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        CHEMICAL MOVEMENT IN LAYERED SOILS, CMLS
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1.     Figure 34  Example of display of potential evapotranspiration data obtained by double clicking on the PET checkmark for the  Christchurch Airport weather station     Page 47      Temperature information of Wauchula  FL  ol x     File    3                                                     lava Application Window    Figure 35  Example of display of temperature data obtained by double clicking on the temperature checkmark for the  Wauchula  Florida weather station     Page 48    2  0 x                    Parameter values of Altus  OK Irr Res Sta Monthly data of Altus  OK Irr Res Sta          Parameter Value  MEA AXDRY  C      25 6 10 431535 0 140496 0 312384 0 449033  PTMAX  C     5 54 20 456693 0 168258 0 35249 0 421007  MEANCYTMAX  C     17 71 30 454545 0 155556 0 380241 0 452956  PCYTMAX  C     17 83 40 452899 0 17226 0 38659 0 653458  ME  s  C    21 46 50 506203 0 24938 0 391276 0 99108  ME IN  C    9 51    0 424419 0 234867 0 38351 1 249551  PTMIN  C     5 44 70 438735 0 149582 0 396528 0 705275  MEANCYTMIN  C     17 67 8 0 439114 0 157783 0 341141 0 828855  PCYTMIN  C     17 86 9 0 488215 0 170676 0 356899 1 081445  MEANRDRY 470 100 480769 0 144362 0 341393 1 204225  ANIPE 195 11 0 493333 0 118519 0 396314 0 594321  MEANRWET 300 120 478261 0 122574 0 348048 0 448638          F ava Application Window    Figure 36  Example of display of WGEN parameters obtained by double clicking on the WGEN checkmark for the Wauchula   Fl weather station     Adding a new station and e
2.     where CNy is the  moisture condition II  curve number for the soil  CNy values are the normal tabulated curve numbers   Equations 13 to 16 estimate infiltration in inches for precipitation in inches     Page 7    Evapotranspiration Estimation  Four sources of daily evapotranspiration  ET  are currently supported in  CMLS98B  These are  1  actual ET values stored in a data file   2  estimated ET using daily pan evaporation data   3   estimated ET using the SCS Blaney Criddle equations with historical or generated weather data  and  4  estimated ET using  the FAO Blaney Criddle method and historical or generated weather  Users can use other estimators outside of CMLS98B and  create  actual  ET files for use in this software  However  only the Blaney   Criddle estimators can be used for Monte Carlo  simulations  If you have other estimators you would like to have incorporated  contact the authors   The methods used to  estimate infiltration and flux of water passing the current chemical depth make CMLS98B somewhat less sensitive than many  crop models to the distribution of daily evapotranspiration  In fact  CMLS98B is sensitive only to the total ET between  infiltration events  The distribution of ET during that time period has no effect on the predicted flux of water and chemical  leaching      The basic concept with all of the ET estimators is to determine a reference crop evapotranspiration value  ETo  and to relate  ET   to ET for the crop of interest by means of time d
3.    Changes made to the database are immediately stored in random access memory and are available for the current use of the  software  The modified database can be written to a file in the local computer by selecting the Export User Data option in the  File menu at the top of the screen  The next time the program is used  these data can be restored by using the Import User Data  option in the File menu     Page 39    Regions and Areas  Figure 26 shows the regions and areas included in the current database  These values can be edited  on this screen  Pressing the  Add an Area  button adds a blank line to the bottom of the table shown  The user can then enter  an area for an existing region or enter both a new region and a new area  This must be done before soils  crops  or weather can  be added for that area     This screen also enables the user to delete an area from the database  Caution  Deleting an area automatically deletes all soils  associated with that area  If that is the only area in the region  the region is also deleted along with all crops and weather  stations in that region           Chemical Movement in Layered Soils E  ioj x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Choose the desired table from the database         Regions Areas   Soils   Chemicals   Crops   Weather Stations                  Soil Region Name Area Name    Florida Jackson      Florida Santa Rosa  MII ew Zealand Canterbury  Oklahoma Caddo  Crop  W
4.    ed   Organic Chemicals in the  Environment  Marcel Dekker Inc   NY  pp 49 143        Hornsby  A G   P S C  Rao  J G  Booth  P V  Rao  K D  Pennell  R E  Jessup  and G D  Means  1990  Evaluation of models for  predicting fate of pesticides  Project Completion Report  Contract No  WM 255  Bureau of Groundwater Protection  Florida  Department of Environmental Regulation  2600 Blair Stone Road  Tallahassee  FL 32399 2400  130p     Jensen  M E   R D  Burman  and R G  Allen  Editors  1990  Evapotranspiration and Irrigation Water Requirements  Am  Soc   Civil Eng  332 pp        Karickhoff  S W  1981  Semi empirical estimation of sorption of hydrophobic pollutants on natural sediments and soils   Chemosphere 10 833 846     Karickhoff  S W  1984  Organic pollutant sorption in aquatic systems  J  Hydr  Eng  110 707 735     Ma  Fengxia  1993  Using the Unix shell to integrate a management model with a GIS  M S  Thesis  Oklahoma State  University  75 pp     Nofziger  D L  and A G  Hornsby  1986  A microcomputer based management tool for chemical movement in soils  Appl  Agr   Res  1  50 56     Nofziger  D L  and A G  Hornsby  1987  Chemical Movement in Layered Soils  User s Manual  Circular 780  Florida Coop   Ext  Ser   Inst  of Food and Agr  Sci   Univer  of Florida  Gainesville  FL  44 pp     Nofziger  D L   Jin Song Chen  and C T  Haan  1994  Evaluating CMLS as a tool for assessing risk of pesticide leaching to  groundwater  J  Env  Sci  and Health  A29 6  1133 1155     Pennell  K
5.   Customize   Back      ava Application Window    Databases       Figure 18  Probability of exceeding different depths of 2 4 D acid 365 days after application in the Cobb Loamy Sand  red  line  and Eufaula Sand  purple line  soils based on 100 different weather realizations for the site in Caddo County   Oklahoma     Page 30    Table 3  Types of probability distributions that can be selected   Probability of exceeding different  e Depths at a specified time after application  e Depths at a specified amount of chemical remaining in profile  e Depths at a specified cumulative infiltration  e Depths at a specified cumulative drainage  e Depths at a specified cumulative flux density passing chemical  e Amounts of chemical  linear scale  passing a specified depth  e Amounts of chemical  logarithmic scale  passing a specified depth  e Amounts of chemical  linear scale  at a specified time after application  e Amounts of chemical  logarithmic scale  at a specified time after application  e Amounts of chemical  linear scale  at a specified cumulative infiltration  e Amounts of chemical  logarithmic scale  at a specified cumulative infiltration  e Amounts of chemical  linear scale  at a specified cumulative drainage  e Amounts of chemical  logarithmic scale  at a specified cumulative drainage  e Amounts of chemical  linear scale  at a specified cumulative flux density passing chemical  e Amounts of chemical  logarithmic scale  at a specified cumulative flux density passing  chemical 
6.   Tabular summaries of more than one simulation    the report will contain information about the collection of simulations            Chemical Movement in Layered Soils s a  ioj x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS           Introduction         Select Type of Report    Soil Select the Type of Table Desired        Weather     Selected parameters as a function of time            Tabular summaries of more than one simulation  simulation    Irrigation              Java Application Window    Figure 19  Introductory screen for all reports  The user uses this screen to select the type of report desired and then presses the   Next  button     Page 32    Selected parameters as a function of time  To make this report  the user must select the soil chemical systems of  interest as illustrated in Figure 20  This selection process is just like the one used for line graphs for individual simulations   Figure 12   The next step  shown in Figure 21  is to select the years to be included in the report  The final step is to select the  parameters to be included in the report and the number of days to simulate for each application date  Figure 22   Figure 23  illustrates part of the report generated by the preceding screens  The file menu contains options for printing the report or saving  it as a text file       Chemical Movement in Layered Soils Be i l    o  x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS       Introduction
7.   and half life t  is the degradation half life of the  chemical at time t     By default  the half life is taken as a constant over all times  However  CMLS98B is capable of adjusting the degradation half   life for temperature changes  The half life at time t and the depth of the pesticide mass center where the soil temperature is  Temp t  is given by       E 1 1  half    life t    H 3 Di  alf     life t    Hpgp arl R ia Temprep   m    Here Hrer J  is the reference half life determined at the incubation temperature Temprer for layer j  Ea is the activation energy  of the degradation reaction  and R is a universal gas constant  0 008315 kJ mol    K         The soil temperature at the pesticide mass center at time t is predicted from observed surface soil temperature data using the  equation       3 st DE  Temp t    Temp      Ae Pe    sin  21 i J z   12     where Tempave and Ao are the annual mean and amplitude of daily average surface soil temperature  to is the time lag from the  starting date of simulation to the occurrence of the minimum temperature in a year  and d is the damping depth of annual  fluctuation     CMLS98B uses dt equal to one day and selects j as the layer containing the chemical at time t  The damping depth d is  estimated from clay content of the solid particles  porosity  and an average water content of the composite soil  Wu and  Nofziger  1998   The annual mean  amplitude  and time lag are evaluated through a least square optimization procedure to  el
8.   so if the root zone can store 21 mm of water at the time of irrigation  the system  would actually apply 30 mm  since 21 mm is 70  of 30 mm                        Chemical Movement in Layered Soils Eoo    File Data Requirements Help  Chemical Movement in Layered Soils   CMLS    Introduction Select Desired Irrigation Practices      O None       Periodic    Demand    Irrigation occurs at regular time intervals during the season        Begin Irrigation   June viis v             End Irrigation    September v   10 v       Days Between Irrigations   7          Irrigation Amount  mm    50 0        Java Application Window    Figure 9  Input screen for periodic irrigation     Page 19                      Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS      15  x        Introduction Select Desired Irrigation Practices    Irrigation occurs when only a specified fraction of available water remains     Begin Irrigation    June    So    End Irrigation    September    10 v    Weather                Graphics Critical Available Water Level      50    i    Irrigation efficiency  0        un  i              Minimum Application Amount  mm      Databases        Java Application Window    Figure 10  Screen for specifying parameters for demand scheduling of irrigation     Page 20    Graphics    CMLS supports many different types of graphs as shown in Figure 11  The first type includes graphs of data from individual  simulations of soi
9.  0 0 1 0 0 0    1 1972 1 0 0 0 93 0 0  1 1972 2 0 023 0 87 7 6  1 1972 3 0 041 0 81 13 7  1 1972 4 0 041 0 76 13 7  1 1972 5 0 041 0 71 14 2  1 1972 6 0 083 0 66 28 4  1 1972 7 0 155 0 62 53 0  1 1972 8 0 155 0 57 53 0  1 1972 9 0 155 0 54 53 0  1 1972 10 0 278 0 5 103 0  1 1972 11 0 292 0 47 110 4  1 1972 12 0 292 0 44 110 4  1 1972 13 0 292 0 41 110 4  1 1972 14 0 292 0 38 110 4  1 1972 15 0 292 0 35 110 4  1 1972 16 0 292 0 33 110 4  1 1972 17 0 383 0 31 160 4  1 1972 18 0 383 0 29 160 4  1 innta LA nani narr 13a                 i ava Application Window    Figure 23  Illustration of the report generated by inputs from the previous screen  The pull down menu associated with the File    option at the top of the screen provides options for printing the report or saving it in a disk file     Page 36    Tabular summaries of more than one simulation  These reports include the raw data used to obtain histograms  and probability distributions  Figure 24 illustrates the screen used to specify the soil chemical systems to be summarized and  the parameter whose distribution is desired  The values are then sorted and displayed in the table in increasing or decreasing  order as specified on this screen  If several soil chemical systems are selected  the report will contain the sorted data for each  system unless the  Combine all systems  option is selected  In that case data from all systems will be combined before sorting  and a single distribution will be output in the report  Figure
10.  198 0  MeanRWet 300 0    Table 6  Format of WGEN Monthly parameter file  Columns are separated by tab keys     Month PWW PWD ALPHA BETA   1 0 409091 0 153179 0 324357 0 442812  0 467005 0 183986 0 340742 0 470576  0 409524 0 18693 0 365041 0 588176   0 423913 0 167683 0 444659 0 742441  0 477193 0 246998 0 402377 1 163035  0 440816 0 235294 0 391554 1 108837  0 411765 0 164464 0 373781 1 180033  0 335079 0 180207 0 379064 0 879246  9 0 378109 0 194053 0 394694 1 213369  10 0 4375 0 127119 0 35608 1 156289  11 0 379085 0 135371 0 337475 0 803611  12 0 438596 0 139168 0 318023 0 5483    COND NB WL    Page 52    Preferences    CMLS 2000 can be customized to meet the preferences of the user  The screen shown in Figure 38 is used for this purpose  It  provides a means for selecting constant or temperature dependent degradation rates for the chemical  English or metric units of  length  and SCS or FAO Blaney Criddle estimators of evapotranspiration  These preferences can be saved in a file and then  read from that file at a later date     Degradation  Degradation is assume to be a first order process in CMLS  By default  the degradation constant is assumed to be  constant with time and depth  The user can use the edit option to enter different half life values for each soil layer  Thus  the  software supports degradation that is a function of soil depth provided the user knows the way in which the half life varies  with depth  The software also supports degradation constants that 
11.  25 illustrates the report generated with from this input panel     Chemical Movement in Layered Soils E    o  x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Select Type and Content of Report                               Soil Distribution of    Different Depths at a Specified Time After Application m  anil Time of Interest  days after application   365    Summarize systems individually      Combine all systems  Crop      Display values in increasing order    Decreasing order  Weather  Available Soil Chemical Systems Selected Syste     a Caddo Cobb Loamy Sand Cobb 1 Cotton   1     irrigation 2 4 D ACID 06 01 1972 0 000 m  1 0 7  gt      l Fort Cobb  OK Fort Cobb  OK periodic  Graphics Begin 06 01 1972 100 22    Caddo Cobb Loamy Sand Cobb 1 Cotton p    Reports ALDICARB 01 01 1972 0 000 m  10 0  2 Fort Cobb  OK Fort Cobb  OK periodic           lt  lt  r  Databases nn  un Details Edit Delete   Back Finish    erence          Java Application Window    Figure 24  This screen is used to select the type of distribution and the soil chemical systems to be summarized     Page 37       Chemical Movement in Layered Soils  lt il    5  o  x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Depth of chemical 365 days after application       Chemical depth  m   0 985  1 05  1 075  1 095  1 114  1 158  1 168  1 168  1 205  1 206  1 207  1 211  1 213  1 214  1 235  1 241  1 25  1 254  1 262    LACH       So
12.  Chemical Movement in Layered Soils   CMLS    Introduction Select the Years of Interest  If you have chosen to simulate movement for more than one year of application   results for more than one year can be displayed on a graph  Select the year or  years to be displayed for each soil chemical system from the list of available  years     Soil    Chemical                     Selected soil chemical Systems Years Years   Weather 2 4 D ACID 06 01 1972 0 000 m  1 0 1973 1972  1 Fort Cobb  OK Fort Cobb  OK demand 1974 3  gt   1973   e Begin 06 01 1972 100 1975 A 1974  l Caddo Eufaula Sand Euf 1 Cotton ES T  Graphics 2 4 D ACID 06 01 1972 0 000  m  1 0  lt  ol  3 Fort Cobb  OK Fort Cobb  OK demand ce  1978   Reports Begin 06 01 1972 100 A T           Databases       Preference    Figure 13  Screen for selecting years to be displayed for each system           Choose color      Page 23    Back    Next               Java Application Window       Pressing  Next  on the screen shown in Figure 13 produces the final screen  shown in Figure 14  for this graphics option  Here  the user chooses the parameter to be displayed on the vertical axis and the parameter to be displayed on the horizontal axis  along with the number of days to be simulated for each chemical application  The example shown shows the depth of chemical  as a function of time after application for 365 days for all 100 simulations of 2 4 D Acid in the Cobb Loamy Sand and in the  Eufaula Sand  Clearly the chemical moves deeper
13.  D   A G  Hornsby  R E  Jessup  and P S C  Rao  1990  Evaluation of five simulation models for predicting aldicarb  and bromide behavior under field conditions  Water Resources Res  26 2679 2693     Rao  P S C   J M  Davidson  and L C  Hammond  1976  Estimation of nonreactive and reactive solute front locations in soils   In Proc  Hazard  Wastes Res  Symp  EPA 600 19 76 015  Tucson  AZ  pp 235 241     Richardson  C W   and D A  Wright  1984  WGEN  A model for generating daily weather variables  USDA  Agricultural  Research Service  ARS 8  83p     USDA SCS  1972  National Engineering Handbook  Section 4  Hydrology     Zhang  H   C T  Haan  and D L  Nofziger  1990  Hydrologic modeling with GIS  An overview  Applied Engineering in  Agriculture 6 453 458     Page 55    Acknowledgements    The authors express appreciation to Dr  A G  Hornsby for his inspiration and cooperation in developing the original version of  CMLS  Funds for the development of this version of the software were provided by the Oklahoma Agricultural Experiment  Station  the Santelmann Warth Professorship  and the USDA Higher Education Cahallenge Grant 00 38411 9324  The Java  software was designed by D L  Nofziger and programmed by Xiwang Zhang  Jinquan Wu  and D L  Nofziger     Contact D L  Nofziger at din okstate edu with questions  suggestions  and comments   Revised May 31  2005    Page 56    
14.  D ACID 06 01 1972 0 000 m  1 0 1974  Irrigation 1l Fort Cobb  OK Fort Cobb  OK demand 1975  Begin 06 01 1972 100  gt  gt  111976       PERE                    Databases        Java Application Window    Figure 21  Screen for selecting years to be included in the report     Page 34       Chemical Movement in Layered Soils       File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Select Table Content    Number of days simulated     Available Table Parameters    Select the parameters to be included as columns in the table     One column will contain the time in days after application        Daily Rainfall   Cumulative Rainfall   Daily Evapotranspiration  Cumulative Evapotranspiration  Daily Irrigation   Cumulative Irrigation   Daily Infiltration   Daily Drainage       betel          Clear        i ava Application Window    Figure 22  Screen for selecting parameters to be included in the report and the length of time to be simulated for each    application date     Selected Table Parameters       Depth of Chemical  Amount of Chemical       Cumulative Infiltration                  Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction    Soil    Chemical    Crop    Weather    Irrigation    Graphics    Reports    Databases    Preference         15  x        Report  System  Application year   Time days    Depth of Chemical  m   Amount of Chemical   Cumulative Infiltration  mm    1 1972 0
15.  Irrigation    Graphics    Reports    Databases    Preference    Soil Properties    Caddo  Cobb Loamy Sand Cobb l vw i                Layer DE Bottom Organic Carbon  Bulk DES Porosity      ota N me whe    ia  0 80  1 00  1 20  1 40  1 60    3 2E 003  3 2E 003  2 7E 003  2 7E 003  1 7E 003  1 7E 003  1 0E 003  1 0E 003       i a  1 55  1 55  1 55  1 52  1 46  1 51    Back    3 a  0 30  0 30  0 30  0 24  0 24  0 25    i  i  0 12  0 12  0 12  0 07  0 05  0 10    7  0 42  0 42              Java Application Window    Figure 3  Soil properties screen for viewing properties of selected soils  If more than one soil was selected  the soil to be    displayed is selected in the pull down menu at the top of the screen     Page 12    Chemical Selection    Figure 4 illustrates the screen used to select one to twenty chemicals that can be simulated for each selected soil  Individual  chemicals can be highlighted in the available chemical list and moved to the list of selected chemicals  The  Enter Application  Parameters  button should then be pressed to specify the date  depth  and amount of each chemical application  That screen is  illustrated in Figure 5  To simulate a chemical applied several times per year  the chemical can be selected several times on the  selection screen  Figure 4  and different application dates used on the screen in Figure 5     Note  No units are specified for the application amount  This simply means that the units associated with the simulated  amounts in the 
16.  Rainfall  e Cumulative Rainfall e Cumulative Evapotranspiration  e Daily Evapotranspiration e Cumulative Irrigation  e Cumulative Evapotranspiration e Cumulative Infiltration  e Daily Irrigation e Cumulative Drainage Below Root Zone  e Cumulative Irrigation e Cumulative Flux Density Passing  e Daily Infiltration Chemical    e Cumulative Infiltration   e Daily Drainage Below Root Zone   e Cumulative Drainage Below Root Zone   e Daily Flux Density Passing Chemical   e Cumulative Flux Density Passing  Chemical       Page 25    Histograms of results of more than 1 simulation  Selecting this graphics option on the screen shown in Figure 11  and pressing the  Next  button yields a screen similar to the one in Figure 15  Here we need to select the soil chemical system  of interest as we did for the previous option  However  we do not need to select the years to be displayed since this option  summarizes data for all the years simulated  In this case we need to select the type of data to be summarized  The options  available are shown in Table 3  In the example shown  we have chosen to display a histogram of the depth of the 2 4 D acid in  the Cobb Loamy Sand at the end of 365 days  Pressing the Finish button produces the histogram shown in Figure 16               Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Define Histogram of Interest                                  Soil Distribution of  Depths at a
17.  Select Soil Chemical Systems to be Included in Report       Soil Select one or more soil chemical systems to be displayed in this report   Then press the button to select the years of interest   Chemical  Available Soil Chemical Systems Selected Systems  Crop Caddo Cobb Loamy Sand Cobb 1 Cotton 1  2 4 D ACID 06 01 1972 0 000 m  1 0  Weathe l Fort Cobb  OK Fort Cobb  OK demand  ugun Begin 06 01 1972 100  Imionti Caddo Cobb Loamy Sand Cobb 1 Cotton  rrigation  ALDICARB 05 01 1972 0 000 m  100 0  2 Fort Cobb  OK Fort Cobb  OK demand  Graphics Begin 05 01 1972 100  Caddo Eufaula Sand Euf 1 Cotton  Reports 2 4 D ACID 06 01 1972 0 000 m  1 0  3 Fort Cobb  OK Fort Cobb  OK demand                         Databases       Details   Edit   Delete   Back   Next    Preference   Java Application Window    Figure 20  Screen for selecting soil chemical systems to be included in the report        Page 33          Chemical Movement in Layered Soils E j    ol x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS          Introduction Select the Years to be Included in Report          If you have chosen to simulate movement for more than one year of application   results for more than one year can be displayed in a report  Select the year or  years to be displayed for each soil chemical system from the list of available  years     Soil       Chemical           Selected soil chemical Systems Years Years  Caddo Cobb Loamy Sand Cobb 1 Cotton 1972 1973       Weather       2 4
18.  Specified Time After Application v  Chemical Time of Interest  days after application   365  Crop  Available Soil Chemical Systems Selected Systems  Wasihor Caddo Cobb Loamy Sand Cobb 1 Cotton 1 lima  2 4 D ACID 06 01 1972 0 000 m  1 0      1 Fort Cobb  OK Fort Cobb  OK demand  Irrigation Begin 06 01 1972 100   gt  gt     x Caddo Cobb Loamy Sand Cobb 1 Cotton  Graphics ALDICARB 05 01 1972 0 000 m  100 0  lt     2 Fort Cobb  OK Fort Cobb  OK demand  Reports Begin 05 01 1972 100  lt  lt  bed  Databases  Details   Edit Delete Back Finish  Preference          Java Application Window       Figure 15  Screen for selecting soil chemical systems and parameters for which a histogram is desired  The  Details  and   Edit  buttons function in the same manner as for line graphs of individual simulations     Page 26                  Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS        Introduction Distribution of depth of chemical 365 days after application       0 4    0 3        Probability    Reports    0 0 0 5 1 0 1 5 2 0 2 5 3 0    Chemical depth  m     Change limits on the graph  Customize   Back  F ava Application Window         Databases        Figure 16  Histogram showing the distribution of the simulated depth of 2 4 D acid 365 days after application in the Cobb  Loamy Sand soil based on 100 different weather realizations for the site in Caddo County  Oklahoma     Page 27    Table 3  Types of histograms that can be
19.  e Times to reach a specified depth  e Times to reach a specified amount remaining  e Times to reach a specified cumulative infiltration  e Times to reach a specified cumulative drainage  e Times to reach a specified cumulative flux density passing chemical  e Cumulative infiltration at a specified time after application  e Cumulative infiltration required to move chemical to specified depth  e Cumulative infiltration corresponding to a specified amount of chemical remaining  e Cumulative infiltration resulting in specified cumulative drainage  e Cumulative infiltration resulting in specified cumulative flux density passing chemical  e Cumulative drainage at a specified time after application  e Cumulative drainage corresponding to movement to a specified depth  e Cumulative drainage corresponding to a specified amount remaining  e Cumulative drainage resulting from a specified amount of infiltration  e Cumulative drainage corresponding to a specified cumulative flux density passing chemical          Page 31    Reports    This option provides model output in tabular form  These tables can be viewed on the screen  printed on a printer  and saved in  text files for use in other programs  The steps involved are similar to those of graphics  The user must first select the type of  report desired from the screen shown in Figure 19  If  Selected parameters as a function of time  is chosen  the report will  contain detailed data on each simulation selected for each day simulated  If
20.  from equation 6 is less than Opwp j   9   G  t is set  equal to Opwe j    Page 4    ASSUMPTIONS IN STEP 1    1  The amount of water removed by evapotranspiration from each layer of the root zone is proportional to the amount of  available water in that layer    2  The water content of the soil does not decrease below the permanent wilting point    3  Water does not move upward from below the root zone  The chemical does not move upward anywhere in the profile     Step 2  Adjust Water Content for Infiltration  Water content in the soil root zone is adjusted for infiltration by filling  consecutive layers of the profile to field capacity until the entire root zone is recharged or until the infiltrating water has been  stored  The amount of water required to recharge a layer to field capacity  or the soil water deficit for the layer  is given by       swd j    T  IOFo     05   7     If I j t dt  represents the amount of water infiltrating into layer j between time t and time t   dt  then the amount of water  entering layer j 1 is given by      j 4t   dt      t  dt     swd j   8     If I j 1  t dt  is greater than zero then 0 j t dt    O  c j  and equations 7 and 8 are applied to the next layer in the root zone  If  I j 1  t dt  in equation 8 is less than zero  then I j 1  t dt    0 and     j t   dt     O j t   dt    6  j t   j t  dt    0  j t    TI      9     For layers below the root zone  the water content is equal to the field capacity at all times  Thus water passing the ro
21.  in the Eufaula sand  Also  we can see the large range of depths predicted due  to different weather regimes all characteristic of the same weather station     Many other types of graphs can be selected from the pull down menu on this screen  These choices are given in Table 2            Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS                Introduction  Soil Vertical Axis Horizontal Axis     Depth of Chemical r     Time After Application  gt   Chemical Number of days simulated   365 View results Back    Change limits on the graph  Customize  Crop Time After Application  days   0 0 75 150 225 300 375  Weather     n E  rrigation z  Graphics              orts    Rep AA  A  Databases  Preference        Java Application Window    Figure 14  Illustration of final screen in graphics option showing simulated depth of 2 4 D acid in two soils using 100 different  weather realizations for the site in Caddo County  Oklahoma        Page 24    Table 2  Parameters that can be displayed on horizontal and vertical axes of line graphs        Vertical Axis Horizontal Axis  e Time  including year of application  e Time  including year of application   e Time after Application e Time after Application  e Depth of Chemical e Depth of Chemical  e Amount of Chemical  linear scale  e Amount of Chemical  linear scale   e Amount of Chemical  logarithmic scale  e Amount of Chemical  logarithmic scale   e Daily Rainfall e Cumulative
22.  in the soil is adjusted  for infiltration   3  the flux of water passing the chemical is determined   4  the new depth of chemical is calculated  and  5   the amount of chemical remaining in the soil is calculated  The following paragraphs present the details of these calculations   In those paragraphs the soil is made up of layers entered by the user and additional layers with bottoms at the root zone depth  and at the current depth of the chemical     Step 1  Adjustment for Evapotranspiration  CMLS98B assumes water is removed from the root zone to meet daily  evapotranspiration demands  The water content of the root zone never decreases below the water content at permanent wilting  point  Evapotranspiration is partitioned between layers in the root zone such that each layer looses water in proportion to the  amount of water available for plant growth which is stored in that layer  The water stored in a layer j at time t is given by    WS j    T DIO   1     Opwp      4     where WS j  is the water stored  T J  is the thickness of the layer  0 j t  is the volumetric water content of the layer  and 0pwp j   is the water content of layer j at permanent wilting point  The total water stored in the root zone is    WS ora    Y WS j   5   j    where n is the number of layers in the root zone  The water content after evapotranspiration 0    j t  is    ET e WS j   WSroraT j        O  j t    0 j t   6     where ET is the evapotranspiration on the current day  If 0    j  t  calculated
23.  selected   Distribution of  e Depths at a specified time after application  e Depths at a specified amount of chemical remaining in profile  e Depths at a specified cumulative infiltration  e Depths at a specified cumulative drainage  e Depths at a specified cumulative flux density passing chemical  e Amounts of chemical  linear scale  passing a specified depth  e Amounts of chemical  logarithmic scale  passing a specified depth  e Amounts of chemical  linear scale  at a specified time after application  e Amounts of chemical  logarithmic scale  at a specified time after application  e Amounts of chemical  linear scale  at a specified cumulative infiltration  e Amounts of chemical  logarithmic scale  at a specified cumulative infiltration  e Amounts of chemical  linear scale  at a specified cumulative drainage  e Amounts of chemical  logarithmic scale  at a specified cumulative drainage  e Amounts of chemical  linear scale  at a specified cumulative flux density passing chemical  e Amounts of chemical  logarithmic scale  at a specified cumulative flux density passing  chemical  e Times to reach a specified depth  e Times to reach a specified amount remaining  e Times to reach a specified cumulative infiltration  e Times to reach a specified cumulative drainage  e Times to reach a specified cumulative flux density passing chemical  e Cumulative infiltration at a specified time after application  e Cumulative infiltration required to move chemical to specified depth  e Cumulat
24.  shown in this manual are based on using this weather station and 100 simulations as shown  here     Page 17       Chemical Movement in Layered Soils a pr   Ioj x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS       Introduction Select Source for Daily Rainfall and Evapotranspiration       Daily rainfall and PET    Historical Weather    Weather Generator       Weather Station  Fort Cobb  OK         Number of Simulations   100    Random Number Seed     Automatic       Manual  81188    Databases        Java Application Window    Figure 8  Screen for specifying the weather generator as the source of weather data        Page 18    Irrigation    Irrigation practices can have a large impact upon chemical leaching  CMLS supports two irrigation management systems  The  first is called periodic  In this method  a specified amount of water is applied at regular intervals during the irrigation season   Figure 9 illustrates the screen used for periodic irrigation  The second type of irrigation is irrigation on demand  That is  the  amount of water stored in the root zone is calculated daily  During the irrigation season  when this amount of water reaches a  specified level  water is added to the soil to bring it back to field capacity  This input screen is shown in Figure 10  Irrigation  efficiency as used here refers to the ratio of the amount of applied water stored in the root zone to the amount of water applied  to the soil  In the illustration this is 70 
25. 0  Irrigation 4BEMECTIN AVERMECTIN  4760 0 28 0  4 CEPHATE 2 0 3 0    4 CIFLUORFEN SODIUM SALT 113 0 14 0  Graphics 4CHLOR 170 0 15 0  DICARB 30 0 30 0  DOXYCARB  ALDICARB SULFONE  10 0 20 0  Reports ETRYN 300 0 60 0  ITROLE 100 0 14 0  Database LAZI 1000 0 1 0 H  4SULAM SODIUM SALT 40 0 7 0 400 0  T3 Add a chemical   Delete a chemical    erence             F ava Application Window       Figure 29  Screen for editing chemical properties or adding a new chemical to the database     Page 43    Crops  Crops data consists of a region name  crop name  root depth  and crop coefficient for the first day of each month of  the year  Pressing the Crops tab results in the screen shown in Figure 30 to be displayed  Data for an existing crop can be  edited by selecting the crop from the displayed table and pressing the Edit button  A new crop can be added by pressing the  Add a new crop button  Both options utilize a screen like the one shown in Figure 31 to enter or edit the data            Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Choose the desired table from the database    cals   Crops         Crop coefficients of all crops       Soil       Chemical    Crop    Weather    Irrigation       Graphics    Reports    Databases       Add a new crop   Edit an existing crop   Delete an existing crop       Java Application Window    Preference                   Figure 30  Screen displaying crop names and proper
26. 1950 9 00 54 0 72 0  1950 10 0 0 54 0 77 0  1950 11 0 0 41 0 80 0    1950 12 0 0 37 0 72 0  1950 13 0 0 38 0 71 0  1950 14 0 0 34 0 72 0  1950 15 0 026 36 0 64 0  1950 16 0 217 35 0 64 0  1950 17 0 0 35 0 74 0  1950 0 0 39 0 64 0  1950 19 0 0 36 0 62 0  1950 20 0 0 29 0 57 0  1950 21 0 0 26 0 57 0    1950 22 0 0 43 0 78 0  1950 23 0 064 48 0 76 0  1950 24 0 0 50 0 83 0  1950 25 0 0 52 0 84 0  1950 26 0 0 49 0 80 0  1950 27 0 0 44 0 74 0  1950 28 0 0 64 0 83 0  1950 29 0 0 48 0 74 0  1950 30 0 0 46 0 74 0  1950 31 0 0 47 0 74 0    1950  1950           0 001 35 0 60 0  0 0 40 0 70 0    DO e e e e a e e i nr ae na nr ae rar a ae er e ren E Eta ta tan a i n an a i i a        oe     N    Page SI    WGEN parameters are obtained by processing 20 or more years of historical weather data with the WGEN software   of Richardson and Wright  1984   The documentation for this weather generator and source code for the program are available  here  Two files are needed for the WGEN parameters  One contains site parameters and one contains monthly data  The format  of each is illustrated below     Table 5  WGEN Site Parameter file contains 2 columns and 12 rows  The first column is the name of the parameter and the  second column is its value  The two columns are separated by the tab key     MeanTmaxDry 76 036964  AmpTmax 21 877216  MeanCVTmax 0 125157  AmpCVTmax  0 076647  MeanTmaxWet 69 8256  MeanTmin 48 341244  AmpTmin 22 346968  MeanCVTmin 0 196495  AmpCVTmin  0 14403  MeanRDry 460 0  AmpR
27. 3 m J E J ra   Tallahassee  FL 16 76 ml E E J ra   Tampa  FL 5 79 m n Bi J ra   Wauchula  FL 99 97 m v  m   v  ra   Christchurch Airport  NZ 30 00 m v  Da J wi   Darfield  NZ 50 00 ml v    J E   Hororata  NZ 40 00 mi v    J E   Lincoln  NZ 25 00 m  v   v  E E   Winchmore  NZ 100 00 m  v   v  J      Ada  OK 310 90 m J J J iv   Altus  OK Irr Res Sta 420 62 m m    J lv    Antlers  OK 152 40 m i J J a   Ardmore  OK FAA Airport 222 50 m LJ E DU Pa   Arnett  OK 749 81 m  1  E J a   Bartlesville  OK 219 46 m Bl E E vl   Databases Bear Mountain  OK Tower 243 84 m LJ E   _  Pa  Oklahoma Reaver NK TSS Of ml     i   fl                                   5      s  E  a  S  5       Add a new weather station   Edit a weather station   i    Preference   Java Application Window    Figure 32  Screen displaying weather stations in the database along with the types of data available for each station            Page 46       Rainfall information of Wauchula  FL  5 x   File                               Se Oa ew re eS       _  ii       p  ro            ote                         un            Oo                                          _              Figure 33  Example of display of rainfall data obtained by double clicking on the rainfall checkmark for the Wauchula  F1  weather station                             velina                                             msi   ont   pe   pont  dont   pei  font   p   poni  font   nt   poni  font   p   poni   p  pn   p  n        Java Application Window   
28. 72 0 000 m  100 0  2 Fort Cobb  OK Fort Cobb  OK demand  Begin 03 01 1972 100  Caddo Eufaula Sand Euf 1 Cotton    2 4 D ACID 06 01 1972 0 000 m  1 0  3 Fort Cobb  OK Fort Cobb  OK demand S  Next    Details   Edit   Delete Back   Java Application Window    Figure 12  Screen for selecting soil chemical systems to be used in graphs        A  E              ERRE    4                       Page 22    Table 1  Parameters listed in short description of soil chemical systems in Graphics option     Area Soil Name Crop  Chemical Name Appl  Date Appl  Depth Appl  Amount  Rainfall Source PET Source Irrigation Type       Date Simulation Begins Number of Simulations   The second step in defining the systems to be displayed is to choose the years of interest for each soil chemical system  If only  1 year is of interest  that year is highlighted in the column labeled  Available Years  and moved to the column labeled   Desired Years   This selection process is repeated for each selected soil chemical system  In the example shown in Figure 13   all of the available years were selected by using the   lt  lt   button  That means the system will draw 100 lines for each system  since that is the number of simulations specified in the weather panel  Figure 8   If the default color chosen by the computer is  not satisfactory  a new color can be chosen by pressing the  Choose Color  button at the bottom of the screen                   Chemical Movement in Layered Soils    File Data Requirements Help 
29. CHEMICAL MOVEMENT IN LAYERED SOILS  CMLS    Java Web Start Version    By    D L  Nofziger and Jinquan Wu  Department of Plant and Soil Sciences  Oklahoma State University    Stillwater  OK 74078    Revised May  2005    PURPOSE OF PROGRAM    CMLS  Nofziger and Hornsby  1986  1987  was written to provide a tool for managing agricultural chemicals  The interactive  program was written in a manner which is easy to use  The software includes graphical output to aid in understanding and  comparing simulated movement and fate of chemicals  The model was designed to use soil and chemical parameters which are  readily available  The model is being used widely  especially in educational settings  Recently  it has been compared with  experimental measurements and with other models with good results  Pennell et al   1990  Nofziger et al   1994   Because the  model requires only basic soil properties which are readily available or easily estimated  the model has been used for  evaluating the impact of pesticides on large areas  A batch program using the computational algorithms of CMLS was  developed and interfaced with geographic information systems  Zhang et al   1990  Ma  1993   This batch program facilitated  simulation for many soils and chemicals with minimal user effort     CMLS was originally written for MS DOS computers in the early days of interactive software  It was revised in 1994 to  include  1  functions for estimating daily infiltration and evapotranspiration from daily we
30. ater passing the  chemical  If Dc t  represents the chemical depth at time t and q represents the amount of water passing that depth during time  dt  the depth of chemical at time t dt is given by         q  Do t dt  Dc t   RO  1     where Orc is the volumetric water content of the soil at  field capacity  and R is the retardation factor for the chemical in the  current layer of the soil  The retardation factor is given by    K  R 1  hd  2   rc  where p is the bulk density of the soil and Kg is the partition coefficient or linear sorption coefficient of the chemical in the  soil  Equation 2 assumes the sorption process can be described by the linear  reversible  equilibrium sorption model  The    partition coefficient  Ka  depends upon the soil and chemical properties  However for many soils and organic chemicals it can  be estimated from the organic carbon partition coefficient  Koc  using the equation    where OC is the organic carbon content of the soil  Hamaker and Thompson  1972  Karickhoff  1981  1984   This equation is  used in the model to estimate K4 for each layer of each soil  However  the user can enter a specific Ka for each layer if that is    Page 3    known     ASSUMPTIONS IN CHEMICAL MOVEMENT    Chemicals move only in liquid phase    Dispersion of the chemical can be ignored    Soil and chemical properties are uniform within a soil layer    All water in the profile takes part in the flow process  Water already in the soil profile is pushed ahead of infiltrati
31. atforms as well as on Linux and MacOS X  We recommend 256 MB or more of Random Access Memory  Approximately 40  MB of disk space is required     Before a Java Web Start program can be used on a computer  the supporting software must be installed  This is needed only 1  time per computer no matter how many different applications use it  Sun Microsystems Inc provides this package free of  charge at http   java sun com products or it can be downloaded here  If this is the first time you are using it  just download the  file from the site above  Follow the instructions given there for installations  I recommend that you accept the default values  proposed in the install process     After you have installed the Java Runtime Environment on your computer  as described in the preceding paragraph   click    here to download and start the program  If you use the program more than one time  you will be given the option of storing an  icon for the program on your local computer  You can then start the program without being connected to the internet     Page 2    MODEL PROCESSES AND ASSUMPTIONS    In this section  the conceptual and mathematical framework of CMLS98B is presented  As that is done  we have attempted to  identify major simplifying assumptions which were used  We strongly recommend that you evaluate the appropriateness of  these assumptions for the systems of interest to you  We have found them acceptable for many problems  but you must keep  them in mind when interpreting re
32. ather records   2  irrigation routines    3  a stochastic weather generator  WGEN   4  Monte Carlo simulation using different weather sequences at a particular site    5  an improved user interface   6  expanded graphics options and increased resolution  and  7  database management features   CMLS94 was also written for MS DOS computers  We soon realized that a batch version of the software was needed to enable  users to simulate movement of many chemicals through many soils with little user input and to store output in files for later  processing  That software  called CMLS98B  includes the computational algorithms used in CMLS94 without the interactive  features used to define soil   chemical   management systems  to select and display graphs and reports of simulated results  to  manage databases  and to display on line help  CMLS98B was written in standard C and can be used on any platform  supporting standard C     With the advent and popularity of the Windows operating system  users requested and expected a version of CMLS with a    graphical user interface  This manual describes CMLS2000  a version of CMLS designed with a graphical user interface and  enhanced capabilities     Page 1    COMPUTER PLATFORMS AND SOFTWARE INSTALLATION    The software is written in Java and runs as a Java Web Start application  The Java run time package and Web Start software  are available free of charge from Sun Microsystems  Inc  The program was developed and tested on various Windows  pl
33. ch soil chemical combination  These are listed in  Figure 12 as available systems  An abbreviated description of the system is found beside each number  Table 1 describes the  content of this description  Full details of the soil chemical weather system can be viewed  printed  or stored in a file by  pressing the Details button     One or more soil chemical systems are highlighted and moved to the Selected Systems window  Each selected system is  assigned a color  This is the default color used for lines from this system  The  Edit  button displays the partition coefficient  and half life for each soil layer based on soil and chemical properties in the database  These parameters can be edited in this  screen if the user wants to use other values  When editing has been completed for all systems selected  the  Next  button is  pressed and the screen illustrated in Figure 13 is displayed         sei              Chemical Movement in Layered Soils i Sa i     x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Select Soil Chemical Systems to be Displayed    Select one or more soil chemical systems to be displayed on this graph   Then press the button to select the years of interest     Available Soil Chemical Systems Selected Systems    Caddo Cobb Loamy Sand Cobb 1 Cotton   1 al  2 4 D ACID 06 01 1972 0 000 m  1 0 A 3  1 Fort Cobb  OK Fort Cobb  OK demand A  Begin 06 01 1972 100 CA  Caddo Cobb Loamy Sand Cobb 1 Cotton A    ALDICARB 05 01 19
34. change with soil temperature as developed by Wu and  Nofziger  1999   Temperature dependent degradation requires additional parameters which are often not available  If those  data are known for a particular chemical they can be entered on this screen and used in the calculation  The impact of  temperature upon degradation can be observed by means of the Temperature Dependent Degradation Interactive Software of  Nofziger and Wu  2003      Units  The software supports metric units or English units when reporting and entering length related units  The type of unit  selected on this screen determines the length units used in the remainder of the program     Evapotranspiration Estimators  This screen enables the user to choose the evapotranspiration estimator to be used when  potential evapotranspiration is calculated from weather data  Parameters needed by the estimators are also entered on this  screen  The Computations section of the manual provides more details on these estimators     Storing Preferences  Preferences defined on this screen can be stored in a disk file for use at another time  To store the  preferences  press the  Select  button in the lower right corner of the screen  This will allow you to select the folder and file  name in which the preferences will be stored  To load preferences from a file saved at an earlier time  press the Select File  button next to the  Load From  file name and then select the folder and file containing the desired preferences     Pa
35. d at a specified time interval during the irrigation season  In the second case  irrigation is  scheduled by the available water remaining in the root zone  During the irrigation season  this demand mode of irrigation  applies water whenever the amount of available water in the root zone is decreased below some critical depletion level  The  amount of water to be applied is calculated by dividing the amount of water needed to return the root zone to field capacity by  the application efficiency  If this calculated amount of water needed is less than the minimum amount of water which can be  applied by the system  the minimum amount will be applied  For example  if 30 mm of water is needed to return the soil to  field capacity and the application efficiency is 75  and the minimum amount which can be applied is 35 mm  the amount of  water applied would be 40 mm  30 mm 0 75   40 mm which is larger than 35 mm minimum   If the application efficiency is  90   35 mm would be applied  30 mm  90   33 3 mm which is less than the 35 mm minimum      ASSUMPTION ABOUT IRRIGATION    1  All irrigation water infiltrates into the soil     Page 9    SOFTWARE INTRODUCTION    Figure 1 shows the opening screen of CMLS  Along the left side of the screen are options needed to define soil chemical   management systems and to view the results in graphical and tabular forms  It also includes an option for managing the  databases used in CMLS so new soil  chemical  and weather data can be added or modif
36. diting data for an existing one is carried out using the screen shown in Figure 37  The left column  provides information on the weather station location and units used for precipitation and temperature  The right column  enables users to select the type of data available at this site by placing a check mark in front of each data type and to select the  data file names that contain this information     The rainfall  temperature  and evapotranspiration data files are stored in tab delimited text format  The first line of the file is a  header line identifying the data present  The rainfall  temperature  and PET data for a single station can be stored in a single  file or in separate files  Table 4 illustrates the file format for a portion of the data from Wauchula  FL  Each file must begin  with the columns of Year  Month  and Day  Other columns may be Rainfall  MinimumTemperature  MaximumTemperature   and PET     Page 49    2 Add weather station          Figure 37  Screen for defining characteristics of a weather station and files names for different types of data available for that  station     Page 50    Table 4  Sample of weather data file for Wauchula FL  First line identifies contents of file  AIl entries are separated by Tab  keys     Year Month Day Rainfall MinimumTemperature MaximumTemperature    1950 1 00 49 0 86 0  1950 2 0 0 45 0 69 0  1950 3 0 0 37 0 70 0  1950 4 0 0 47 0 84 0  1950 5 0 0 62 0 82 0  1950 6 00 56 0 81 0  1950 7 0 0 64 0 82 0  1950 8 0 0 64 0 77 0  
37. eather  Irrigation  Graphics  Reports  Databases  Peifarincn Add a new area   Delete an area                Java Application Window       Figure 26  Screen for adding a new geographical region or area  editing the names of existing regions and areas  or deleting  areas from the database  Warning  Deleting an area deletes all data associated with that area     Page 40    Soils and Soil Properties  Selecting the  Soils  tab on the Database option results in a screen similar to that in Figure  27  Soils already in the database are listed for each region and area  Selecting one of these soils and pressing the  Edit an  existing soil  button at the bottom of the screen enables one to modify the data for that soil   Pressing the button to add a new  soil results in the screen shown in Figure 28  Soils can be removed from the database by selecting the soil and pressing the   Delete an existing soil  button           Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction    Databases     Java Application Window         lo  x           Choose the desired table from the database                                    Jackson Albany Sand      AlbanyS 2 1 0  Florida Jackson Apalachee Clay Apalachee 3 1 0  Florida Jackson Bethera SL Bethera 4 1 0  Florida Jackson Blanton Coars    Blanton l 6 1 0  Florida Jackson Blanton Coars    Blanton 2 7 1 0  Florida Jackson Bonifay Sand Bonifay l 8 1 0  Florida Jackson Bonifay Sand Bo
38. ependent crop coefficients  kcrop t   That is    ET t    K crop  t ET 9  t   1 7     Values of kcrop t  are obtained by linear interpolation between tabulated kcrop t   values where t  is time measured from the  date of planting     For the pan evapotranspiration method  the reference crop evapotranspiration is given by  ET  t   K ePan t   18   where K is a pan constant and Pan t  is the pan evaporation amount on day t   In CMLS98B the SCS Blaney Criddle estimate of ETo is calculated by dividing the estimated monthly consumptive use by the  number of days in the month  Each day in the month then has the same ET value  The consumptive use  U  for the month is    obtained using the equation    Temp    p  100    U K  19     where K is the consumptive use factor specified by the user  Tempr is the mean monthly air temperature in degrees Fahrenheit   and p is the mean monthly percentage of annual daytime hours  Jensen et al   1990   A table of values of p as a function of  latitude from 0 to 64 degrees is built into the software  The mean temperature is taken as the mean of the high and low  temperatures for each day in the month  The value of U calculated in equation 19 has units of inches   The reference crop evapotranspiration for the FAO Blaney Criddle method is given by   ET   a bef  20   where a and b are constants for a particular site and    f   p 0 46Temp    8 13   21     Here p is the mean daily percent of annual daytime hours  and Tempc is the mean air temperature in de
39. ge 53         Chemical Movement in Layered Soils     E    o  x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Preferences              Degradation  cai     Degradation rate constant does not change with temperature       Degradation rate constant depends upon soil temperature  Chemical  Max Daily Temp    C  35 Thermal diffusivity  m  day  5  Crop Min Daily Temp CC   10 Date of Min Temp January Y  1 v   Reference Temperature  if not available in Chemical Database    C   25  Weather Activation energy  if not available in Chemical Database  KJ mol   40  Uniti  Irrigation rm        Metris Depth m Infiltration mm      i Evapotranspiration mm  Graphics Missioni  e e E  Evapotranspiration estimators  Reports   SCS Blaney Criddle k   1 00     FAO Blaney Criddle a  1 00 b  2 00  Databases  Load preference from file or save preference to file  Preference Load from  File name Select Save to  File name Select        Java Application Window    Figure 38  Screen for selecting general preferences to be used in the program     Page 54    References    Bergstr  m  L F   and N J  Jarvis  1994  Evaluation and comparison of pesticide leaching models for registration purposes   Overview  J  of Env  Sci  and Health  Vol  A29 6  1061 1072     Haan  C T   B J  Barfield  and J C  Hayes  1993  Design hydrology and sedimentology for small catchments  Academic Press        Hamaker  J W   and J M  Thompson  1972  Adsorption  In Goring  C A  I   and J W  Hamaker
40. grees Celsius  Jensen et  al   1990   The mean temperature is taken as the mean of the high and low temperatures for each day in the month  ETo in    Page 8    equation 20 has units of mm     Weather Generating  CMLS98B incorporates the stochastic model for generating daily weather variables  developed by Richardson and Wright  1984   This software uses parameters derived from 10 or more years of daily weather  data at a site to generate daily rainfall  minimum and maximum temperatures  and radiation characteristic of the site  WGEN  enables one to examine the behavior of chemicals at a site which has only limited historical data  It is used to determine  probability distributions for chemical fate and transport at a particular site  Since future weather is not known at the site  the  model can be used to generate many independent sequences of weather data typical of that site  By simulating the movement  of the chemical for each weather sequence  probability distributions can be determined for soil   chemical   management  systems of interest     The publication of Richardson and Wright  1984  includes a program for extracting the parameters needed to generate weather  from historical weather data     Irrigation  The irrigation module is capable of applying water in two primary modes  in addition to using actual  irrigation stored in a data file   In the first case  irrigation is scheduled by the calendar  In this mode  called periodic  a  specified amount of water is applie
41. he Cobb Loamy Sand and the Eufaula Sand soils  Line colors correspond to the    colors of the system numbers shown in Figure 17                 Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS       Introduction Define Cumulative Probability Graph of Interest                                  Soil Probability of Exceeding  Different Depths at a Specified Time After Application T    Chemical Time of Interest  days after application   365  Crop     Summarize systems individually    Combine all systems  Available Soil Chemical Systems Selected Syste     Weather Caddo Cobb Loamy Sand Cobb 1 Cotton 1 E  2 4 D ACID 06 01 1972 0 000 m  1 0  gt  3  Irrigation 1 Fort Cobb  OK Fort Cobb  OK demand  Begin 06 01 1972 100 z     Graphics Caddo Cobb Loamy Sand Cobb 1 Cotton  ALDICARB 05 01 1972 0 000 m  100 0  lt   Reports 2 Fort Cobb  OK Fort Cobb  OK demand  Begin 05 01 1972 100 PE    A  Databases  Details Edit Delete Choose color   Back Finish  Preference          Java Application Window       Figure 17  Screen for selecting soil chemical systems and probability distribution of interest     Page 29                 Chemical Movement in Layered Soils Bie i    Dj x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Probability of exceeding different depths 365 days after application    0 6  0 5  0 4    Probability    Reports 0 1 2 3 4 5 6 7    Chemical depth im     Change limits on the graph
42. ied and saved in computer files for use  at a later date  The Preferences button allows the user to select units used in the displays and certain computational schemes  used in the software     Soil and weather data are associated with different geographical regions of the world  The user selects the geographical region  of interest in this opening screen           Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS       Introduction Introduction             Soil  CMLS is a model designed to assist managers of agricultural chemicals  by predicting the movement and fate of pesticides applied to soils   Chemical The buttons on the left allow the user to select soils  chemicals  crops   weather stations  and irrigation strategies for the area of interest   Crop Results can then be displayed in graphs and tabular reports   Weather  livication The databases are organized by geographical regions of the world     Please select the region of interest from the list below   Graphics  Reports  Databases  Preference        Java Application Window    Figure 1  Introductory screen of CMLS2000  The geographical region of interest is selected here     Page 10    Soil Selection    Figure 2 shows the screen used to select one or more soils of interest  Each geographical region of interest can be broken down  into areas  When the user selects the area of interest  available soils from that area are displayed in the list of available so
43. il           Chemical    Crop    Weather    Irrigation    Graphics    Reports    1  1  1  1  1  1  1  1  1  1  1  1  1  1  1  1  1  1  1       Databases    Preference    F ava Application Window       Figure 25  Sample summary report of chemical depth after 365 days  Note that the depth is shown in increasing order  The year  in which the application corresponding to that depth was made is also listed     Page 38    Databases    CMLS requires a substantial amount of data  but the data are generally available or easily estimated  A small amount of data  are provided with the software primarily so users can examine the capabilities of the software before needing to enter large  amounts of data  If users want to utilize the software for their soils  crops  weather and chemicals  they will need to expand the  database to include their local data  This part of the software is designed to enable users to expand the database for their own  use and to store it on their local computer  Figures 26 to 33 illustrate the data entry and editing screens     Soils  crops  and weather have strong geographical dependencies  Soils are identified with a specific region of the world   possibly a country or a state  and a local area within the region  possibly a county or district   Crops and weather stations are  identified with a specific region of the world  Chemicals are not identified with any region since the chemical properties stored  in the database are much less dependent upon location  
44. ils   One or more available soils can be highlighted and added to the list of selected soils  In this case  three soils from the Caddo  area were selected          Chemical Movement in Layered Soils ae i  lol x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Select Soils of Interest                               Soil What is the name of the soil in the area of interest   Chemical You may select several soils from one or more areas   Each soil will be used with the each chemical selected   Crop Area  Caddo     Weather  Available Soils Selected Soils  Irrigation Cobb Loamy Sand Cobb 2 Caddo  Cobb Loamy Sand Cobb 1  Cobb Loamy Sand Cobb 3 L  I a eee  Eufaula Sand Euf 3  gt     Reports McLain SCL McLain    Noble Noble 3  Dalla Port SC Port  lt  lt   Teller Loam Teller  Preference View Soil Properties        Java Application Window       Figure 2  Screen for selecting soils of interest     At the bottom of the screen for selecting soils  is a button that can be used to view the soil properties of the selected soils  That  screen is illustrated in Figure 3  Here the organic carbon content  bulk density  volumetric water content at field capacity  FC    volumetric water content at permanent wilting point  PWP   and porosity of each soil layer are displayed     Page 11          Chemical Movement in Layered Soils    File Data Requirements Help  Chemical Movement in Layered Soils   CMLS    Introduction    Soil    Chemical    Crop    Weather   
45. iminate the noisy fluctuation  they can also be estimated from observed annual maximum and minimum temperatures  Wu  and Nofziger  1998      ASSUMPTIONS IN STEP 5    1  The degradation is a first order process   2  All chemical in the soil degrades at the rate determined by the location of the center of mass     Page 6    Infiltration Estimation From Rainfall  CMLS requires daily infiltration amounts as described above  CMLS required the user to  estimate this daily infiltration and enter it into infiltration files  CMLS98B provides the user with the option of having the  system estimate infiltration from daily rainfall  The capability of estimating these amounts is useful for simulating movement  at many locations and for Monte Carlo simulations at a particular site  The USDA SCS curve number technique  USDA SCS   1972  Haan et al  1993  was incorporated for estimating infiltration  The amount of water  I  infiltrating a soil due to  precipitation  P  is given by       2  jap tol  iso  13    P  0 8S       P for P  lt 0 2S    where the retention parameter S is given by    S  Syn 1 0  So  14   W MAX    WSrorat is the current amount of water stored in the root zone as given by equations 4  amp  5  WSmax is the maximum water  storage capacity of the root zone  obtained using equations 4 and 5 with 0 j t  replaced by the saturated water content  Osar    Smax is an estimate of the largest S for this soil and is estimated by the equation       Sax    cn  1    15   with  10 0 058CN 
46. ive infiltration corresponding to a specified amount of chemical remaining  e Cumulative infiltration resulting in specified cumulative drainage  e Cumulative infiltration resulting in specified cumulative flux density passing chemical  e Cumulative drainage at a specified time after application  e Cumulative drainage corresponding to movement to a specified depth  e Cumulative drainage corresponding to a specified amount remaining  e Cumulative drainage resulting from a specified amount of infiltration  e Cumulative drainage corresponding to a specified cumulative flux density passing chemical       Page 28    Cumulative probability distributions of results for more than 1 simulation  Cumulative probability  distributions are often more useful than histograms to summarize results  Choosing this option on the screen shown in Figure  11 and pressing  Next  yields the screen shown in Figure 17  Here the user can select the soil chemical systems to be  summarized and the type of probability distribution to be drawn  Types of probability distributions are shown in Table 4  The  user can also choose to draw separate probability distributions for each soil chemical system or they can create a single  distribution for several systems  The combined approach is often of interest when the the different soils selected represent  different pedon properties of the soil found in the same management unit  In this example  Figure 18 shows separate  distributions are drawn for 2 4 D acid in t
47. l chemical weather management systems  The second summarizes groups of simulations using histograms   The third summarizes groups of simulations as probability distributions  The final group ranks soil chemical systems for their  potential to leach to groundwater           Chemical Movement in Layered Soils y a   o   x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Select Type of Graph       Soil Select the Type of Graph Desired   Chemical       Line graph of results from individual  simulations  Crop z      Histograms of results of more than 1  Weather pmnan  ia    Cumulative probability distribution of  Irrigation  results of more than 1 simulation  pal    Rank by retardation factor or  by attenuation factor  Reports  Next  Databases  Preference       Java Application Window       Figure 11  Screen for selecting types of graphs to be displayed     Page 21    Line graphs for individual simulations  Figures 12 14 illustrate the steps for creating line graphs for individual  simulations  Although this option shows data from individual simulations  many lines can be drawn on the same graph  These  can be for different soils  different chemicals  different crops  different weather  or different irrigation practices  The first step   illustrated in Figure 12  is to select the soil chemical systems to be shown on the graph  When more than one soil or chemical  is selected in the earlier screens  the system creates input parameters for ea
48. model output are the same as the units assumed when these amounts were entered            Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Select Chemicals and Application Parameters                            Soil What chemicals should be used in the simulation   Chemical You may select up to 20 chemicals The same chemical can be entered more than once   Each chemical selected is used with each soil selected   Crop Press the button below to enter the application date  depth  and amount for each chemical   Weather Available Chemicals Selected Chemicals  ABEMECTIN AVERMECTIN  2 4 D ACID  Irrigation ACEPHATE   ALDICARB  ACIFLUORFEN SODIUM SALT  Graphics ALACHLOR  gt  gt   ALDICARB  Reporte ALDOXYCARB  ALDICARB SULFONE   lt   AMETRYN  AMITROLE _ lt  lt     Databases ANILAZINE  iti Enter Application Parameters          Java Application Window    Figure 4  Screen for selecting chemicals to be simulated in each selected soil     Page 13          Chemical Movement in Layered Soils 4 E  ioj x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Enter Application Parameters for Each Chemcial    Chemical Appl  Date Appl  Depth   Appl  Amount   koc   HalfLife Critical    __ amm dd yyyy  m  mlg  days  Concentration  2 4D ACID 06 01 1972 0 0 1 0 20 0 10 0 70 0    ALDICARB 05 01 1972 0 0 100 0 30 0 30 0 10 0    Soil             Chemical    Crop    Weather    Irrigation    Gra
49. ng  water in a piston like manner    5  The sorption process can be described by the linear  reversible  equilibrium model     RAMPE    Water Balance  cMLS98B evaluates the depth of the chemical using equation 1 with dt equal to one day  This means  that q  the amount of water moving downward past the current location of the chemical  must be estimated each day  In this  model q is equal to the amount of water entering the soil surface minus the quantity of water which is stored in the soil profile  above the chemical  The quantity of water stored depends upon the amount of water entering the soil surface  the wetness of  the soil before infiltration and the capacity of the soil to store water  and the current chemical depth  Daily infiltration amounts  are read from a file or are estimated from weather data as described on the following pages  At the beginning of simulation  the  soil is assumed to be at field capacity at all depths  Each day the water content in the root zone is reduced by the amount of  evapotranspiration on that day  Thus the water content throughout the root zone can be determined   The soil water content is  never reduced below the water content at permanent wilting point   Knowledge of the water content distribution enables one to  calculate the water storage capacity above the current chemical depth  Hence q can be determined  Thus  for each day  simulated  1  the water content in the root zone is adjusted for evapotranspiration   2  the water content
50. nifay 2 9 1 0  Florida Jackson Dothan LS Dothan l 17 1 0  Florida Jackson Dothan LS Dothan 2 18 1 0  Florida Jackson Dothan LS Dothan 3 19 1 0  Florida Jackson Duplin FSL Duplin l 20 1 0  Florida Jackson Duplin FSL Duplin 2 21 1 0  Florida Jackson Esto LS Esto l 22 1 0  Florida Jackson Esto LS Esto 2 23 1 0  Florida Jackson Esto LS Esto 3 27B 1 0  Florida Jackson Esto LS Esto 4 63B 1 0  Florida Jackson Faceville LFS  Faceville l 24 1 0  Florida Tarkean ____ Facewlle LES __ Fareaillett  25  L     Add a new soil   Edit an existing soil   Delete an existing soil                  Figure 27  Screen for adding  editing  or deleting soils and their properties     The screen shown in Figure 28 is used to enter new soils into the database  The region and area in which the soil is located are  selected from the lists at the top of the screen  The soil name  pedon identifier  and map unit can then be entered  The  maximum root zone is the maximum root depth expected for any crop in this soil  If the root depth specified in the Crop option   Figure 6  exceeds this depth  the maximum root depth will be used in the simulation  Otherwise the root depth specified on  the Crop screen will be used  The curve number is the value for the SCS curve number for this soil crop tillage system and is  used for partitioning precipitation into infiltration and runoff     Page 41    The lower part of the screen enables the user to enter soil properties for each soil layer  New lines are added as needed f
51. or  additional layers  The software supports up to 20 layers in a soil  When all data for the soil have been entered  it can be saved  in the database by pressing the Save button      gt  Add a soil    _ Cancel    pra e ois OC ah ATA oe neo Re POI AO NEO       Figure 28  Screen for adding a soil to a region and area and for entering the properties of 1 to 20 soil layers  A similar screen  can be used to edit properties of a soil already stored in the database     Page 42    Chemicals  Selecting the Chemicals tab on the Database screen produces the screen shown in Figure 29  Values can be  edited by selecting the item of interest and entering the value of interest  To add a new chemical  simply press the  Add a  chemical  button  and enter the values on the blank line that appears at the bottom of the table  To save the data for use at a  later time  use the Export User Data option on the File menu          Chemical Movement in Layered Soils i iA    o  x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Choose the desired table from the database          i Chemicals  Soil i   Da  Chemical Koc Half Life Critical   mlg   days  Concentration  Chemical 1 3 DICHLOROPROPENE 32 0 10 0   4 5 T ACID 80 0 24 0   4 5 T AMINE SALTS 80 0 24 0  Crop  4 5 T ESTERS 1000 0 24 0  4D ACID 20 0 10 0      D DIMETHYLAMINE SALT 20 0 10 0  Weather     D ESTERS OR OIL SOL  AMINES 100 0 10 0   4 DB BUTOXYETHYL ESTER 500 0 7 0     4 DB DIMETHYLAMINE SALT 20 0 10 
52. ot zone  depth passes all depths below that     ASSUMPTIONS IN STEP 2    1  Infiltrating water recharges one layer of soil to field capacity before water moves deeper into soil   2  Infiltrating water redistributes instantly to field capacity   3  Water content of soil below the root zone is never less than field capacity     Step 3  Calculate Flux Passing Chemical  The flux of water  q  passing the depth of the chemical is equal to the flux of water  passing the root zone depth if the chemical depth exceeds the root zone depth  If the chemical depth is less than the root zone  depth  the flux  q  is equal to I Jc  t dt  given in equation 8 where Jc is the index of the layer with bottom at the chemical  depth  If the infiltrating water is stored before reaching the bottom of layer Jc  q is zero     Step 4  Calculate New Chemical Depth  The depth of chemical at time t dt is calculated using equation 1 for each soil layer  If  q equals zero  Dc t dt    Dc t   NOTE  If q obtained in step 3 is larger than needed to move the chemical to the bottom of the  next layer  the excess must be calculated and used in equation 1 with appropriate properties of succeeding layers     Page 5    Step 5  Degradation  Degradation of the chemical in the soil is assumed to be described by first order processes  The amount of  chemical remaining in the soil at time t dt is given by       M t   dt    M t 0 5  af ife0  10     where M t  and M t dt  represent the amount at times t and t dt  respectively
53. phics    Reports       Databases       Preference Back        Java Application Window       Figure 5  This screen enables the user to define the application date  application depth  and application amount for each  selected chemical  The organic carbon partition coefficient  half life  and critical concentration are displayed but cannot be  edited here     Page 14    Crop Selection    The amount of water lost by evapotranspiration depends upon the crop growing in the field of interest and the season of the  year and the root depth of the crop  The software calculates potential evapotranspiration for a reference crop from weather  data  This amount is multiplied by a crop coefficient to obtain the potential evapotranspiration amount for each day of the  simulation  These parameters for a crop can be defined in the database option  Figure 6  illustrates the screen for selecting the  crop of interest  Root depth  and crop coefficient values can be edited in this screen but values are not saved permanently in the  database  Crop coefficients between dates listed are obtained by linear interpolation             Chemical Movement in Layered Soils    File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Select Crop Growing in the Area                                                                                                 Soil  Crop    Cotton x  Chemical  Root Depth  m    0 900  Crop  Date Crop Coefficient Date Crop Coefficient  Weather  Jan
54. sults of this model just as you must do when using any model  Comparisons of transport  models which include CMLS have been published by Pennell et al  1992  and Bergstr  m and Jarvis  1994      Chemical Movement  The basic computational part of CMLS94 and CMLS98B is the same as that used in CMLS   Nofziger and Hornsby  1986   A summary of the model is presented here so changes and assumptions can be noted and  evaluated     The model is a modification of the work of Rao  Davidson  and Hammond  1976   It estimates the depth of the center of mass  of a non polar chemical as a function of time after application  It also calculates the amount of chemical in the soil profile as a  function of time     The model assumes that chemicals move only in the liquid phase in response to soil water movement  All of the water in the  soil is active in the flow process  Water already in the profile is pushed ahead of the inflowing water in a piston like manner   Water is lost from the root zone by evapotranspiration and deep percolation  Movement of the chemical is retarded by its  sorption on the solid soil surfaces  The linear  reversible  equilibrium model is used to describe this sorption process   Dispersion of the chemical is ignored  The soil profile can be divided into 20 layers with different properties in each layer  Soil  and chemical properties are uniform within a layer     Since the chemical moves with soil water  the change in depth of the chemical depends upon the amount of w
55. t the same day of year for all years available in the weather  file following the application date specified for the chemical  In this example  the chemicals were applied in 1972 so only 3 or  4 applications are possible  depending upon the number of days to be simulated   If the application date were in 1948  a total of  28 simulations would be possible  The number of simulations desired is specified on this screen as  Number of years      Page 16       Chemical Movement in Layered Soils E  5  x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS    Introduction Select Source for Daily Rainfall and Evapotranspiration                      Soil  Chemical    Daily rainfall and PET    Historical Weather    Weather Generator  Crop  Weather  Rainfall Source    Fort Cobb  OK    Irrigation  Evapotranspiration Source  Fort Cobb  OK v  Graphics  Data Exists for years 1948 to 1975  Reports  Number of years   28  Databases  Preference        Java Application Window    Figure 7  Screen for specifying historical weather stations to be used in the simulations     Figure 8 illustrates the screen used when the weather generator is the source of weather data  Here the user selects the weather  station of interest  the number of simulations desired  that is  the number of years in which the chemical is applied  and  whether the computer should use a specific seed for the random number generator or just get a seed from the current value of  the computer clock  The results
56. ties along with the region in which they are located     Page 44      Add crop       Figure 31  Screen for entering the name  rooting depth  and crop coefficients for a new crop in a region     Page 45    Weather  The last tab on the Database screen is used to enter and edit weather data  This can be potential evapotranspiration   PET   historical rainfall  historical temperature  or WGEN parameters along with some overall data about the weather station  and its location  The first screen  Figure 32  in this option is a summary of the data available for the site  It includes the name  of the region in which it is located  the station name  and the station elevation  The last 4 columns in the table are used to  indicate the type of data available at this site  A check mark in the box indicates that those data are available  An empty box  indicates that those data are not available  At least one type of data must be available for each station  Double clicking on the  checked boxes will display those data in detail  These are illustrated in Figures 33 36             Chemical Movement in Layered Soils    i i a i    o  x   File Data Requirements Help    Chemical Movement in Layered Soils   CMLS               Introduction Choose the desired table from the database            Please double click the checked boxes to see more details                                                  Station Rainfall PET WGEN  Chemical Name Parameters   Jacksonville  FL 7 93 m a Bl J vl   Miami  FL 2 1
57. uary 1 0 30 July 1 1 00  Irrigation February 1 0 30 August 1 1 00  Graphics March 1 0 30 September 1 1 00  Repas April 1 0 30 Octorber 1 0 80  May 1 0 70 November 1 0 30  Databases  June 1 0 90 December 1 0 30  Preference        Java Application Window    Figure 6  Screen for selecting crop being grown in the soil of interest and editing parameters associated with that crop     Page 15    Weather    The Weather option  Figures 7 and 8  are used to define sources for daily rainfall and potential evapotranspiration data  required by CMLS  These daily amounts can be obtained in three ways  The first is from data files containing daily rainfall and  daily potential evapotranspiration  calculated outside of CMLS   The second is from daily weather files containing daily  rainfall and maximum and minimum temperatures along with the coordinates of the weather station  The third is by means of  the WGEN weather generator     Figure 7 illustrates the screen for using historical weather  It indicates that the Fort Cobb station has data for 1948 to 1975   That means that the application date specified in the chemical application parameter screen must be in this range or no  simulation is possible  Because the weather at a site has a large impact upon the depth of movement  CMLS enables the user to  easily simulate movement for applications in different years so the user can get insight into the variation expected due to  weather  To do that  the software  attempts to apply the chemical a
    
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