ta Undetermined 1 9000 1 9680 7 040 00 7 040 00 Undetermined 0 2110 0 2186 8 620 00 8 620 00 Undetermined 0 2110 0 2186 12 600 00 12 600 00 back to top 4 ap Done but with errors on page i iat m z x im i Internet Fa 100
131. ttp intercatch ices dk CS Data Advanced alidation CheckSet frmCheckSet aspx index 0 amp ro 0 Windows Internet Explorer z joj x r J 89 cooo ZE JS E http intercatch ices dkiC5 DatafadyancedValidation CheckSet FrmnCcheckSet aspxrindex 0 Ww Favorites E http ilintercatch ices dkics DatalAdvancedyalidation ae F i aa _ ICES fuss CIEM g ees Henrik Kjems Nielsen LOG OUT Data handling Overviews Misc Change password 2st updated Friday January 28 2011 11 15 16 AM Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme Notset___ s Notset___ _ Notset_ Notset___ _ Notset__ CsNotset__ Not set Step 1 Step 2 Step 3 Target Dataset Checks Information Check Set Creation Module Define target dataset Available dataset definitions Edit Delete spe Anf ar a Illa New Dataset Import full check set Import dataset definitior Cancel amp Exit Next gt back to top Search the site Contact Us Disclaimer Feedback Copyright ICES 2011 All Rights Reserved iy 4 F Ey Done but with errors on page m a P i Internet Fa 100 a The target dataset is now saved If the check needs to be more specific which means more limits should be added to the target dataset criteria definition then press Edit other continue by pressing Next 24 InterCatch User
132. u can click the OK button and your set up of allocations for the unsampled catch is saved under your allocation scheme 95 InterCatch User Manual Version 1 9 For all other weighting algorithms than Manual the weighting is independent of any checks you might have set in the check boxes in the left hand column The check boxes are only for manual weighting 96 InterCatch User Manual Version 1 9 j httpi Aintercatch ices dk CS Data ApplyEstimation ApplySchemeReport aspx7intSeason Oezintarea 0e Windows Internet E Explorer oO x G E httpintercakch ices dk C5 Data ApplyEstimation ApplySchemeReport aspsrintSeason Y 4 x a Google r qip Favorites e X Google E Gmail s3 ICES CIEM ICES SharePoint Mainpage Interatch New Prod aN InterCatch Dev Datras TestCatch ices dk ro gt PE hitoifintercatch ices dkfc5 Data ApplyEstimation Ap ti B E Pager Safety Tools a mis t hs ICES guess CEM Data handling Overviews Misc Log out Working year Data year Stock Assignment WorkingStatus Distribution Allocation scheme 2009 an WG Final Alloc Allocation scheme Alloc For ang kask in 2009 Filter Country Area Year Season DepthStratum Fleet CatchCategory Usage e SampledCatch ledCatch Comments sEm OK ts 2009 a ma omel Ao camments The datagrid above displays a list of targets strata where data are to be applied to clicking the
133. umber of allocation schemes in both Trial and Final Stock and Year Of course only one the optimal allocation scheme can be used to calculate the final age or length data for the unsampled catches which are going to be used in the Virtual Population Analysis or advice But any number of output calculations from different allocation schemes can be exported out of InterCatch and compared if needed 3 3 Steps in InterCatch The InterCatch menu under the menu Data handling consist of 14 menu items InterCatch functionality consists of 7 main steps e 1 Create Fleets Metiers e 2 Import and Data Check e 7 Set Stock and Year workingspace e 8 Extract and View imported Stock Year Data e 11 Setup or Check Allocation Schemes e 12 Calculate Distributions from Allocation Scheme e 14 Aggregate and Export Stock Data The additional functionalities are 3 Advanced Data Check 4 Delete Import Data 5 Check Stock Areas 6 Create and Close Stock and Year 9 Revision of Previous Years Data 10 Setup Raised Discards 13 View Calculated Distributions Any numbers of Data Submitter normally one Data Submitter from each country can import species data into InterCatch But the Stock coordinator is finally responsible and can have an overview of the data available Only the stock coordinator can work on Allocation schemes The format for the files to be uploaded in InterCatch can be found in the Exchange Format manual InterCatch User Ma
134. views Definitions and Stock list If you have selected Current Stock and Year cod nsea Cod in the North Sea and year 2008 data catch year all data which match the year and the species and the area combination which can be seen in the 5 Check Stock Areas are extracted into the Stock and Year dataset Therefore stock coordinators can make this Extract and View Imported Stock Year Data to see which data there have been imported so far and which are missing When all data are imported the Extract and View Imported Stock Year Data should be executed to extract all the imported data into the Stock and Year dataset which the stock coordinator can continue to work with Then the stock coordinator can set up allocation schemes aggregate and export the final stock data Each time you press the Extract button in the Extract and View Imported Stock Year Data page the latest imported data species and area are extracted to the to the Stock and Year dataset and hereby overwrites if any dataset with Trial for the specific selected Stock and Year Only the stock coordinator can make this extraction of data The reason for this manually control of when the Stock and Year dataset is updated is simply to ensure that the stock coordinator has full control over use and extractions of data If a national data submitter imports an updated version of national catch data The Stock and Year dataset and ongo
135. word 2 2012 Update filter length Multiple discard discard data stratas exist UK R OTB_DEF_80 Scotland 2012 3 Ila Report 99 0 0 1 000 000 2 000 000 2 000 ee K 2012 Discard Discard Discarg Country Year Seaso Landing Landing Landing Landing Discard Discard Country Year Season Area atio landing n kg in kg Landing Multiple Report t stratas 4 Wh Add selected Add selected Add all all Add all Remove all Remove all Remove selected Remove selected Landing Multiple Sum of length Multiple ee Sree Report Landing Fleet landing oe ad k Discard in oo discard discar Ey cat stratas g g kg data stratas exist UK Scotland 2012 1 2 3 4 Ila eee SDN_DEF_ gt 120_0_0_all 388 000 000 197 000 000 OTB_DEF_80 99_0_0 2 935 000 000 111 000 000 2012 UK ia R Scotland Report 4 m Comments a Weighting Factor at stratum level by Landing CATON is OK Calculate and continue to Discard Groups page Cancel and return to Discard groups page X Back to Raised discards page http intercatch ices dk CS Data Discard Layout_of_Select_Landings_Discards_for_Grouped_Raised_Discard aspx DiscardGroupld 1 amp 100 v aa When the user presses Ok Calculate and continue to Discard Groups page the total weighted landing d
136. y Report category CATON L Usage e Quality Depth R Dk 2009 Wa Other Unspec Landings 500000 NA NA NA Area Country Season Catch Category Fleet Available strata T only Area IIIa M only DK L only 3 qua Quarter T only Landings l only Other Sampled No No No No j Country Year Season Area Fleet eae Ss catch in Age Length samples samples si type category category ka T ka read meas Age Lenath Sao a DE 2009 4 mia Mia lOther Unsnerc ll andinas All g 4 R Selected strata emove a i Fleet Catch Report Country Year Season Area Fleet type S CATON Sampled No catch in Age Length Ao o e i in kq Tkg Op read meas elo 2009 Humanc Landings All 1496 1496 1483423 846 7852 2009 2 qua ma POOT Humanc Landings All 1170 1170 R is F Comments No comments Weighting WeightingFactor algorithm Cancel OK internet a Rim gt 4 The term Weighting algorithm can be discussed because different weighting like CATON and Manual can be seen as different weighting algorithms InterCatch uses one and the same generic weighting algorithm what differs are the weighting factors When CATON is selected as the Weighting algorithm see example above the CATON weight values are copied to the column weighting factor f
137. y and manually matched Landings Discards Landing Landing Landing Landing Country Caton Samples Length Sample Sample Se Meas Age Length Landings SDN_DEF_ gt 120_0_0_all 50 000 000 Landings R SDN_DEF_ gt 120_0_0_all 323 000 000 Landings SDN_DEF_ gt 120_0_0_all 91 000 000 Landings SDN_DEF_ gt 120_0_0_all 111 000 000 Landings SDN_DEF_ gt 120_0_0_all 30 000 000 Landings SDN_DEF_ gt 120_0_0_all 197 000 000 Landings x OTB_DEF_80 99_0_0 406 000 000 Landings R SDN_DEF_ gt 120_0_0_all 174 000 000 Filter for available discards shown use shift and ctrl Countries MERE Seasons an Areas iF REE Fleets Wj in aF ems Search part of fleet Par SDN_DEF_ gt 120 0 0 all name by keyword Update filter Age or length ee ee ee Discards Discards Discards Catch Report for No No No cat cat gee Samples Samples oe Length Sample Sample ata SEE Meas Age Length Caton exist 1 i OTB_DEF_80 99_0_0 858 000 000 Discard Discard Catch Report cat cat Landing Landing Catch Report cat cat Discard Discard Fleet Caton Landing Landing Discard Discard Discard Discard Fleet Caton Country Year Season Area Year Season Area Go to Group setup Go to Raised Discards When entering the page Match related Landings and Discards all landings and discards from the same strata are automatically match
138. year Stock Assignment WorkingStatus Distribution Allocation scheme 2010 2009 Final Ac Not set Select Working year 2010 Show stock and year from Selected year All years Please select stock and year WorkingYear Assignment Year Stock CANUMType WorkingStatus E o 27010 WG 2009 ang kask Age Final Select Allocation Scheme There are no applyscheme available for selected workingspace Manage Allocation Schemes back to top asa eS Internet 4 100 4 Before setting up any allocation rules you have to start by setting up an Allocation scheme therefore you must specify a name for your Allocation scheme That is done from 7 Set Stock and Year Workingspace Press the button Manage Allocation Schemes When entering the menu 7 Set Stock and Year Workingspace for the first time there will not be a box with Allocation schemes after the Select Allocation Scheme To create a new Allocation scheme click Manage Allocation Schemes The stock coordinator can set up several different alternative allocation schemes they will appear in the Select Allocation Scheme dropdown box 77 InterCatch User Manual Version 1 9 gt http intercatch ices dk CS data WorkingSpace ManageApplyScheme aspx WorkSpace 1 amp binUpdateleft Windows Internet Explo er jo x ic yy http ffintercatch ices dk CS data WorkingSpace Manage4 pplyScheme aspx wor X D Goo

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