Document - SoilPro
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1. SOILPRO SMS Application Soil Monitoring Software Soil Monitoring So Management SMS application User Manual 1 Table of Contents A ER EN 2 SUSTtEMEREQUIFTEMENES air A O 2 BOSC IVES ato casa ee 2 Partir Use of SIMIS ADDIICALION sssrar lo 4 Coordinate System for Region PelOpONNESUS ccoccccccoconccnonnnonacononarocncnononononnns 5 Coordinate System for Region Sicily coooocccconocononacononanonncnacnnonarononononanons 5 LAUNCHING SIMS ADDINCAUON sud ie 6 SIVIS LSYOUE aia 6 Features or SIVISIADDIICATIONs iia aiii 8 user Management eresse Sane iden N 8 SMS USEF REGISERATOMgartutesienesthagad a 9 User Management OPONE 9 Login In SMS AD PIIGATION iii di 11 Data Manageme Nira anaE EEA aaa 11 Data Load Method Storage MOUNL cccccsssecccsseceeesececesceceeseeeeeeaeeeaees 11 Data Transter to data Servera ts 13 Data Upload asia 14 Dato MDI Rana 15 IMG Data IMPOR 17 Data DOWN a idea 19 Map MS DOING ON gt MSc 19 Color Modification of Layer s color scheme cccooccnnonocnnconnnncncncnnncnoncncnonnnss 20 PNT MAD acch chic cecwesnnedasest see stencsaetew a a a 25 INFO Basic statistical informatiON cccoocncncnocnnnnnnnnnonacononaronnnnononccnncnnnonnns 26 Meta User Detinea metadata caninas 27 Data Hand Bondad n 29 Data CO WAI IAN ral 29 Data downloadme Data viii aia 30 Data downloading Map geo tif formalt ccoooccccnonnccnnncnnncnnnonan2. A Has access to Admin tab section A A A A A A Final VERSION SMS application User Manual 11 Login in SMS Application From the Login Tab users may login to SMS Before logging in the application user must receive an email by the SMS administrator providing a valid User name and a password By signing in the SMS application user automatically initiates a thread on the SMS server All data handling and actions are monitored and handled by this thread Home Peloponnesus Sicily Register Admin User Authentication Username Password sign Ini Illustration 6 SMS login page User may sign in the application By closing the browser automatically he closes the work section and cancels the thread on the SMS server In order to continue user needs to log on to the system again initiating a new thread on the system Data Management In the SMS application user can load data in the application with two different methods By mounting the data repository on his workstation or by using the data load function through the application Two type of data have been tested as of today Raster data grids and vector data shapefiles Raster data can be imported as ASCII grids or img image files ASCII format is a neutral format that can be easily transferred Shapefiles can be imported directly to the SMS application Data Load Method Storage Mount In SMS application user can import data in the application server
3. 9999 9999 9999 9999 9999 59999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 99959 9999 99959 9999 9999 9999 9999 9999 9999 9999 9990 9999 9999 9999 9999 9999 95999 9999 9999 9999 9995 9999 29999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 29999 9999 9999 9999 9990 9999 99997 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 Illustration 27 ASCII File in World Pad The ascii grid file in the header contains information about the size of the grid coverage It contains the number of grid columns ncols the number of rows nrows the coordinates of lower left corner xllcorner yllcorner the grid cell size cellsize and the no data value NODATA_value After the header the grid file body contains values for each cell Data downloading Map geo tif format In SMS application users can download map files in georeference format and the appropriate legend With this files user can create maps in reports or use the information in any GIS system In both cases user must fo
4. ArcMap ArcInfo File Edit View Insert Selection Tools Window Help Deng trex oo s p Joso e RHE BE m e a Georeferencing X Layer dem tif z Y R a as Layers E O Hydronet O shoreline O pelop3 El M dem tif RGB W Red Band_1 MA Green Band_2 M Blue Band_3 EPBZOr GIO SUE DD El 30 2 q gt I Arial y 10 gt sn TIA Ar Le L 554910 51 4249451 36 Unknow o A Illustration 29 Georeferenced layer in arc gis Drawingy A C Gl oaz Final VERSION SMS application User Manual 32 gt Modeling in SMS GIS Model building in SMS is a process of creating new GIS functions from existing functions by simulating a process In SMS models are realized by writing Scripts Scripts are simple text files that A Store commands in a text file that are then executed A Can include parameters that allow a script to be used with many different layers or with different settings A Scripts can be written SMS s model builder Before a user chooses a modeling method and start to work there are a number of steps user should go through A The first and most critical is to determine what the OUTPUT of the modeling process should be A s there a need for spatially explicit or spatially aggregated results or both o Spatially Explicit Result is a GIS data layer E g Dissolving polygon boundaries to simplify the land cover classes in a data layer
5. Models Model List demo_molel Show Delete Run my watershed _dema Show Delete Run Aspect Show Delete Run mydemo show Delete run myls show Delete run My_Hydro_Model show Delete run Terraflow show Delete run g region rast dem P r slope aspect el dem as aspect_30m sl slope_ 30m Illustration 31 Model List Section Available Models User from the Model List can view the model and or can execute run the model The results are found in the Layers section under Location tab Final VERSION SMS application User Manual 35 Home Peloponnesus Models Layers Illustration 32 Model results in Layer Browser There are additional commands which work with DEMs depression areas can be filled with r fill dir and flowlines calculated with r flow Watershed analysis can be done with r watershed and on massive grids with r terraflow For more information please visit http grass fok eu gdp html_grass64 full_ index html Model help file For every model user can attach a help file pdf jpg txt etc By selecting select file user can navigate to the folder where the help file is stored and upload it and attache it to the model Final VERSION SMS application User Manual 36 Model List my watershed demo Show Delete Run Em oy cpyeiou Aev evel vo opyelo Help Upload factor Show Delete Run Em oy apysiou Aev eva vo apyelo Help Upload inp
6. and Final VERSION SMS application User Manual 3 some areas may appear blurry discolored or covered in clouds Generally there is high resolution imagery for populated areas Some remote areas however have high level detail while some urban centers do not depending on the availability of images Zooming in and out increases or decreases the level of feature details on a landscape Where data are out of date some feature details including villages and small roads may be missing or spatially inaccurate Google Maps uses a Layers feature to superimpose details of interest for example Roads Borders Populated Places Terrain etc onto base imagery Google Maps is a web mapping service application and technology provided by Google free for non commercial use that powers many map based services including the Google Maps website Google Ride Finder Google Transit and maps embedded on third party websites via the Google Maps API Google Maps satellite images are not in real time they are several months or years old Google Maps uses a close variant of the Mercator projection so it cannot show areas around the poles A related product is Google Earth a stand alone program which offers more globe viewing features including showing polar areas Final VERSION SMS application User Manual 4 9 Part A Use of SMS Application In Part A of the User Manual user can find a detailed description of the SMS application SMS
7. and handling Extending spatially the areas regions of SMS application is possible by adding a new Location to the central database Any new Location must have a well defined coordinate system and specific extends Only the system administrator of the system have the authority to extend spatially the SMS database Coordinate System for Region Peloponnesus The Hellenic Geodetic Reference System 1987 or HGRS87 Greek EAANVLKO TEwSeTLKO 2vuotn a Avadopac 1987 or El2A 87 is a geodetic system commonly used in Greece The system specifies a local geodetic datum and a projection system In some documents it is called Greek Geodetic Reference System 1987 or GGRS87 HGRS87 datum HGRS87 specifies a non geocentric datum that is tied to the coordinates of the key geodetic station at the Dionysos Satellite Observatory DSO northeast of Athens 38 078400 N 23 932939 E The central pedestal CP at this location has by definition HGRS87 coordinates 380 4 33 8000 N 23055 51 0000 E N 7 m Although HGRS87 uses the GRS80 ellipsoid the origin is shifted relative to the GRS80 geocenter so that the ellipsoidal surface is best for Greece The specified offsets relative to WGS84 WGS84 HGRS87 are Ax 199 87 m Ay 74 79 m Az 246 62 m The HGRS87 datum is implemented by a first order geodetic network which consists of approximately 30 triangulation stations throughout Greece and is maintained by the Hellenic Military Geographical Service Th
8. browser the remaining steps may differ The following example is from IE SS TRAS Aopugdpac es Document b Status Offline I Print to file Preferences Location Find Printer Number of copies fi Selection Current Page C Pages ft T Collate Enter either a single page number or a single pi Bi Bo page range For example 5 12 Illustration 23 Printing in Internet Explorer INFO Basic statistical information Info functions provides all the basic layer information By selecting Info the user will see on screen the following information table Final VERSION SMS application User Manual 27 Layer dem Date Thu Apr 26 12 40 01 2012 M pset peloponnese Login of Creator www data Location grLocation Database Mariara Title dem Timestamp none Type of Map raster Number of Categories 255 Data Type FCELL ows 7266 Columns 7091 Total Cells 51523206 Projection Transverse Mercator NM 4245558 E 4027556 Res 30 E 457749 15625 W 245019 15625 Res 30 Range of data min 0 000000 max 2506 000000 Data Description generated by r in arc Comments rinarc input peloponnesus dem output dem type F CELL mult 1 0 RASTER MAP CATEGORY REPORT LOCATION grLocation Thu Apr 26 21 46 46 2012 north 4445538 east 457749 15625 REGI N south 4027556 west 245019
9. 15625 res 30 res 30 Illustration 24 Basic layer information The table is divided in several parts The first part includes information on the Location of the grass gis database and the creation date in the second part there are information on the projection used and the generation method For example Dem is imported by using the command r in arc input peloponnesus dem output dem type FCELL mult 1 0 Meta User Defined metadata User in SMS has the ability to store user defined set of metadata information There are two sets of metadata available in SMS metadata for Raster and metadata for vector layers In both cases the metadata fields are defined explicitly by the overall administrator in the Admin tab Although the metadata function in SMS is simple in principal it is strongly advised to avoid changes in the structure of the metadata Final VERSION SMS application User Manual 28 table since any change may end up with data lose In the Admin tab administrator adds or deletes fields of metadata for vector or raster layers Pela pin rres us Layers DATE Submit Delete SPATIAL RESOLUTION Submit Delete SOURCE Submit Delete COMMENTS E Illustration 25 Raster metadata table From the Location tab by selecting Meta user can access the metadata database and complete the available fields The procedure for raster and vector data is identical Final VERSION SMS application User Manual 29 D
10. High o value 2606 color B66A1B 5 name Alpine submit Illustration 20 Colormap Selection Tool Manual Color Selection SMS will recreate all image files and maps associated with the specific layer The process will take few seconds A new thumbnail will appear in the Layer section All images and maps associated with any layer are automatically generated in SMS These images can be altered and modified according to user needs if color is selected below the thumbnail A A For viewing the layer user needs to select it by ticking the tick box above the layer s thumbnail Then select map and the selected layer s will be superimposed over google maps base maps At the bottom of the map area layer legend will appear Final VERSION SMS application User Manual 25 sn epg aopug poc J oy ea i is rit 4 oipo dl pliega s dem Illustration 21 Layer with Legend Printing Map SMS users can produce soft copy maps directly from the application Below the map area Users can input the Map Title SMS application User Manual dem Low P Medium Bl High A Alpine ro eee TE pt __ rai Seale ERO Arhopeve xpt Basarsoft Google Tele Atlas Opo Xprjona Title E Wap Digital Elevation Model 8 E Print Illustration 22 SMS Print Function By selecting PRINT user initiates the print function of his browser Depending of the available
11. Illustration 12 Uploading procedure In some browsers user can monitor the upload process of the upload Data Import As soon as data are transferred to data server SMS application reacts and provides information to SMS users on data availability User has to follow the next steps in order to finalize data import to SMS application Login in the SMS application using provided user name and password Select the desired location tab Move to Data Pending section For importing a raster file just select import For shapefile import choose the correct topology first then select import gt eee Final VERSION SMS application User Manual 16 Data Pending area Delete Import Line dem Delete Import Illustration 13 Data Import SMS application understands automatically the data type that is located in the dataserver In the example above dem is an raster ascii file and area is a shapefile User needs to select import in both layers in order to finalize import procedure In the case of raster files by selecting import the final raster layer will be created in SMS In the case of shapefiles user must identify the correct topology of the dataset There are three cases A point shapefile a line shapefile and finally a polygon shape file In the first case user must select point in the second case line and in the third case boundary The result will be visible in the first section of Location tab Layers where thumbn
12. Spatially Aggregated Result is a number or a set of numbers E g Calculating the total area of each habitat type in a given county o Spatially Explicit What form should the final product s take Points lines routes or polygons Spatially Aggregated What attributes are needed in the table s A After determining what the output should contain identify the possible inputs o Layers containing needed attributes o Layers containing the needed points or polygons o Layers that can be used to produce the needed points or polygons E g a point coverage that can be buffered to provide polygons Final VERSION SMS application User Manual 33 Raster map analysis SMS application supports most of the raster functionality of GRASS GIS GRASS is traditionally known for its powerful raster processing capabilities All classical functionality plus time series data processing and models are available While image processing command names differ in the first character i instead of r they are generally fully integrated in SMS application Any image map from an aerial camera or satellite can be used as a normal raster map Additional support is available to handle multispectral maps More sophisticated methods such as orthophoto generation and image classication are supported as well Through GRASS SMS supports pixelwise operations on raster maps as well as focal neighborhood and global full map calculations Also buffe
13. a and models For further information on user management please refer to User Management Options There are 6 distinct tabs in the SMS application Home tab hosts the welcome screen of the application Peloponnesus and Sicily tabs Location tabs enclose the information and models for the two project Locations Login tab and Register tab facilitate user register and access the application Admin tab provides access to functions available only to SMS administrator Peloponnesus Sicily Login Register Admin AAA Illustration 3 SMS tabs All Location tabs have an identical structure When a Location tab is selected user has Final VERSION SMS application User Manual 8 access to Home tab Location tab and Model Tab Home Peloponnesus Models Illustration 4 Peloponnesus Location Location tab encloses four section Layers Data List Data Pending and Data Upload A In Layers user can browse all available layers in the selected location A In Data List user can download data relevant maps or can delete selected layers A In Data Pending section User can import data to the SMS application from the data storage server In Data Upload section user can upload data to the SMS data server Alternative user can have a direct access to the SMS data server by mounting the server in his workstation Under Models tab there are two sections Model List section and Model Upload Form section A In Model List section user may browse available
14. a more suitable palette for the selected layer By selecting Color below the layer s thumbnail the Color Style Selection Tools initiates Final VERSION SMS application User Manual 21 Layers Colorstyle Selection Automatic Jelevation y submit aspect al E Pacte breyr bgyr byg hyr celsius corine curvature of ranges Mm fass Hp ie 255 5 fo B fess iwo FFFFFF grey255 gyr haxby nevi Illustration 18 Color Selection Tool For the Digital Elevation Model there are several predefined color palettes For example elevation provides vivid colors for DEMs Then click submit SMS will recreate all image files and maps associated with the specific layer The process will take few seconds A new thumbnail will appear in the Layer section All images and maps associated with any layer is automatically generated in SMS These images can be altered and modified according to user needs if color is selected below the thumbnail A For viewing the layer user needs to select it by ticking the tick box above the layer s thumbnail A Then select map and the selected layer s will be superimposed over google maps base maps Below user can find a brief description of the basic standard color pallets that are available in SMS application aspect aspect oriented grey colors aspectcolr aspect oriented rainbow colors bcyr blue through cyan through yellow to red bgyr blue through green through y
15. ails will be available for all imported layers In the Data List section user may download raw data and or data in tiff img data User can delete the layer more information in the appropriate sections Although ASCII grid files have a straight forward import procedure for shapefiles import needs more attention by the User A shapefile is actually a set of several files Three individual files are mandatory to store the core data that comprises a shapefile shp shx dbf and other extensions on a common prefix name e g area The actual shapefile relates specifically to files with the shp extension but alone is incomplete for distribution as the other supporting files are required There are a further eight optional files which store primarily index data to improve performance Each individual file should conform to the MS DOS 8 3 filename convention 8 character filename prefix period 3 character filename suffix such as shapefil shp in order to be compatible with past applications that handle shapefiles though many recent software applications accept files with longer names For this same reason all files should be located in the same folder Mandatory files Final VERSION SMS application User Manual 17 A shp shape format the feature geometry itself A shx shape index format a positional index of the feature geometry to allow seeking forwards and backwards quickly A dbf attribute format colu
16. application is a Web application designed to provide support to Local Authorities and soil users with minimum IT knowledge and limited support SMS is a shell application able to host almost any soil monitoring or soil management procedure In order to succeed this SMS development team designed SMS based on GRASS GIS software an open source GIS application SMS takes advantage of the rich functionality of Grass GIS and delivers this functionality over the WEB SMS s architecture is modular The basic modules include the data handling module the data repository soil management monitoring modules and mapping module The application is based on the functionality of GRASS GIS and through a communication channel allows users to communicate with the core GIS software through predefined models or through new scripts SMS database is based on GRASS GIS data structure modified in order to communicate with the web interface All data are stored in a directory referred to as a database located on the web server This directory has to be created on the server by the database administrator Within this database projects are organized by project areas stored in subdirectories called locations A location is defined by its coordinate system map projection and geographical boundaries Each location can have several mapsets When creating a new location GRASS automatically creates a special mapset called PERMANENT where the core data for the project can be s
17. ata Handling Data in SMS can be handled according to user rights There are two types of data that can be handled in SMS Raw grid data initial or produced in raster format and map image data georeferenced images In the first case user can download for the selected layer a compressed file containing the ascii grid file and or the same layer in img file format In the second case user will download a compressed file containing a georeferenced file of the selected layer and the associated legend file in html format The georeferenced file is in GeoTIFF format GeoTIFF is a public domain metadata standard which allows georeferencing information to be embedded within a TIFF file The potential additional information includes map projection coordinate systems ellipsoids datums and everything else necessary to establish the exact spatial reference for the file The GeoTIFF format is fully compliant with TIFF 6 0 so software incapable of reading and interpreting the specialized metadata will still be able to open a GeoTIFF format file User can use GeoTIFF in any GIS or CAD system and associate it with his datasets or can be used as single image for reporting in any text editor or other relevant software The resolution of the GeoTIFF is in accordance with the spatial resolution of the selected layer Legend is in html format and allows the user to increase or reduce size without any detail loses In order to succeed maximum compatibility in the zip
18. by a simple copy paste procedure Initially user needs to mount the storage space of the data server A Open a windows file explorer A Type in the address tab soilprosms dyndns org Final VERSION SMS application User Manual LA soilprosms dyndns org El Ja E Network soilprosms d ndns org File Edit View Tools Help Organize Webwork and Sharing Center View remote printers w Favorites i E ES a Libraries peloponnesu sicily 5 A Homegroup La Computer Lx lala S A Illustration 7 Data Storage Server Available Locations The above path provides access to the data server storage A user name and password will be provided to the user by the database administrator User needs to select the location to upload data Peloponnesus or Sicily Alternative User can mount to his workstation one of the two locations A Right click on the selected location Peloponnesus or Sicily A Select Map Network Drive A Drive will appear as a local drive in user s workstation Final VERSION SMS application User Manual 13 Ll soilprosms dyndns org El Jo pl Network soilprosms dyndns org y Search soilprosms dyndns org File Edit View Tools Help Organize y Network and Sharing Center View remote printers a gt i Y W Favorites 3 Libraries 2d Homegroup Open in new window Add to YLC media player s Playlist E Computer Play with VLC media player ig Ad
19. d to archive l Local Disk C Add to peloponnesus rar 2 peloponnesus soilprosms dyndns org 2 compress and email Compress to peloponnesus rar and email th Network Restore previous versions Y Scan peloponnesus Create shortcut Properties J peloponnesus soilprosms dyndns org Share Illustration 8 Mount Location Data Transfer to data server Drag and drop files to the mapped network drive from any location peloponnesus soilprosms dyndns org 2 T N loj x i italiano ar Greek O go hs Computer peloponnesus soilprosms dyndns org 2 X Ka Search peloponnesus soilprosms dy O File Edit View Tools Help WEBGIS E LEARNING GAl Organize y New folder fil O Sir Favorites 2 Name Date modified Type Size BZ Desktop _ area sbx 15 3 2009 2 42 up 5B File 1 KB lol x J Downloads _ area shp NES 1 Hour remaining 104 data v Search data 2 1 Recent Places E Dropbox Copying 7 items 259 MB E Life projects frida El e de SMS From data C Users aant Docu data to peloponnesus soilpro About 1 Hour remaining Documents library a Libraries A data Arrange by Folder v Documents a Music gt More details Pictures E videos ds xi 2 items The project LIFEOS ENV IT 00428 SOILPRO began S four years until 31st December 2013 SOILPRO is a Local Disk C Environment Policy and Go
20. e initial uncertainty was estimated as 0 1 ppm 1x10 7 However there are considerable tectonic movements that move parts of Greece towards different directions causing incompatibilities between surveys taking place at different times Coordinate System for Region Sicily Please add coordinate system definition Final VERSION SMS application User Manual 6 inching SMS Application d To get started using the SMS web application right away just type the following address into your web browser or click on the link below http www soilpro eu en webgis Alternative go to SoilPro eu and from the main menu choose WEBGIS C ft mww soipro eu enhome Wy Huepo oyio Other LIFEO8 ENVA1T 000428 Language English Italiano Map data OY Basarsott Europa Technologies Google LeadDo sulting ORION ME Tele Atlas Imagery 62011 TerraMetrics Terms of Use Illustration 1 Soilpro wee site The first time you access the application a large amount of information is transferred to your computer and it may take up to 60 seconds for it to load depending on your computer speed internet connection type and server load The average load time is about ten seconds SMS application is linked to the web portal of SoilPro project SMS application is aiming to all soil users and stakeholders For this reason it is designed to facilitate the communication between stakeholders with limited knowledge to IT techniques and with minimum s
21. ed as a single raster file Then user can produce any combination by using the group command Data Pending shoreline Delete dem Delete pl 3r34 img Delete Import Illustration 14 img image import Final VERSION SMS application User Manual 18 Unlike single raster layers one img file may populate one to n layers In the example below there are 8 layers produced landsat image Layers shoreline I p183r34 ime 1 I 183134 img 2 M p133134 ima 4 C p183134 img 5 D p133134 img C Illustration 15 Landsat bands Final VERSION SMS application User Manual 19 Data Browsing The first section in the location tab is Layers In Layers tab all available layers are accessible through a thumbnail image For basic management functions are available through Layers tab A Info o Basic statistical information on layer characteristics A Color o Layer color scheme management A Map o Layer mapping and layer superimpose on google maps o Layer on layer mapping A Meta metadata o Metadata for raster or vector data Layers dem L shoreline C Illustration 16 SMS layer browsing Map Mapping on SMS A For viewing the layer user needs to select it by ticking the tick box above the layer s thumbnail Then select map and the selected layer s will be superimposed over google maps base maps By selecting multiple layers user superimposes them on google maps A Final VERSION SMS applicat
22. ellow to red byg blue through yellow to green gt gt gt A Final VERSION SMS application User Manual 22 A byr blue through yellow to red A celsius blue to red for degree Celsius temperature A corine EU Corine land cover colors A curvature for terrain curvatures from v surf rst and r slope aspect A differences differences oriented colors A elevation maps relative ranges of raster values to elevation color ramp A etopo2 colors for ETOPO2 worldwide bathymetry topography A evi enhanced vegetative index colors A gdd accumulated growing degree days A grey grey scale A grey eq histogram equalized grey scale A grey log histogram logarithmic transformed grey scale A grey1 0 grey scale for raster values between 0 0 1 0 A grey255 grey scale for raster values between 0 255 A gyr green through yellow to red A haxby relative colors for bathymetry or topography A ndvi Normalized Difference Vegetation Index colors A population color table covering human population classification breaks A population_dens color table covering human population density classification breaks A precipitation precipitation color table 0 2000mm A precipitation_monthly precipitation color table 0 1000mm A rainbow rainbow color table A ramp color ramp A random random color table A rstcurv terrain curvature from r resamp rst A rules create new color table based on user specified rules read from stdin A ryb red thro
23. file user will also find a tfw file World file Data downloading Under the Location tab in the Data List section user can select to download data Ascii file or to download tif geo referenced tif with legend and download dataset in img format Data List dem Download Data Download Tif Download Img Delete shoreline Delete dem_img zip a dem_map zip dem zip 1 6 21 8 MB unoAzinowTO 2 1 13 2 MB unoAzinowTO 2 4 30 4 MB unoseinovTo HE Start m windows Task Manager 3 Public on My Book Worl i Downloads 113 Address Book Main Id e Data Browser Goog d Illustration 26 Download options and procedure Final VERSION SMS application User Manual 30 Data downloading Data A Open a windows explorer and navigate to the download folder A Open dem zip A Open the ascii file using world pad it will take few minutes A Examine the file header amp dem WordPad 11 X a o o 4 r Fi d J Courier New li ov Aa a hs Ca p F3 P a Fin S 2 ae d i a Sie gt A 5 Pict Paint Date and Insert nin Sepia Paste B Z U abe X elge X E icture drawing time object iO Select all Clipboard Font Paragraph Insert Editing oooO MOA E ncols 7086 nrows 7254 xllcorner 245019 15625 yllcorner 4027916 5 cellsize 30 NODATA value 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999 9999
24. g Raster Vector Imagery Volumes Databases Help ETA EEE Kad Pez wel ces ose 2 Map Layers for Display 1 Mis Qe Welcome to GRASS GIS Display rows 462 columns 642 resolution 786 307 metres 4694751 037 1639763405 Save Clear A Run Run background Run GUI Run in Xterm Illustration 38 Grass GIS server through SMS Final VERSION a SMS application User Manual 4 Par Need to be compiled Final VERSION
25. ion User Manual 20 Layers 1 E Agrinio 1 Therma a TaN STE map satelite 4 gt A eto Nafpaktos Ee ce n a A E A cl E lades a x i aos e ma a I a a E oo Rio aie y 5 TEAN Me E j E S lera Polis i E Aegio _ Ea Ja Messoleghiou gon E CEA 3 A ra 4 i aT Xylokastro a i Area e E a i sn k Korinthos g Salamina F K Lo EoprbBoc mr aeir Te i 7 ae acid ito Athina orepil j Ava Y ik pu 4 A cl Kypa IKUT Filiatra Ea mi a i 2 PEN wi a 2 ed A Bii gt Le we A cys z F Spetses 4 i r s VE IM Emitoal e r J k r e b i d E kh a e E e TF K gt y e E A e hh Ti j i Pyne i A an IEA i o ia i Lefkira A Ea e ae Haras Ye Illustration 17 Layer superimposed on Google Maps Google Maps provide a standard base map infrastructure with up to date information User may change the base map from Map to Satellite There is a Pan Button and a Zoom in Zoom out Bar At the top right the user may switch on off the selected layers or reduce layer transparency Automatically a pop up window will appear on the user s screen If a Legend is available for the selected layer the legend will appear on the pop up window otherwise the window will be empty Color Modification of Layer s color scheme User can modify the default layer s color scheme automatically or manually Automatically user can select from a series of predefined color pallets
26. llow the following steps A Open a windows explorer and navigate to the download folder A Open dem_map zip A Open Legend html Map in Report User can use any image viewer or image processing software to view the image file or even in a word processing software In an image viewer coordinates stored in the Final VERSION SMS application User Manual 31 georeference file will not provide any spatial information Legend can be opened in any browser Legend is stored in vector html format User can magnify legend without any loss of detail In the example below a map in word pad is shown User can incorporate map information in any report or document 5 EE Doc x Home View z Cut a X sl rim e 3 Find Calibri eju Aa E SE F Ey gt Ar Copy a Replace Paste B Z U de x7 2 Ax E Piture Paint Dateand Insert X drawing time object i0 Select all Clipboard Font Paragraph Insert Editing co Oe Oil Uo 1112131415161718 19 110 111112 113 1144951161171 a Digital Elevation Model Region Peloponnesus E s O HR 0 see O ODO a Pao am m Illustration 28 Map in a report Map in GIS User can import any map data in any GIS or CAD system since all map files have georeference Coordinates and all relative metadata are stored in the Geo TIFF In the following example a mapfile from region Peloponnesus is imported in ArcGIS amp Untitled
27. mnar attributes for each shape in dBase IV format Optional files A prj projection format the coordinate system and projection information a plain text file describing the projection using well known text format A sbn and sbx a spatial index of the features A fbn and fbx a spatial index of the features for shapefiles that are read only A ain and aih an attribute index of the active fields in a table or a theme s attribute table A ixs a geocoding index for read write shapefiles A mxs a geocoding index for read write shapefiles ODB format A atx an attribute index for the dbf file in the form of shapefile columnname atx ArcGIS 8 and later A shp xml geospatial metadata in XML format such as ISO 19115 or other schemas A cpg used to specify the code page only for dbf for identifying the character encoding to be used In each of the shp shx and dbf files the shapes in each file correspond to each other in sequence That is the first record in the shp file corresponds to the first record in the shx and dbffiles and so on The shp and shx files have various fields with different endianness so as an implementor of the file formats you must be very careful to respect the endianness of each field and treat it properly IMG Data Import IMG file format is a multiband format allowing storing many layers in one file By importing any multiband file in SMS each band will be import
28. models execute a model or delete it A In Model Upload Form section user can write a new model and submit it For further details please refer to G S Modeling in SMS pa Features of SMS Application SMS web application of a geographic information system based on GRASS GIS platform is basically a shell application allowing the user to query and manipulate a part of the database over the Internet and expand the capabilities of the application In this way SMS makes geographic information available to the citizens and users of each network at any time and from any location All citizens stakeholders and LRa s concerned will have easy access to the application and will be able to manage geographic data display of different layers etc and display and query the database In general there are following groups of functionality in the SMS application User Management User in order to have access to SMS functionality it is required to register providing limited information and contact details Registered users will be given a user name and a password for secure access to SMS application and also data storage in the SMS Server User management responsibility is preformed by the System Final VERSION SMS application User Manual 9 administrator SMS User Registration User registration requires the following fields to be completed by the user First and Last Name User s email address the Organization user represents the Mapset he
29. nd an else option write No Data if the condition is not satisfied The null function is a reserved word which inserts a No Data value for the actual raster cell being processed There are a couple of further functions available such as mean min max sin cos etc The map calculator can accept more than one input map New maps can be generated from calculations performed on a set of input maps Additionally adjacent values can be considered e g to generate ow through a landscape Final VERSION SMS application User Manual 38 Home Peloponnesus Models Model List demo_molel Show Delete Run my_watershed_demo Show Delete Run Aspect show Delete Run mydemo show Detete fun myls _Show _Detete _Run My_Hydro_Model _Show Delete Run select_over_1000m Show _Delete Run rmapealc ealey_ 1000 iffdem gt 1000 0 dem null Terraflow show Detete Run Illustration 35 View Model in Model List User from the Model List can view the model and can run the model The results are found in the Layers section under Location tab Home Peloponnesus Models Layers slope_ 3am E Illustration 36 Results In Layer Browser Final VERSION SMS application User Manual 39 Administrator Area Metadata Configuration Metadata is a type of metadata that is applicable to objects that have an explicit or implicit geographic extent in other words are associated wi
30. onncnacnnnos 30 GIS Modeling ISMS ida AA 32 Rastermap aNalvSIS a a o ini 33 SMS Model ntertatenacin a wlio ne eens 33 Digital elevation model DEM analysiS o ccccooocccnnonacononononocnonacnnnononanonos 33 Model help tHe 35 Ratera p alterar ao 36 Administrator Area curia 39 Metadata CONTSUaON ita 39 Graphical Administrator CONSOTE ccoonccnonocnnonaconnnnonononacononaronnnnnnononarononaronennnos 40 Part Bso Management Models adas 41 Final VERSION SMS application User Manual 2 SMS is a web based application SMS Soil Monitoring Software and was developed by EKPA in collaboration with CRA ABP The application supports all critical functions required for soil monitoring and management based on the soil monitoring methodology developed by CRA ABP The use of Information Technology and the web environment renders the aforementioned methodology fully operational at the level of Local and Regional Authorities LRAs In order to provide effective user support services EKPA has cooperated with CRA ABP to produce this user s manual This manual will contain information and instructions for the use of the application but also provides an analysis of customization needs along with the description of the processes required for adding on the application new monitoring features based on the specific characteristics of the application area e g new monitoring objects such as new thematic layers like for instance vege
31. rs watersheds of lines Slope aspect and curvature maps can be created and raster algebra can be performed SMS Model Interface In the Location tab under the Model tab there are two sections The Model List and the Model Upload Form In the next section examples of SMS scripting will be demonstrated Digital elevation model DEM analysis In SMS user can calculate slope and aspect from a DEM with rslope aspect command First user resets the current region settings to those of the input map then calculates slope and aspect command explanation link g region rast dem p ATEA CeNnitoN http grass fbk eu gdp ht ml grass64 g region html r slope aspect el dem as aspect_30m Parameter calculation htto erass fbk eu edp ht sl slope_30m ml grass64 r slope aspect html In the above table the two commands that will be used in the model are demonstrated In the Model Upload Form user can write in each line a command At the top user must provide a unique name for the model Final VERSION S M S aj plication User Manual Model Upload Form Please set model name Jdemo_molel Model steps 34 o region rast dem p r slope aspect el dem as aspect 30m sl slope 30m 1 2 3 A A E E 5 3 Illustration 30 Model Upload Form Both maps are calculated in one step Note that horizontal angles are counted counterclockwise from the East Slopes are calculated by default in degrees Home Peloponnesus
32. tation types new monitoring procedures such as the use of aerial photography etc In the first part the User Manual provides information on the use of SMS application In the second part a detailed section provides information for each model related to soil monitoring and management The web application is linked with the project s web portal which is designed as a facilitator of several other project activities such as the internal communication of project partners and the training application e course System Requil SMS is a Web based application The User side client requires a web browser The User side web application is designed for Microsoft Internet Explorer 6 0 or higher and Mozilla Firefox 2 0 or higher or Google Chrome All browsers are available for free Additional web browsers may work but have not been tested and are not Supported Your computer should also meet the minimum system requirements provided by the manufacturer of the browser you are using The web application will perform best on computers with a high speed internet connection similar to digital subscriber line DSL cable or faster It is not recommended for computers using dial up modem based internet connections SMS uses standard Google Maps as base map information Google Maps compiles base layer imagery from satellite and aerial photography data sources As sources range from one to three years old there is some variation in quality of images
33. th some position on the surface of the Globe Such objects may be stored in a geographic information system GIS or may simply be documents datasets images or other objects services or related items that exist in some other native environment but whose features may be appropriate to describe in a geographic metadata catalogue may also be known as a data directory data inventory etc Home Peloponnesus Sicily Login Register Administrator Area Easter Metadata LOCATION Delete USER Delete COMMENTS Delete SOURCE Delete SPATIAL RESOLUTION Delete DATE Delete W Vector Metadata LOCATION Delete Add Graphical 4 drunistraton Console Illustration 37 SMS administrator area In SMS application Administrator has the ability to create metadata catalogs for raster or vector data sets Simply administrator can add or remove fields from the metadata table Final VERSION SMS application User Manual 40 Graphical Administrator Console SMS is the front end of a web application Through the Admin tab SMS administrator has access to the core application Grass GIS Only users with gis experience on grass gis software can have access to the server side component By selecting Graphical Administrator Console user can enter the server ect Options Clipboard Send Ctrl Alt Del Refresh ESTI T E nr nore Disconn In amp EXA Ws File Confi
34. tored Data in the PERMANENT mapset can only be added modied or removed by the owner of the PERMANENT mapset however they can be accessed analyzed and copied into their own mapset by the other users The PERMANENT mapset is useful for providing general spatial data e g an elevation model accessible but write protected to all users who are working in the same location as the database owner To manipulate or add data to PERMANENT the owner would start GRASS and choose the relevant location and the PERMANENT mapset This mapset also contains the DEFAULT_WIND file which holds the default region boundary coordinate values for the location which all users will inherit when they start using the database Additionally a WIND file is kept in all mapsets for storing the current boundary coordinate values and the currently selected raster resolution Only the Database Administrator have the option of switching back to the default region at any time In the databases all data are stored in the local coordinate system For example for the Peloponnesus Region all data are in EGSA87 coordinate system SMS reprojects all data from the local coordinate system to world coordinate system and overlay Final VERSION SMS application User Manual 5 them on Google Maps base map infrastructure SMS uses a web server and a data server Web server provides access to World Wide Web and data storage server provides all functionality and security to data management
35. ugh yellow to blue A ryg red through yellow to green A sepia yellowish brown through to white A slope r slope aspect type slope colors for raster values 0 90 A srtm color palette for Shuttle Radar Topography Mission elevation A terrain global elevation color table covering 11000 to 8850m A wave color wave Final VERSION SMS application User Manual 23 a routs A Ahh mificas x roo E Satellite fea s A es ani ee y Etoliko if b eee ia Thiva Fi iniades y Dianav Newmaxrag ec 2 Rio e r EE lera Polis Elo Batessolsghiou decree yi Eso gen ina AN Laia Athina A y so l g 4 i P Y E Emi Tadi Illustration 19 Updated colormap For manual color selection user has to identify the number of classes and the corresponding legend text By selecting Color below the layer s thumbnail the Color Style Selection Tools initiates The following steps have to be taken Provide the number of ranges Select color using the interactive color selection tool for each class Provide a text description for each class Submit request A A A A SMS ap lication User Manual 24 Layers Colorstyle Selection Automatic aspect submit Manual Select number of ranges a a H feo agg G ros 5 les E 27 Wa essare essara value O color 83F1D3 __ name low value Bas oo color 440276 E name Medium value 671 color QT IF MM name
36. upport When initiated the welcome screen appears Final VERSION SMS application User Manual 7 Peloponnesus Sicily Login Register Admin Welcome to SOILPRO SMS SMS Soil Monitoring Software is a web based application developed by the University of Athens in collaboration with CRA ABP The application supports all critical functions required for soil monitoring and management based on the soil monitoring methodology developed by CRA ABP The use of Information Technology and the web environment renders the aforementioned methodology fully operational at the level of Local and Regional Authorities LRAs Project Description The project LIFEOS ENW IT 00428 SOILPRO began on ist January 2010 and will last four years until 31st December 2013 SOILPRO is a project financed among the LIFE Environment Policy and Governance projects The overall objective of the project is to halt soil degradation in EU Member States in line with the European Thematic Strategy for Soil Protection Illustration 2 SMS Welcome screen The Welcome screen in SMS application briefly informs visitors for the scope of SMS application and SoilPro Project The Life logo is in accordance to the Life funding provisions User may choose to which location to navigate As until today there are two locations in the SMS database Region of Peloponnesus Greece and Region Sicily Italy Not registered users may navigate in the application and browse available dat
37. ut ime file Show Delete Run Em oy apyeiou Aer ye vo gpyelo Help Upload Calo L factor Show Delete Run Em oy opyeiou As evel vo opyeio Help Upload Aspect Show Delete Run Em oy apyeiou Aer evel vwo opyelo Help Upload asp mati Show Delete Run Em oy aprelou Aer ever vo apyel o Help Upload ss factor Show Delete Run Em oy apyeiou Aer evel vwo ap ela Help Upload Illustration 33 Help file upload Raster map algebra SMS through GRASS provides the very powerful map calculator r mapcalc This module is best used on the model builder as there you have flexible cursor support provided by the shell It operates cell by cell using a moving window technology To start with some simple operations an example is provided to filter all pixels with elevation higher than 1000m from the Peloponessus DEM in a model r mapcalc elev_1000 if dem gt 1000 0 dem null In the Model Upload Form user can write in the command in a single line At the top user must provide a name for the model Final VERSION SMS application User Manual 37 Model Upload Form Please set model name select_over_1 000 Model steps 1 r mapcalc elev 1000 iffdem gt 1000 0 dem nullo Submit Illustration 34 Writing a model in Model Upload Form The command embedded in double quotes contains an if statement if higher than 1000m with a then option copy the pixel values a
38. vernance projects The o G peloponnesus soilprosms dyndns org 2 halt soil degradation in EU Member States in line wit r Gail Dra i ar Gail Dentaction Illustration 9 Drag amp Drop This procedure will take from several minutes up to 1 hour depending the available bandwidth and data volume All selected data will be transferred to the SMS data server in the selected location Data from one location will not be available to other locations For security reasons user is authorized to mount only one location in the data server Final VERSION SMS application User Manual 14 Data Upload SMS user can upload data through the application In the Location Tab at the last section user can upload data by using the Data Upload tool The tool works in two steps Data Upload EmiaAovA aprelou Kev ever vo op eio Upload Illustration 10 Data Upload Section In the first step user chooses a file to upload by clicking on the Choose File button A data browser will appear and user can navigate to the selected location Data Upload Em oy opyelou dem Upload Illustration 11 File selection Finally user must click on the Upload button and the data will be uploaded to the data server of SMS application Final VERSION SMS application User Manual 15 Data Upload EmAoyh ooyeiou dem Upload Metap ptw on Tou 6 fe Start m Windows Task M 1 SMS 1 Shared Documents d Address Book
39. wishes to work with and the UserType Please Refer to User Management Options Below or press Help for more information on user previliges Any user can download the latest version of the SMS user manual from the link below Peloponnesus Sicily Register Admin Welcome to the SOILPRO SMS registration form Please till in the details below and you will be contacted with your SOILPRO 3M5 account details First name FP Last name FP Email address FP Organization Mapset Peloponnesus y Usertype Regular Help Submit Mew users can download the SMS user manual here Illustration 5 Illustration 5 Register Tab By submitting his details user will receive by the system administrator a user name and a password by email User Management Options There are four different type of users in SMS application General Public A Can view data all locations A Can view models all locations A t is not necessary to register Regular User Final VERSION SMS application User Manual 10 A Can view data all locations A Can view models all locations A Can download data single location Power User A Can view data all locations Can view models all locations Can download data single location Can upload data single location Can delete data single location Can create models single location Can delete models single location A Can run models single location Admin A Has full access to all locations
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